isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000001	chr1	-	2391	1	Genic_Genomic	ENSMUSG00000033845.14	novel	NA	NA	NA	NA	10115	1	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAAACTCTCCCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4845818	4843427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_4843400_4845800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000002	chr1	-	1292	3	ISM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	3042	244	3042	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCTGTGGATTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	4852891	4843672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_4844740_4847747_4847872_4852790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000003	chr1	-	2776	4	ISM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	1633	1261	1604	-1261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCAATACACATAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	4854329	4844694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000004	chr1	-	1032	1	Genic_Genomic	ENSMUSG00000033845.14	novel	NA	NA	NA	NA	3459	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATAAGAGTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4852474	4851442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_4851400_4852500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000005	chr1	+	1581	3	ISM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	31561	478	31473	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGTACAAATATTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	4909606	4916484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_4909712_4911178_4911356_4915185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000006	chr1	+	1318	1	ISM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	37599	0	37511	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4915644	4916962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_4915600_4917000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000007	chr1	+	1835	4	ISM	ENSMUSG00000033813.16	ENSMUST00000165720.3	2854	10	33876	94	33876	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAGTTTAAAAGTAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	4962136	4968038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_4962293_4963639_4963787_4965156_4965229_4966578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000008	chr1	+	1483	1	Genic_Genomic	ENSMUSG00000033813.16	novel	NA	NA	NA	NA	38391	2	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTGTCTTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4966651	4968134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_4966700_4968100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000009	chr1	-	951	1	Genic_Genomic	ENSMUSG00000002459.18	novel	NA	NA	NA	NA	108212	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTGGATATTTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	4980746	4979795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_4979800_4980700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000010	chr1	-	946	2	ISM	ENSMUSG00000002459.18	ENSMUST00000119256.8	883	5	106363	-626	106363	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACGTACGTGTATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4982595	4979998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_4980886_4982536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000011	chr1	+	441	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	-69	73311	5	-73232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAATCCTTACTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	5153307	5159331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5153502_5154639_5154787_5159231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000012	chr1	+	343	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	1261	68966	1261	-68887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGTGATATACTAACCA	NA	NA	NA	NA	NA	NA	NA	NA	5154637	5163676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5154787_5159231_5159335_5163585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000013	chr1	+	289	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	5855	66709	5855	-66630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTACTGTTCATATGGT	NA	NA	NA	NA	NA	NA	NA	NA	5159231	5165933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5159335_5163585_5163676_5165837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000014	chr1	+	297	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	10205	64302	10205	-64223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTGAGTTCACAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	5163581	5168340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5163676_5165837_5165952_5168251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000015	chr1	+	272	3	ISM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	12533	61409	12459	-61220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAAGTATGTTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	5165835	5171343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5165952_5168251_5168357_5171292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000016	chr1	+	259	3	ISM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	14947	45042	14873	-44853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGTGCCCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	5168249	5187710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5168357_5171292_5171347_5187612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000017	chr1	+	347	3	ISM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	17988	38060	17914	-37871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCTCAGTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	5171290	5194692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5171347_5187612_5187711_5194499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000018	chr1	+	499	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	41122	26482	41122	-26403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTAGGATCCCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	5194498	5206160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5194693_5203306_5203486_5206034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000019	chr1	+	368	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	49970	18567	49970	-18488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGACAAGGACAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	5203346	5214075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5203486_5206034_5206161_5213972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000020	chr1	+	357	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	52655	12346	52655	-12267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATCTCACCTGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	5206031	5220296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5206161_5213972_5214075_5220170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000021	chr1	+	492	3	ISM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	60592	43	60592	36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTCTTTATGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	5213968	5232599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_5214075_5220170_5220285_5232327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000022	chr1	+	319	1	Genic_Genomic	ENSMUSG00000033793.13	novel	NA	NA	NA	NA	79061	4	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGATGATGAGAAGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5232437	5232756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_5232400_5232800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000023	chr1	+	658	1	FSM	ENSMUSG00000104046.2	ENSMUST00000193241.2	2279	1	1623	-2	1623	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCCTGGTCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	5379584	5380242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_5379600_5380200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000024	chr1	+	372	4	FSM	ENSMUSG00000087247.4	ENST00000523939.1	358	4	1	-15	1	15	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATGTTTAGTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	6429566	6464558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_6429739_6458796_6458851_6459663_6459745_6464493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000025	chr1	+	548	3	ISM	ENSMUSG00000087247.4	ENST00000358543.9	884	5	30127	80	30127	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTAATTTGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	6459692	6464917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_6459745_6461263_6461336_6464493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000026	chr1	+	516	1	Genic_Genomic	ENSMUSG00000087247.4	novel	NA	NA	NA	NA	34928	12	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGGAAACCTGACAAATG	NA	NA	NA	NA	NA	NA	NA	NA	6464493	6465009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_6464500_6465000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000027	chr1	+	3741	5	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	31345	1123	31345	-1123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGGGAGCAACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	7190488	7242729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000028	chr1	+	3707	1	ISM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	81002	0	81002	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTGAGGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	7240145	7243852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_7240100_7243900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000029	chr1	-	612	1	NIC	ENSMUSG00000025909.17	novel	4165	20	NA	NA	440307	32	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACCTCAAAGACAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	8433860	8433248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_8433200_8433900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000030	chr1	-	673	3	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	358877	67	358865	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCCTATCATTGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	8515302	8433347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_8433858_8484426_8484538_8515250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000031	chr1	-	293	3	ISM	ENSMUSG00000025909.17	ENST00000517473.5	1486	16	355945	21	355915	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGACATGCTGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	8518252	8433706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_8433858_8515250_8515344_8518203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000032	chr1	-	601	5	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	179073	84923	179061	-2982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGTCTGTGGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	8695106	8518203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_8518357_8653428_8653559_8665635_8665767_8677293_8677377_8695002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000033	chr1	-	246	3	ISM	ENSMUSG00000025909.17	ENST00000643809.1	1007	10	338461	3037	338431	-3037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGGAACGAGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	8535736	8518258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_8518357_8533617_8533690_8535660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000034	chr1	-	159	3	ISM	ENSMUSG00000025909.17	ENSMUST00000115488.3	1554	17	121914	314462	121914	-232939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGCATTTCATCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	8752253	8748160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_8748205_8749296_8749355_8752196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000035	chr1	+	2055	1	FSM	ENSMUSG00000061024.9	ENSMUST00000072079.9	2048	1	-3	-4	-3	4	mono-exon	FALSE	NA	NA	NA	NA	NA	678	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTATTTTTGTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	9615629	9617684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_9615600_9617700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000036	chr1	-	363	3	ISM	ENSMUSG00000025912.17	ENST00000517885.5	1703	12	28160	-1	27785	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCTTTACTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	9742464	9740082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_9740238_9741803_9741984_9742436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000037	chr1	-	338	3	ISM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	26808	2675	26808	-2353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTAAAGAATTCATATA	NA	NA	NA	NA	NA	NA	NA	NA	9743441	9742436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_9742542_9742764_9742882_9743325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000038	chr1	-	386	3	ISM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	23930	3564	23930	-3242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATACTCTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	9746319	9743325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_9743441_9743969_9744113_9746191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000039	chr1	-	503	3	ISM	ENSMUSG00000025912.17	ENST00000517885.5	1703	12	105	22894	-85	-22894	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGATTGGACTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	9770519	9762977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_9763015_9763511_9763618_9770159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000040	chr1	-	170	1	ISM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	1990	0	1095	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGGACTTTTTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	10012353	10012183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_10012200_10012400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000041	chr1	-	556	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	233	27	233	-27	multi-exon	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATAAATAAACAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	10013215	10012274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_10012381_10012547_10012617_10012834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000042	chr1	-	220	3	ISM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	12	408	12	-344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTGGGAGCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	10014331	10012591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_10012617_10012834_10012943_10014244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000043	chr1	-	444	1	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	13083	0	13083	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCTGACTGGCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	10095269	10094825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_10094800_10095300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000044	chr1	-	801	4	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	5701	11	5701	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGACTTCAGAGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	10102651	10094836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000045	chr1	-	493	4	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	2964	7761	2964	-7761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGGCGTGCACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	10105388	10102586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_10102650_10103482_10103549_10104232_10104362_10105153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000046	chr1	-	861	4	ISM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	28	8656	28	-8656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGGATGGAGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10108324	10103481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_10103549_10104232_10104362_10105153_10105389_10107894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000047	chr1	+	465	3	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	139	62303	61	-62303	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAATTCAAGGTATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	12788813	12856363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_12789123_12798817_12798913_12856302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000048	chr1	+	539	3	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	67633	51437	67555	-51437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACATGACGTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	12856307	12867229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_12856376_12856691_12856923_12866989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000049	chr1	+	446	3	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	103521	9983	103443	-9983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTACCACCAAGGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	12892195	12908683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_12892324_12906336_12906554_12908582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000050	chr1	+	436	3	ISM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	124193	0	124115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGACATTGGTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	12912867	12918666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_12913049_12918318_12918462_12918554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000051	chr1	+	461	1	ISM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	168455	0	142203	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCGTTTCAGAGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	12930955	12931416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_12931000_12931400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000052	chr1	-	950	5	ISM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	1734	5306	196	-5306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGTTGCTGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	13195653	13188986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000053	chr1	-	1218	1	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	23995	0	23995	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTATTTTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	13636139	13634921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_13634900_13636100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000054	chr1	-	1465	3	ISM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	19860	507	19860	-507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCTGTATAAAACATATT	NA	NA	NA	NA	NA	NA	NA	NA	13640274	13635428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_13636621_13639694_13639856_13640162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000055	chr1	-	965	1	Genic_Genomic	ENSMUSG00000025937.7	novel	NA	NA	NA	NA	36253	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTGTGAACTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	13694517	13693552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_13693600_13694500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000056	chr1	-	998	2	ISM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	33122	2646	33122	-2646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAGTTGATCATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	13697648	13696199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_13697129_13697579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000057	chr1	+	1567	4	FSM	ENSMUSG00000067813.4	ENST00000408926.8	1568	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTGCTGAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	13742353	13771774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_13742509_13742591_13742989_13754279_13754499_13770978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000058	chr1	-	145	2	ISM	ENSMUSG00000025932.15	ENSMUST00000190337.7	2199	17	119887	13780	119887	-13780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGCGGAAACTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	14254907	14254646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_14254734_14254849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000059	chr1	-	1164	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGGAGTCTTTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	16174886	16171517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000060	chr1	+	1194	2	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	25310	1370	25310	-1370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTCTGTATCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	16201307	16202588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_16201431_16201517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000061	chr1	+	1120	1	ISM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	26841	0	26841	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTGTCTTTCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	16202838	16203958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_16202800_16204000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000062	chr1	-	1632	1	NIC	ENSMUSG00000025920.20	novel	3030	14	NA	NA	173289	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGATTCATATAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	16416146	16414514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_16414500_16416100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000063	chr1	-	2181	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTTTCTATGACAATG	NA	NA	NA	NA	NA	NA	NA	NA	16689713	16640005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000064	chr1	-	434	1	ISM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	14726	0	14726	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGCACTTGGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	16712382	16711948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_16711900_16712400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000065	chr1	-	720	1	NIC	ENSMUSG00000079658.10	novel	2014	4	NA	NA	13402	4	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTTTATTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	16713706	16712986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_16713000_16713700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000066	chr1	-	740	2	NNC	ENSMUSG00000079658.10	novel	960	4	NA	NA	11166	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGTTTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	16715942	16712990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_16713698_16715909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000067	chr1	-	913	3	ISM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	9031	0	8873	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGTTTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	16718235	16712990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_16713703_16715909_16716054_16718178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000068	chr1	-	803	2	NNC	ENSMUSG00000079658.10	novel	2014	4	NA	NA	11054	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGAAATTTCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	16716054	16713043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_16713698_16715905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000069	chr1	+	1616	3	FSM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	20	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTATGTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	16735450	16748419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_16735730_16737888_16737998_16747191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000070	chr1	+	733	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	20	957	20	-877	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTAAACCCTGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	16735453	16747542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_16735730_16737891_16737998_16747191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000071	chr1	+	1311	1	Genic_Genomic	ENSMUSG00000025940.7	novel	NA	NA	NA	NA	11757	2	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTTGTTTGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	16747190	16748501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_16747200_16748500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000072	chr1	+	811	4	ISM	ENSMUSG00000025777.9	ENST00000434412.3	1156	7	11482	501	11482	-501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTTAGCCTTGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	17227212	17231805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_17227359_17228632_17228728_17230147_17230263_17231350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000073	chr1	+	609	2	ISM	ENSMUSG00000025777.9	ENST00000434412.3	1156	7	15638	-1	15638	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCAGAACAGAGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	17231368	17232307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_17231804_17232133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000074	chr1	+	1787	6	FSM	ENSMUSG00000067780.4	ENST00000649643.1	1785	6	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATATTTTCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	17672123	17695995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_17672267_17672769_17673109_17690006_17690126_17691624_17691758_17691870_17691987_17695058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000075	chr1	-	704	4	ISM	ENSMUSG00000041779.6	ENST00000182527.4	1467	12	74912	1131	74910	-1131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGAGTTTTCTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	21074543	21071557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000076	chr1	+	579	1	NIC	ENSMUSG00000025933.16	novel	1168	5	NA	NA	10927	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCATTCATTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	21299812	21300391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_21299800_21300400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000077	chr1	+	602	3	ISM	ENSMUSG00000026156.9	ENST00000615536.1	2159	4	72	1564	72	-1564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTCAGCTCCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	23801787	23884104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_23802094_23854301_23854447_23883953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000078	chr1	-	298	2	Antisense	novelGene_ENSMUSG00000026156.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAAAGGGAAAAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	23884104	23854300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_-_23854444_23883949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000079	chr1	+	452	3	ISM	ENSMUSG00000026156.9	ENST00000615536.1	2159	4	52677	1238	52677	-1238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAACTGGAAGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23854392	23884430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_23854447_23883953_23884103_23884181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000080	chr1	-	281	1	ISM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	76412	0	63784	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTATTTGTGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23884986	23884705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_23884700_23885000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000081	chr1	-	547	2	ISM	ENSMUSG00000026155.14	ENSMUST00000129254.8	1365	10	61144	3	61144	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACCGTGTTGGTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	23887626	23885379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_23885645_23887344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000082	chr1	+	270	1	ISM	ENSMUSG00000026156.9	ENSMUST00000063663.6	5655	4	84398	2565	83689	6	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACCCTCTTTTCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	23885404	23885674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_23885400_23885700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000083	chr1	-	561	3	ISM	ENSMUSG00000026155.14	ENSMUST00000129254.8	1365	10	56138	2010	56138	-2010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGCCACAAGCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	23892632	23887386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_23887653_23888383_23888550_23892503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000084	chr1	-	286	4	ISM	ENSMUSG00000026155.14	ENSMUST00000129254.8	1365	10	17787	19921	17787	-19921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACGTTTCTTTTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	23930983	23905297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_23905379_23915454_23915531_23916789_23916876_23930940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000085	chr1	-	365	2	ISM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	49	46235	49	-45564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACATTACTTTAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	23961349	23930940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_23931075_23961118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000086	chr1	-	683	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATTTTATTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	24044735	24035017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_24035442_24042237_24042388_24044626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000087	chr1	+	768	5	NNC	ENSMUSG00000026147.17	novel	773	5	NA	NA	15	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCCTGGTCAGATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	24218379	24278395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_24218447_24218555_24218689_24224118_24224516_24233763_24233848_24278308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000088	chr1	-	350	1	FSM	ENSMUSG00000101939.2	ENSMUST00000188299.2	345	1	-1	-4	-1	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGTAATTAGTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24652201	24651851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_24651900_24652200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000089	chr1	-	783	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	2	-2	2	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	24653050	24652267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_24652300_24653000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000090	chr1	-	425	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	256	-3	256	3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCCACCAAACTCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	24653476	24653051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_24653100_24653500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000091	chr1	-	449	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	235	-3	235	3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACTATGAAGCTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	24654411	24653962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_24654000_24654400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000092	chr1	+	2999	3	ISM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	70168	0	69872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGACTAATGAACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	24787878	24804529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_24787960_24801272_24801365_24801703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000093	chr1	+	2827	1	NIC	ENSMUSG00000073725.9	novel	4453	16	NA	NA	83696	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGACTAATGAACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	24801702	24804529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_24801700_24804500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000094	chr1	-	153	1	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAATAAATCTAAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	28619510	28619357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr1_-_28619400_28619500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000095	chr1	-	2337	1	ISM	ENSMUSG00000026064.17	ENSMUST00000232841.2	4236	6	6671	0	6671	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTTCTGCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	30981719	30979382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_30979400_30981700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000096	chr1	-	2491	3	ISM	ENSMUSG00000026064.17	ENSMUST00000232841.2	4236	6	4643	737	4643	-737	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGCATAGTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	30983747	30980119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_30982405_30983012_30983088_30983616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000097	chr1	+	254	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAGCTATGTGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	31204281	31204535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr1_+_31204300_31204500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000098	chr1	-	357	1	Genic_Genomic	ENSMUSG00000042215.9	novel	NA	NA	NA	NA	11902	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGCATTGGCCATTATT	NA	NA	NA	NA	NA	NA	NA	NA	33784920	33784563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_33784600_33784900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000099	chr1	-	661	3	FSM	ENSMUSG00000042215.9	ENSMUST00000044691.9	1860	3	8	1191	8	127	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTAGAGCATGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	33796868	33785755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_33786098_33787297_33787408_33796659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000100	chr1	+	1716	2	ISM	ENSMUSG00000026131.21	ENST00000370765.11	8776	24	14379	4465	14365	-4465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAGTCAAAACCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	34213775	34218491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_34213877_34216876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000101	chr1	+	2220	2	ISM	ENSMUSG00000026131.21	ENST00000370765.11	8776	24	19599	1105	19585	-1105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCCTGATAGAGCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34218995	34221851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_34219580_34220215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000102	chr1	+	1673	1	ISM	ENSMUSG00000026131.21	ENSMUST00000183302.6	8788	24	21875	27	21875	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTAACCTGTGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	34221285	34222958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_34221300_34223000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000103	chr1	-	1704	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTCTCATTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	34478752	34475750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000104	chr1	+	710	2	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	4366	4342	4366	-4342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTATGGCTGGTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	34483297	34484095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_34483351_34483438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000105	chr1	+	709	1	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	8797	0	8797	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGAGGTTGGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	34487728	34488437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_34487700_34488400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000106	chr1	-	1400	2	ISM	ENSMUSG00000037503.13	ENSMUST00000170092.8	941	7	24933	-1195	24933	1195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAAAAGTTCTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	34857112	34855120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_34856486_34857077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000107	chr1	+	790	2	ISM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	19306	1988	19306	-1988	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGCTGCTCAGGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	34908378	34916673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_34908487_34915991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000108	chr1	+	742	1	ISM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	28847	0	28847	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	34917919	34918661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_34917900_34918700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000109	chr1	+	154	2	ISM	ENSMUSG00000037408.11	ENSMUST00000153128.2	4547	7	26462	10268	26462	-10268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGGCTGCTCATCGC	NA	NA	NA	NA	NA	NA	NA	NA	36537162	36537577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_36537215_36537475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000110	chr1	+	160	2	ISM	ENSMUSG00000037408.11	ENSMUST00000153128.2	4547	7	34105	2251	34105	-2251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGAGCTGCCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	36544805	36545594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_36544861_36545489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000111	chr1	-	2067	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGTGTGGCGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	36586484	36577174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000112	chr1	+	343	3	ISM	ENSMUSG00000061518.12	ENSMUST00000081180.7	625	4	4	924	4	-924	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTACCTCCAAAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	36730533	36731543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_36730771_36731291_36731366_36731511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000113	chr1	+	868	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTAAAAATTCTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	36730564	36732765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000114	chr1	+	670	3	ISM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	717	-1	717	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCTAAAAATTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36731281	36732763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_36731366_36731531_36731632_36732277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000115	chr1	+	485	1	ISM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	1713	0	1713	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCTAAAAATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36732277	36732762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_36732300_36732800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000116	chr1	-	700	1	Genic_Genomic	ENSMUSG00000037351.10	novel	NA	NA	NA	NA	11196	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAGTAAATATAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	36737893	36737193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_36737200_36737900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000117	chr1	-	950	4	ISM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	8700	1393	8700	-1393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGGGCAGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	36740389	36738587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000118	chr1	-	674	5	ISM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	7823	2422	7823	-2422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGAGAACCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36741266	36739616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000119	chr1	+	1284	2	ISM	ENSMUSG00000026114.15	ENST00000436404.6	1846	5	16208	113	16208	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCGTCCCTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	37297119	37301000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_37297181_37299777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000120	chr1	+	1246	1	ISM	ENSMUSG00000026114.15	ENSMUST00000195272.6	2197	7	42408	152	18956	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGGTGTTGTGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	37299867	37301113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_37299900_37301100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000121	chr1	-	1657	1	Genic_Genomic	ENSMUSG00000026112.8	novel	NA	NA	NA	NA	11364	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCTGTTTCAAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	37457820	37456163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_37456200_37457800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000122	chr1	-	1830	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	99	1934	99	-1934	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAACGTTTCATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	37469085	37458098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_37459709_37467422_37467507_37468949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000123	chr1	+	1062	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	35	-3	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	37469254	37478068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000124	chr1	+	378	2	ISM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	107	7671	75	-7531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTACCTGTTTACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	37469357	37470534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_37469575_37470373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000125	chr1	+	204	1	Genic_Genomic	ENSMUSG00000026111.16	novel	NA	NA	NA	NA	8723	4	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCAAGCGGTATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	37478005	37478209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_37478000_37478200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000126	chr1	-	755	1	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	99854	0	99853	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTGACTGTGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	37794602	37793847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37793800_37794600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000127	chr1	-	657	2	ISM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	94327	198	94326	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTCGGGGCACACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37800129	37794045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37794603_37800029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000128	chr1	-	371	3	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	71471	631	71471	-631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGGGACAGAACGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	37822984	37800534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37800616_37802387_37802591_37822897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000129	chr1	-	594	3	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	53467	2491	53467	-2491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATGTGAGCTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	37840988	37802394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37802591_37822897_37823108_37840800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000130	chr1	-	509	3	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	50633	22994	50633	-22994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAATGCATTTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	37843822	37822897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37823108_37840800_37840987_37843709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000131	chr1	-	280	2	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	48267	43808	48267	27772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACACAGAGACAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37846188	37843711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37843821_37846017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000132	chr1	-	362	3	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	21099	54708	21099	16872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTGAGGCTGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	37873356	37854611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37854768_37858605_37858722_37873266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000133	chr1	-	330	3	ISM	ENSMUSG00000060771.16	ENSMUST00000114902.8	2724	18	19780	73436	19780	12	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATTAGCAAGAAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	37874675	37873339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37873419_37874338_37874417_37874502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000134	chr1	-	329	2	ISM	ENSMUSG00000060771.16	ENSMUST00000193669.2	1981	8	24415	1153	14716	-1153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGTCAGTGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	37879739	37874504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37874674_37879579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000135	chr1	-	347	2	ISM	ENSMUSG00000060771.16	ENSMUST00000193669.2	1981	8	9698	14960	0	-14960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTAAATTTACCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	37894456	37888311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_37888528_37894325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000136	chr1	+	686	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	53	746	53	-746	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCCCTTCCGCTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	37911339	37914563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_37911407_37913944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000137	chr1	+	667	1	ISM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	3356	0	3356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	37914642	37915309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_37914600_37915300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000138	chr1	+	835	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	-1	-172	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGTCAGTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	37929611	37937617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000139	chr1	-	362	1	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	11765	0	10295	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTTCTCTGTTTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	38024631	38024269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_38024300_38024600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000140	chr1	-	1697	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATGTCTGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	38036971	38026473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000141	chr1	-	368	2	ISM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	34	10458	34	-8004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGCAGAAACAAGTAACC	NA	NA	NA	NA	NA	NA	NA	NA	38036362	38034727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_38034923_38036189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000142	chr1	+	4235	3	ISM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	52222	-5	52222	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGACCCTCGGCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	38089312	38094665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_38089407_38090203_38090366_38090686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000143	chr1	+	3980	1	Genic_Genomic	ENSMUSG00000026083.13	novel	NA	NA	NA	NA	53594	4	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGACCCTCGGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	38090684	38094664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_38090700_38094700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000144	chr1	+	2558	4	ISM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	50	1849	50	-1849	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGACGCTGATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	39024738	39034470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000145	chr1	+	1055	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAACATGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	39406920	39410996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000146	chr1	+	1047	5	NNC	ENSMUSG00000073702.12	novel	1049	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGTTTGAACATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	39406922	39410992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_39407016_39407229_39407335_39409094_39409221_39410034_39410148_39410382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000147	chr1	+	1048	5	NNC	ENSMUSG00000073702.12	novel	1049	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGTTTGAACATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	39406927	39410992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410152_39410382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000148	chr1	+	695	4	FSM	ENSMUSG00000073702.12	ENSMUST00000194746.6	703	4	2	6	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTCAGGGTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	39406960	39410441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000149	chr1	+	308	3	ISM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	4	1224	4	-1224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAGTTACTTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	39407013	39409221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_39407088_39407229_39407337_39409094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000150	chr1	+	357	2	ISM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	101	1220	101	-1220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTACTTGGTGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	39407110	39409225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_39407337_39409094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000151	chr1	-	359	1	NIC	ENSMUSG00000057173.9	novel	1649	11	NA	NA	52880	0	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTCTTGCCTCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	39704819	39704460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_39704500_39704800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000152	chr1	-	626	2	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	47955	44	47955	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGAATTGTATTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	39709744	39704506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_39704818_39709429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000153	chr1	-	311	2	NNC	ENSMUSG00000057173.9	novel	1649	11	NA	NA	48081	-43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTCAGAAAACACGTATT	NA	NA	NA	NA	NA	NA	NA	NA	39709618	39704686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_39704809_39709429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000154	chr1	-	683	4	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	37539	4967	37539	-4786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAGAAACCCACACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	39720160	39709429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_39709744_39711345_39711461_39717816_39717912_39720001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000155	chr1	-	352	4	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	35570	6959	35570	-6778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTTCAACTGAAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	39722129	39711421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_39711461_39717816_39717912_39720001_39720159_39722068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000156	chr1	-	484	4	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	32929	15538	32929	-15357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCTCCTTCACACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	39724770	39720000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_39720159_39722068_39722128_39722759_39722911_39724654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000157	chr1	-	433	4	ISM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	28335	18297	28335	-18116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGTTCCACACAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	39729364	39722759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_39722911_39724654_39724769_39727756_39727811_39729250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000158	chr1	-	364	4	ISM	ENSMUSG00000057173.9	ENST00000428343.6	1649	11	7	20224	7	-20041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGATGCTATGACATGCA	NA	NA	NA	NA	NA	NA	NA	NA	39757692	39724684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_39724769_39727756_39727811_39729250_39729362_39757577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000159	chr1	+	192	2	ISM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	75198	44073	75198	-44073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAACTTGGTAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	40015865	40019799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_40015978_40019719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000160	chr1	+	227	2	ISM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	115613	5075	115613	-5075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGGGCGACTTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	40056280	40058797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_40056414_40058703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000161	chr1	+	1433	3	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	121940	-360	121940	360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCCTGTCTATGACAG	NA	NA	NA	NA	NA	NA	NA	NA	40062607	40065009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_40062680_40063469_40063610_40063788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000162	chr1	+	155	1	ISM	ENSMUSG00000026074.16	ENSMUST00000168431.7	5632	30	123892	1351	123297	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTCCACCATCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	40063964	40064119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_40064000_40064100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000163	chr1	+	1402	1	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	123580	0	123580	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTACAGCATGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	40064247	40065649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_40064200_40065600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000164	chr1	+	462	3	FSM	ENSMUSG00000079588.4	ENST00000488134.5	452	3	-6	-4	-6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACACTCCCCCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	40845251	40894211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_40845359_40846781_40846881_40893955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000165	chr1	+	453	3	NNC	ENSMUSG00000079588.4	novel	452	3	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCACCACACTCCCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	40845252	40894208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_40845354_40846781_40846881_40893955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000166	chr1	+	448	3	NNC	ENSMUSG00000079588.4	novel	452	3	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACACTCCCCCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	40845257	40894211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_40845359_40846789_40846881_40893955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000167	chr1	+	452	3	NNC	ENSMUSG00000079588.4	novel	452	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCACCACACTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	40845261	40894207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_40845359_40846781_40846885_40893955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000168	chr1	+	252	1	ISM	ENSMUSG00000079588.4	ENSMUST00000114765.4	2716	5	49195	1840	48698	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCACCACACTCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	40893955	40894207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_40894000_40894200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000169	chr1	-	707	2	NNC	ENSMUSG00000100180.2	novel	703	3	NA	NA	0	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGTTTTGGAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	42394787	42363735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_42364251_42394595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000170	chr1	+	283	2	FSM	ENSMUSG00000041907.10	ENST00000436841.1	280	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAGATCGCAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	42992328	42992849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_42992394_42992631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000171	chr1	+	233	1	Genic_Genomic	ENSMUSG00000041907.10	novel	NA	NA	NA	NA	295	10	mono-exon	FALSE	NA	NA	NA	NA	NA	1127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCAAGTGAGAGCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	42992625	42992858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_42992600_42992900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000172	chr1	-	843	3	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	22382	21	22382	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGCATCTGGGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	43092733	43088743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_43088996_43090717_43091146_43092570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000173	chr1	-	818	2	ISM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	60	21920	60	-21920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCCTGCAGGACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	43115055	43110642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_43110816_43114410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000174	chr1	+	3458	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCAGGCCTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	43137869	43155107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000175	chr1	-	1567	6	FSM	ENSMUSG00000008136.15	ENSMUST00000008280.14	1563	6	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTGGACTAATGATTA	NA	NA	NA	NA	NA	NA	NA	NA	43203123	43162231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_43162826_43167403_43167591_43170811_43170982_43180857_43181033_43192235_43192415_43202861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000176	chr1	-	1550	6	NNC	ENSMUSG00000008136.15	novel	1563	6	NA	NA	11	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTGTGGACTAATGATT	NA	NA	NA	NA	NA	NA	NA	NA	43203110	43162232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_43162826_43167406_43167591_43170811_43170982_43180857_43181033_43192235_43192415_43202861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000177	chr1	+	622	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	3	-142	3	142	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGATGTGTTATTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	43228318	43228940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_43228300_43228900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000178	chr1	+	1089	2	ISM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	108293	818	108293	-818	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATGTAGTGAATATGT	NA	NA	NA	NA	NA	NA	NA	NA	43593203	43608857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_43593743_43608307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000179	chr1	-	371	1	ISM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	80464	0	80428	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTAATGGTGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	43786496	43786125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_43786100_43786500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000180	chr1	-	391	2	ISM	ENSMUSG00000057363.13	ENST00000283148.12	2033	15	73943	545	73943	-545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCTCCCTTGAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	43792981	43789236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_43789523_43792876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000181	chr1	+	174	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTACTTAATGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	43928713	43928887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr1_+_43928700_43928900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000182	chr1	+	245	1	ISM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	68720	0	68712	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTATAAATAAAAGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	44041886	44042131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_44041900_44042100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000183	chr1	-	940	5	FSM	ENSMUSG00000026049.12	ENST00000376029.3	938	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTTGTTTTACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44141618	44125771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_44126224_44127635_44127688_44130520_44130752_44139007_44139082_44141487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000184	chr1	-	1092	4	ISM	ENSMUSG00000026049.12	ENST00000376019.5	1573	5	8279	0	8279	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	44130903	44125772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000185	chr1	-	1117	4	ISM	ENSMUSG00000026049.12	ENST00000376019.5	1573	5	5	1230	5	-976	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTGGAACTCTATATT	NA	NA	NA	NA	NA	NA	NA	NA	44139177	44127002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_44127209_44127635_44127688_44130520_44130908_44138705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000186	chr1	-	331	2	ISM	ENSMUSG00000101104.7	ENSMUST00000148542.8	571	6	2170	15422	2170	-15422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44147035	44146044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_44146265_44146924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000187	chr1	-	222	1	NIC	ENSMUSG00000101104.7	novel	571	6	NA	NA	2939	-15422	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44146266	44146044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_44146000_44146300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000188	chr1	-	433	2	ISM	ENSMUSG00000026047.14	ENST00000376004.5	1752	10	5653	3866	5653	-3864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATGATGCAGAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	44152043	44149910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_44150105_44151804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000189	chr1	-	382	2	ISM	ENSMUSG00000026047.14	ENST00000376004.5	1752	10	5358	5792	5358	-5790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACACATTTCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44152338	44151836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_44152043_44152162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000190	chr1	-	356	3	ISM	ENSMUSG00000026047.14	ENST00000376004.5	1752	10	3729	6127	3729	-6125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGGCCGGTGAGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	44153967	44152171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_44152336_44153600_44153679_44153853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000191	chr1	-	633	3	ISM	ENSMUSG00000026047.14	ENST00000376004.5	1752	10	4	7807	4	-7805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATGATTGAGGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44157692	44153851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_44154060_44156197_44156404_44157473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000192	chr1	+	1383	3	ISM	ENSMUSG00000041684.12	ENST00000257336.6	2634	10	15520	-1	15520	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAATTTTAATGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	44180936	44183678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_44181035_44182008_44182637_44183021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000193	chr1	+	430	2	ISM	ENSMUSG00000026048.17	ENSMUST00000027214.4	3907	15	16166	14094	16166	-14094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTTGGAAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	44203172	44206326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_44203245_44205968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000194	chr1	+	418	1	ISM	ENSMUSG00000026048.17	ENSMUST00000027214.4	3907	15	32996	0	32996	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTATCCATATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	44220002	44220420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_44220000_44220400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000195	chr1	+	1020	7	FSM	ENSMUSG00000056870.10	ENST00000409637.7	1024	7	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTCTTTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44591732	44805648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_44591869_44609997_44610121_44728322_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000196	chr1	+	1552	1	FSM	ENSMUSG00000103071.2	ENSMUST00000194594.2	1551	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGCAGGTCATATATA	NA	NA	NA	NA	NA	NA	NA	NA	44796102	44797654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_44796100_44797700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000197	chr1	+	1237	5	ISM	ENSMUSG00000056870.10	ENST00000409805.5	643	6	64650	-652	64650	652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCTAACATCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	44812424	44834896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000198	chr1	+	822	1	ISM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	244506	0	87402	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGATATGCTCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	44835176	44835998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_44835200_44836000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000199	chr1	+	423	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	71	28011	71	-28011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTCTGTAGAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	45350768	45360855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45350993_45360656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000200	chr1	+	342	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	9957	27212	9957	-27212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCATGTCCAACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	45360654	45361654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45360857_45361101_45361153_45361565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000201	chr1	+	247	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	10867	24290	10867	-24290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCATTCTTTTTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45361564	45364576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45361680_45362882_45362958_45364519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000202	chr1	+	184	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	12185	23847	12185	-23847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAACACTTGAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	45362882	45365019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45362958_45364519_45364574_45364964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000203	chr1	+	186	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	17337	19112	17337	-19112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGTGCTAAGGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	45368034	45369754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45368082_45368212_45368267_45369262_45369308_45369714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000204	chr1	+	254	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	17514	18501	17514	-18501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTAGCATATAAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	45368211	45370365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45368267_45369262_45369308_45369714_45369769_45370265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000205	chr1	+	237	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	18572	18144	18572	-18144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAAGCTGCCCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	45369269	45370722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45369308_45369714_45369769_45370265_45370365_45370676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000206	chr1	+	243	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	19566	17932	19566	-17932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAAGTTCGTCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	45370263	45370934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45370365_45370676_45370722_45370837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000207	chr1	+	236	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	20166	17463	20166	-17463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTCCATTTTTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	45370863	45371403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45370937_45371132_45371187_45371294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000208	chr1	+	263	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	20596	16044	20596	-16044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAGACACATTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45371293	45372822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45371403_45372124_45372179_45372722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000209	chr1	+	256	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	22023	15392	22023	-15392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTATAATTACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	45372720	45373474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45372822_45373166_45373221_45373373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000210	chr1	+	209	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	22468	15055	22468	-15055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAGCTTTGGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	45373165	45373811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45373221_45373373_45373473_45373756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000211	chr1	+	226	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	22712	14517	22712	-14517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGTTTGTTCTTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	45373409	45374349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45373473_45373756_45373811_45373920_45373975_45374294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000212	chr1	+	253	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	23597	12366	23597	-12366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTAGTTGCTGATTCC	NA	NA	NA	NA	NA	NA	NA	NA	45374294	45376500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45374349_45374887_45374942_45375819_45375865_45376400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000213	chr1	+	309	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	24190	12170	24190	-12170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATAGCTGCATATGTATC	NA	NA	NA	NA	NA	NA	NA	NA	45374887	45376696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45374942_45375819_45375865_45376400_45376500_45376585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000214	chr1	+	246	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	25700	11713	25700	-11713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGGATGGGCCAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	45376397	45377153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45376500_45376585_45376694_45377117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000215	chr1	+	219	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	25886	11078	25886	-11078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAAAACTACTGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	45376583	45377788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45376694_45377117_45377172_45377733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000216	chr1	+	272	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	27035	9724	27035	-9724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTATTGTTAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	45377732	45379142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45377788_45377869_45377924_45378518_45378573_45379033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000217	chr1	+	217	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	27821	9397	27821	-9397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATGAATTCTCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	45378518	45379469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45378573_45379033_45379142_45379414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000218	chr1	+	217	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	28336	9022	28336	-9022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCTCTCCAGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	45379033	45379844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45379142_45379414_45379469_45379789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000219	chr1	+	271	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	28717	8678	28717	-8678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTATTGCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45379414	45380188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45379469_45379789_45379844_45380025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000220	chr1	+	291	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	29130	8456	29130	-8456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTCACCTTGCATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	45379827	45380410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45379844_45380025_45380188_45380297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000221	chr1	+	298	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	29409	7475	29409	-7475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTAGCAATTCAGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	45380106	45381391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45380188_45380297_45380406_45381282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000222	chr1	+	235	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	29636	6396	29636	-6396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAAATTCATGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	45380333	45382470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45380406_45381282_45381391_45382415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000223	chr1	+	273	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	30583	6204	30583	-6204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTCTAATACAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45381280	45382662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45381391_45382415_45382470_45382553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000224	chr1	+	219	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	31717	5685	31717	-5685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATTAGACATTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45382414	45383181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45382470_45382553_45382662_45383125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000225	chr1	+	289	4	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	31892	4855	31892	-4855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGTCATAAAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	45382589	45384011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45382662_45383125_45383180_45383618_45383727_45383956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000226	chr1	+	272	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	32920	4646	32920	-4646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGCATATACATACA	NA	NA	NA	NA	NA	NA	NA	NA	45383617	45384220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45383727_45383956_45384011_45384111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000227	chr1	+	362	3	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	33259	3659	33259	-3659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAGAGAGTCTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	45383956	45385207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45384011_45384111_45384220_45385007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000228	chr1	+	442	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	34351	2399	34351	-2399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAAAGATATAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	45385048	45386467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45385303_45386279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000229	chr1	+	251	2	NNC	ENSMUSG00000026043.19	novel	5564	51	NA	NA	34416	-2522	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTGGGGAAACATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	45385113	45386344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_45385300_45386279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000230	chr1	+	369	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	35581	1891	35581	-1891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGAATTCAAGGCTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45386278	45386975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45386468_45386795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000231	chr1	+	445	2	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	36122	880	36122	-880	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACCAACTAAATTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	45386819	45387986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45387039_45387760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000232	chr1	+	252	1	ISM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	37917	0	37917	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTTTTGTCGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	45388614	45388866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_45388600_45388900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000233	chr1	-	204	1	FSM	ENSMUSG00000084817.4	ENSMUST00000153604.2	423	1	397	-178	397	178	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAAATATTATGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	45896517	45896313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_45896300_45896500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000234	chr1	-	1110	1	Genic_Genomic	ENSMUSG00000025993.11	novel	NA	NA	NA	NA	16409	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGTAGTCAATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45948333	45947223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_45947200_45948300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000235	chr1	-	1164	2	ISM	ENSMUSG00000025993.11	ENSMUST00000027137.11	3370	8	14098	1081	14098	-1081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTATATTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	45950644	45948308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_45948880_45950051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000236	chr1	+	679	2	ISM	ENSMUSG00000026109.15	ENSMUST00000114565.8	2718	10	17593	49258	36	-49258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCTGATATTTGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	50966713	50969821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_50967279_50969707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000237	chr1	+	157	2	ISM	ENSMUSG00000026109.15	ENSMUST00000114565.8	2718	10	20644	41604	3087	-41604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCAGAAGGATCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	50969764	50977475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_50969818_50977371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000238	chr1	+	159	2	ISM	ENSMUSG00000026109.15	ENST00000272771.10	2811	9	144001	54481	144001	-54481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTGAAGTCATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	51110678	51171415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_51110724_51171301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000239	chr1	+	141	2	ISM	ENSMUSG00000026109.15	ENST00000272771.10	2811	9	205538	6407	205538	-6407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGTGTGAACACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	51172215	51219489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_51172278_51219410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000240	chr1	+	148	2	ISM	ENSMUSG00000026109.15	ENST00000272771.10	2811	9	252730	4980	252730	-4980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACACTGTGAAAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	51219407	51220916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_51219535_51220895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000241	chr1	+	682	2	ISM	ENSMUSG00000026109.15	ENST00000272771.10	2811	9	254211	837	254211	-837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAGATTTTGAGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	51220888	51225059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_51221055_51224543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000242	chr1	+	687	1	Genic_Genomic	ENSMUSG00000026109.15	novel	NA	NA	NA	NA	259070	5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTTGAGAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	51225747	51226434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_51225700_51226400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000243	chr1	+	731	2	FSM	ENSMUSG00000045954.8	ENSMUST00000051572.8	3055	2	392	1932	392	-1932	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCAAGGTTTCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	51328676	51340187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_51329028_51339807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000244	chr1	+	412	1	Genic_Genomic	ENSMUSG00000045954.8	novel	NA	NA	NA	NA	13425	2	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTAGCAAAACACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51341709	51342121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_51341700_51342100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000245	chr1	-	2813	1	Genic_Genomic	ENSMUSG00000026102.10	novel	NA	NA	NA	NA	29451	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATGGGTATAAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	52827396	52824583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_52824600_52827400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000246	chr1	-	3833	6	FSM	ENSMUSG00000026102.10	ENST00000322522.8	1836	6	0	-1997	0	1997	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACATGAGTCAGCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	52857034	52826596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000247	chr1	+	225	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	55	60821	55	-60816	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCAATAGTCTGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	52884259	52899324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_52884304_52892826_52892870_52899186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000248	chr1	+	303	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	14981	55359	14981	-55354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATGTGTGTGATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	52899185	52904786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_52899325_52901426_52901512_52904707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000249	chr1	+	229	4	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	17234	35862	17234	-35857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAATTCCGAGTGGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	52901438	52924283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_52901512_52904707_52904789_52908064_52908118_52924261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000250	chr1	+	210	2	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	40056	19669	40056	-19664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGATTCGGAAAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	52924260	52940476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_52924341_52940346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000251	chr1	+	294	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	56140	16286	56140	-16281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTAACAAAAGATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	52940344	52943859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_52940493_52942005_52942093_52943800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000252	chr1	+	229	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	57799	15535	57799	-15530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACGTATGGATCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	52942003	52944610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_52942093_52943800_52943860_52944529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000253	chr1	+	233	3	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	59614	7146	59614	-7141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGTATGGTAAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	52943818	52952999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_52943860_52944529_52944612_52952889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000254	chr1	+	226	2	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	71592	531	71592	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTCTCATTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52955796	52959614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_52955830_52959421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000255	chr1	+	195	1	Genic_Genomic	ENSMUSG00000041426.13	novel	NA	NA	NA	NA	75751	5	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTCCAGAATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	52959955	52960150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_52960000_52960200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000256	chr1	-	198	1	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	92572	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGTGGTTCTTAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	53228659	53228461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_53228500_53228700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000257	chr1	-	1730	5	ISM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	74658	91	74658	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTTCATGGCCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	53246573	53228552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000258	chr1	-	1494	4	ISM	ENSMUSG00000026098.14	ENST00000639501.1	1925	8	74042	-206	74042	206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTCCTTGCAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	53247189	53236030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53236462_53245720_53246572_53246734_53246879_53247121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000259	chr1	+	952	3	ISM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	1876	865	1876	-865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTGATAAATGAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	53338129	53348603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_53338312_53344613_53344766_53347985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000260	chr1	+	652	1	Genic_Genomic	ENSMUSG00000026097.10	novel	NA	NA	NA	NA	12568	5	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCTCTGTTTAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	53348821	53349473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_53348800_53349500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000261	chr1	-	540	2	ISM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	5996	0	5996	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTAATTTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	53385915	53383775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53384139_53385738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000262	chr1	-	365	1	NIC	ENSMUSG00000026095.16	novel	2442	6	NA	NA	7771	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTAATTTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	53384140	53383775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_53383800_53384100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000263	chr1	-	524	2	ISM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	5396	1963	5396	-1935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTCATTACTGAATACT	NA	NA	NA	NA	NA	NA	NA	NA	53386515	53385738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53385921_53386173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000264	chr1	-	279	2	ISM	ENSMUSG00000026095.16	ENSMUST00000123519.9	983	6	4210	1935	4210	-1935	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTCATTACTGAATACT	NA	NA	NA	NA	NA	NA	NA	NA	53387701	53385738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53385921_53387604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000265	chr1	-	690	4	FSM	ENSMUSG00000117809.2	ENSMUST00000236737.2	300	4	-133	-257	-133	257	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAGGTTGAAGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	53391911	53387380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_53387718_53389145_53389222_53390038_53390093_53391688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000266	chr1	-	371	1	ISM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	29348	0	29348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCTTAAGTTACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	53795035	53794664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53794700_53795000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000267	chr1	-	536	2	ISM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	24062	1910	24062	-1910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATATTATGTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	53800321	53796574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53796930_53800140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000268	chr1	-	1514	1	ISM	ENSMUSG00000042807.16	ENSMUST00000120904.8	11263	29	381358	4301	227840	2	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGCTTTTACTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	53851849	53850335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53850300_53851800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000269	chr1	-	1649	3	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	212558	707	212558	-707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATCAGTGAAGGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	53867131	53851044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53852493_53866034_53866148_53867043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000270	chr1	-	1572	3	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	113819	103380	113819	16254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCCACAGCTCCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	53965870	53953717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53953792_53963057_53963154_53964468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000271	chr1	-	1563	3	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	113364	112747	113364	6887	internal_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGGATGAGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	53966325	53963084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53963154_53964468_53965861_53966223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000272	chr1	-	1702	4	ISM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	107302	114172	107302	5462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAAGGGGCCACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	53972387	53964509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_53965861_53966223_53966325_53970128_53970269_53972277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000273	chr1	-	622	5	ISM	ENSMUSG00000073678.5	ENST00000409188.5	1042	10	3016	7683	3016	-7683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGTATGCACTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	54587275	54571186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000274	chr1	-	709	5	ISM	ENSMUSG00000073678.5	ENST00000409188.5	1042	10	8	9072	8	-9072	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTACATATTACACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	54590283	54572575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000275	chr1	-	788	3	ISM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	198752	0	64962	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCACACAGAGCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	54766729	54756799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_54757359_54762136_54762285_54766648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000276	chr1	-	698	6	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	28744	82284	28744	-17355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACTTCTGAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	54802947	54774154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000277	chr1	-	725	5	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	25548	100177	25548	-35248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGGCTTGCCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54806143	54792047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000278	chr1	-	171	1	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	42142	0	42142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGTATACCAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55024498	55024327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55024300_55024500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000279	chr1	-	274	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	39396	2197	39396	-2197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCGTTACGAACTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55027244	55026524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55026652_55027097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000280	chr1	-	246	2	NNC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	37049	-2875	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTTTGAGACATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	55029591	55027202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_55027315_55029457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000281	chr1	-	183	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	33070	5306	33070	-5306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCTTCACAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	55033570	55029633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55029735_55033488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000282	chr1	-	186	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	31990	9233	31990	-9233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAAAGCTCACAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	55034650	55033560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55033621_55034524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000283	chr1	-	178	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	30609	10196	30609	-10196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAGATTACATAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	55036031	55034523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55034646_55035975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000284	chr1	-	292	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	30295	11643	30295	-11643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGCTGGTCATGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	55036345	55035970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55036088_55036170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000285	chr1	-	174	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	29347	11949	29347	-11949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTACAGTTTTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	55037293	55036276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55036354_55037196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000286	chr1	-	187	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	27784	12975	27784	-12975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAGAAAATTATGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	55038856	55037302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55037419_55038785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000287	chr1	-	240	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	27329	14482	27329	-14482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGATAGAAGAAATTACCG	NA	NA	NA	NA	NA	NA	NA	NA	55039311	55038809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55038912_55039173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000288	chr1	-	201	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	27098	14934	27098	-14934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAACTACTATACTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	55039542	55039261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55039321_55039400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000289	chr1	-	200	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	26725	15132	26725	-15132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTTGATTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	55039915	55039459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55039547_55039802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000290	chr1	-	161	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	26381	15674	26381	-15674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAGCTAGAGCTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	55040259	55040001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55040074_55040170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000291	chr1	-	207	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	25980	15842	25980	-15842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCACATTAAATTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	55040660	55040169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55040258_55040541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000292	chr1	-	205	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	24275	16292	24275	-16292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGACATTTACTTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55042365	55040619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55040722_55042262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000293	chr1	-	221	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	24059	17946	24059	-17946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAGAAAGGTAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55042581	55042273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55042365_55042451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000294	chr1	-	219	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	21568	18215	21568	-18215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAGAACTATGAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	55045072	55042542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55042650_55044960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000295	chr1	-	235	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	21190	20641	21190	-20641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAAGGTACTAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	55045450	55044968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55045083_55045329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000296	chr1	-	280	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	19880	21057	19880	-21057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAAAAACACCAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	55046760	55045384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55045543_55046638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000297	chr1	-	213	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	15280	22436	15280	-22436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCTGCGGGAGCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	55051360	55046763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55046877_55051260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000298	chr1	-	190	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	12924	26989	12924	-26989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCAGACTCCTGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	55053716	55051316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55051432_55053641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000299	chr1	-	197	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	10989	29314	10989	-29314	internal_fragment	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAACTGCTTTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	55055651	55053641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55053722_55055534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000300	chr1	-	188	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	10627	31210	10627	-31210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTAATTCTTTCCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	55056013	55055537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55055650_55055937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000301	chr1	-	214	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	8139	31610	8139	-31610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGCCTCGCAGTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	55058501	55055937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55056043_55058392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000302	chr1	-	202	2	ISM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	44	34129	44	-34129	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGGAAGTGATAGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55066596	55058456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55058560_55066497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000303	chr1	+	884	3	ISM	ENSMUSG00000025981.14	ENSMUST00000087617.11	834	4	11408	-268	11408	268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCTTAGGGTATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55103336	55111380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_55103533_55106655_55106758_55110794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000304	chr1	+	583	1	ISM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	19350	0	19350	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTTATTTAAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55111278	55111861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_55111300_55111900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000305	chr1	-	1476	6	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	6197	-2	5117	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTTACCCTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	55120986	55116991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000306	chr1	-	842	3	NNC	ENSMUSG00000025980.15	novel	2388	12	NA	NA	7819	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTCTGGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	55118284	55117000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_55117600_55117687_55117861_55118214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000307	chr1	-	882	6	ISM	ENSMUSG00000025980.15	ENST00000678621.1	2268	10	4795	773	4795	-773	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCAGAAGTTGGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	55121308	55117766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000308	chr1	-	846	5	ISM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	9	5231	9	-5231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTATGGGATTTGATACG	NA	NA	NA	NA	NA	NA	NA	NA	55127174	55122224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000309	chr1	+	775	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTCTTTGGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	55127290	55130467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000310	chr1	+	246	1	Genic_Genomic	ENSMUSG00000073676.5	novel	NA	NA	NA	NA	2931	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAGTCTTTGGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	55130221	55130467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_55130200_55130500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000311	chr1	+	812	3	ISM	ENSMUSG00000025979.14	ENSMUST00000159311.8	1816	7	18913	646	18913	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGATCTGCATAACGA	NA	NA	NA	NA	NA	NA	NA	NA	55189302	55192451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_55189385_55190129_55190242_55191833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000312	chr1	+	643	1	Genic_Genomic	ENSMUSG00000025979.14	novel	NA	NA	NA	NA	23027	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTATTCTTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55193416	55194059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_55193400_55194100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000313	chr1	-	495	1	ISM	ENSMUSG00000025978.15	ENSMUST00000027121.15	3677	9	56129	0	56129	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCATGTTTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55209812	55209317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55209300_55209800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000314	chr1	-	510	2	ISM	ENSMUSG00000025978.15	ENSMUST00000027121.15	3677	9	41776	1471	41776	-1471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTAAAAGCATTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	55224165	55210788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55211242_55224108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000315	chr1	-	515	3	ISM	ENSMUSG00000025978.15	ENSMUST00000114428.3	2012	6	15530	2610	15530	-2610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTAGAACTAACGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	55250411	55243419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55243552_55245494_55245775_55250308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000316	chr1	-	1569	1	Genic_Genomic	ENSMUSG00000025977.16	novel	NA	NA	NA	NA	90136	14	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGATAATAATTAATACCT	NA	NA	NA	NA	NA	NA	NA	NA	55309775	55308206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_55308200_55309800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000317	chr1	-	1703	3	ISM	ENSMUSG00000025977.16	ENST00000282278.12	2309	8	56124	131	56124	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGTGATGTTAGAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	55343787	55308351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55309825_55339245_55339345_55343656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000318	chr1	-	229	3	ISM	ENSMUSG00000025977.16	ENSMUST00000114423.7	1106	10	57001	67	55027	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCCATTGCTATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	55344884	55339294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55339345_55343656_55343786_55344834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000319	chr1	-	249	3	ISM	ENSMUSG00000025977.16	ENSMUST00000114423.7	1106	10	39005	4429	37031	-4429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATGTTTATCTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	55362880	55343656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55343786_55344834_55344883_55362808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000320	chr1	-	248	3	ISM	ENSMUSG00000025977.16	ENSMUST00000114423.7	1106	10	22126	5607	20152	-5607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATCACCCTCCAATA	NA	NA	NA	NA	NA	NA	NA	NA	55379759	55344834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55344883_55362808_55362881_55379631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000321	chr1	+	381	1	FSM	ENSMUSG00000100215.2	ENSMUST00000162574.2	396	1	158	-143	158	143	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGCCTGATACTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	55374717	55375098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_55374700_55375100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000322	chr1	-	261	3	ISM	ENSMUSG00000025977.16	ENSMUST00000114423.7	1106	10	13789	40404	11815	5784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGATTCTCAGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	55388096	55379631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55379760_55385535_55385612_55388039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000323	chr1	-	227	3	ISM	ENSMUSG00000025977.16	ENSMUST00000159398.2	658	5	7728	118	5011	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATTGAGAACTAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	55394900	55385533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55385612_55388039_55388095_55394806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000324	chr1	-	154	2	NNC	ENSMUSG00000025977.16	novel	658	5	NA	NA	5011	-2623	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCTTTCATTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55394900	55388038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_55388095_55394802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000325	chr1	-	293	3	ISM	ENSMUSG00000025977.16	ENSMUST00000159398.2	658	5	2709	2623	-8	-2623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCTTTCATTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55399919	55388038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55388095_55394806_55394899_55399774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000326	chr1	-	469	3	ISM	ENSMUSG00000025977.16	ENSMUST00000114423.7	1106	10	14	55577	14	-9389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTATCATTGCAGATAATA	NA	NA	NA	NA	NA	NA	NA	NA	55401871	55394804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_55394899_55399774_55399919_55401640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000327	chr1	-	840	1	Genic_Genomic	ENSMUSG00000097519.3	novel	NA	NA	NA	NA	17484	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAATAGATTCTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	57399219	57398379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_57398400_57399200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000328	chr1	+	1787	4	ISM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	3618	824	3618	-824	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACCCCAGTCATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	57449104	57456288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_57449143_57450881_57451009_57452398_57452547_57454814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000329	chr1	+	1494	1	ISM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	10132	0	10132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCATGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	57455618	57457112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_57455600_57457100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000330	chr1	+	446	2	ISM	ENSMUSG00000038305.16	ENSMUST00000169772.3	2311	12	97491	629	97491	-628	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGAGGCCAGGCCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	57982220	57985495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_57982401_57985229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000331	chr1	+	2372	2	ISM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	168335	1	97625	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACGTCTGTAGAACCGT	NA	NA	NA	NA	NA	NA	NA	NA	57982354	57987552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_57982401_57985226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000332	chr1	+	2330	1	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	100494	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCTGTAGAACCGTT	NA	NA	NA	NA	NA	NA	NA	NA	57985223	57987553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_57985200_57987600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000333	chr1	+	1227	2	ISM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	17739	9347	17739	-9347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGAAACCACCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	58052868	58055711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58052902_58054517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000334	chr1	+	1236	3	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	21405	-646	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGTTGCCTTTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	58056534	58064412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_58057143_58058747_58058906_58063942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000335	chr1	+	2729	4	ISM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	9989	-1	9417	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGTGTCTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58442045	58446513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58442193_58442773_58442913_58443390_58443514_58444193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000336	chr1	+	2325	1	Genic_Genomic	ENSMUSG00000051223.15	novel	NA	NA	NA	NA	11560	1	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGTGTCTGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58444188	58446513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_58444200_58446500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000337	chr1	-	338	1	Genic_Genomic	ENSMUSG00000026035.16	novel	NA	NA	NA	NA	14039	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	58470489	58470151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_58470200_58470500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000338	chr1	-	376	2	ISM	ENSMUSG00000026035.16	ENSMUST00000117069.8	1363	7	10987	73	10927	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTCTGCCACTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	58473601	58470225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_58470490_58473489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000339	chr1	-	150	2	ISM	ENSMUSG00000026035.16	ENSMUST00000114345.9	1175	6	6954	585	6954	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCCACACTTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	58477574	58473530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_58473609_58477502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000340	chr1	-	164	2	ISM	ENSMUSG00000026035.16	ENSMUST00000114345.9	1175	6	4431	4557	4431	-4557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCCCTGTGATTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	58480097	58477502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_58477571_58480001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000341	chr1	-	173	2	ISM	ENSMUSG00000026035.16	ENSMUST00000114345.9	1175	6	2769	7053	2769	-7053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGTCCACTAACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	58481759	58479998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_58480096_58481683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000342	chr1	-	175	2	ISM	ENSMUSG00000026035.16	ENSMUST00000114345.9	1175	6	100	10802	100	-10802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATGTATCATAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	58484428	58483747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_58483799_58484304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000343	chr1	+	2609	4	ISM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	4522	-1197	4522	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAATGTACAAGAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	58491311	58502622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58491375_58494755_58494895_58496938_58497023_58500299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000344	chr1	+	2331	1	Genic_Genomic	ENSMUSG00000026036.18	novel	NA	NA	NA	NA	13503	8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAATGTACAAGAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	58500292	58502623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_58500300_58502600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000345	chr1	-	1522	1	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	37124	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTAGTTTTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	58503451	58501929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_58501900_58503500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000346	chr1	-	1664	3	ISM	ENSMUSG00000026037.15	ENSMUST00000114325.8	1587	15	33725	-1417	33725	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTTGCAGAGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58506850	58501945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_58503450_58505153_58505273_58506809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000347	chr1	+	763	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	58625542	58635123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_58625830_58630248_58630409_58634807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000348	chr1	+	372	3	FSM	ENSMUSG00000026032.9	ENST00000454214.1	419	3	-4	51	-4	-51	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAATATTTCCTGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	58625795	58634916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_58625899_58630248_58630409_58634807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000349	chr1	+	402	2	ISM	ENSMUSG00000026032.9	ENST00000454214.1	419	3	4437	-70	4437	70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTGAAAGAATATTATATG	NA	NA	NA	NA	NA	NA	NA	NA	58630236	58635037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58630409_58634807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000350	chr1	+	322	1	NIC	ENSMUSG00000026032.9	novel	763	3	NA	NA	9002	0	mono-exon	FALSE	NA	NA	NA	NA	NA	588	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	58634801	58635123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_58634800_58635100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000351	chr1	+	918	4	FSM	ENSMUSG00000026031.16	ENST00000341582.10	929	4	12	-1	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAACCCCAGACCGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	58770320	58793078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_58770451_58780061_58780206_58791497_58792006_58792942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000352	chr1	+	939	2	ISM	ENSMUSG00000026031.16	ENSMUST00000114309.8	2010	5	17892	138	36	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCAGCCTCCTCGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	58770344	58772248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58770447_58771411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000353	chr1	+	705	4	ISM	ENSMUSG00000026031.16	ENST00000340870.6	842	5	1103	-1	1103	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCAGGTGAGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	58771411	58791996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58771486_58779421_58779472_58780123_58780206_58791497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000354	chr1	+	784	3	NNC	ENSMUSG00000026031.16	novel	929	4	NA	NA	9753	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAACCCCAGACCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	58780061	58793077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_58780206_58791497_58792006_58792945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000355	chr1	+	211	1	ISM	ENSMUSG00000026031.16	ENSMUST00000114313.8	6572	10	43405	3709	23815	10	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGCCTAGTGAGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	58794123	58794334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58794100_58794300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000356	chr1	+	894	4	FSM	ENSMUSG00000026029.15	ENST00000264275.9	940	4	51	-5	51	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCTGGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	58866415	58884008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_58866472_58868031_58868171_58872740_58872934_58883502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000357	chr1	+	502	2	ISM	ENSMUSG00000026029.15	ENST00000264274.13	783	3	12	2045	12	-124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGATGAGGCAGACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58868045	58883879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58868171_58883502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000358	chr1	+	671	3	NNC	ENSMUSG00000026029.15	novel	940	4	NA	NA	58	-98	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTACGGTGAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	58868091	58883905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_58868171_58872744_58872934_58883502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000359	chr1	+	1488	3	ISM	ENSMUSG00000026029.15	ENST00000323492.11	976	4	4698	-640	4698	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAAGGTGAGTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	58872731	58886564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_58872934_58883502_58884005_58885780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000360	chr1	+	506	1	NIC	ENSMUSG00000026029.15	novel	2585	9	NA	NA	15465	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTGGCCTCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	58883498	58884004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_58883500_58884000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000361	chr1	+	820	1	Genic_Genomic	ENSMUSG00000026029.15	novel	NA	NA	NA	NA	17815	6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCAGGTTAGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	58885848	58886668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_58885800_58886700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000362	chr1	-	1843	2	ISM	ENSMUSG00000026028.13	ENST00000332624.8	3982	15	39718	0	39522	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGATTTTATTGTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	58945974	58941608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_58943342_58945864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000363	chr1	+	1401	2	ISM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	20050	54	20050	-54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTCTTAAAAGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	59032730	59034820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59032763_59033451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000364	chr1	+	1375	1	Genic_Genomic	ENSMUSG00000026027.14	novel	NA	NA	NA	NA	20820	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTTCTTCATCTATA	NA	NA	NA	NA	NA	NA	NA	NA	59033500	59034875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_59033500_59034900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000365	chr1	-	810	3	ISM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	13184	-7	13184	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTAACTGAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	59145781	59139748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59140358_59144704_59144827_59145702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000366	chr1	-	611	1	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	18606	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTAACTGAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	59140359	59139748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_59139700_59140400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000367	chr1	-	588	5	ISM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	20666	0	20666	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGTCCTGCTTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	59168147	59160410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59160604_59162601_59162737_59163789_59163899_59164681_59164776_59168090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000368	chr1	-	531	5	ISM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	19609	2200	19609	-2200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTCAAGGTAAATCATGC	NA	NA	NA	NA	NA	NA	NA	NA	59169204	59162610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59162737_59163789_59163899_59164681_59164776_59168090_59168172_59169083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000369	chr1	-	1246	1	ISM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	73041	19	29958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTCATCTCTACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	59203349	59202103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59202100_59203300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000370	chr1	-	1469	3	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	26533	52	26533	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACTGTTTTGGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	59206774	59202155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59203375_59206341_59206439_59206621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000371	chr1	-	574	4	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	19109	6892	19109	-5779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTACTGTGGTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	59214198	59208995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59209173_59209595_59209719_59212314_59212473_59214082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000372	chr1	-	353	3	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	10816	17167	10816	-25	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGTTGGAAACAACTT	NA	NA	NA	NA	NA	NA	NA	NA	59222491	59219270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59219343_59219707_59219820_59222322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000373	chr1	-	316	3	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	10268	17665	10268	-523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTCACCCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	59223039	59219768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59219820_59222322_59222488_59222939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000374	chr1	-	536	4	ISM	ENSMUSG00000026024.15	ENST00000681495.1	3764	21	8547	20218	8547	-3076	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGTCTGAAATGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	59224760	59222321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59222488_59222939_59223039_59224371_59224438_59224555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000375	chr1	-	390	3	NNC	ENSMUSG00000026024.15	novel	4385	23	NA	NA	-5011	-13947	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTACTCTACTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59238318	59233192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_59233258_59235345_59235531_59238178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000376	chr1	-	539	3	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	33897	16103	-8951	-16103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATCTGTCCCATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	59242258	59235348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59235531_59238178_59238351_59242073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000377	chr1	-	334	3	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	29164	22828	12841	-22828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACTGCAGTAGAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	59246991	59242073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59242257_59245677_59245756_59246918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000378	chr1	-	342	3	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	27862	26451	11539	-26451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCCTCGACTCTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	59248293	59245696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59245756_59246918_59247016_59248107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000379	chr1	-	1463	4	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	20978	27751	4655	-27751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTCTGGATGGTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	59255177	59246996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59247016_59248107_59248277_59250289_59250648_59254260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000380	chr1	-	474	2	ISM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	9314	46003	9314	-28861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCCACCAGCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	59250518	59248106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59248294_59250231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000381	chr1	-	966	3	ISM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	16380	35366	57	-35366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAATATCGGACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	59259775	59254611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59255181_59257085_59257241_59259533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000382	chr1	+	474	5	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	909	70898	909	-70898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACTTTAAGAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	59296974	59320630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59297116_59297861_59297957_59304762_59304843_59319727_59319823_59320567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000383	chr1	+	450	5	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	1805	64482	1805	-64482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCGCCCCTCAGGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59297870	59327046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59297957_59304762_59304843_59319727_59319823_59320567_59320631_59326920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000384	chr1	+	446	5	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	8735	62589	8735	-62589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATCTAGTGCCCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	59304800	59328939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59304843_59319727_59319823_59320567_59320631_59326920_59327045_59328817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000385	chr1	+	405	4	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	24501	51079	24501	-51079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAAAAGTTTCTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	59320566	59340449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59320631_59326920_59327045_59328817_59328939_59340353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000386	chr1	+	404	4	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	30854	41510	30854	-41510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGTTCTACATATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	59326919	59350018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59327045_59328817_59328939_59340353_59340448_59349954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000387	chr1	+	428	5	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	32792	21371	32792	-21371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGTGTGCGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	59328857	59370157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59328939_59340353_59340448_59349954_59350019_59365829_59365879_59370017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000388	chr1	+	427	5	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	44327	8003	44327	-8003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTTACCTACATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	59340392	59383525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59340448_59349954_59350019_59365829_59365879_59370017_59370158_59383406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000389	chr1	+	303	4	ISM	ENSMUSG00000026023.17	ENST00000260967.6	1233	14	69863	0	69759	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACACAGAGGAAGGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59365824	59449690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59365879_59370017_59370158_59383406_59383493_59449667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000390	chr1	+	2172	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	2364	-4	2364	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGTTTATTTACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	59523946	59526118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_59523900_59526100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000391	chr1	-	1201	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	19	-5	19	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTTTTATTTTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	59709974	59678587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000392	chr1	-	835	1	ISM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	30566	0	15267	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59679427	59678592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_59678600_59679400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000393	chr1	-	1193	5	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59709967	59678592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_59679428_59681576_59681649_59683671_59683754_59694616_59694692_59709838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000394	chr1	-	880	2	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	13077	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59681617	59678592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_59679428_59681572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000395	chr1	-	961	4	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	39	-58	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGGACATCGTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	59694655	59678650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_59679428_59681576_59681649_59683675_59683749_59694616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000396	chr1	-	266	4	FSM	ENSMUSG00000026021.16	ENST00000513479.1	275	4	10	-1	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTCGACGGTTTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	59694684	59679375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_59679428_59681576_59681645_59683675_59683754_59694616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000397	chr1	+	3098	4	FSM	ENSMUSG00000026020.10	ENST00000564443.1	371	4	2	-2729	2	2528	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGTCGTACGCATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	59746162	59753197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_59746224_59748161_59748296_59749676_59749812_59750429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000398	chr1	+	359	4	NNC	ENSMUSG00000026020.10	novel	371	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAAGACTAATGTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	59746169	59750468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_59746224_59748161_59748296_59749679_59749812_59750429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000399	chr1	+	2794	1	Genic_Genomic	ENSMUSG00000026020.10	novel	NA	NA	NA	NA	9251	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCAGCGGGTGCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	59755411	59758205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_59755400_59758200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000400	chr1	+	1644	5	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	37689	2413	37689	-2413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACAACAGCAATCCATG	NA	NA	NA	NA	NA	NA	NA	NA	59890434	59907617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000401	chr1	+	1737	2	ISM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	53931	-2	53931	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTGGTATCCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	59906676	59910032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_59907775_59909393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000402	chr1	-	359	1	Genic_Genomic	ENSMUSG00000026019.16	novel	NA	NA	NA	NA	27766	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGATGTTTGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	60109301	60108942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_60108900_60109300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000403	chr1	-	1145	1	ISM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	19896	7083	19896	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTGTCTAGGCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	60117171	60116026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60116000_60117200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000404	chr1	-	260	1	Genic_Genomic	ENSMUSG00000026014.16	novel	NA	NA	NA	NA	86231	2	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTGGATGAATGCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	60486334	60486074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_60486100_60486300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000405	chr1	-	500	3	ISM	ENSMUSG00000026014.16	ENST00000457812.5	2500	13	37863	493	37862	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTAAGTTCGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	60534703	60486569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60486797_60532696_60532840_60534573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000406	chr1	-	476	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	34870	0	34870	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACACACAAACATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	60537695	60532696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60532840_60534573_60534695_60535383_60535483_60537582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000407	chr1	-	356	3	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	33781	2687	33781	-2687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATTGCCTTTCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	60538784	60535383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60535483_60537582_60537694_60538638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000408	chr1	-	444	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	31528	4886	31528	-4886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTCTAATTGATATTA	NA	NA	NA	NA	NA	NA	NA	NA	60541037	60537582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60537694_60538638_60538783_60539713_60539780_60540914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000409	chr1	-	388	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	30420	6048	30420	-6048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGAGTCCTTTGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	60542145	60538744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60538783_60539713_60539780_60540914_60541037_60541983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000410	chr1	-	428	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	14359	8218	14359	-8218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATTGCGTAACTTATG	NA	NA	NA	NA	NA	NA	NA	NA	60558206	60540914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60541037_60541983_60542144_60542676_60542755_60558138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000411	chr1	-	677	4	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	7457	9287	7457	-9287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTAATGCCACTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	60565108	60541983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60542144_60542676_60542755_60558138_60558220_60564750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000412	chr1	-	499	3	ISM	ENSMUSG00000026014.16	ENSMUST00000140485.8	10024	14	40917	20543	7544	-9297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAATGGGTTAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	60565021	60541993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60542144_60542676_60542755_60564750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000413	chr1	-	559	3	ISM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	-1	32231	0	-32231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAAGGACTGCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	60572566	60564927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_60565260_60566542_60566649_60572445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000414	chr1	+	691	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	1102	-575	1102	575	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGCTTAGATGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	60744192	60744883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_60744200_60744900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000415	chr1	+	170	1	FSM	ENSMUSG00000081382.2	ENSMUST00000121555.2	525	1	427	-72	427	72	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAGCATGGCAGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	60940483	60940653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_60940500_60940700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000416	chr1	-	269	1	Genic_Genomic	ENSMUSG00000100811.2	novel	NA	NA	NA	NA	3084	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGGAACCAGAAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	62754148	62753879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_62753900_62754100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000417	chr1	+	790	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	34587	47798	19363	-47798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCAGGGAAACCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	62777447	62788342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000418	chr1	+	641	3	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	45427	33955	30203	-33955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCAGACAAAGGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	62788287	62802185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_62788448_62799933_62800079_62801849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000419	chr1	+	634	5	ISM	ENSMUSG00000025969.16	ENSMUST00000027112.13	4216	16	59190	13606	43966	-13606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGAAGCCCTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	62802050	62822534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000420	chr1	-	277	1	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	26984	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCATTAACTAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	63183084	63182807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_63182800_63183100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000421	chr1	-	768	5	ISM	ENSMUSG00000025968.17	ENST00000423725.5	2274	17	20796	47	20796	39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACTTATCAAAAATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	63189272	63182854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000422	chr1	-	720	5	ISM	ENSMUSG00000025968.17	ENST00000432169.5	1951	15	14608	4609	14608	-4609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTTTTGAGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	63195460	63187554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000423	chr1	-	276	2	ISM	ENSMUSG00000025968.17	ENST00000432169.5	1951	15	13631	12417	13631	-12417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTAATCCTTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	63196437	63195362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_63195492_63196290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000424	chr1	-	643	5	ISM	ENSMUSG00000025968.17	ENST00000432169.5	1951	15	6075	13389	6075	-13389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACTTATGCACTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	63203993	63196334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000425	chr1	+	1924	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	22	-7	22	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTCAGCTTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	63216005	63219652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000426	chr1	+	1341	4	NNC	ENSMUSG00000025967.17	novel	1939	6	NA	NA	1312	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGCAGTTTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	63217600	63219645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_63217725_63217995_63218058_63218406_63218533_63218616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000427	chr1	+	571	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	14210	1879	4240	-1879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCCAAAACTAAAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	63334136	63342334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_63334219_63341845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000428	chr1	+	1004	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	22308	896	12338	-896	internal_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGATGAGAACTACGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	63342234	63343317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_63342763_63342841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000429	chr1	+	619	2	ISM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	23501	-4	13531	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTCTTCATTCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	63343427	63344217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_63343931_63344101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000430	chr1	-	1151	1	Genic_Genomic	ENSMUSG00000025956.11	novel	NA	NA	NA	NA	9546	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCAGTGTTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	64646781	64645630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_64645600_64646800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000431	chr1	-	1348	3	FSM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	189	1129	189	-1129	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTAGTCGGTGCCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	64656138	64646767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_64647297_64654256_64654369_64655431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000432	chr1	-	719	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	-1	-7	-1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTACCTATGTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	64729819	64719022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_64719545_64729622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000433	chr1	-	519	1	NIC	ENSMUSG00000087213.3	novel	711	2	NA	NA	10219	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAGTGCTACCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	64719548	64719029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_64719000_64719500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000434	chr1	+	699	2	FSM	ENSMUSG00000070871.11	ENST00000420822.1	693	2	-4	-2	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGCATAAAGTTATAGG	NA	NA	NA	NA	NA	NA	NA	NA	64730093	64732460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_64730640_64732307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000435	chr1	+	698	2	NNC	ENSMUSG00000070871.11	novel	693	2	NA	NA	0	2	intron_retention	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGCATAAAGTTATAGG	NA	NA	NA	NA	NA	NA	NA	NA	64730097	64732460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_64730643_64732307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000436	chr1	-	2038	5	ISM	ENSMUSG00000051344.14	ENST00000457206.1	2127	6	12	21199	12	-21199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCTGGAAGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	64977589	64921544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_64921576_64922287_64922482_64931910_64932057_64960708_64961642_64976855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000437	chr1	-	767	1	FSM	ENSMUSG00000084416.4	ENSMUST00000120360.2	654	1	-30	-83	-30	83	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTACAATAAAAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	65033793	65033026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_65033000_65033800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000438	chr1	-	646	1	Genic_Genomic	ENSMUSG00000025950.17	novel	NA	NA	NA	NA	19921	1	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTATGTGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	65198419	65197773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_65197800_65198400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000439	chr1	-	1276	5	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	12895	300	12895	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATATTTTAAGACCACT	NA	NA	NA	NA	NA	NA	NA	NA	65205445	65198074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000440	chr1	-	648	4	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	7929	6566	7929	-6564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTATGAAGTCCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	65210411	65204340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_65204411_65205265_65205444_65207657_65207764_65210117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000441	chr1	-	716	4	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	3812	7490	3812	-7488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTATGGCCCTTACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	65214528	65205264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_65205444_65207657_65207764_65210117_65210410_65214389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000442	chr1	-	713	4	ISM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	15	9883	15	-9881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCAGTCTGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	65218325	65207657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_65207764_65210117_65210410_65214389_65214528_65218148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000443	chr1	+	759	5	ISM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	13	8627	13	-8365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTCCAGCATCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	65229487	65255232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_65229659_65231303_65231454_65241874_65242083_65244747_65244838_65255092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000444	chr1	+	541	4	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	13	21536	13	-21536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGATTTAGCCTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	65229487	65242061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_65229659_65231303_65231454_65231692_65231726_65241874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000445	chr1	+	628	5	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	2219	4526	2219	-4526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAATTTCAAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	65231693	65259071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_65231726_65241874_65242083_65244747_65244838_65255092_65255232_65258912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000446	chr1	+	536	5	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	12554	2074	12554	-2074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGACCACTTCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	65242028	65261523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000447	chr1	+	548	4	ISM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	25627	786	25627	-786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGGTTTTCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	65255101	65262811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_65255232_65258912_65259071_65261428_65261541_65262663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000448	chr1	+	958	4	ISM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	29437	0	29437	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGTAACAACAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	65258911	65263859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_65259071_65261428_65261541_65262663_65262812_65263320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000449	chr1	-	696	2	Antisense	novelGene_ENSMUSG00000025949.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCAAAGCACAGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	65263859	65262657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_-_65262809_65263314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000450	chr1	+	1606	4	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	116	25321	116	-25321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGACGAGAAGCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	66419786	66452845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66419933_66438547_66438662_66440602_66440681_66451577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000451	chr1	+	1573	3	ISM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	34405	22141	34405	-22141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGTTTAATTCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	66454075	66456025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66455307_66455502_66455710_66455890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000452	chr1	+	2473	2	ISM	ENSMUSG00000055567.19	ENST00000272845.10	13297	63	225951	1544	225917	-1544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAGTCTATTATTAACT	NA	NA	NA	NA	NA	NA	NA	NA	66733522	66736760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66733724_66734488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000453	chr1	+	2428	1	ISM	ENSMUSG00000055567.19	ENST00000673951.1	13573	64	228515	0	228271	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGCTCTAATTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	66735876	66738304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66735900_66738300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000454	chr1	+	347	3	ISM	ENSMUSG00000026005.16	ENST00000429907.5	868	6	-3	3281	-3	-3281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGATAATAGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66740062	66753877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66740188_66745604_66745685_66753735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000455	chr1	+	323	3	ISM	ENSMUSG00000026005.16	ENST00000429907.5	868	6	5573	2750	5573	-2750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAAGACTCTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66745638	66754408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66745685_66753735_66753876_66754271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000456	chr1	+	269	3	ISM	ENSMUSG00000026005.16	ENST00000429907.5	868	6	13764	1953	13764	-1953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACGACTCCTCAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	66753829	66755205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66753876_66754271_66754407_66755117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000457	chr1	+	387	3	ISM	ENSMUSG00000026005.16	ENST00000435437.2	827	6	14230	74	14230	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATTGCAATCGAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66754295	66757105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66754407_66755117_66755205_66756916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000458	chr1	+	2246	3	ISM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	14310	0	14234	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	66754299	66758964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66754407_66755117_66755205_66756912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000459	chr1	+	241	1	ISM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	16952	1782	16876	3	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTTATAGAGATGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	66756941	66757182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66756900_66757200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000460	chr1	+	586	1	ISM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	18389	0	18313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	66758378	66758964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_66758400_66759000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000461	chr1	-	677	5	ISM	ENSMUSG00000061816.16	ENSMUST00000119429.8	803	7	5050	-3	5029	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCGTGTCTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66969463	66963453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692_66965867_66969344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000462	chr1	-	602	4	NNC	ENSMUSG00000061816.16	novel	621	5	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAAATCCCATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66974471	66965224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_66965445_66965692_66965867_66969344_66969516_66974434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000463	chr1	-	422	4	ISM	ENSMUSG00000061816.16	ENSMUST00000120415.8	621	5	790	142	790	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGCCAGCCTCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	66973702	66965366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_66965445_66965692_66965867_66969344_66969489_66973676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000464	chr1	-	312	1	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	38037	0	38006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCGGGTACTGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	67039987	67039675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_67039700_67040000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000465	chr1	-	3476	4	ISM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	31813	0	31782	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCGGGTACTGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	67046211	67039675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000466	chr1	-	182	2	ISM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	29471	3630	29471	-3630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTAGACTTTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	67048522	67046163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_67046210_67048386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000467	chr1	-	278	2	ISM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	28786	5860	28786	-5860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGGTAAGGGATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	67049207	67048393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_67048534_67049069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000468	chr1	+	705	5	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	13404	35109	13404	-35109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCCCAGACAAGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	67211900	67234386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_67212026_67213461_67213661_67216067_67216245_67219229_67219349_67234301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000469	chr1	+	573	5	ISM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	7655	8702	7655	-8702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGTGCAGTTCCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	71603963	71610088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000470	chr1	+	672	2	ISM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	20650	550	20650	-550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGCTGGGACTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	71616958	71618240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_71617101_71617710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000471	chr1	+	655	1	Genic_Genomic	ENSMUSG00000026192.14	novel	NA	NA	NA	NA	21828	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTGTGCTGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	71618136	71618791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_71618100_71618800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000472	chr1	-	196	1	ISM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	67453	4	67442	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	71624878	71624682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_71624700_71624900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000473	chr1	-	318	2	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	42154	23931	42143	-23931	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGAGGAGAGCCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	71650177	71648613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_71648842_71650087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000474	chr1	-	350	2	ISM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	26925	38745	26914	18556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCGTATAGCAGGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	71665406	71663427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_71663504_71665132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000475	chr1	-	1075	1	ISM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	51791	0	51791	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTACTGTTTTAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	72199675	72198600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72198600_72199700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000476	chr1	-	1079	3	ISM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	48186	713	48186	-713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGAATAGCATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	72203280	72199313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72200179_72201480_72201645_72203230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000477	chr1	-	238	1	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	24905	0	24850	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	72298568	72298330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72298300_72298600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000478	chr1	-	263	2	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	22249	113	22194	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTCACAAGAGCTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	72301224	72298443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72298593_72301110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000479	chr1	-	320	3	ISM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	13941	2780	13886	-2780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAGCCAGGAAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	72309532	72301110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72301223_72306565_72306677_72309435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000480	chr1	-	234	2	NNC	ENSMUSG00000026189.14	novel	932	7	NA	NA	7947	-7889	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATATTTTTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	72315471	72314043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_72314127_72315320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000481	chr1	-	462	3	ISM	ENSMUSG00000026189.14	ENSMUST00000097698.5	932	7	5	9170	5	-9170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGTCGACAGCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	72323413	72315324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72315491_72316445_72316580_72323251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000482	chr1	+	604	2	ISM	ENSMUSG00000026188.12	ENST00000406027.2	1853	3	5	3749	5	-3749	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGGAGCCTGAAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	72323617	72337252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72323851_72336881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000483	chr1	+	726	2	ISM	ENSMUSG00000026188.12	ENST00000406027.2	1853	3	13358	800	13358	-800	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCTTCTACCCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	72336970	72340201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72337338_72339842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000484	chr1	+	424	1	ISM	ENSMUSG00000026188.12	ENSMUST00000027380.12	2928	3	17055	1257	16970	5	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAAGTTTTCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	72340582	72341006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72340600_72341000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000485	chr1	+	491	4	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	5038	75762	5038	-75762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAATGGGGACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	72351623	72358349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72351751_72353312_72353362_72354617_72354741_72358157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000486	chr1	+	511	4	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	8093	68595	8093	-68595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAAGTGTCTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	72354678	72365516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72354741_72358157_72358350_72364232_72364348_72365374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000487	chr1	+	494	4	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	35583	38066	35583	-38066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGCATGCCACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	72382168	72396045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72382302_72385386_72385584_72393401_72393496_72395975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000488	chr1	+	486	4	ISM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	75928	-1	75928	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGAAGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	72422513	72434112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72422614_72422860_72422929_72433054_72433127_72433866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000489	chr1	-	789	4	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	32462	15599	32462	-15599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTAAGATGCAGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	72705748	72697829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72697963_72698136_72698379_72704246_72704416_72705503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000490	chr1	-	760	4	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	28854	15905	28854	-15905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATTTTATCATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	72709356	72698135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72698379_72704246_72704416_72705503_72705746_72709250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000491	chr1	-	815	4	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	17058	30899	17058	-30899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAGAACATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	72721152	72713129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72713339_72714827_72715030_72719139_72719360_72720968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000492	chr1	-	837	4	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	8695	38761	8695	-38761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGCTATGAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	72729515	72720991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72721150_72726883_72726988_72727708_72727873_72729104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000493	chr1	-	1233	3	ISM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	0	45478	0	-45478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGAATTATTAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	72738210	72727708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72727873_72729104_72729543_72737579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000494	chr1	+	561	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACATAGCTTGGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	72750448	72752975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000495	chr1	+	537	4	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	2	-11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTAAGACAATTATGTACA	NA	NA	NA	NA	NA	NA	NA	NA	72750450	72752961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72750483_72750830_72750952_72751300_72751384_72752660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000496	chr1	+	416	3	ISM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	373	117	-48	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAGACATACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	72750821	72752855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72750960_72751300_72751384_72752660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000497	chr1	+	528	3	FSM	ENSMUSG00000046330.11	ENST00000473096.1	238	3	-43	-247	-43	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTATGTACATAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72750826	72752968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_72750964_72751300_72751384_72752660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000498	chr1	+	475	3	NNC	ENSMUSG00000046330.11	novel	238	3	NA	NA	-39	-47	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTAAGATTTTAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72750830	72752925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72750964_72751306_72751384_72752660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000499	chr1	-	490	3	Antisense	novelGene_ENSMUSG00000046330.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGACCTTCTTGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	72752972	72750856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_-_72750950_72751294_72751378_72752658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000500	chr1	-	388	2	Antisense	novelGene_ENSMUSG00000046330.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGTTAAGATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72752972	72751298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_-_72751378_72752663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000501	chr1	+	400	2	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	430	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACATAGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72751299	72752972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72751388_72752660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000502	chr1	+	367	2	NNC	ENSMUSG00000046330.11	novel	558	4	NA	NA	445	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACATAGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72751314	72752972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72751384_72752674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000503	chr1	+	327	1	Genic_Genomic	ENSMUSG00000046330.11	novel	NA	NA	NA	NA	1780	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATAGCTTGGTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	72752649	72752976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_72752600_72753000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000504	chr1	+	1309	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTACTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72863660	72891634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000505	chr1	+	787	3	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	39	-2763	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGGCCAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72863700	72888863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72864124_72888248_72888472_72888722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000506	chr1	+	667	3	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	164	-2766	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGAGTGTGGGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	72863825	72888860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72864124_72888244_72888476_72888722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000507	chr1	+	763	3	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	23759	-84	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTACAGGCCTGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	72888239	72891542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72888476_72888722_72888864_72891156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000508	chr1	+	564	2	ISM	ENSMUSG00000039323.19	ENSMUST00000120564.2	991	4	24231	58	24231	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTTTTATTTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	72888711	72891568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_72888864_72891156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000509	chr1	+	561	2	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	24241	-45	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATCCCTGTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72888721	72891581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72888864_72891162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000510	chr1	+	544	2	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	24290	-23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAAGATTAAAGGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	72888770	72891603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_72888868_72891156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000511	chr1	+	489	1	Genic_Genomic	ENSMUSG00000039323.19	novel	NA	NA	NA	NA	26666	2	mono-exon	FALSE	NA	NA	NA	NA	NA	774	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCTTACTTGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72891146	72891635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_72891100_72891600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000512	chr1	-	161	1	ISM	ENSMUSG00000026185.9	ENSMUST00000027377.9	6006	4	16792	0	16792	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCATCGCCTTCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	72897251	72897090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72897100_72897300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000513	chr1	-	233	2	ISM	ENSMUSG00000026185.9	ENSMUST00000027377.9	6006	4	11623	4463	11623	-4463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAACGTTGAGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	72902420	72901553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72901668_72902301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000514	chr1	-	257	2	ISM	ENSMUSG00000026185.9	ENSMUST00000027377.9	6006	4	10897	5211	10897	-5211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATGCCCCTGTGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	72903146	72902301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72902422_72903009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000515	chr1	-	179	2	ISM	ENSMUSG00000026185.9	ENSMUST00000027377.9	6006	4	1021	6028	1021	-6028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGACCGCAGAAAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	72913022	72903118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_72903240_72912964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000516	chr1	-	1170	1	ISM	ENSMUSG00000055322.17	ENSMUST00000169786.8	9966	35	213046	1	17112	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGCCTGGCTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	73950560	73949390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_73949400_73950600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000517	chr1	+	831	3	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	1843	14424	1843	-14424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTCTATTGTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	74168848	74172506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74169001_74170336_74170393_74171883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000518	chr1	+	788	3	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	3327	13562	3327	-13562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGGCAACACCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	74170332	74173368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74170393_74171883_74172506_74173262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000519	chr1	+	1114	5	ISM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	4876	0	4876	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACCAGTTCACTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	74171881	74186930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74172506_74173262_74173367_74180077_74180225_74185812_74185924_74186802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000520	chr1	-	1754	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	62	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	74323835	74318999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000521	chr1	-	464	1	ISM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	4429	6	4371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	74319468	74319004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74319000_74319500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000522	chr1	+	367	2	ISM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	13	1441	13	-1441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAACTGCTCCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	74324101	74325172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74324297_74325000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000523	chr1	+	391	2	ISM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	911	142	786	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGACTGCCGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74324999	74326471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74325170_74326250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000524	chr1	+	229	1	Genic_Genomic	ENSMUSG00000026179.15	novel	NA	NA	NA	NA	2172	1	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAGGTTGAATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	74326385	74326614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_74326400_74326600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000525	chr1	-	715	1	Genic_Genomic	ENSMUSG00000006301.18	novel	NA	NA	NA	NA	15403	3	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTTGCTGTGGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74328117	74327402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_74327400_74328100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000526	chr1	-	953	4	ISM	ENSMUSG00000006301.18	ENSMUST00000113796.8	11011	11	13070	555	13070	-555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGGCTAGGGGAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74330450	74327966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000527	chr1	+	782	1	ISM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	4995	0	4995	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCCCCCACCTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	74435662	74436444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74435700_74436400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000528	chr1	+	1849	3	ISM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	20947	486	20947	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCCCCTGCCTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	74566163	74569515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74566250_74566750_74566843_74567844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000529	chr1	+	1705	1	Genic_Genomic	ENSMUSG00000026174.10	novel	NA	NA	NA	NA	23081	1	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGTTTTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	74568297	74570002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_74568300_74570000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000530	chr1	+	668	3	ISM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	10	2387	10	-2068	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCACTGACCGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	74627468	74629215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74627647_74628644_74629038_74629118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000531	chr1	+	791	4	ISM	ENSMUSG00000026172.13	ENSMUST00000113732.2	1679	8	1112	1456	1112	-1391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTAGTCAAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74628644	74629892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74629038_74629118_74629259_74629423_74629619_74629829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000532	chr1	+	657	2	ISM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	3287	85	3213	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTATTTGTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74630745	74631517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74630866_74630980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000533	chr1	+	614	1	ISM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	3530	0	3456	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCTGCCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	74630988	74631602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74631000_74631600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000534	chr1	+	547	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	474	10564	474	-10564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCGAGGTAGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	74831148	74832774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74831443_74832521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000535	chr1	+	569	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	1836	3352	1836	-3352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAAGGACTTTCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	74832510	74839986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74832785_74839691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000536	chr1	+	610	2	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	9071	773	9071	-773	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGAGCCGCGCCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	74839745	74842565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74840072_74842281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000537	chr1	+	321	1	ISM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	12343	0	12343	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTCCAGGCAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	74843017	74843338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_74843000_74843300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000538	chr1	-	314	1	NIC	ENSMUSG00000047021.15	novel	5727	33	NA	NA	8021	4	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAAACAACTGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	74964252	74963938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_74963900_74964300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000539	chr1	-	729	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	6416	109	6416	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCCCCCACTCAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	74965857	74964051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74964312_74964531_74964733_74965589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000540	chr1	-	271	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	6633	570	6633	-570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCCCCACACAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	74965640	74964512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74964733_74965589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000541	chr1	-	480	2	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	5876	1658	5876	-1658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCACCAGGTGAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	74966397	74965600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74965856_74966172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000542	chr1	-	572	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	4909	2228	4909	-2228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCGTCCCAGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	74967364	74966170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74966396_74966755_74966902_74967163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000543	chr1	-	430	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	4613	2897	4613	-2897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCCAGAAGGTGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	74967660	74966839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74966902_74967163_74967364_74967492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000544	chr1	-	362	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	3754	3332	3754	-3332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAAGTGACCTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	74968519	74967274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74967364_74967492_74967660_74968413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000545	chr1	-	456	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	1084	3551	1084	3430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGAAGGTCCTGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	74971189	74967493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74967660_74968413_74968517_74971002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000546	chr1	-	339	3	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	2	4469	2	2512	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTCAGCCCAACAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	74972271	74968411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_74968517_74971002_74971188_74972222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000547	chr1	-	325	2	FSM	ENSMUSG00000047021.15	ENST00000295729.6	315	2	-1	-9	-1	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCACCAAGTCAGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	74972274	74970914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_74971188_74972222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000548	chr1	-	304	2	NNC	ENSMUSG00000047021.15	novel	315	2	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAAGGTCACCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	74972269	74970923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_74971181_74972222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000549	chr1	-	652	2	ISM	ENSMUSG00000026162.9	ENSMUST00000152855.3	1586	8	94495	0	94495	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTGCTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	75007349	75006297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75006928_75007327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000550	chr1	-	631	1	NIC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	94916	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTGCTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	75006928	75006297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_75006300_75006900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000551	chr1	-	345	1	Genic_Genomic	ENSMUSG00000033159.15	novel	NA	NA	NA	NA	6796	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTCCAGAAGTTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	75111539	75111194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_75111200_75111500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000552	chr1	-	904	1	ISM	ENSMUSG00000033159.15	ENSMUST00000168720.8	3669	9	5965	1216	5018	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGCCTTTTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75113317	75112413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75112400_75113300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000553	chr1	-	396	2	ISM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	283	5694	224	-5694	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACGAAGAAGGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75119058	75118108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75118148_75118701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000554	chr1	+	1173	3	ISM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	2465	538	2465	-538	intron_retention	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGGTGGTCGACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75121902	75124015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75121998_75122323_75122460_75123073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000555	chr1	+	781	2	ISM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	3790	434	3790	-434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTCCCACACTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	75123227	75124119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75123364_75123474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000556	chr1	+	1018	1	NIC	ENSMUSG00000049339.17	novel	2581	10	NA	NA	4102	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTGCCTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	75123539	75124557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_75123500_75124600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000557	chr1	-	1432	3	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	8811	-1	8811	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGGCATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75159756	75157508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75158576_75159235_75159382_75159537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000558	chr1	-	1282	4	ISM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	5035	4187	5035	-4187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGCTCTGGGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75163532	75161696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75161946_75162309_75162490_75162594_75162749_75162833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000559	chr1	+	253	2	ISM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	3754	3017	3722	836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGTATGGTGAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	75172557	75173014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75172593_75172796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000560	chr1	+	215	2	ISM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	4353	1686	4321	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGACCCTGGATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	75173156	75174345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75173314_75174287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000561	chr1	+	226	2	ISM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	6343	524	6311	-524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTATGGGACAGGGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	75175146	75175507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75175289_75175423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000562	chr1	+	210	1	ISM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	7018	0	6986	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	75175821	75176031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75175800_75176000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000563	chr1	+	300	2	ISM	ENSMUSG00000026201.13	ENST00000409516.7	736	5	1	1024	1	-1024	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGAGTCTCCTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75187880	75189651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75188059_75189529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000564	chr1	+	497	3	ISM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	401	2906	3	-1331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCTATTCATGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	75187882	75189344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75188059_75188568_75188789_75189243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000565	chr1	+	573	4	ISM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	1085	2378	687	-803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGCTTGTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75188566	75189872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75188789_75189243_75189378_75189529_75189651_75189776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000566	chr1	+	443	4	NNC	ENSMUSG00000026201.13	novel	2724	8	NA	NA	821	-803	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGCTTGTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75188700	75189872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_75188789_75189243_75189382_75189529_75189651_75189776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000567	chr1	+	1013	4	ISM	ENSMUSG00000026201.13	ENST00000409516.7	736	5	1729	-535	1729	535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCGGGTCTTTTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	75189608	75191210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75189651_75189776_75189873_75190219_75190342_75190457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000568	chr1	+	167	1	ISM	ENSMUSG00000026201.13	ENST00000409638.7	2724	8	3044	1577	2629	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTCACAGCTAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	75190508	75190675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75190500_75190700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000569	chr1	-	628	1	Genic_Genomic	ENSMUSG00000026202.14	novel	NA	NA	NA	NA	4440	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCTCCTTTTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	75191498	75190870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_75190900_75191500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000570	chr1	+	778	1	ISM	ENSMUSG00000026201.13	ENST00000409638.7	2724	8	4010	0	3595	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTAGCGGTCTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	75191474	75192252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75191500_75192300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000571	chr1	-	979	3	ISM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	1859	1760	1859	-1760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCTGCCATAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	75194079	75192631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75193238_75193470_75193620_75193855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000572	chr1	+	2499	4	ISM	ENSMUSG00000026203.17	ENSMUST00000187058.7	1732	9	4335	2	4335	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCGGTGGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	75217534	75222332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75217629_75217814_75217918_75218052_75218124_75220101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000573	chr1	+	2234	1	NIC	ENSMUSG00000026203.17	novel	1823	10	NA	NA	6900	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTCGGTGGCCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	75220099	75222333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_75220100_75222300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000574	chr1	+	235	2	ISM	ENSMUSG00000026203.17	ENSMUST00000055223.14	1199	8	7047	-74	6956	74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTCCTCTCCCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	75220155	75221522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75220306_75221437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000575	chr1	-	245	1	Genic_Genomic	ENSMUSG00000026209.16	novel	NA	NA	NA	NA	8806	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTTGAAATGGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	75284783	75284538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_75284500_75284800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000576	chr1	-	658	5	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	4378	-40	4378	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCCTCTGGAACCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	75289211	75285168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000577	chr1	-	147	1	NIC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	8234	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	75285355	75285208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_75285200_75285400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000578	chr1	-	248	2	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	3434	3839	3434	-3839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTTCATACCAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	75290155	75289047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75289210_75290069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000579	chr1	-	244	3	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	1712	4883	1712	-4883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACTCTACGACAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	75291877	75290091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75290154_75291007_75291086_75291773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000580	chr1	-	319	3	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	1194	6563	1194	-6563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTGGCTGTAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	75292395	75291771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75291882_75291988_75292065_75292262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000581	chr1	-	373	3	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	500	7054	500	-7054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCACATTCGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	75293089	75292262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75292394_75292588_75292715_75292973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000582	chr1	-	243	3	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	318	7464	318	-7464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGTGTTGAGACCTACGG	NA	NA	NA	NA	NA	NA	NA	NA	75293271	75292672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75292715_75292973_75293088_75293184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000583	chr1	-	321	2	ISM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	4	7976	4	-7976	intron_retention	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTAAGGGATAGCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75293585	75293184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75293274_75293353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000584	chr1	-	410	3	ISM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	73	8648	73	-7979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTACTAAGGGATAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	75294208	75293187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75293274_75293353_75293448_75293978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000585	chr1	+	653	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	332	5851	332	-5851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTCTAGCCTAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	75337304	75339372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75337637_75338801_75338863_75338956_75339053_75339208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000586	chr1	+	317	2	NNC	ENSMUSG00000026208.10	novel	3028	9	NA	NA	402	-6360	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCTCTTTGGTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	75337374	75338863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_75337637_75338808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000587	chr1	+	447	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1829	5558	1829	-5558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCCTCCCCATCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	75338801	75339665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75338863_75338956_75339053_75339208_75339371_75339537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000588	chr1	+	552	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	2040	4885	2040	-4885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCCAGGTGTAGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	75339012	75340338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75339053_75339208_75339371_75339537_75339664_75340114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000589	chr1	+	459	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	2584	1733	2584	-1733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCGGACCCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	75339556	75343490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75339664_75340114_75340336_75341971_75342016_75343403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000590	chr1	+	630	3	NNC	ENSMUSG00000026208.10	novel	3028	9	NA	NA	3180	-1239	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTACCAGAGAGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	75340152	75343984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_75340336_75343371_75343487_75343652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000591	chr1	+	536	4	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	3196	1329	3196	-1329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCAGGTGTCAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75340168	75343894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75340336_75341971_75342016_75343403_75343487_75343652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000592	chr1	+	386	1	Genic_Genomic	ENSMUSG00000026208.10	novel	NA	NA	NA	NA	7867	2	mono-exon	FALSE	NA	NA	NA	NA	NA	552	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGGCCATGATAACATA	NA	NA	NA	NA	NA	NA	NA	NA	75344839	75345225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_75344800_75345200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000593	chr1	-	468	2	FSM	ENSMUSG00000086053.2	ENSMUST00000132100.2	472	2	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATGAGCGTACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75373002	75368773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_75369090_75372850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000594	chr1	+	501	2	ISM	ENSMUSG00000026207.17	ENSMUST00000122266.3	917	4	1287	107	1287	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGAGTGCATGTGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	75378940	75380744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75379118_75380420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000595	chr1	+	509	1	Genic_Genomic	ENSMUSG00000026207.17	novel	NA	NA	NA	NA	3048	3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGCTGTGTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75380701	75381210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_75380700_75381200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000596	chr1	+	574	4	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	28	4818	28	-4816	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAACATGCGAGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	75412645	75415001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75412967_75413434_75413483_75413580_75413679_75414894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000597	chr1	+	568	5	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	2290	1602	2290	-1600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGATGGTATCTGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	75414907	75418217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000598	chr1	+	571	5	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	2909	1347	2909	-1345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTACCCCGTCCCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	75415526	75418472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000599	chr1	+	586	4	ISM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	6009	0	6009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTTGGACTCCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	75418626	75419819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_75418676_75418828_75418922_75419087_75419257_75419544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000600	chr1	-	1602	1	Genic_Genomic	ENSMUSG00000032997.17	novel	NA	NA	NA	NA	3102	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGAAACTGGTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	75452813	75451211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_75451200_75452800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000601	chr1	-	2606	4	FSM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	192	94	192	-88	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGAAAGGAGGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	75455723	75451306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000602	chr1	-	941	4	ISM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	3221	1869	3221	-1869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATCATCGTATTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75479784	75474848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_75474992_75476545_75476819_75478602_75478900_75479556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000603	chr1	-	411	3	ISM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	74035	0	74035	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAAGTGAACTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	78099395	78079444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_78079473_78098214_78098430_78099227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000604	chr1	-	443	3	ISM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	64358	18916	64358	-18916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCCTTCGAACGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	78109072	78098360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_78098430_78099227_78099394_78108864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000605	chr1	-	475	3	ISM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	2921	29419	2921	-29419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATGCCCGGATGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	78170509	78108863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_78109071_78169078_78169214_78170376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000606	chr1	-	485	3	ISM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	1305	89652	1305	-89652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCTGAGTGAGCGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	78172125	78169096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_78169214_78170376_78170507_78171887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000607	chr1	-	303	2	ISM	ENSMUSG00000004872.16	ENST00000409551.7	1627	9	1475	90962	1364	-90935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTACTGGGTCCATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	78172066	78170379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_78170504_78171887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000608	chr1	-	377	3	ISM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	9	91041	9	-91041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAAAATTGAGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	78173421	78170485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_78170507_78171887_78172124_78173301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000609	chr1	-	710	5	ISM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	26527	0	26489	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCCAGCGTGTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	78439007	78401704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000610	chr1	-	2094	2	FSM	ENSMUSG00000099364.3	ENSMUST00000190504.3	2091	2	9	-12	9	12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGACACAGCAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	78588069	78571650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_78573492_78587816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000611	chr1	+	1043	3	ISM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	45652	0	45602	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGGGGAAAACAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	78681201	78684743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_78681318_78682950_78683109_78683974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000612	chr1	+	865	1	ISM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	49054	0	48996	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTTCAGAGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78684595	78685460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_78684600_78685500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000613	chr1	-	442	1	FSM	ENSMUSG00000072978.4	ENSMUST00000049117.7	443	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCAAGGCCCCGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	78945796	78945354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_78945400_78945800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000614	chr1	-	455	3	FSM	ENSMUSG00000054702.15	ENST00000396653.2	451	3	-2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGGGGTAATTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	79649687	79591904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_79592058_79602821_79603003_79649566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000615	chr1	-	154	1	NIC	ENSMUSG00000054702.15	novel	2876	5	NA	NA	57626	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGCCTGGGGTAATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	79592059	79591905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_79591900_79592100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000616	chr1	-	247	2	NNC	ENSMUSG00000054702.15	novel	451	3	NA	NA	46759	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCCTGGGGTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	79602926	79591906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_79592049_79602821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000617	chr1	-	391	3	NIC	ENSMUSG00000054702.15	novel	451	3	NA	NA	58	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCCTGGGGTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	79649627	79591906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_79592058_79602823_79603003_79649566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000618	chr1	-	270	2	ISM	ENSMUSG00000054702.15	ENST00000396653.2	451	3	40	10905	40	-10905	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGAGAACCAAGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	79649645	79602811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_79603003_79649566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000619	chr1	-	1034	1	ISM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	58474	0	58474	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	79681012	79679978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_79680000_79681000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000620	chr1	-	1066	2	ISM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	55431	2338	55431	-2338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTTGTAGCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	79684055	79682316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_79683288_79683960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000621	chr1	+	1136	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	125	163	125	-163	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTTGTTTCACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79753859	79758999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000622	chr1	+	1176	4	NNC	ENSMUSG00000026248.10	novel	1424	4	NA	NA	240	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	79753974	79759162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_79754021_79755574_79756044_79757204_79757384_79758680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000623	chr1	+	1881	1	ISM	ENSMUSG00000099552.2	ENSMUST00000185548.2	2177	2	3221	0	3221	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGCTGTCTAGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	80167909	80169790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_80167900_80169800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000624	chr1	+	1737	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	48	57508	48	-29695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGAGCAATCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	81055498	81219684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_81055615_81064977_81065211_81169465_81169768_81218598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000625	chr1	+	1761	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	9597	30224	9597	-2411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCACGACCCTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	81065047	81246968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_81065211_81169465_81169768_81218598_81219685_81246758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000626	chr1	+	3078	4	ISM	ENSMUSG00000054976.15	ENST00000272907.7	3511	6	114052	-1	114052	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATCCTAACTACTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	81169502	81277193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_81169768_81218598_81219685_81246758_81246969_81275676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000627	chr1	+	1522	1	NIC	ENSMUSG00000054976.15	novel	4540	6	NA	NA	220222	2	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCTAACTACTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	81275672	81277194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_81275700_81277200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000628	chr1	+	1877	2	ISM	ENSMUSG00000026142.16	ENSMUST00000140020.2	3687	7	38572	711	38572	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGTCTGTAACCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	82355341	82422376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_82355426_82420583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000629	chr1	+	1833	1	ISM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	127082	0	104485	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	82421254	82423087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_82421300_82423100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000630	chr1	+	1218	5	ISM	ENSMUSG00000026150.15	ENSMUST00000073025.12	1706	8	6193	-7	1883	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTATGGAAAGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	82708832	82730115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_82709004_82713136_82713229_82724803_82724864_82728240_82728326_82729305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000631	chr1	+	1201	5	ISM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	10527	0	6188	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	82713137	82730111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000632	chr1	+	575	4	ISM	ENSMUSG00000026150.15	ENST00000392059.5	1659	8	8189	567	6188	74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTCCAGAGTGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	82713137	82729545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_82713229_82719538_82719698_82728240_82728326_82729305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000633	chr1	+	559	1	ISM	ENSMUSG00000026150.15	ENSMUST00000162003.8	2087	11	26885	3	22604	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTCTATGGAAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	82729553	82730112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_82729600_82730100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000634	chr1	-	547	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	112467	17	112467	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTTGCAGATTATAATTC	NA	NA	NA	NA	NA	NA	NA	NA	84703963	84702227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000635	chr1	-	581	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	106603	3633	106603	-3613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTATTGTCCCGTGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	84709827	84705843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84706011_84708252_84708418_84709343_84709499_84709733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000636	chr1	-	516	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	101647	6042	101647	-6022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCTGGAGAGATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	84714783	84708252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84708418_84709343_84709499_84709733_84709849_84714702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000637	chr1	-	515	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	99053	7522	99053	-7502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTCTGCTGTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	84717377	84709732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84709849_84714702_84714802_84716398_84716556_84717234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000638	chr1	-	552	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	95487	14217	95487	-14197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCGCCTAGATTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	84720943	84716427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84716556_84717234_84717378_84719907_84720060_84720814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000639	chr1	-	555	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	94689	15093	94689	-15073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAAGACCCTCTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	84721741	84717303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84717378_84719907_84720060_84720814_84720943_84721540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000640	chr1	-	518	3	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	89357	20525	89357	-20505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTTTCCGTATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	84727073	84722735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84722907_84724898_84725051_84726878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000641	chr1	-	663	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	86994	22688	86994	-22668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACCATTACCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	84729436	84724898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84725051_84726878_84727071_84728078_84728221_84729259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000642	chr1	-	591	4	ISM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	80771	27444	80771	-27424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAGGCCAAAATATTCC	NA	NA	NA	NA	NA	NA	NA	NA	84735659	84729654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84729702_84731991_84732200_84735137_84735257_84735442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000643	chr1	-	533	4	ISM	ENSMUSG00000026219.15	ENST00000389044.8	6401	42	78429	32953	77789	25364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAAAGTTACCTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	84738641	84735183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84735257_84735442_84735672_84736694_84736768_84738483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000644	chr1	-	1263	5	ISM	ENSMUSG00000026219.15	ENST00000409677.5	1392	6	24355	33	23763	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGACAGATGAAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	84792667	84760580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000645	chr1	+	350	3	NNC	ENSMUSG00000073633.10	novel	901	4	NA	NA	64	-3825	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACAGTCCCTGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	84817625	84874383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_84817694_84858812_84858922_84874210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000646	chr1	+	577	3	ISM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	41248	199	41248	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAGATTTTGCACACACA	NA	NA	NA	NA	NA	NA	NA	NA	84858809	84878009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_84858922_84874210_84874384_84877717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000647	chr1	+	326	1	Genic_Genomic	ENSMUSG00000073633.10	novel	NA	NA	NA	NA	60322	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTCTGGTTTGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	84877883	84878209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_84877900_84878200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000648	chr1	+	879	4	ISM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	13	2201	13	-1885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACCACCATCGTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	85822014	85834195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000649	chr1	+	942	4	ISM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	10923	648	10585	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGACTTTTTTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	85832924	85835748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_85833124_85834142_85834254_85834728_85834880_85835267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000650	chr1	+	543	1	Genic_Genomic	ENSMUSG00000026223.16	novel	NA	NA	NA	NA	13525	11	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAACCTCTTCTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	85835864	85836407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_85835900_85836400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000651	chr1	+	433	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	29	67168	-14	-67168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTATTATAGGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	85992369	85999705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000652	chr1	+	640	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	5963	61651	5920	-61651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCACTCTGATTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	85998303	86005222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000653	chr1	+	581	3	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	11176	60357	11133	-60357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCAGTATCTTCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	86003516	86006516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86003727_86005077_86005222_86006289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000654	chr1	+	563	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	12737	55874	12694	-55874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGTGTTCTGTTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	86005077	86010999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86005222_86006289_86006517_86009758_86009820_86010868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000655	chr1	+	404	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	13999	53933	13956	-53933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGCAAACTCATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	86006339	86012940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86006517_86009758_86009820_86010868_86010998_86012903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000656	chr1	+	470	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	18529	52403	18486	-52403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATTAGGGTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86010869	86014470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86010998_86012903_86012993_86013751_86013831_86014296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000657	chr1	+	655	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	20560	48960	20517	-48960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTCTACTTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86012900	86017913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000658	chr1	+	444	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	24217	44810	24174	-44810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTTCTAACTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	86016557	86022063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86016643_86017715_86017913_86019724_86019821_86021997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000659	chr1	+	515	5	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	25431	20544	25388	-20544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATCACGTGTCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	86017771	86046329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000660	chr1	+	509	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	51953	10845	51910	-10845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGTGAGTCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	86044293	86056028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86044412_86046231_86046349_86054177_86054281_86055857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000661	chr1	+	458	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	61833	6350	61790	-6350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTATACCTCTGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	86054173	86060523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86054281_86055857_86056028_86058358_86058452_86060435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000662	chr1	+	358	3	ISM	ENSMUSG00000026229.18	ENST00000409643.6	3060	23	61839	5555	61792	-5431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGCCCAGCTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	86054175	86061442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86054281_86055857_86056028_86061359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000663	chr1	+	574	4	ISM	ENSMUSG00000026229.18	ENST00000677259.1	3159	24	63518	2158	63465	-2034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCTCGCTCACAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	86055848	86064839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86056028_86058358_86058452_86061359_86061507_86064684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000664	chr1	+	450	4	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	63512	5419	63469	-5419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGGTCTTAAGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	86055852	86061454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86056028_86058358_86058452_86060435_86060523_86061359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000665	chr1	+	429	3	ISM	ENSMUSG00000026229.18	ENST00000409643.6	3060	23	63542	2180	63495	-2056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCGATGACTAAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	86055878	86064817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86056028_86061359_86061507_86064684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000666	chr1	+	376	3	ISM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	68107	2035	68064	-2035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCTCGCTCACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	86060447	86064838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86060523_86061359_86061507_86064684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000667	chr1	+	499	3	ISM	ENSMUSG00000026229.18	ENST00000373635.9	3131	24	68974	31	68974	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATCTCCACATTGACC	NA	NA	NA	NA	NA	NA	NA	NA	86061357	86066997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86061507_86064684_86064839_86066801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000668	chr1	+	552	4	ISM	ENSMUSG00000094638.2	ENST00000440107.6	832	6	17	6898	17	-6898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGACCCCTGGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	86087731	86097742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000669	chr1	+	708	5	ISM	ENSMUSG00000094638.2	ENST00000440107.6	832	6	2665	0	2665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGAGAGACGGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	86090379	86104640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000670	chr1	+	657	7	ISM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	34281	0	34281	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGAAGGCTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86121995	86140827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000671	chr1	+	458	4	ISM	ENSMUSG00000062590.14	ENST00000682334.1	2030	18	47959	0	47959	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAATGCATAATAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	86135673	86180182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86135766_86140771_86140828_86172287_86172393_86179977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000672	chr1	-	592	1	ISM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	14090	0	14088	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATCTGGGTGTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86273032	86272440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_86272400_86273000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000673	chr1	-	986	4	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	7166	-383	7134	383	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGATGGTTGCACATGCC	NA	NA	NA	NA	NA	NA	NA	NA	86279986	86277850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000674	chr1	-	1021	5	ISM	ENSMUSG00000026234.13	ENST00000678246.1	2344	14	1943	4526	1943	-4526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGATAGTAAGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	86285177	86282759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000675	chr1	-	709	3	ISM	ENSMUSG00000026234.13	ENST00000678246.1	2344	14	1172	6137	1172	-6137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGATGATGAGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	86285948	86284370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_86284464_86284678_86285175_86285828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000676	chr1	-	791	3	ISM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	10	6482	10	-6482	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGATGAGGAAGATGATGA	NA	NA	NA	NA	NA	NA	NA	NA	86287142	86284715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_86285175_86285828_86285946_86286927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000677	chr1	+	876	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	-1	341	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTACTTCAGACTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	86454446	86458093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000678	chr1	+	325	3	NNC	ENSMUSG00000026238.15	novel	593	5	NA	NA	-22	-658	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGTAGTCTTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86454506	86457273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_86454673_86456894_86456967_86457186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000679	chr1	+	323	3	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2659	-79	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCACCCACAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	86457187	86457852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_86457279_86457460_86457527_86457686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000680	chr1	+	328	3	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2662	-79	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCACCCACAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	86457190	86457852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_86457275_86457452_86457531_86457686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000681	chr1	+	319	3	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	2666	-84	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGGCAATGCCACCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	86457194	86457847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_86457279_86457452_86457527_86457686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000682	chr1	+	752	1	Genic_Genomic	ENSMUSG00000026238.15	novel	NA	NA	NA	NA	3158	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1651	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCTGTGTGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	86457686	86458438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_86457700_86458400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000683	chr1	-	289	1	Genic_Genomic	ENSMUSG00000026239.15	novel	NA	NA	NA	NA	39267	2	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGACTGTGACTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	86471002	86470713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_86470700_86471000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000684	chr1	-	451	3	ISM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	35763	373	35763	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATAGACGGCCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	86474506	86471088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_86471306_86473423_86473530_86474378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000685	chr1	-	322	3	ISM	ENSMUSG00000026239.15	ENSMUST00000146220.2	879	4	34930	309	34930	-309	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAGGGCCCAGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	86475339	86473422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_86473530_86474378_86474505_86475250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000686	chr1	-	448	3	ISM	ENSMUSG00000026239.15	ENSMUST00000146220.2	879	4	14	1266	14	-1266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTCTGCCCCATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	86510255	86474379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_86474505_86475250_86475340_86510021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000687	chr1	+	783	5	FSM	ENSMUSG00000026240.13	ENST00000409091.5	784	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCCAGGGCCTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	86510642	86532988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_86510819_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000688	chr1	+	1058	7	NNC	ENSMUSG00000026240.13	novel	1067	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGCAGTGAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	86510645	86533017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000689	chr1	+	1052	7	FSM	ENSMUSG00000026240.13	ENST00000410024.5	1067	7	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGCAGTGAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	86510656	86533017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000690	chr1	+	1718	4	ISM	ENSMUSG00000026240.13	ENST00000373608.7	2455	6	7592	478	7592	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATTATATGGGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	86524470	86534061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86524562_86526724_86526928_86528804_86528947_86532779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000691	chr1	+	1314	1	ISM	ENSMUSG00000026240.13	ENSMUST00000121534.8	5383	8	22603	2555	16350	3	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTCCATATCCTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	86533228	86534542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_86533200_86534500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000692	chr1	+	737	1	Genic_Genomic	ENSMUSG00000026240.13	novel	NA	NA	NA	NA	19500	18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGGCTTAGTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	86536378	86537115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_86536400_86537100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000693	chr1	-	505	1	FSM	ENSMUSG00000084106.5	ENSMUST00000120149.2	891	1	387	-1	387	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTAACCTAATTAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	86837018	86836513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_86836500_86837000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000694	chr1	-	359	2	FSM	ENSMUSG00000100940.2	ENST00000407532.2	358	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCCAAATGTTAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87044877	87044042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_87044287_87044762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000695	chr1	-	254	1	NIC	ENSMUSG00000100940.2	novel	358	2	NA	NA	580	0	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCCAAATGTTAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87044296	87044042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_87044000_87044300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000696	chr1	+	455	3	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	1638	5085	1638	-5085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCAGGCGACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	87120203	87122706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87120364_87120567_87120678_87122521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000697	chr1	+	298	2	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	3956	4488	3956	-4488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTGGTAGGCAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	87122521	87123303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87122723_87123206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000698	chr1	+	322	2	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	4839	2580	4839	-2580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTGGTAGCCTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	87123404	87125211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87123520_87125004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000699	chr1	+	328	2	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	6436	2375	6436	-2375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCGACCTGAGACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	87125001	87125416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87125210_87125296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000700	chr1	+	320	2	ISM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	6733	1287	6733	-1287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGACAGCAGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	87125298	87126504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87125416_87126301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000701	chr1	+	253	1	ISM	ENSMUSG00000026251.14	ENSMUST00000073252.9	2925	12	9181	0	8974	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCTTGTGGTAATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	87127539	87127792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87127500_87127800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000702	chr1	+	1614	3	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	4744	86	4744	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAGTTTTACTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	87138276	87140330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87138463_87138624_87138759_87139036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000703	chr1	+	1287	1	Genic_Genomic	ENSMUSG00000026253.15	novel	NA	NA	NA	NA	5627	30	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCAGTGGTGGCACACG	NA	NA	NA	NA	NA	NA	NA	NA	87139159	87140446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_87139200_87140400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000704	chr1	+	1553	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	19	-453	19	-339	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCTCTCTGGTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	87142026	87156239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000705	chr1	+	976	4	ISM	ENSMUSG00000026254.18	ENST00000409167.7	1345	5	5640	290	5318	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGAAGTACTGTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	87147325	87154444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87147418_87152074_87152180_87153571_87153725_87153818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000706	chr1	+	658	1	Genic_Genomic	ENSMUSG00000026254.18	novel	NA	NA	NA	NA	12074	5	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTCAGTGTCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87154081	87154739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_87154100_87154700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000707	chr1	+	778	1	Genic_Genomic	ENSMUSG00000026254.18	novel	NA	NA	NA	NA	13796	3	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGTTGTCTGAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	87155803	87156581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_87155800_87156600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000708	chr1	+	919	2	ISM	ENSMUSG00000026254.18	ENSMUST00000113235.8	3473	8	18494	1798	18122	-1798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGAAGCAATGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	87160129	87166412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87160204_87165567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000709	chr1	+	1098	1	ISM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	25477	0	25105	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGTCTCCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87167112	87168210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87167100_87168200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000710	chr1	+	1316	2	ISM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	33264	0	33264	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTGCCTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	87225348	87238561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87225486_87237382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000711	chr1	+	738	5	FSM	ENSMUSG00000048000.16	ENST00000464402.5	508	5	20	-250	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTAAACAATGCTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	87254771	87283139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_87254815_87261991_87262057_87268879_87268990_87282125_87282209_87282702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000712	chr1	+	507	4	FSM	ENSMUSG00000048000.16	ENST00000492910.5	649	4	23	119	22	116	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATGTAATTCCTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	87254773	87283020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000713	chr1	+	447	3	ISM	ENSMUSG00000048000.16	ENST00000490612.5	506	4	7237	-1	7237	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAATTGGAATAGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	87261988	87282905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87262057_87282042_87282209_87282692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000714	chr1	+	350	3	ISM	ENSMUSG00000048000.16	ENST00000464402.5	508	5	14119	39	-13297	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATTCATACTTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	87268870	87282850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87268990_87282125_87282209_87282702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000715	chr1	+	332	2	ISM	ENSMUSG00000048000.16	ENST00000464402.5	508	5	27293	19	-123	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCTTTGGTAATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	87282044	87282870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87282209_87282702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000716	chr1	-	439	2	Antisense	novelGene_ENSMUSG00000048000.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACAGAAGCATATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	87283060	87282122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_-_87282202_87282700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000717	chr1	-	259	2	Antisense	novelGene_ENSMUSG00000048000.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTTTTGAAAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	87282904	87282161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_-_87282202_87282685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000718	chr1	+	450	1	Genic_Genomic	ENSMUSG00000048000.16	novel	NA	NA	NA	NA	524	2	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAACAATGCTGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	87282691	87283141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_87282700_87283100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000719	chr1	+	528	3	ISM	ENSMUSG00000048000.16	ENSMUST00000174501.8	3876	27	49254	41690	49254	-41690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGCCATTTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87331421	87335177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_87331569_87334705_87334924_87335014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000720	chr1	-	333	2	ISM	ENSMUSG00000005501.15	ENST00000427112.6	3519	28	18455	36045	18455	-36045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCAGTTCCAGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	87916716	87913698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_87913922_87916606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000721	chr1	+	612	2	Fusion	ENSMUSG00000083478.2_ENSMUSG00000090124.8	novel	3231	5	NA	NA	228	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCAAGGTACACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	87953160	88023691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Fusion_chr1_+_87953237_88023155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000722	chr1	+	808	2	FSM	ENSMUSG00000090124.8	ENST00000447084.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCAAGGTACACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	87983241	88023691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_87983514_88023155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000723	chr1	+	686	2	NNC	ENSMUSG00000090124.8	novel	808	2	NA	NA	129	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCAAGGTACACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	87983370	88023691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_87983514_88023148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000724	chr1	+	612	2	NNC	ENSMUSG00000090124.8	novel	3231	5	NA	NA	15539	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAGGTACACCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	87998780	88023692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_87998856_88023155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000725	chr1	+	562	1	ISM	ENSMUSG00000090124.8	ENSMUST00000058237.14	3231	5	345	124032	345	1	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAGGTACACCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	88023130	88023692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88023100_88023700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000726	chr1	+	215	1	Genic_Genomic	ENSMUSG00000090124.8	novel	NA	NA	NA	NA	116546	10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTAATGCCAGACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	88147519	88147734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_88147500_88147700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000727	chr1	+	287	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	8	29556	8	-29556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGGCCCTGGATTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	88155976	88158196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88156131_88158063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000728	chr1	+	297	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	2093	29242	2093	-29242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGGTCTGAGATCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	88158061	88158510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88158196_88158347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000729	chr1	+	420	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	2377	26558	2377	-26558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCGCAGTGCTCGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	88158345	88161194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88158511_88159965_88160065_88161038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000730	chr1	+	299	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	5069	25883	5069	-25883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGCCAGACTCAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	88161037	88161869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88161191_88161723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000731	chr1	+	318	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	5753	24762	5753	-24762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTCTGCAGGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	88161721	88162990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88161868_88162691_88162785_88162911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000732	chr1	+	255	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	6754	24544	6754	-24544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCAGCTGCAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	88162722	88163208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88162785_88162911_88162991_88163094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000733	chr1	+	221	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	6995	23296	6995	-23296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAAGGGGACCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	88162963	88164456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88162991_88163094_88163209_88164376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000734	chr1	+	293	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	7144	22438	7144	-22438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCCCCAGCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	88163112	88165314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88163209_88164376_88164454_88165194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000735	chr1	+	269	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	8448	22074	8448	-22074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCACTCCCCACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	88164416	88165678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88164454_88165194_88165315_88165566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000736	chr1	+	331	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	9274	20989	9274	-20989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGCATCCCTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	88165242	88166763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88165315_88165566_88165678_88166615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000737	chr1	+	218	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	9683	19868	9683	-19868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTGACATACCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	88165651	88167884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88165678_88166615_88166764_88167840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000738	chr1	+	326	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	10643	19219	10643	-19219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAAGGTGAAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	88166611	88168533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88166764_88167840_88167882_88168400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000739	chr1	+	310	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	12426	18379	12426	-18379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCCTCGTAGGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	88168394	88169373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88168543_88168792_88168846_88169264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000740	chr1	+	354	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	13293	17239	13293	-17239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCTCCTCACCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	88169261	88170513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88169373_88170125_88170246_88170390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000741	chr1	+	280	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	14419	15946	14419	-15946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCCACATACAGGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	88170387	88171806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88170514_88171652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000742	chr1	+	357	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	15683	13963	15683	-13963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTGGGGCGGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88171651	88173789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88171806_88172665_88172789_88173709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000743	chr1	+	255	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	16754	12786	16754	-12786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGATTCCTTCCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	88172722	88174966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88172789_88173709_88173790_88174857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000744	chr1	+	307	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	18887	11379	18887	-11379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGAGTCCAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	88174855	88176373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88174967_88175469_88175566_88176273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000745	chr1	+	194	2	NNC	ENSMUSG00000079429.10	novel	4915	40	NA	NA	19502	-11374	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCAGGGACCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	88175470	88176378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_88175560_88176273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000746	chr1	+	311	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	19518	10201	19518	-10201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGAGGCAGGACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	88175486	88177551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88175566_88176273_88176379_88177424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000747	chr1	+	246	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	21456	9644	21456	-9644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGGGCTGTGCTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88177424	88178108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88177549_88177986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000748	chr1	+	276	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	22016	8631	22016	-8631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGCTCAGCAGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	88177984	88179121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88178106_88178966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000749	chr1	+	309	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	22997	7540	22997	-7540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCCATGGGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88178965	88180212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88179120_88180057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000750	chr1	+	309	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	24086	5022	24086	-5022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGATGGTGAGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	88180054	88182730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88180213_88182579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000751	chr1	+	356	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	26604	4752	26604	-4752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGTGCTCAAGGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	88182572	88183000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88182740_88182811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000752	chr1	+	334	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	26842	4349	26842	-4349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCCAGGTCTGACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	88182810	88183403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88183006_88183264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000753	chr1	+	401	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	27294	3479	27294	-3479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAACTGGCCTTGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	88183262	88184273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88183403_88183778_88183888_88184121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000754	chr1	+	334	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	28153	3196	28153	-3196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCCAGACAAGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	88184121	88184556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88184272_88184372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000755	chr1	+	339	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	28402	2167	28402	-2167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAACACGCCCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	88184370	88185585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88184556_88185431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000756	chr1	+	392	3	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	29463	808	29463	-808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACACGTGTCCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	88185431	88186944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88185588_88186304_88186437_88186840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000757	chr1	+	170	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	30871	435	30871	-435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGTAGCGTGGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	88186839	88187317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88186944_88187251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000758	chr1	+	194	2	ISM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	31281	0	31281	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGATGCGAGTGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	88187249	88187752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_88187318_88187626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000759	chr1	+	127	1	NIC	ENSMUSG00000079429.10	novel	7526	43	NA	NA	31657	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGATGCGAGTGAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	88187625	88187752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_88187600_88187800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000760	chr1	-	611	1	ISM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	14552	0	14425	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGGGTGCAGGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	88190803	88190192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_88190200_88190800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000761	chr1	-	4001	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	-4	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGGAGGCGTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88629947	88625946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_88625900_88629900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000762	chr1	+	1609	1	FSM	ENSMUSG00000102700.2	ENSMUST00000195426.2	1746	1	143	-6	143	6	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAAAATCATTATGACT	NA	NA	NA	NA	NA	NA	NA	NA	89024937	89026546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_89024900_89026500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000763	chr1	+	439	2	ISM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	67265	11204	67265	-11204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGACCGATGACCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	89065401	89071586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89065526_89071271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000764	chr1	+	439	2	ISM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	75176	2746	75176	-2746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGCAACAGATGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	89073312	89080044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89073629_89079921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000765	chr1	+	407	1	ISM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	84247	0	84247	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGACATTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	89082383	89082790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89082400_89082800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000766	chr1	+	2182	1	FSM	ENSMUSG00000104114.2	ENSMUST00000192974.2	2384	1	249	-47	249	47	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTCATGTGTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	89411408	89413590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_89411400_89413600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000767	chr1	+	1097	4	ISM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	531	263408	531	-75755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGCCCCCCGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89508488	89555545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000768	chr1	+	615	4	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	20	46720	20	-45639	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAACTCACAGATGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89716901	89770966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89717047_89762155_89762311_89765433_89765525_89770742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000769	chr1	+	727	4	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	45272	2203	45272	-1122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCTGCTGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	89762153	89815483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89762311_89765433_89765525_89770742_89770966_89815227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000770	chr1	+	1373	3	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	53861	380	53861	-380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTCCAGCCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	89770742	89817306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89770966_89815227_89815484_89816412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000771	chr1	+	673	3	ISM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	98343	-2	98343	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATAAATATGCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	89815224	89817688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89815484_89816412_89816536_89817397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000772	chr1	+	2364	3	ISM	ENSMUSG00000055013.17	ENST00000428334.6	4332	18	282926	-1	98363	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTCCGCTGCCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	89815244	89818973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_89815484_89816412_89817902_89818337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000773	chr1	-	1019	2	Antisense	novelGene_ENSMUSG00000055013.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAAGCTGGTACTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89818602	89817142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_-_89817903_89818343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000774	chr1	+	279	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	47	2739	47	-2739	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCTGGGTGAATATCCA	NA	NA	NA	NA	NA	NA	NA	NA	90131748	90141734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_90131810_90141516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000775	chr1	+	236	1	ISM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	12536	0	12536	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTACATCCTTTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	90144237	90144473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_90144200_90144500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000776	chr1	+	643	7	FSM	ENSMUSG00000034432.12	ENST00000409334.5	651	7	9	-1	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAGTTTTATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	90531201	90540026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90538696_90538760_90539261_90539310_90539895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000777	chr1	-	355	1	ISM	ENSMUSG00000048126.17	ENSMUST00000097653.11	9001	41	76738	0	63045	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGGTCTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90694936	90694581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_90694600_90694900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000778	chr1	-	365	2	ISM	ENSMUSG00000048126.17	ENSMUST00000097653.11	9001	41	68158	6740	54465	-6740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAACCTCGGCCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	90703516	90701321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_90701423_90703252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000779	chr1	-	373	2	ISM	ENSMUSG00000048126.17	ENSMUST00000097653.11	9001	41	41568	34608	27875	6001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGGACATCATCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	90730106	90729189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_90729270_90729813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000780	chr1	-	360	2	ISM	ENSMUSG00000048126.17	ENSMUST00000097653.11	9001	41	39997	35789	26304	4820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTTAGGAGGGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	90731677	90730370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_90730414_90731360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000781	chr1	-	369	1	NIC	ENSMUSG00000048126.17	novel	8285	41	NA	NA	22427	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGGTGGGGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	90735554	90735185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_90735200_90735600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000782	chr1	-	2907	5	ISM	ENSMUSG00000048126.17	ENST00000392003.6	3086	6	13791	-5	13791	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGGTGGGGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	90744190	90735185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000783	chr1	-	384	2	ISM	ENSMUSG00000048126.17	ENSMUST00000097653.11	9001	41	27940	44650	14247	-4041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCAGTTCCTGGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	90743734	90739231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_90739554_90743672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000784	chr1	-	362	3	ISM	ENSMUSG00000048126.17	ENSMUST00000097653.11	9001	41	8	49629	8	-9020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTGGGGCCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	90771666	90744210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_90744258_90757864_90757981_90771467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000785	chr1	+	909	3	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	53842	2048	53710	-2048	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGCCATCGTTCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	91035017	91042989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91035113_91039877_91040020_91042317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000786	chr1	+	697	1	ISM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	63165	0	63033	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	91044340	91045037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91044300_91045000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000787	chr1	+	1097	5	ISM	ENSMUSG00000034343.15	ENST00000409332.5	1061	8	22121	-263	22121	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTCGATTGCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	91204105	91213896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000788	chr1	+	872	1	NIC	ENSMUSG00000034343.15	novel	1431	8	NA	NA	31040	0	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTCGATTGCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	91213024	91213896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_91213000_91213900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000789	chr1	+	2770	1	ISM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	37231	0	33305	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGTGTTTTAGTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	91215289	91218059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91215300_91218100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000790	chr1	+	2084	3	NNC	ENSMUSG00000049515.13	novel	2082	3	NA	NA	-8	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCTGGAACCCAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	91270286	91295207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_91270458_91272042_91273940_91295191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000791	chr1	+	2084	2	ISM	ENSMUSG00000049515.13	ENSMUST00000176156.2	2886	8	20435	-293	-5	293	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGGTGGTCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91270289	91273952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91270458_91272036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000792	chr1	+	2085	3	FSM	ENSMUSG00000049515.13	ENST00000409506.1	2082	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGGAACCCAGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	91270293	91295209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_91270458_91272036_91273940_91295191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000793	chr1	+	2067	2	NNC	ENSMUSG00000049515.13	novel	2082	3	NA	NA	2	289	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGCTCAGGTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	91270296	91273948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_91270458_91272042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000794	chr1	+	567	2	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	5	8359	5	-8359	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCAGCTGGATGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	91278742	91281779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91278858_91281327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000795	chr1	+	580	2	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	2994	6828	2994	-6828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACCTGCCATGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	91281731	91283310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91282175_91283173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000796	chr1	+	609	3	ISM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	7871	1035	7871	-1035	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAGATGACACAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	91286608	91289103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91286699_91287057_91287204_91288730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000797	chr1	+	500	1	Genic_Genomic	ENSMUSG00000026308.9	novel	NA	NA	NA	NA	10902	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTCTGCTACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	91289639	91290139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_91289600_91290100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000798	chr1	+	782	1	ISM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	7006	0	7006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCATTCTCTGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	91301157	91301939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_91301200_91301900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000799	chr1	-	758	6	ISM	ENSMUSG00000026309.15	ENST00000622223.4	937	9	14052	-4	14052	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	91312380	91303552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000800	chr1	-	1338	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCCAATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	91340946	91339203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000801	chr1	-	1264	4	NNC	ENSMUSG00000067071.9	novel	1335	4	NA	NA	63	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCCAATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	91340881	91339203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_91340205_91340442_91340525_91340614_91340693_91340778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000802	chr1	-	1317	4	NIC	ENSMUSG00000067071.9	novel	1335	4	NA	NA	13	1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCCAATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	91340931	91339203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_91340205_91340442_91340519_91340614_91340702_91340778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000803	chr1	-	432	1	NIC	ENSMUSG00000067071.9	novel	1335	4	NA	NA	498	2	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCAGGGACCTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	91340205	91339773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_91339800_91340200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000804	chr1	-	292	3	FSM	ENSMUSG00000067071.9	ENST00000409574.1	516	3	9	215	9	-215	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGATCTGCTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	91340694	91340034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_91340205_91340482_91340525_91340614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000805	chr1	-	267	2	FSM	ENSMUSG00000067071.9	ENST00000409160.7	838	2	1	570	1	-526	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAAGGGCTTCCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	91340702	91340345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_91340525_91340614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000806	chr1	+	1329	2	FSM	ENSMUSG00000007805.5	ENSMUST00000007949.4	1329	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCGTGTCCCCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	91729182	91775750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_91729872_91775110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000807	chr1	+	1272	2	FSM	ENSMUSG00000007805.5	ENST00000612363.2	1271	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCACAGCCCCGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	91729223	91775737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_91729888_91775129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000808	chr1	+	1267	2	NNC	ENSMUSG00000007805.5	novel	1271	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCACAGCCCCGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	91729225	91775737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_91729885_91775129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000809	chr1	+	1260	2	NNC	ENSMUSG00000007805.5	novel	1271	2	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCACAGCCCCGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	91729230	91775737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_91729883_91775129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000810	chr1	-	729	1	ISM	ENSMUSG00000026313.17	ENSMUST00000097644.9	8100	27	250834	0	218886	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTACCTCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	91857229	91856500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_91856500_91857200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000811	chr1	-	322	4	ISM	ENSMUSG00000026260.13	ENST00000678914.1	729	7	7734	0	7734	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCCCCTCCGCCCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	92390069	92367559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000812	chr1	-	348	5	ISM	ENSMUSG00000026260.13	ENST00000678914.1	729	7	2698	12181	2698	-12181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGAGGTGAGCCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	92395105	92379740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92395079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000813	chr1	-	403	3	ISM	ENSMUSG00000026260.13	ENST00000678914.1	729	7	1	23245	1	-23245	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGTGAGCCCAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	92397802	92390804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_92390880_92395079_92395190_92397584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000814	chr1	-	439	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGCTTTTAGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	92569707	92564865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_92565126_92567408_92567482_92569601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000815	chr1	-	275	1	Genic_Genomic	ENSMUSG00000073616.11	novel	NA	NA	NA	NA	3146	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGCTTTTAGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	92565140	92564865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_92564900_92565100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000816	chr1	-	390	3	NNC	ENSMUSG00000073616.11	novel	438	3	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	92569662	92564866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_92565126_92567408_92567471_92569593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000817	chr1	-	634	3	FSM	ENSMUSG00000073616.11	ENSMUST00000112999.8	653	3	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTGTGCTTTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	92568270	92564869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_92565126_92567408_92567482_92567965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000818	chr1	+	1823	5	ISM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	25365	1163	25365	-1163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGCTCAGGGCACCACT	NA	NA	NA	NA	NA	NA	NA	NA	92784731	92787338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000819	chr1	+	1322	1	Genic_Genomic	ENSMUSG00000034220.8	novel	NA	NA	NA	NA	27816	3	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTGTGCTTTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	92787182	92788504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_92787200_92788500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000820	chr1	-	828	4	FSM	ENSMUSG00000034212.15	ENST00000405002.5	825	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCAGGTCAGCCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	92835150	92813865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_92814017_92823790_92823935_92827220_92827388_92834784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000821	chr1	-	666	3	NNC	ENSMUSG00000034212.15	novel	825	4	NA	NA	4	-9927	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGAGGAGATGCCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	92835144	92823793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_92823935_92827220_92827386_92834784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000822	chr1	+	611	2	FSM	ENSMUSG00000047067.8	ENSMUST00000060913.8	1314	2	267	436	267	-436	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACTTCTGGTCCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	92834969	92835721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_92835146_92835286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000823	chr1	+	497	1	ISM	ENSMUSG00000047067.8	ENSMUST00000060913.8	1314	2	958	0	958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGAGTTGCTCTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	92835660	92836157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92835700_92836200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000824	chr1	+	488	2	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	285	5711	285	-5711	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAACCGCTCCTTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	92838789	92842852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92839206_92842780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000825	chr1	+	636	3	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	8086	1022	8086	-1022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTCTCTCAGGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	92846590	92847541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92846826_92846905_92847049_92847283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000826	chr1	+	453	1	ISM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	9606	0	9606	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTTTAGTCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	92848110	92848563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92848100_92848600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000827	chr1	+	510	3	ISM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	69	1452	69	-1452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATGATATAGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	92862556	92867242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92862737_92865666_92865799_92867044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000828	chr1	+	417	2	ISM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	4557	470	1381	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTATGGCTACAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	92867044	92868224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92867242_92868004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000829	chr1	+	527	3	ISM	ENSMUSG00000026270.12	ENST00000404753.7	2212	10	2341	4467	2341	2494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGCTGCCGCCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	92868004	92871188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92868223_92870203_92870346_92871021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000830	chr1	+	454	1	Genic_Genomic	ENSMUSG00000026270.12	novel	NA	NA	NA	NA	2579	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGACCTGCTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	92868242	92868696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_92868200_92868700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000831	chr1	+	490	3	ISM	ENSMUSG00000026270.12	ENST00000404753.7	2212	10	4615	3999	4615	2962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGGTAACTCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	92870278	92871656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92870346_92871021_92871189_92871400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000832	chr1	+	443	2	ISM	ENSMUSG00000026270.12	ENST00000404753.7	2212	10	5734	3062	5734	-3062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCACTGGGAAAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	92871397	92872593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92871664_92872416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000833	chr1	+	460	2	ISM	ENSMUSG00000026270.12	ENST00000404753.7	2212	10	6751	2662	6751	-2662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAGGTGAGTTAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	92872414	92872993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92872620_92872738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000834	chr1	+	464	2	ISM	ENSMUSG00000026270.12	ENST00000404753.7	2212	10	7075	958	7075	-958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTCCAGGCCTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	92872738	92874697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92873001_92874495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000835	chr1	+	425	2	ISM	ENSMUSG00000026270.12	ENST00000404753.7	2212	10	8829	203	8829	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAACTCCCAAGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	92874492	92875452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92874696_92875230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000836	chr1	+	314	1	ISM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	13245	7	9679	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTATGGATTAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	92875342	92875656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_92875300_92875700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000837	chr1	-	1194	3	ISM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	891	-1	839	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGAGTCTTTTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	93232746	93228925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_93229518_93230439_93230625_93232329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000838	chr1	-	2093	6	ISM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	8407	3223	8407	-3223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTGTGGACTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	93255158	93247722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000839	chr1	+	1027	1	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	29609	0	29559	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTTCGTCTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	93300184	93301211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93300200_93301200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000840	chr1	+	335	3	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	12093	12269	12093	-12269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAATTCACAGAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	93418875	93425186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93419000_93423300_93423388_93425062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000841	chr1	+	340	3	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	16524	10587	16524	-10587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGTTGTTTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	93423306	93426868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93423388_93425062_93425187_93426733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000842	chr1	+	322	3	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	18335	10343	18335	-10343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAGAAAGGAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	93425117	93427112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93425187_93426733_93426869_93426994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000843	chr1	+	326	3	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	19981	9173	19981	-9173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGCTAACTTTAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	93426763	93428282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93426869_93426994_93427113_93428179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000844	chr1	+	367	3	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	20211	8081	20211	-8081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACATTTGGCGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	93426993	93429374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93427113_93428179_93428282_93429228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000845	chr1	+	290	3	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	22444	4132	22444	-4132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTAGAATGGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	93429226	93433323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93429375_93431156_93431241_93433265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000846	chr1	+	2275	4	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	24383	-1	24383	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGTCCTCTTTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	93431165	93437456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93431241_93433265_93433324_93434684_93434805_93435434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000847	chr1	+	2023	1	NIC	ENSMUSG00000026276.21	novel	3779	13	NA	NA	28748	-526	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGTCCTCTTTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	93435433	93437456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_93435400_93437500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000848	chr1	-	1865	1	Genic_Genomic	ENSMUSG00000026277.15	novel	NA	NA	NA	NA	14115	8	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCACTTACAAACCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	93549329	93547464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_93547500_93549300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000849	chr1	-	2052	3	ISM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	11096	935	11096	-935	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATGAATGGCAGCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	93552348	93548407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_93550249_93551117_93551255_93552274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000850	chr1	+	1462	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGACTCTACTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	93613387	93623486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000851	chr1	-	793	2	ISM	ENSMUSG00000026279.15	ENSMUST00000189728.7	713	5	16977	-472	16977	472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTATCTCAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	93642671	93632636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_93633378_93642619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000852	chr1	+	271	3	ISM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	13150	16742	13150	-16742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCACAGTGCTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	93695776	93701590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93695877_93695974_93696047_93701491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000853	chr1	+	260	2	ISM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	23394	9699	23394	-9699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTTTTTCATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	93706020	93708633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93706087_93708439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000854	chr1	+	287	1	ISM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	35419	0	35419	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTTCTTGAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	93718045	93718332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_93718000_93718300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000855	chr1	-	271	1	Genic_Genomic	ENSMUSG00000026281.16	novel	NA	NA	NA	NA	6156	1	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGGTTCTGCCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	93720567	93720296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_93720300_93720600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000856	chr1	-	1037	3	FSM	ENSMUSG00000026281.16	ENSMUST00000112893.2	1040	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCTCTCATAACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	93726720	93720445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_93720666_93722447_93722646_93726101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000857	chr1	-	303	3	ISM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	1023	2246	995	-2098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGGCCTTGAGCGATA	NA	NA	NA	NA	NA	NA	NA	NA	93728633	93722543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_93722646_93726101_93726193_93728523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000858	chr1	-	433	3	ISM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	4	5804	4	1685	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTGTGTAGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	93729652	93726101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_93726193_93728523_93728633_93729419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000859	chr1	-	1062	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTTTTGTTTTATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	93729628	93727779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_93728633_93729419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000860	chr1	+	1751	1	Genic_Genomic	ENSMUSG00000026283.14	novel	NA	NA	NA	NA	16006	6	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAAAGTAGATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	93748072	93749823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_93748100_93749800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000861	chr1	+	2118	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	0	-6	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTCTAGTTGCCACATTC	NA	NA	NA	NA	NA	NA	NA	NA	95241347	95263015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_95241976_95252833_95252969_95261660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000862	chr1	+	487	1	FSM	ENSMUSG00000081051.5	ENSMUST00000117288.2	531	1	106	-62	106	62	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAACCAAGACATTAG	NA	NA	NA	NA	NA	NA	NA	NA	95426451	95426938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_95426500_95426900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000863	chr1	-	332	3	FSM	ENSMUSG00000026331.14	ENST00000389019.7	322	3	-9	-1	-9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTTTTTCTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	97009084	97000572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_97000708_97003553_97003708_97009041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000864	chr1	-	312	3	ISM	ENSMUSG00000026331.14	ENSMUST00000189547.2	2315	14	46957	13335	6	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACTGTTTTTTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	97009069	97000573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_97000708_97003553_97003708_97009045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000865	chr1	-	961	1	ISM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	17214	37582	16108	3	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCGTGGTGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	97572585	97571624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_97571600_97572600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000866	chr1	-	1072	3	FSM	ENSMUSG00000044768.17	ENST00000510890.1	2622	3	14	1536	14	-1536	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTGCAGTAATTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	97588679	97573165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_97574087_97582324_97582415_97588618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000867	chr1	+	307	2	ISM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	7204	9880	7179	4950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTCACAAAATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	97705100	97710814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_97705245_97710651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000868	chr1	-	879	1	ISM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	273649	0	155283	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCAGAGTGTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97749697	97748818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_97748800_97749700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000869	chr1	-	456	1	FSM	ENSMUSG00000089782.2	ENSMUST00000162698.2	489	1	299	-266	299	266	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATGAGACAAAGATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	97876815	97876359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_97876400_97876800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000870	chr1	+	1057	5	NNC	ENSMUSG00000100009.7	novel	1049	5	NA	NA	1	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTAGTCCTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	98517243	98535115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_98517383_98524972_98525119_98532855_98532913_98533442_98533710_98534667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000871	chr1	+	642	1	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCAGGAGATGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	99117454	99118096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr1_+_99117500_99118100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000872	chr1	+	295	1	FSM	ENSMUSG00000100222.2	ENSMUST00000187074.2	705	1	517	-107	517	107	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTCTACTCAAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	101314127	101314422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_101314100_101314400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000873	chr1	+	2672	1	FSM	ENSMUSG00000102325.2	ENSMUST00000192862.2	2889	1	222	-5	222	5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAATCATTTCTCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	103652291	103654963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_103652300_103655000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000874	chr1	+	664	1	Genic_Genomic	ENSMUSG00000067017.6	novel	NA	NA	NA	NA	2199	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATGCCACACTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	105385894	105386558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_105385900_105386600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000875	chr1	+	523	1	ISM	ENSMUSG00000026319.14	ENSMUST00000086721.10	5414	29	90680	76	90670	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTTGCTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	105682317	105682840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_105682300_105682800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000876	chr1	-	135	1	ISM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	39134	0	39059	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAATTGCAAGCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	106648323	106648188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_106648200_106648300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000877	chr1	-	688	6	ISM	ENSMUSG00000009905.6	ENST00000326575.9	937	9	11813	-4	11813	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTGTAAGCAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	106675569	106652498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106675217_106675314_106675500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000878	chr1	-	361	1	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	26938	0	26877	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTATGTTTTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	106697520	106697159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_106697200_106697500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000879	chr1	-	659	3	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	19256	2804	19195	-2804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGGTATGAGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	106705202	106699963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_106700279_106701736_106701878_106704999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000880	chr1	-	353	3	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	16624	7932	16563	-7932	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCTATTCAGGAGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	106707834	106705091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_106705220_106706698_106706781_106707691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000881	chr1	-	357	3	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	13971	10573	13910	-10573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACGGAGAATTAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	106710487	106707732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_106707841_106708233_106708391_106710395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000882	chr1	-	417	2	ISM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	3	22248	3	-22248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCATGTTCTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	106724455	106719407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_106719520_106724150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000883	chr1	+	1220	6	FSM	ENSMUSG00000067001.12	ENST00000540675.5	1280	6	61	-1	61	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTACTTCCCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107356038	107379926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_107356147_107363056_107363174_107373721_107373844_107375842_107375981_107377905_107378053_107379338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000884	chr1	+	815	3	NNC	ENSMUSG00000067001.12	novel	1280	6	NA	NA	19917	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTACTTCCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	107375894	107379925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_107375981_107377905_107378048_107379338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000885	chr1	-	1062	2	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATTGCCCAGGCGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108343459	108337380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr1_-_108338138_108343154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000886	chr1	-	877	1	Genic_Genomic	ENSMUSG00000026374.15	novel	NA	NA	NA	NA	15764	2	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGTGCAAACGCACA	NA	NA	NA	NA	NA	NA	NA	NA	118223382	118222505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_118222500_118223400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000887	chr1	-	1051	3	ISM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	6098	5408	6098	-5408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGATGTCTTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	118233048	118227915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_118228768_118232420_118232501_118232929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000888	chr1	+	1176	5	ISM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	5785	411	5770	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGTATTCAAGATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	118255353	118261141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000889	chr1	+	690	1	Genic_Genomic	ENSMUSG00000026377.13	novel	NA	NA	NA	NA	11283	4	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGACTTTTTTTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	118260866	118261556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_118260900_118261600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000890	chr1	+	873	4	ISM	ENSMUSG00000064302.14	ENSMUST00000191823.6	3916	33	108398	-206	108398	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTATGTTCTTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	118518166	118535073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_118518280_118528107_118528315_118530094_118530212_118534637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000891	chr1	-	464	1	ISM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	217372	1652	31939	2	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGCTCCTGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	118763977	118763513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_118763500_118764000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000892	chr1	-	1069	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	25987	1944	25987	-1944	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGGCCTTGCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	118769929	118765459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_118765908_118767983_118768321_118769645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000893	chr1	-	584	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	22133	6130	22133	-6130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACAGAGCTGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	118773783	118769645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_118769928_118772080_118772246_118773646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000894	chr1	-	487	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	19617	8580	19617	-8580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACTCCAATGAGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	118776299	118772095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_118772246_118773646_118773797_118776112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000895	chr1	-	447	3	NNC	ENSMUSG00000048402.15	novel	4447	11	NA	NA	19637	-8594	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACCAGAACCGCACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	118776279	118772109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_118772246_118773646_118773797_118776118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000896	chr1	-	722	4	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	12548	12603	12548	-12603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTAAGCTCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	118783368	118776118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_118776298_118780987_118781111_118782170_118782388_118783165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000897	chr1	-	476	3	ISM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	120	19650	120	-19650	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCCCCAATAGTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	118795796	118783165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_118783368_118794301_118794488_118795708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000898	chr1	-	3330	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	37	888	37	-888	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTGGCAGAGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	119349941	119344082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_119345828_119348356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000899	chr1	-	309	1	Genic_Genomic	ENSMUSG00000004451.15	novel	NA	NA	NA	NA	34182	1	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCCCTTTTTCCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	119398342	119398033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_119398000_119398300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000900	chr1	-	643	3	ISM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	26669	1267	26669	-1267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGTGGCTGGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	119405855	119399301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_119399556_119403624_119403803_119405644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000901	chr1	-	417	3	ISM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	21135	5726	21135	-5726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGGTCGTGGGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	119411389	119403760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_119403803_119405644_119405854_119411223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000902	chr1	-	470	3	ISM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	3	7727	3	-7727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGGCCAGGAGGACTATG	NA	NA	NA	NA	NA	NA	NA	NA	119432521	119405761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_119405854_119411223_119411387_119432306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000903	chr1	+	1362	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	1462	0	1462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACCCTCAGCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	119455351	119456713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_119455400_119456700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000904	chr1	-	1197	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	49	2095	49	-2095	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATAGGCACTGCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	119840889	119837714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_119838885_119840862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000905	chr1	-	1312	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCTATGACTCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	120001803	119995104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_119996055_120001441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000906	chr1	+	1189	2	Antisense	novelGene_ENSMUSG00000050777.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGAGGACTGGGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	119995105	120001682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_+_119996049_120001436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000907	chr1	-	574	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGTCTGGGTGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	120048811	120041007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000908	chr1	-	471	3	FSM	ENSMUSG00000026385.17	ENSMUST00000112648.8	504	3	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAGTTTTTACCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	120047835	120041066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_120041264_120044115_120044179_120047624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000909	chr1	-	3334	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	5	-587	5	587	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCACACTGGAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	120193009	120153565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000910	chr1	-	885	1	ISM	ENSMUSG00000026389.17	ENSMUST00000112641.8	5158	6	43549	2263	37751	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCCTTTTCATTTACC	NA	NA	NA	NA	NA	NA	NA	NA	120155263	120154378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_120154400_120155300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000911	chr1	+	2551	2	FSM	ENSMUSG00000058665.9	ENSMUST00000079721.9	2624	2	73	0	73	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCCCTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	120530219	120535721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_120531651_120534601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000912	chr1	-	2089	5	ISM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	8326	0	7980	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	121247427	121232081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000913	chr1	+	1052	1	ISM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	74360	0	74299	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCATTTAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	121433137	121434189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_121433100_121434200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000914	chr1	-	1800	6	ISM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	29566	-1	29395	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGGTTTTTCTTCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	125333718	125320641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000915	chr1	-	1193	1	NIC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	41278	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	125321835	125320642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_125320600_125321800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000916	chr1	-	490	5	FSM	ENSMUSG00000026341.17	ENST00000415792.5	500	5	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACACACACTGACTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	125363102	125333576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_125333726_125335028_125335137_125336256_125336353_125345985_125346042_125363021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000917	chr1	+	959	3	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	28793	203	28793	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGTGATAAAGAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	125517545	125523354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_125517703_125518769_125518867_125522649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000918	chr1	+	762	1	ISM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	34043	0	34043	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTAAGCGATGACAT	NA	NA	NA	NA	NA	NA	NA	NA	125522795	125523557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_125522800_125523600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000919	chr1	+	2676	2	FSM	ENSMUSG00000026343.7	ENSMUST00000027581.7	2691	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCCCTCACCACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125604746	125801599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_125605930_125800106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000920	chr1	+	2476	4	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	25261	1355	25261	-1354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGAGAGAGAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	127727204	127732315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_127727291_127729342_127729414_127729898_127731031_127731128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000921	chr1	+	3524	3	ISM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	28060	0	28060	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	NA	NA	NA	NA	NA	NA	NA	127730003	127733670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_127731031_127731128_127732316_127732360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000922	chr1	+	2293	3	NNC	ENSMUSG00000026349.15	novel	4424	11	NA	NA	28837	-451	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCTTGGTGATTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	127730780	127733218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_127731031_127731128_127732314_127732360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000923	chr1	+	715	1	ISM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	31055	2128	31012	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGTGTGAACTATTC	NA	NA	NA	NA	NA	NA	NA	NA	127732955	127733670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_127733000_127733700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000924	chr1	-	786	3	FSM	ENSMUSG00000051590.11	ENST00000392918.7	786	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTTAAACCCCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	127748273	127742992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_127743075_127744971_127745558_127748155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000925	chr1	+	1329	4	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	25739	1499	25739	-1499	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAAAGTCCAGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	128197637	128205616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_128197709_128200557_128200690_128202538_128202742_128204693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000926	chr1	+	933	1	ISM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	34284	0	34284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCATTTTGCTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	128206182	128207115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_128206200_128207100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000927	chr1	-	402	1	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	53251	0	53251	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	128291845	128291443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128291400_128291800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000928	chr1	-	642	5	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	47822	287	47822	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTAAGAAAAATTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	128297274	128291730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000929	chr1	-	351	5	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	45178	2990	45178	-2990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTGCTATTGCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	128299918	128294433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000930	chr1	-	422	4	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	43272	4658	43272	-4658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATTTGACCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	128301824	128296101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128296183_128297229_128297273_128299876_128300024_128301673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000931	chr1	-	438	3	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	41040	8432	41040	-8432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTCTGATATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	128304056	128299875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128300024_128301673_128301822_128303914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000932	chr1	-	460	4	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	30181	10227	30181	-10227	internal_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTATTTAATATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	128314915	128301670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128301822_128303914_128304050_128306502_128306615_128314853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000933	chr1	-	364	4	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	28163	12492	28163	-12492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTCTGCATTGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	128316933	128303935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128304050_128306502_128306615_128314853_128314914_128316855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000934	chr1	-	461	5	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	11889	15059	11889	-15059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTTCTTAATGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	128333207	128306502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000935	chr1	-	371	4	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	3604	25424	3604	22987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAGAAGAGGTAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	128341492	128316867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128316937_128319007_128319111_128333102_128333206_128341396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000936	chr1	-	353	4	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	1953	27563	1953	20848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCATTTTGTAGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	128343143	128319006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128319111_128333102_128333206_128341396_128341490_128343090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000937	chr1	-	398	4	ISM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	1	41722	1	6689	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCAGGCTCTTGTGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	128345095	128333165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_128333206_128341396_128341490_128343090_128343149_128344888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000938	chr1	+	1269	4	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	5	551421	5	-382498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCAGCCTCTCAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129523108	129595591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_129523918_129540846_129541096_129556613_129556784_129595550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000939	chr1	+	1203	4	ISM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	597206	319	597206	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGCATTGATCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	130120309	130146693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_130120374_130122843_130123037_130137977_130138066_130145835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000940	chr1	+	882	4	NNC	ENSMUSG00000042581.15	novel	5788	26	NA	NA	597243	-599	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTCATGAACACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	130120346	130146413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_130120374_130122847_130123037_130137977_130138066_130145835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000941	chr1	+	906	1	Genic_Genomic	ENSMUSG00000042581.15	novel	NA	NA	NA	NA	623007	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTGGTTTATACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	130146110	130147016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_130146100_130147000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000942	chr1	-	689	5	FSM	ENSMUSG00000100257.2	ENST00000243611.9	690	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATTTTACTGAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	130611802	130598010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_130598139_130598683_130598811_130609885_130609977_130610538_130610716_130611636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000943	chr1	+	3694	2	FSM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	412	2022	412	-2022	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGCTACCACATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	130645475	130650073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_130645549_130646452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000944	chr1	+	3676	1	ISM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	3356	0	3356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGCGAGCATATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	130648419	130652095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_130648400_130652100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000945	chr1	+	2303	1	NIC	ENSMUSG00000042510.8	novel	2909	4	NA	NA	10344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCCCTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	130670056	130672359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_130670100_130672400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000946	chr1	-	1324	2	ISM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	41986	294	41986	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACCTTACCCTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	130983577	130981730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_130982973_130983495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000947	chr1	-	1301	1	ISM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	9585	0	9585	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCATGCATCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	131056492	131055191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131055200_131056500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000948	chr1	-	2094	1	ISM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	238761	1242	236418	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCTGTACGTCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	131216324	131214230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131214200_131216300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000949	chr1	-	2333	2	ISM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	232751	1240	232159	-1240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGATGCCTCTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	131220583	131215470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131217479_131220258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000950	chr1	-	1327	2	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	181048	0	180456	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATGAGGCATGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	131272286	131270790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131271318_131271486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000951	chr1	-	340	1	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	182203	1	181611	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATATGAGGCATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	131271131	131270791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131270800_131271100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000952	chr1	+	368	1	Antisense	novelGene_ENSMUSG00000026425.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTAGGCGTGGTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	131270949	131271317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_+_131270900_131271300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000953	chr1	-	627	3	ISM	ENSMUSG00000026425.16	ENST00000605551.2	1007	7	175327	-94	175327	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCACAAGATTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	131277415	131271985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131272285_131273499_131273602_131277189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000954	chr1	-	386	3	ISM	ENSMUSG00000026425.16	ENST00000605551.2	1007	7	169385	1470	169385	-1470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACAGCTGCAGTCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	131283357	131273549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131273602_131277189_131277415_131283248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000955	chr1	-	577	3	ISM	ENSMUSG00000026425.16	ENST00000605551.2	1007	7	168093	5109	168093	-5109	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCATTCCCTATATTG	NA	NA	NA	NA	NA	NA	NA	NA	131284649	131277188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131277415_131283248_131283378_131284427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000956	chr1	-	388	3	ISM	ENSMUSG00000026425.16	ENST00000605551.2	1007	7	160947	11182	160947	-11182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTATTGATGTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	131291795	131283261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131283378_131284427_131284644_131291739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000957	chr1	-	359	3	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	113634	13720	113042	-12431	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCCACAGCCAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	131339700	131284510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131284644_131291739_131291803_131339537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000958	chr1	-	2090	1	FSM	ENSMUSG00000104060.2	ENSMUST00000195400.2	2071	1	-1	-18	-1	18	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCCACAAAAACAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	131306270	131304180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_131304200_131306300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000959	chr1	-	670	3	ISM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	315	68777	83	-67488	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGGACTCAGGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	131453019	131339567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_131339701_131364412_131364606_131452675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000960	chr1	+	683	3	FSM	ENSMUSG00000055184.5	ENST00000619376.4	707	3	30	-6	30	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCGGTGGTTTAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	131456164	131466751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_131456591_131458391_131458470_131466572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000961	chr1	+	887	5	FSM	ENSMUSG00000052688.13	ENSMUST00000064664.10	1672	5	64	721	5	200	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTCAGGGAGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	131616508	131639768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_131616574_131624736_131624805_131625566_131625694_131626153_131626370_131639357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000962	chr1	+	1901	4	ISM	ENSMUSG00000052688.13	ENSMUST00000064679.9	4498	6	9161	2361	9090	327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTAATAACTGGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	131625593	131640816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_131625694_131626153_131626370_131633333_131633460_131639357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000963	chr1	+	870	1	ISM	ENSMUSG00000052688.13	ENSMUST00000064679.9	4498	6	23211	2664	23140	24	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTTGATTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	131639643	131640513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_131639600_131640500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000964	chr1	+	1498	1	Genic_Genomic	ENSMUSG00000052688.13	novel	NA	NA	NA	NA	25178	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAAACCTCATCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	131641681	131643179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_131641700_131643200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000965	chr1	+	1321	1	ISM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	19568	0	19568	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTATCCCTGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	131775282	131776603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_131775300_131776600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000966	chr1	+	1274	2	ISM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	19201	400	19179	-400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTTCTTCACAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	131857472	131860017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_131857501_131858771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000967	chr1	+	1247	1	ISM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	20899	0	20877	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACATTCAGGTCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	131859170	131860417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_131859200_131860400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000968	chr1	+	1070	1	ISM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	24696	0	24696	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	131862989	131864059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_131863000_131864100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000969	chr1	-	711	1	ISM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	26737	0	26658	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGAAGTGACTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	132040685	132039974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_132040000_132040700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000970	chr1	+	310	2	ISM	ENSMUSG00000042115.5	ENSMUST00000046071.5	4269	5	3971	4201	3971	-4201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGGTCCCCATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	132230334	132230894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_132230428_132230677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000971	chr1	+	330	2	ISM	ENSMUSG00000042115.5	ENSMUST00000046071.5	4269	5	5137	2497	5137	-2497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTTGGACTACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	132231500	132232598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_132231569_132232336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000972	chr1	+	253	1	ISM	ENSMUSG00000042115.5	ENSMUST00000046071.5	4269	5	8479	0	8479	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGAGTCTAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	132234842	132235095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_132234800_132235100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000973	chr1	+	1143	2	ISM	ENSMUSG00000009772.16	ENSMUST00000072177.14	2936	8	14465	931	14465	-931	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCAAAGCTCAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	132258328	132260100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_132258430_132259058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000974	chr1	+	1138	1	Genic_Genomic	ENSMUSG00000009772.16	novel	NA	NA	NA	NA	16236	11	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCACCCTTCCAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	132260099	132261237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_132260100_132261200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000975	chr1	-	2650	4	FSM	ENSMUSG00000042066.17	ENST00000637895.1	1459	4	0	-1191	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGAGGTCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	132304475	132284052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132304405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000976	chr1	-	725	1	ISM	ENSMUSG00000026442.15	ENSMUST00000094569.11	9739	30	173068	3275	96898	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAGCGGTCACAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	132496427	132495702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_132495700_132496400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000977	chr1	-	363	1	ISM	ENSMUSG00000026442.15	ENSMUST00000094569.11	9739	30	171370	5335	95200	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTCATTGTCTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	132498125	132497762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_132497800_132498100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000978	chr1	-	419	3	ISM	ENSMUSG00000026442.15	ENST00000513543.6	4106	26	55111	38380	55109	-8570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTACCTCACTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	132538216	132536142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_132536246_132537494_132537643_132538048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000979	chr1	-	573	1	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	26627	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCAGTCACAGAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	132919965	132919392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_132919400_132920000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000980	chr1	-	832	4	ISM	ENSMUSG00000054387.14	ENST00000612738.4	954	5	6483	0	-29	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTCAGTCACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	132946621	132919394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_132919964_132922240_132922322_132940374_132940450_132946514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000981	chr1	-	447	5	FSM	ENSMUSG00000054387.14	ENST00000507825.3	445	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGGATCAAGACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	132946592	132931524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000982	chr1	+	1667	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	1174	2753	1174	-2753	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAAACACCAACTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	133060054	133064768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_133061354_133064400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000983	chr1	+	1624	1	ISM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	7017	0	7017	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGACTTTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	133065897	133067521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133065900_133067500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000984	chr1	-	1201	2	FSM	ENSMUSG00000101693.2	ENST00000654944.1	1197	2	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGTTAAATCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	133184768	133183106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_133184205_133184665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000985	chr1	-	1102	1	NIC	ENSMUSG00000101693.2	novel	2566	4	NA	NA	560	4	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGTTAAATCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	133184208	133183106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_133183100_133184200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000986	chr1	+	1158	2	Antisense	novelGene_ENSMUSG00000101693.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAAAAGATGTTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	133183110	133184734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_+_133184207_133184672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000987	chr1	+	125	2	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	28	37810	28	-37382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCGCACACTCCATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	133187807	133191572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133187895_133191534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000988	chr1	+	804	4	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	4615	28953	4615	-28525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGGCCTAGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	133192394	133200429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133192472_133194303_133194405_133197797_133197941_133199946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000989	chr1	+	1146	3	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	10016	27269	10016	-26841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCACCACTCCACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	133197795	133202113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133197941_133199946_133200430_133201595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000990	chr1	+	917	5	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	12448	22215	12448	-21787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGCCCACCTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	133200227	133207167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133200430_133201595_133202113_133202530_133202618_133203549_133203604_133207110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000991	chr1	+	109	2	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	20338	19781	20338	-19353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGCGGCTGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	133208117	133209601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133208146_133209520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000992	chr1	+	786	6	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	24868	9114	24868	-8686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCCTCGCAGCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	133212647	133220268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215623_133220095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000993	chr1	+	120	2	ISM	ENSMUSG00000041757.18	ENSMUST00000186917.7	4820	22	26358	13647	25325	-13647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAGAAGCAGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	133213104	133215307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133213125_133215207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000994	chr1	+	158	2	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	32408	7860	32408	-7432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATATGAGACACCACGG	NA	NA	NA	NA	NA	NA	NA	NA	133220187	133221522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133220267_133221443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000995	chr1	+	1159	4	ISM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	33910	1183	33910	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGGGATGTAAAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	133221689	133228199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133221826_133222300_133222447_133226657_133226782_133227446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000996	chr1	+	828	1	ISM	ENSMUSG00000041757.18	ENST00000272203.8	6348	24	119453	1786	40776	1	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCATGTCATAGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	133228555	133229383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_133228600_133229400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000997	chr1	-	215	1	Genic_Genomic	ENSMUSG00000090553.9	novel	NA	NA	NA	NA	6134	4	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATTCTGGTGGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	133531819	133531604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_133531600_133531800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000998	chr1	-	498	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCATTCTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	133538024	133531608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000000999	chr1	+	283	2	Antisense	novelGene_ENSMUSG00000090553.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGGAAGGCAAATGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	133531608	133534317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_+_133531817_133534242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001000	chr1	-	262	2	ISM	ENSMUSG00000090553.9	ENSMUST00000166291.8	360	4	1275	0	1258	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGTTTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	133536695	133531613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133531815_133536634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001001	chr1	-	285	3	NNC	ENSMUSG00000090553.9	novel	669	4	NA	NA	1	-412	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGATAGTTGGCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	133538028	133534236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_133534318_133536634_133536698_133537887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001002	chr1	-	1649	1	ISM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	39808	0	39808	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTATCATTATAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	133549248	133547599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133547600_133549200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001003	chr1	-	1768	3	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	38224	273	38224	-273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTCTGCACATGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	133550832	133547950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133549540_133549854_133549923_133550721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001004	chr1	-	396	2	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	36608	3043	36608	-3043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGATGAGCACCGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	133552448	133550720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133550889_133552220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001005	chr1	-	284	2	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	34327	5932	34327	-5932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTAAGATGGAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	133554729	133553609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133553669_133554504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001006	chr1	-	281	2	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	22075	18933	22075	-18933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTCTGCCCGCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	133566981	133566610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133566688_133566777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001007	chr1	-	287	2	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	20583	19141	20583	-19141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTAATCAACGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	133568473	133566818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133566982_133568349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001008	chr1	-	311	2	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	13792	25787	13792	-25787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTCCAATATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	133575264	133573464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133573585_133575073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001009	chr1	-	1596	2	ISM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	5945	27395	5945	-27395	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGGCATCACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	133583111	133575072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133575268_133581710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001010	chr1	-	764	1	ISM	ENSMUSG00000041577.6	ENSMUST00000048432.6	3615	3	10347	0	10347	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTGTGTGAATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	133838805	133838041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133838000_133838800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001011	chr1	-	945	2	ISM	ENSMUSG00000041577.6	ENSMUST00000048432.6	3615	3	6537	1966	6537	-1966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTAGCCGAGTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	133842615	133840007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_133840520_133842182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001012	chr1	-	2479	1	Genic_Genomic	ENSMUSG00000020423.7	novel	NA	NA	NA	NA	1473	1	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCTCCTTGGGAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	134005385	134002906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_134002900_134005400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001013	chr1	-	2646	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	0	97	0	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCGTGGACTTCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	134006858	134003004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_134005442_134006649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001014	chr1	+	1502	3	FSM	ENSMUSG00000026459.6	ENSMUST00000027730.6	1495	3	-5	-2	-5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTGCAATGATATTATC	NA	NA	NA	NA	NA	NA	NA	NA	134217721	134220288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_134218265_134218830_134218913_134219411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001015	chr1	-	458	1	ISM	ENSMUSG00000026458.14	ENSMUST00000168515.8	6067	29	34111	1577	20613	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTCTGGACCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	134226555	134226097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134226100_134226600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001016	chr1	-	565	2	ISM	ENSMUSG00000026458.14	ENST00000599966.5	2396	15	19962	81	19962	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGCCCAGGATCCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	134227206	134226179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134226567_134227028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001017	chr1	-	167	2	ISM	ENSMUSG00000026458.14	ENST00000599966.5	2396	15	15729	2108	15729	-2108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACCTGGATATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	134231439	134228206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134228277_134231342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001018	chr1	-	425	3	ISM	ENSMUSG00000026458.14	ENST00000599966.5	2396	15	6709	11215	6709	-11215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCAGGCTGGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	134240459	134237313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134237490_134239794_134239858_134240273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001019	chr1	-	601	1	Genic_Genomic	ENSMUSG00000042305.13	novel	NA	NA	NA	NA	15174	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTCAACTTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	134274434	134273833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_134273800_134274400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001020	chr1	-	735	2	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	11630	-395	11630	395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGTTGCTGCTCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	134277978	134275355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134275933_134277820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001021	chr1	-	416	3	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	9435	-1	9435	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTCCTGCTTCCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	134280173	134275749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134275933_134277820_134277969_134280088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001022	chr1	-	437	4	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	6256	2102	6256	-2102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATTGTCATGGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	134283352	134277852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134277969_134280088_134280174_134282398_134282580_134283297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001023	chr1	-	415	3	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	944	6741	944	-6741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGTATCATATGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	134288664	134282491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134282580_134283297_134283455_134288494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001024	chr1	-	417	3	ISM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	246	7546	246	-7546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGACCTCTGAGTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	134289362	134283296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_134283455_134288494_134288663_134289271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001025	chr1	+	1229	5	ISM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	1798	0	1798	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	134335316	134339478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001026	chr1	+	2915	7	ISM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	7465	-3	7465	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	134350658	134361089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001027	chr1	+	1144	1	ISM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	16830	0	16752	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	134359945	134361089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_134359900_134361100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001028	chr1	+	833	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	21	2007	21	-2007	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAATCCTAGTTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	134422406	134434505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_134422548_134433813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001029	chr1	+	765	1	ISM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	13362	0	13362	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGCGAGATGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	134435747	134436512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_134435700_134436500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001030	chr1	+	467	1	FSM	ENSMUSG00000096712.2	ENSMUST00000179718.2	483	1	19	-3	19	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCTGCCAGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	134445837	134446304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_134445800_134446300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001031	chr1	+	835	2	ISM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	70356	233	70339	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCCCCTTTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	134558268	134559586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_134558492_134558974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001032	chr1	+	755	1	ISM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	71158	439	71135	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTACTCAGTCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	134559064	134559819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_134559100_134559800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001033	chr1	+	661	4	ISM	ENSMUSG00000026429.10	ENST00000646651.1	657	6	2000	-2	2000	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	134898978	134901900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_134899094_134899638_134899738_134899843_134899928_134901537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001034	chr1	+	473	4	ISM	ENSMUSG00000026429.10	ENST00000646651.1	657	6	2670	-2	2670	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	134899648	134901900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_134899738_134899843_134899928_134901537_134901764_134901826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001035	chr1	+	810	1	FSM	ENSMUSG00000079139.5	ENSMUST00000110798.5	1231	1	610	-189	610	189	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTCTTATTACCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	135160342	135161152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_135160300_135161200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001036	chr1	-	329	1	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	21044	0	21044	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	135190778	135190449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135190400_135190800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001037	chr1	-	785	3	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	18678	0	18678	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	135193144	135190449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135190868_135191790_135191934_135192920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001038	chr1	-	350	2	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	12322	5369	12322	-5369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAAGGCTCCTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	135199500	135195818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135195935_135199266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001039	chr1	-	717	3	ISM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	14	14759	14	-14759	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGATGAGCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	135211808	135205208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135205276_135206504_135206646_135211299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001040	chr1	-	162	1	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	18404	0	18404	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGGCCATGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	135223112	135222950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135223000_135223100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001041	chr1	-	155	2	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	9285	6700	9285	-6700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCCCAGGATTCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	135232231	135229650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135229742_135232167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001042	chr1	-	206	2	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	7585	9227	7585	-9227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGGTAAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	135233931	135232177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135232279_135233826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001043	chr1	-	151	2	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	4579	10919	4579	-10919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTAGCGGTGCCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	135236937	135233869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135233956_135236872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001044	chr1	-	166	2	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	3909	13919	3909	-13919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGATGTCTCCATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	135237607	135236869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135236937_135237508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001045	chr1	-	172	2	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	11	14560	11	-14560	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGTGAGTGATTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	135241505	135237510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135237609_135241431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001046	chr1	-	1752	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGAGTCCGTCCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	135302964	135298794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001047	chr1	-	1243	1	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	46945	0	46945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTCAGTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	135311292	135310049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135310000_135311300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001048	chr1	-	1263	3	ISM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	44239	2022	44239	-2022	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTATTTTTCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	135313998	135312071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135313216_135313664_135313742_135313956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001049	chr1	-	151	1	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	146856	3769	146856	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGGGACCTGATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	135366237	135366086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135366100_135366200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001050	chr1	-	204	2	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	141659	7059	141659	-2791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCATTAGCTCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	135371434	135369376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135369518_135371371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001051	chr1	-	204	2	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	136353	9120	136353	-4852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACCCCCGGAGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	135376740	135371437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135371570_135376668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001052	chr1	-	195	2	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	130073	20258	130073	-15990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAGCCAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135383020	135382575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135382622_135382871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001053	chr1	-	190	2	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	124903	24117	124903	-19849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGATGCTGATGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	135388190	135386434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135386516_135388081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001054	chr1	-	215	2	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	52887	38197	52887	-33929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAACCACTCCCACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	135460206	135400514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135400610_135460086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001055	chr1	-	192	2	ISM	ENSMUSG00000009418.17	ENSMUST00000040599.15	12767	30	704	102625	704	-98357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACAGGTGAGCTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	135512389	135464942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135465038_135512292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001056	chr1	-	214	2	ISM	ENSMUSG00000009418.17	ENST00000367302.5	9579	30	5194	146872	5194	-146373	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAAGGCAGCCGCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	135530361	135512958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_135513094_135530282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001057	chr1	+	1134	4	ISM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	16112	448	16112	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGCAAGGGAGATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	135672996	135679522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135673166_135674457_135674588_135678302_135678397_135678781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001058	chr1	+	918	1	Genic_Genomic	ENSMUSG00000026421.15	novel	NA	NA	NA	NA	22169	1	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTCCTGTCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	135679053	135679971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_135679100_135680000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001059	chr1	+	1437	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTACTGAGTGAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	135693855	135696875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_135694633_135696215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001060	chr1	+	1184	2	NNC	ENSMUSG00000041801.6	novel	1435	2	NA	NA	246	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTACTGAGTGAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	135694102	135696874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_135694628_135696215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001061	chr1	+	963	7	NIC	ENSMUSG00000026418.17	novel	1038	9	NA	NA	2759	3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTGTAGCCCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	135730329	135738730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001062	chr1	+	185	3	NNC	ENSMUSG00000026414.14	novel	1064	14	NA	NA	1	-5505	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGATGCTGGCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	135768595	135773671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_135768655_135773292_135773383_135773635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001063	chr1	+	162	3	ISM	ENSMUSG00000026414.14	ENSMUST00000178854.8	1076	15	4678	5505	-2163	-4683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAATGCACCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	135773290	135774493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135773383_135773635_135773672_135774459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001064	chr1	+	219	3	ISM	ENSMUSG00000026414.14	ENSMUST00000178854.8	1076	15	5844	4162	-997	-3340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCACTCTGTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	135774456	135775836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135774494_135775446_135775511_135775718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001065	chr1	+	255	3	ISM	ENSMUSG00000026414.14	ENST00000438742.6	564	6	-2	2549	-2	-2549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACCCTAGCCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	135775451	135776627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135775511_135775718_135775836_135776548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001066	chr1	+	305	3	ISM	ENSMUSG00000026414.14	ENST00000438742.6	564	6	266	1978	266	-1978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGCAAAGCAGCATCG	NA	NA	NA	NA	NA	NA	NA	NA	135775719	135777198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135775836_135776548_135776627_135777087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001067	chr1	+	303	3	ISM	ENSMUSG00000026414.14	ENST00000438742.6	564	6	1095	618	1095	-618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGACAGTTGGTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	135776548	135778558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135776627_135777087_135777203_135778448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001068	chr1	+	190	2	ISM	ENSMUSG00000026414.14	ENSMUST00000179863.8	1097	15	8475	1471	1634	-649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCGACCACCTGAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	135777087	135778527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135777199_135778448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001069	chr1	+	262	3	ISM	ENSMUSG00000026414.14	ENST00000438742.6	564	6	1690	-6	1690	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCTCACTGTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	135777143	135779182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135777203_135778448_135778559_135779089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001070	chr1	+	220	3	ISM	ENSMUSG00000026414.14	ENSMUST00000178854.8	1076	15	9858	524	3017	298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTCTGGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	135778470	135779474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135778559_135779089_135779181_135779433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001071	chr1	+	321	3	ISM	ENSMUSG00000026414.14	ENSMUST00000178854.8	1076	15	10475	47	3634	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTATGCCCGCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	135779087	135779951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_135779181_135779433_135779475_135779764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001072	chr1	+	239	1	Genic_Genomic	ENSMUSG00000026414.14	novel	NA	NA	NA	NA	4311	5	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATAGTGTTTCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	135779764	135780003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_135779800_135780000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001073	chr1	+	1793	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	14	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTAAGCAAAACCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	135945718	135963081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001074	chr1	+	1283	1	NIC	ENSMUSG00000026411.18	novel	1806	6	NA	NA	15544	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTAAGCAAAACCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	135961797	135963080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_135961800_135963100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001075	chr1	+	568	2	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	14	28864	14	-28864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCACTGCTACCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	136059155	136072559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136059501_136072336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001076	chr1	+	458	3	ISM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	2900	26216	2900	-25308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGCAAACTGAGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	136075233	136076115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136075386_136075471_136075607_136075944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001077	chr1	+	831	3	ISM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	40753	-244	27561	244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGGGAGGTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	136099894	136101667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136100068_136100540_136100741_136101209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001078	chr1	+	909	2	ISM	ENSMUSG00000041642.19	ENST00000332129.6	7017	35	42902	175	29710	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGTCCTGAGCCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	136102043	136103996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136102509_136103552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001079	chr1	+	484	1	ISM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	44561	1565	31354	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGGTAGACAGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	136103687	136104171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136103700_136104200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001080	chr1	+	419	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	52	23259	52	-23259	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGAGCCTGTATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	136343060	136344637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136343162_136344319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001081	chr1	+	408	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	1870	20597	1870	-20597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGCAGCATGTTAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	136344878	136347299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136345135_136347147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001082	chr1	+	406	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	17041	6292	17041	-6292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	136360049	136361604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136360302_136361450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001083	chr1	+	498	2	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	19231	41	19231	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGATCTTTTTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	136362239	136367855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136362373_136367490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001084	chr1	+	384	1	ISM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	24504	0	24504	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTATTTATTTCAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	136367512	136367896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136367500_136367900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001085	chr1	+	2002	2	ISM	ENSMUSG00000041483.15	ENST00000367352.3	2921	3	263	872	263	-872	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACACTTTGTTTCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	136553005	136555115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_136553166_136553273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001086	chr1	-	731	1	ISM	ENSMUSG00000026398.15	ENSMUST00000027649.14	4733	9	115610	1537	104724	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAGTCAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	136772576	136771845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_136771800_136772600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001087	chr1	-	1595	4	ISM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	8511	751	8511	287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCCCCTCCCCATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	136868789	136772764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001088	chr1	-	776	2	ISM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	6132	96142	6132	-94955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAGGTATGTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	136871168	136868155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_136868788_136871024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001089	chr1	+	563	1	FSM	ENSMUSG00000102142.2	ENSMUST00000194874.2	1244	1	692	-11	692	11	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATTTAGCACACCAATA	NA	NA	NA	NA	NA	NA	NA	NA	137860470	137861033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_137860500_137861000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001090	chr1	+	439	3	FSM	ENSMUSG00000026394.6	ENST00000309309.11	436	3	-4	1	-4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCACACATCCAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	138201467	138215701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_138201586_138211360_138211505_138215524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001091	chr1	+	183	1	NIC	ENSMUSG00000026394.6	novel	1887	3	NA	NA	14047	3	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACATCCAAGTCCATAG	NA	NA	NA	NA	NA	NA	NA	NA	138215522	138215705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_138215500_138215700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001092	chr1	-	2467	1	ISM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	133171	1237	133096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGTATCTATCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	138414316	138411849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_138411800_138414300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001093	chr1	-	2479	2	ISM	ENSMUSG00000026393.11	ENSMUST00000187407.7	4336	10	121500	861	121033	-586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTGTTTATGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	138426379	138412435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_138414849_138426313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001094	chr1	-	324	2	FSM	ENSMUSG00000019230.15	ENST00000367388.4	323	2	7	-8	3	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCGGGCGCGGCGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	138770192	138769536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_138769665_138769996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001095	chr1	-	122	1	NIC	ENSMUSG00000019230.15	novel	4937	5	NA	NA	501	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGACCAGTCCGGGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	138769666	138769544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_138769500_138769700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001096	chr1	-	569	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACAAGATGCACGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	138784590	138779716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_138779912_138781308_138781411_138784318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001097	chr1	+	467	2	ISM	ENSMUSG00000056268.16	ENST00000620048.6	3038	22	202730	923	201179	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACACCAGGTCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	139096636	139097810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_139096787_139097493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001098	chr1	+	360	1	ISM	ENSMUSG00000056268.16	ENSMUST00000168527.8	8206	22	206927	5048	202916	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCCCTCAATGGTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	139098373	139098733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_139098400_139098700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001099	chr1	-	1376	4	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	99883	0	17977	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGCTGCTCTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	139165463	139126309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_139126526_139159401_139159529_139162464_139162594_139164559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001100	chr1	-	598	1	NIC	ENSMUSG00000063681.15	novel	5901	12	NA	NA	20919	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCCAGGGGAAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	139162521	139161923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_139161900_139162500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001101	chr1	-	1037	2	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	18422	92	18422	-92	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTAGTTAGAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	139165018	139162015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_139162594_139164559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001102	chr1	-	1460	3	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	12174	2800	12174	-2800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTACCACTGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	139171266	139164723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_139165467_139168860_139169027_139170715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001103	chr1	-	1619	3	ISM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	22924	44406	22924	4686	internal_fragment	TRUE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGTCATTCATGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	139242422	139170715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_139171264_139175856_139176814_139242308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001104	chr1	-	683	2	ISM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	11	14348	11	-870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAATCGCAGAAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	139183429	139176271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_139176814_139183288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001105	chr1	+	1639	2	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	20078	14964	20078	-14964	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTAGAGAGGCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	139404552	139406634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_139404641_139405083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001106	chr1	+	1621	2	ISM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	22295	11370	22295	-11370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCGAGAAGGAGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	139406769	139410228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_139408238_139410075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001107	chr1	-	491	3	FSM	ENSMUSG00000057037.9	ENST00000476712.6	490	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATATGTAAGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	139485364	139481259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_139481434_139484069_139484199_139485176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001108	chr1	-	650	1	ISM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	94868	8576	94614	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGTTTTGTCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	143483763	143483113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_143483100_143483800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001109	chr1	-	1014	4	ISM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	85199	573	85199	-573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTCAGTTGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	143493178	143483686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001110	chr1	+	576	2	ISM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	5432	-130	4672	130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTCCCCATGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	143620784	143622644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_143620962_143622245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001111	chr1	+	269	1	ISM	ENSMUSG00000018196.19	ENSMUST00000145969.8	924	4	7479	0	6133	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	143622245	143622514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_143622200_143622500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001112	chr1	+	501	1	ISM	ENSMUSG00000018196.19	ENSMUST00000129653.3	3515	4	8533	268	8533	7	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATCGTCAGAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	143624645	143625146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_143624600_143625100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001113	chr1	+	996	3	ISM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	22642	-2	22642	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTTACCTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	143675660	143683206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_143675773_143677872_143677972_143682421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001114	chr1	+	789	1	Genic_Genomic	ENSMUSG00000018189.13	novel	NA	NA	NA	NA	29401	4	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTACCTAATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	143682419	143683208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_143682400_143683200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001115	chr1	-	805	1	Genic_Genomic	ENSMUSG00000026360.10	novel	NA	NA	NA	NA	3891	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGTTTGATAATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	143875879	143875074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_143875100_143875900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001116	chr1	-	832	2	ISM	ENSMUSG00000026360.10	ENSMUST00000127206.8	3021	5	1907	1844	1778	701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCACGTATCACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	143877992	143876919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_143877613_143877853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001117	chr1	+	1117	3	ISM	ENSMUSG00000035131.15	ENSMUST00000166814.8	2760	8	254096	787	254096	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTACACATCTACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	146627520	146777423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_146627730_146707298_146707522_146776738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001118	chr1	+	774	1	Genic_Genomic	ENSMUSG00000035131.15	novel	NA	NA	NA	NA	404014	2	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGGGATTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	146777438	146778212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_146777400_146778200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001119	chr1	-	972	1	FSM	ENSMUSG00000099875.2	ENSMUST00000121422.2	465	1	160	-667	160	667	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTCTGATGACCAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	150141590	150140618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_150140600_150141600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001120	chr1	-	1036	1	ISM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	30740	0	30379	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGAATTTTAAAATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	150238091	150237055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_150237100_150238100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001121	chr1	+	801	1	FSM	ENSMUSG00000114943.2	ENSMUST00000224330.2	1679	1	888	-10	888	10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCATTCCTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	151069014	151069815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_151069000_151069800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001122	chr1	-	316	1	Genic_Genomic	ENSMUSG00000100954.5	novel	NA	NA	NA	NA	53	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCCTCAACCGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	151220434	151220118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_151220100_151220400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001123	chr1	+	1316	1	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	10966	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGTCTGTAGCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	151231234	151232550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_151231200_151232600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001124	chr1	+	1614	3	ISM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	16628	-7	16628	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGTGGGATTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	151236896	151240173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_151237026_151237212_151237387_151238862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001125	chr1	-	379	1	Genic_Genomic	ENSMUSG00000052748.15	novel	NA	NA	NA	NA	60379	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTTTCCGTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	151243827	151243448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_151243400_151243800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001126	chr1	+	483	2	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	26	24316	26	-24314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGAAGGAGATGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	151304424	151309598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_151304854_151309544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001127	chr1	+	725	4	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	14598	5929	14598	-5927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTAAGCGAAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	151318996	151327985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_151319078_151324004_151324249_151325650_151325864_151327798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001128	chr1	+	696	4	ISM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	25380	0	25380	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTGGGCTCGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	151329778	151333914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_151329803_151330728_151330792_151333213_151333341_151333432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001129	chr1	+	479	1	ISM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	29141	0	29035	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	NA	NA	NA	NA	NA	NA	NA	151333433	151333912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_151333400_151333900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001130	chr1	-	721	1	ISM	ENSMUSG00000026484.14	ENSMUST00000187048.7	3201	8	30685	1	8497	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTATTAGATGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	151345877	151345156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_151345200_151345900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001131	chr1	-	1346	4	ISM	ENSMUSG00000026484.14	ENSMUST00000187048.7	3201	8	24455	1329	2267	388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAGACCAAGGCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	151352107	151346484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001132	chr1	-	412	3	ISM	ENSMUSG00000026484.14	ENST00000511357.2	733	5	1588	1499	1588	-1499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTTGAACTTGATAACAA	NA	NA	NA	NA	NA	NA	NA	NA	151352786	151348950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_151349096_151351890_151351998_151352626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001133	chr1	-	323	3	ISM	ENSMUSG00000026484.14	ENST00000511357.2	733	5	28	4439	28	-4439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATGAGCAAGTGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	151354346	151351890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_151351998_151352626_151352784_151354287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001134	chr1	-	1283	1	Genic_Genomic	ENSMUSG00000100594.2	novel	NA	NA	NA	NA	4790	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGGTCATGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	151625979	151624696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_151624700_151626000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001135	chr1	-	1385	2	FSM	ENSMUSG00000100594.2	ENSMUST00000186444.2	1381	2	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGGTCATGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	151630770	151624696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_151625980_151630668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001136	chr1	-	911	4	ISM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	2900	0	2810	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCGTAATCATCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	152259533	152246485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001137	chr1	-	540	5	FSM	ENSMUSG00000014980.15	ENST00000533373.6	540	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTCAGGGCTGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	152262389	152246930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_152247035_152247608_152247647_152259012_152259149_152259449_152259532_152262209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001138	chr1	-	1402	1	FSM	ENSMUSG00000080950.2	ENSMUST00000119836.2	1401	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTTTGTAGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	152606310	152604908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_152604900_152606300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001139	chr1	+	1006	2	FSM	ENSMUSG00000055547.5	ENST00000308641.6	1761	2	755	0	755	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCAGTATACCAAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	152632699	152633916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_152633309_152633519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001140	chr1	+	1596	3	ISM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	2312	-1	2312	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTAACTCTCCAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	152644604	152651349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_152644685_152647114_152647292_152650010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001141	chr1	-	166	1	ISM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	29905	1780	2688	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAAGGTGAGTACCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	153333449	153333283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153333300_153333400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001142	chr1	-	352	2	ISM	ENSMUSG00000042699.12	ENST00000533748.1	1033	5	2137	42	2137	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTAGGCCCTCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	153334000	153333327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153333478_153333798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001143	chr1	-	585	4	ISM	ENSMUSG00000042699.12	ENST00000533748.1	1033	5	11	758	11	7	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTACCCATCTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	153336126	153334043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153334236_153335083_153335212_153335303_153335466_153336023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001144	chr1	-	319	3	ISM	ENSMUSG00000042699.12	ENST00000532521.2	1019	8	5036	0	-4318	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATTTCTAAATAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	153340455	153338297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153338451_153340085_153340160_153340363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001145	chr1	-	534	4	ISM	ENSMUSG00000042699.12	ENST00000532521.2	1019	8	2557	2095	2557	-2095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCCAGTACCAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	153342934	153340392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153340455_153340600_153340815_153341422_153341524_153342777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001146	chr1	-	420	4	ISM	ENSMUSG00000042699.12	ENST00000532521.2	1019	8	32	3160	32	-3160	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATAAGGAGGATGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	153345459	153341457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153341524_153342777_153342935_153344619_153344703_153345345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001147	chr1	-	159	1	ISM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	46595	277	34052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCTTTATTTTAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	153379196	153379037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153379000_153379200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001148	chr1	-	216	3	ISM	ENSMUSG00000042684.9	ENST00000614468.1	892	9	22216	137	22216	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTTCCTTTCTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	153391032	153379174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153379304_153384857_153384898_153390985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001149	chr1	-	198	3	ISM	ENSMUSG00000042684.9	ENST00000614468.1	892	9	21996	5814	21996	6	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGCTGCTGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	153391252	153384851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153384898_153390985_153391033_153391147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001150	chr1	-	578	7	FSM	ENSMUSG00000042684.9	ENST00000367552.6	579	7	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCCCTTGCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	153413247	153384857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_153384898_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001151	chr1	+	550	5	ISM	ENSMUSG00000042671.13	ENST00000483095.6	1415	7	198	2449	125	-1878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCAGGACAGCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	153541579	153566814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_153541663_153543570_153543700_153546528_153546631_153547499_153547565_153566643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001152	chr1	+	999	5	ISM	ENSMUSG00000042671.13	ENST00000483095.6	1415	7	2189	257	2116	-257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACACACCACACCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	153543570	153569006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_153543700_153546528_153546631_153547499_153547565_153566643_153566811_153568470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001153	chr1	+	487	4	ISM	ENSMUSG00000042671.13	ENSMUST00000111814.8	678	6	5101	78	5065	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATCTGCTGTCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	153546519	153568614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_153546631_153547499_153547565_153566643_153566811_153568470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001154	chr1	+	504	3	NNC	ENSMUSG00000042671.13	novel	5614	6	NA	NA	6045	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCTGGGGTTTGGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	153547499	153568744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_153547563_153566643_153566811_153568470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001155	chr1	+	546	1	ISM	ENSMUSG00000042671.13	ENSMUST00000041776.12	8474	7	39950	6803	27266	3	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTCTGAGGTCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	153568720	153569266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_153568700_153569300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001156	chr1	+	568	1	ISM	ENSMUSG00000026475.8	ENSMUST00000027748.8	2339	5	4552	0	4552	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAGGACAGTATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	153620646	153621214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_153620600_153621200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001157	chr1	-	1159	3	ISM	ENSMUSG00000042641.20	ENST00000294854.13	2950	17	16536	28586	16536	-28586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGACTACTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	153703344	153698084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_153698118_153701021_153701990_153703186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001158	chr1	+	2042	2	ISM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	7360	0	6719	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATTTCATTCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	153783049	153785469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_153783232_153783609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001159	chr1	-	1009	1	FSM	ENSMUSG00000056708.6	ENSMUST00000055322.6	3276	1	2267	0	2267	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATTGTCTTGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	154973115	154972106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_154972100_154973100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001160	chr1	-	183	1	ISM	ENSMUSG00000026471.15	ENSMUST00000027744.10	2512	6	18723	0	9714	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAGACCTGTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	155003806	155003623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_155003600_155003800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001161	chr1	-	372	2	ISM	ENSMUSG00000026471.15	ENST00000282990.10	628	3	920	-1	920	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGGTGAGAGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	155012600	155006385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_155006478_155012320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001162	chr1	-	315	2	NNC	ENSMUSG00000026471.15	novel	628	3	NA	NA	970	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAAGGTGAGAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155012550	155006386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_155006472_155012320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001163	chr1	-	561	3	ISM	ENSMUSG00000026471.15	ENST00000617803.5	817	4	919	0	919	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAAGGTGAGAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155012601	155006386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_155006478_155008105_155008295_155012320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001164	chr1	-	95	1	NIC	ENSMUSG00000026471.15	novel	2512	6	NA	NA	7039	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAAGGTGAGAGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155006481	155006386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_155006400_155006500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001165	chr1	-	676	3	ISM	ENSMUSG00000026471.15	ENST00000617803.5	817	4	-2	1771	-2	-1771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCATGTGGAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	155013522	155008157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_155008295_155012320_155012597_155013259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001166	chr1	-	295	2	NNC	ENSMUSG00000026471.15	novel	628	3	NA	NA	87	-6091	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTGGCCATGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	155013433	155012477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_155012597_155013257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001167	chr1	-	186	2	ISM	ENSMUSG00000026471.15	ENSMUST00000027744.10	2512	6	59	9804	59	-7041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCACTACATACGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	155022470	155013427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_155013521_155022377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001168	chr1	+	239	2	ISM	ENSMUSG00000026470.15	ENSMUST00000195302.6	955	8	111	24100	111	-24100	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCCTTCTCTGTCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	155034604	155049901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_155034674_155049731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001169	chr1	+	274	2	ISM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	38640	3527	38607	-3527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGCTTTGAGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	155073100	155077878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_155073182_155077685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001170	chr1	+	242	1	Genic_Genomic	ENSMUSG00000026470.15	novel	NA	NA	NA	NA	46671	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGATTGGTCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	155081164	155081406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_155081200_155081400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001171	chr1	+	996	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	155433862	155448034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001172	chr1	+	1554	2	ISM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	119081	2860	119077	-2860	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATTTTTAAAAAATACTA	NA	NA	NA	NA	NA	NA	NA	NA	155552948	155564216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_155552981_155562694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001173	chr1	+	1514	1	ISM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	131695	0	131691	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGGCCAAATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	155565562	155567076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_155565600_155567100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001174	chr1	-	220	1	ISM	ENSMUSG00000026466.17	ENSMUST00000169241.8	3716	10	29985	14	29985	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATGTTATAAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	155880578	155880358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_155880400_155880600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001175	chr1	-	282	2	ISM	ENSMUSG00000026466.17	ENSMUST00000169241.8	3716	10	21450	2879	21450	-697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTCCCTCGGCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	155889113	155883223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_155883456_155889063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001176	chr1	+	608	2	ISM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	155	1898	155	-1691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTACATTGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	155916817	155927584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_155916881_155927039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001177	chr1	+	788	1	Genic_Genomic	ENSMUSG00000050565.17	novel	NA	NA	NA	NA	12035	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTTTGTCTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	155928697	155929485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_155928700_155929500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001178	chr1	-	862	6	ISM	ENSMUSG00000026601.15	ENST00000617277.4	1866	15	31302	-1	31302	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTAGAGACCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	156215681	156176576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_156176680_156178927_156179022_156193185_156193464_156208349_156208514_156209945_156210048_156215560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001179	chr1	+	506	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	-1	-60	-1	60	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACAGTGGGTGAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	156193608	156194114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_156193600_156194100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001180	chr1	-	3290	1	ISM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	46517	0	38990	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGTGTAGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	156255384	156252094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_156252100_156255400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001181	chr1	-	3470	3	ISM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	33843	-1886	33843	1886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAGTGTGGAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	156260531	156255476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_156258686_156259773_156259920_156260416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001182	chr1	+	961	4	ISM	ENSMUSG00000026596.14	ENST00000392043.4	1847	9	196	6781	-1	-6781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTGCTGAGAGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	156386555	156457696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_156386776_156450054_156450226_156452857_156453154_156457422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001183	chr1	+	424	4	ISM	ENSMUSG00000026596.14	ENST00000344730.7	4426	13	87	18501	87	-11493	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCACGGACCTGTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	156443565	156452984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_156443629_156448408_156448472_156450054_156450226_156452857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001184	chr1	+	449	3	ISM	ENSMUSG00000026596.14	ENST00000504405.5	3017	11	8861	8780	8861	-2971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGGTTGACATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	156458912	156461506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_156459000_156460649_156460828_156461322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001185	chr1	+	426	3	ISM	ENSMUSG00000026596.14	ENST00000504405.5	3017	11	10661	7526	10661	-1717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTGTATGAACTTATG	NA	NA	NA	NA	NA	NA	NA	NA	156460712	156462760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_156460828_156461322_156461508_156462634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001186	chr1	+	486	3	ISM	ENSMUSG00000026596.14	ENST00000504405.5	3017	11	14331	1504	14331	-1504	internal_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATGAACTCACGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	156464382	156468782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_156464478_156468008_156468183_156468565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001187	chr1	+	1585	3	ISM	ENSMUSG00000026596.14	ENST00000504405.5	3017	11	17955	0	17955	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCGTCGGCTGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	156468006	156470286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_156468183_156468565_156468800_156469111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001188	chr1	+	1071	1	ISM	ENSMUSG00000026596.14	ENST00000502732.6	4997	12	82849	1199	19164	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCGTCGGCTGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	156469215	156470286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_156469200_156470300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001189	chr1	+	436	1	ISM	ENSMUSG00000026596.14	ENSMUST00000166172.9	10151	13	84494	5652	20999	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCTCAGGGTTTAACCT	NA	NA	NA	NA	NA	NA	NA	NA	156471050	156471486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_156471000_156471500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001190	chr1	-	1354	1	Genic_Genomic	ENSMUSG00000060519.12	novel	NA	NA	NA	NA	19345	1	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGATGGTTCTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	156482539	156481185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_156481200_156482500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001191	chr1	-	1553	3	ISM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	7636	1021	7594	385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGGACCACCTAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	156494290	156482207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_156483514_156484041_156484167_156494168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001192	chr1	-	2170	1	ISM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	38371	0	38371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTGGTTAATCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	156508271	156506101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_156506100_156508300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001193	chr1	+	914	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	280	0	280	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGCCCAGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	157240201	157247806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_157240696_157241313_157241366_157247438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001194	chr1	+	370	1	FSM	ENSMUSG00000049881.14	ENSMUST00000189791.2	251	1	-35	-84	-35	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGCCCAGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	157247436	157247806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_157247400_157247800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001195	chr1	+	642	5	ISM	ENSMUSG00000033488.12	ENST00000476232.6	937	8	5669	16111	5669	-16079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGACGGCGCGTAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	157291977	157299986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_157292038_157292534_157292601_157293281_157293392_157298185_157298307_157299701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001196	chr1	+	538	4	ISM	ENSMUSG00000033488.12	ENST00000507834.3	699	6	6971	16075	6971	-16075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGGCGCGTAAGGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	157293279	157299990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_157293392_157294735_157294818_157298185_157298297_157299757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001197	chr1	+	604	4	ISM	ENSMUSG00000033488.12	ENST00000476232.6	937	8	6971	-1	6971	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCAAGTCTGCTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	157293279	157316098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_157293392_157298185_157298307_157299701_157299987_157316012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001198	chr1	+	474	4	ISM	ENSMUSG00000033488.12	ENST00000507834.3	699	6	8428	0	8428	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCCCTCAAGTAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	157294736	157316065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_157294818_157298185_157298297_157299757_157299987_157316012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001199	chr1	-	1410	3	ISM	ENSMUSG00000026725.18	ENSMUST00000131919.2	3987	18	50589	-939	50584	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTCTCTTGTTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	159924869	159912598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_159913739_159915962_159916127_159924763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001200	chr1	+	1924	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	71	1004	-17	-1004	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCGATTAACTCAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	160022855	160028736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_160022882_160024515_160024675_160026997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001201	chr1	+	1829	1	Genic_Genomic	ENSMUSG00000058267.14	novel	NA	NA	NA	NA	5044	5	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTGATCTGGCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	160027916	160029745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_160027900_160029700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001202	chr1	-	2118	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	0	-20	0	20	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGGGCAATGACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	160040445	160029916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001203	chr1	-	226	2	FSM	ENSMUSG00000014226.11	ENST00000406752.1	222	2	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACATTACCTTGACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	160036163	160034249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_160034280_160035967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001204	chr1	-	1157	5	ISM	ENSMUSG00000026721.17	ENST00000367688.3	1414	7	12822	-61	12822	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGGGGTTGATTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	160066208	160051243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001205	chr1	-	250	1	ISM	ENSMUSG00000026721.17	ENSMUST00000028052.12	6338	9	127587	4561	27476	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGTTTCACTCTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	160051554	160051304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_160051300_160051600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001206	chr1	-	222	2	ISM	ENSMUSG00000026721.17	ENST00000367688.3	1414	7	3889	14792	3889	-14792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCAGGCAGGCTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	160075141	160066096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_160066206_160075028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001207	chr1	-	308	2	ISM	ENSMUSG00000026721.17	ENST00000367688.3	1414	7	14	23723	14	9519	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTCCTTCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	160079016	160075027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_160075140_160078820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001208	chr1	-	297	1	Genic_Genomic	ENSMUSG00000026721.17	novel	NA	NA	NA	NA	-5809	4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATTTCCACAAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	160084839	160084542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_160084500_160084800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001209	chr1	-	556	3	FSM	ENSMUSG00000026721.17	ENST00000486220.5	592	3	36	0	36	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGTGATTTCCACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	160134918	160084546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_160084837_160085012_160085106_160134745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001210	chr1	+	251	3	ISM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	-37	2522	-37	-2520	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTACTGAATAGTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	160862599	160863585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160862765_160863321_160863375_160863552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001211	chr1	+	126	3	ISM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	584	2293	584	-2289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTTTGTGTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	160863319	160863816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160863375_160863552_160863585_160863777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001212	chr1	+	106	3	ISM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	813	1958	813	-1954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAACTAAAGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	160863548	160864151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160863585_160863777_160863815_160864118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001213	chr1	+	103	3	ISM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	1040	1687	1040	-1683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATTGAAAAACACTT	NA	NA	NA	NA	NA	NA	NA	NA	160863775	160864422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160863815_160864118_160864150_160864389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001214	chr1	+	122	3	ISM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	2351	268	2348	-266	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTGAGAACTGCAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	160865083	160865839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160865118_160865564_160865608_160865794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001215	chr1	+	182	3	ISM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	2824	-2	2821	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160865556	160866109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160865608_160865794_160865843_160866026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001216	chr1	+	85	1	NIC	ENSMUSG00000053332.14	novel	430	8	NA	NA	3289	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160866024	160866109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_160866000_160866100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001217	chr1	-	615	1	ISM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	29443	0	29013	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTGCATGTCCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	160868785	160868170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_160868200_160868800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001218	chr1	-	896	4	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	24801	-271	24801	271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTCAGTTCATCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	160872997	160868961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001219	chr1	-	707	3	ISM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	-349	23607	81	-23607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATTGCCACGGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	160898147	160892839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_160892862_160896649_160896750_160897562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001220	chr1	+	843	3	ISM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	49	7982	49	-7982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTGCCGAAAAGCAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	160898385	160905926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160898927_160902326_160902501_160905798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001221	chr1	+	726	2	ISM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	12309	0	12309	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTATTTATTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	160910645	160913908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_160911021_160913557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001222	chr1	-	215	1	Genic_Genomic	ENSMUSG00000026701.16	novel	NA	NA	NA	NA	10845	5	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTTGTGTTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	161067891	161067676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_161067700_161067900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001223	chr1	-	299	2	ISM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	7444	101	7444	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCACATCCAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	161071292	161069268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_161069420_161071144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001224	chr1	-	296	2	ISM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	6822	1977	6822	-1977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACTGCTCTTAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	161071914	161071144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_161071292_161071765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001225	chr1	-	266	2	ISM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	3766	2623	3766	-2623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATGCCTGTGACGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	161074970	161071790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_161071913_161074826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001226	chr1	-	241	2	ISM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	75	7184	22	-5698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGACAGTGTTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	161078714	161074865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_161074984_161078591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001227	chr1	-	1012	2	ISM	ENSMUSG00000040323.14	ENSMUST00000151268.2	798	3	632	-729	632	729	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAGAACACAGGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	161554426	161553081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_161553876_161554208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001228	chr1	-	788	3	FSM	ENSMUSG00000000817.11	ENST00000340030.4	803	3	18	-3	18	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTAAAATGATCTACT	NA	NA	NA	NA	NA	NA	NA	NA	161615840	161609136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_161609540_161610516_161610574_161615512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001229	chr1	-	406	1	NIC	ENSMUSG00000000817.11	novel	1937	4	NA	NA	6315	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTTTAAAATGATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	161609543	161609137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_161609100_161609500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001230	chr1	-	483	3	NNC	ENSMUSG00000000817.11	novel	803	3	NA	NA	255	-69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAACTCTCTCTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	161615603	161609208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_161609540_161610512_161610574_161615512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001231	chr1	+	296	2	FSM	ENSMUSG00000026698.9	ENSMUST00000028021.7	2196	2	14	1886	14	-1886	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATAATGTGTGCTCAACG	NA	NA	NA	NA	NA	NA	NA	NA	161796770	161798013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_161796849_161797795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001232	chr1	+	179	1	FSM	ENSMUSG00000026698.9	ENSMUST00000193784.2	4207	1	2926	1102	2926	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGACTACATATGATAG	NA	NA	NA	NA	NA	NA	NA	NA	161799722	161799901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_161799700_161799900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001233	chr1	+	287	1	FSM	ENSMUSG00000026698.9	ENSMUST00000193784.2	4207	1	3946	-26	3946	25	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGGTTTGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	161800742	161801029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_161800700_161801000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001234	chr1	-	818	1	ISM	ENSMUSG00000040265.17	ENSMUST00000086074.12	7523	21	489915	0	307461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAATTCCTCATTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	161815688	161814870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_161814900_161815700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001235	chr1	-	885	2	ISM	ENSMUSG00000040265.17	ENST00000355305.9	2996	21	466891	-364	284591	364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCAGTTGATAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	161838558	161818897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_161819661_161838436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001236	chr1	+	406	4	ISM	ENSMUSG00000026696.16	ENSMUST00000194810.6	600	8	-177	12860	2	-12860	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCCTAGATACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	162398160	162409438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001237	chr1	+	233	3	ISM	ENSMUSG00000026696.16	ENSMUST00000150040.8	901	8	17359	2095	16970	-2052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTTACTGGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	162415764	162420246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_162415866_162417033_162417114_162420194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001238	chr1	+	245	2	ISM	ENSMUSG00000026696.16	ENSMUST00000150040.8	901	8	21789	34	21400	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTTCCAACTAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	162420194	162422307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_162420247_162422114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001239	chr1	+	238	1	Genic_Genomic	ENSMUSG00000026696.16	novel	NA	NA	NA	NA	23903	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAAGGCTGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	162422697	162422935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_162422700_162422900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001240	chr1	-	1099	1	ISM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	68702	0	68658	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTGTCTGCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	162499392	162498293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_162498300_162499400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001241	chr1	-	1534	5	ISM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	26842	0	20201	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGTCTTTCGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	162667337	162657129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_162657884_162660531_162660605_162661098_162661455_162663700_162663901_162667186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001242	chr1	-	755	1	NIC	ENSMUSG00000040181.15	novel	2388	9	NA	NA	29654	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGTCTTTCGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	162657884	162657129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_162657100_162657900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001243	chr1	-	614	3	NNC	ENSMUSG00000040181.15	novel	1561	8	NA	NA	20279	-3577	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAAGGTAACTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	162667259	162661106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_162661448_162663700_162663901_162667186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001244	chr1	-	756	4	ISM	ENSMUSG00000040181.15	ENST00000402921.6	1561	8	16375	3680	9740	-3680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCGCATCTGCCAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	162677798	162661209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_162661455_162663700_162663901_162667186_162667330_162677630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001245	chr1	-	645	4	ISM	ENSMUSG00000040181.15	ENST00000402921.6	1561	8	7042	6170	407	4087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCAAATCAATTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	162687131	162663699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_162663901_162667186_162667330_162677630_162677794_162686993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001246	chr1	-	4985	5	FSM	ENSMUSG00000026586.17	ENSMUST00000075805.13	4986	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTTTTGTTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	163141240	163072687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_163075966_163081545_163081618_163085329_163085512_163089408_163089585_163139963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001247	chr1	-	1002	2	ISM	ENSMUSG00000026586.17	ENSMUST00000027878.14	4952	4	55765	2461	55723	-2461	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCATCGTTTTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	163085514	163075148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_163075966_163085329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001248	chr1	-	2534	5	NNC	ENSMUSG00000040124.6	novel	2538	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	163231230	163212476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_163214267_163219978_163220120_163222159_163222262_163224376_163224739_163231091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001249	chr1	-	2539	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	163231239	163212476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001250	chr1	+	442	2	ISM	ENSMUSG00000026584.15	ENSMUST00000170359.8	4288	14	22470	1644	22470	-1236	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGAATTAATACCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	163779828	163781035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_163780186_163780950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001251	chr1	-	350	1	Genic_Genomic	ENSMUSG00000041406.15	novel	NA	NA	NA	NA	40694	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTACCAGCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	163781671	163781321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_163781300_163781700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001252	chr1	-	360	2	ISM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	39338	348	39338	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCCTGCCTGGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	163783027	163781670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_163781909_163782905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001253	chr1	+	372	1	ISM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	24990	0	24965	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTCTTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	163782323	163782695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_163782300_163782700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001254	chr1	-	397	3	ISM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	29971	8213	29971	-8213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTAAGGAAACTACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	163792394	163789535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_163789656_163792038_163792225_163792303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001255	chr1	+	746	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	33	734	33	-734	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACATCGTTTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	163822490	163824078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_163822641_163823482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001256	chr1	+	719	1	Genic_Genomic	ENSMUSG00000041396.14	novel	NA	NA	NA	NA	1637	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACTGTTCAATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	163824094	163824813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_163824100_163824800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001257	chr1	+	742	4	ISM	ENSMUSG00000026581.15	ENST00000650983.1	1240	7	4	5923	4	-5923	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCATTTGTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	163889597	163893888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_163889761_163890621_163890704_163892870_163893258_163893778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001258	chr1	+	767	4	ISM	ENSMUSG00000026581.15	ENST00000650983.1	1240	7	1028	5442	864	-5442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTTAGAGTGGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	163890621	163894369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_163890704_163892870_163893258_163893778_163893887_163894179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001259	chr1	+	568	3	NNC	ENSMUSG00000026581.15	novel	989	5	NA	NA	-3	-5552	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTGCTTTCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	163892869	163894259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_163893258_163893778_163893887_163894187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001260	chr1	+	950	5	FSM	ENSMUSG00000026581.15	ENST00000236147.6	989	5	39	0	39	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATGTTCAATAACATC	NA	NA	NA	NA	NA	NA	NA	NA	163892911	163899811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_163893258_163893778_163893887_163894179_163894366_163898126_163898317_163899691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001261	chr1	+	594	4	NIC	ENSMUSG00000026581.15	novel	989	5	NA	NA	916	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATGTTCAATAACATC	NA	NA	NA	NA	NA	NA	NA	NA	163893788	163899811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_163893887_163896441_163896628_163898126_163898317_163899691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001262	chr1	+	247	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAAAGAAAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	164053675	164053922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr1_+_164053700_164053900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001263	chr1	+	1032	3	ISM	ENSMUSG00000040918.13	ENST00000236137.10	3415	6	59	4361	0	-2499	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTTAGGCCAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	164076821	164088588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_164077026_164084315_164084919_164088363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001264	chr1	+	1313	3	ISM	ENSMUSG00000040918.13	ENSMUST00000169394.2	894	5	12796	-851	12796	851	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTTTTCCCTTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	164089617	164091938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_164089809_164090188_164090331_164090958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001265	chr1	+	1157	1	Genic_Genomic	ENSMUSG00000040918.13	novel	NA	NA	NA	NA	14981	5	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAGTTCATCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	164091802	164092959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_164091800_164093000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001266	chr1	-	616	1	ISM	ENSMUSG00000026577.14	ENSMUST00000027866.11	3948	9	17069	0	17069	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACTTAGTTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	164117984	164117368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_164117400_164118000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001267	chr1	-	679	1	ISM	ENSMUSG00000026577.14	ENSMUST00000027866.11	3948	9	15418	1588	15418	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAAGGTGCTCATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	164119635	164118956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_164119000_164119600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001268	chr1	-	678	2	ISM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	11701	-317	11696	317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGCAGAGTCGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	164123357	164119381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_164119981_164123278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001269	chr1	-	633	4	ISM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	4938	3764	4933	-3764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGCAGACATACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	164130120	164123462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_164123499_164125807_164125937_164127113_164127314_164129852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001270	chr1	+	371	2	ISM	ENSMUSG00000026575.16	ENSMUST00000191947.6	1635	13	94916	-3	90110	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGACTTTGGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	164230557	164264866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_164230647_164264584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001271	chr1	-	1700	3	ISM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	16714	0	16714	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	NA	NA	NA	NA	NA	NA	NA	164269210	164264677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_164266109_164266867_164266952_164269025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001272	chr1	-	2322	1	ISM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	17780	0	17752	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTGTCTCTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	165004227	165001905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_165001900_165004200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001273	chr1	-	437	5	FSM	ENSMUSG00000040848.12	ENST00000367829.5	439	5	4	-2	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCAGTGTCCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	165021975	165011390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_165011452_165011538_165011575_165015537_165015624_165015816_165015904_165021808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001274	chr1	-	369	4	NNC	ENSMUSG00000040848.12	novel	439	5	NA	NA	58	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATCAGTGTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	165021921	165011391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_165011475_165015537_165015624_165015816_165015904_165021808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001275	chr1	-	386	1	Genic_Genomic	ENSMUSG00000040843.11	novel	NA	NA	NA	NA	24273	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCGTCATGTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	165040239	165039853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_165039900_165040200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001276	chr1	-	567	4	ISM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	14333	3269	14333	-3269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGCTCCAGAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	165050179	165043123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001277	chr1	-	359	4	ISM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	9337	5531	9337	-5531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATCCAGAGAGAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	165055175	165045385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_165045415_165047667_165047764_165050097_165050230_165055073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001278	chr1	-	412	3	ISM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	8496	10243	8496	-10243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTACTCAAATTAATCC	NA	NA	NA	NA	NA	NA	NA	NA	165056016	165050097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_165050230_165055073_165055174_165055836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001279	chr1	-	378	2	ISM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	4	15994	4	-15994	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGAAAGTAGGTGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	165064508	165055848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_165056017_165064298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001280	chr1	+	637	2	ISM	ENSMUSG00000040836.16	ENST00000539777.5	1621	5	6	11195	6	-11140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCAAGGAGTGGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	165109898	165138226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_165110147_165137837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001281	chr1	+	1780	5	ISM	ENSMUSG00000040836.16	ENSMUST00000111450.3	6862	6	3557	4893	3557	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTCAGTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	165133748	165149421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_165134162_165137837_165138563_165144808_165144914_165146317_165146438_165149004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001282	chr1	+	420	1	NIC	ENSMUSG00000040836.16	novel	6862	6	NA	NA	18812	2	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCAGTTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	165149003	165149423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_165149000_165149400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001283	chr1	+	1006	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCCCCCACTTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	165288624	165308783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001284	chr1	+	911	4	NNC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	103	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCCCCCACTTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	165288708	165308783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_165289081_165305759_165305875_165307035_165307148_165308471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001285	chr1	-	699	1	ISM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	41583	0	16608	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	165420507	165419808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_165419800_165420500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001286	chr1	-	895	3	ISM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	29784	785	4801	385	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATTGTCCTTGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	165432314	165420593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_165421247_165429318_165429425_165432178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001287	chr1	+	2089	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	74	0	74	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGACTGATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	165591388	165602877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001288	chr1	+	1467	1	Genic_Genomic	ENSMUSG00000040713.13	novel	NA	NA	NA	NA	4367	1	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGGACTGATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	165601411	165602878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_165601400_165602900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001289	chr1	-	2492	1	ISM	ENSMUSG00000026564.10	ENSMUST00000192369.6	4045	6	27283	0	27257	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCATTCTGGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	165928208	165925716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_165925700_165928200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001290	chr1	+	1251	4	ISM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	9572	221	9572	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTTTCAAGTGGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	166216237	166220969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_166216341_166217404_166217557_166219391_166219555_166220136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001291	chr1	+	857	1	ISM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	13668	0	13668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTCCTGTTTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	166220333	166221190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_166220300_166221200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001292	chr1	-	470	1	ISM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	61968	0	61968	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTGTGGGTGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	167050921	167050451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_167050500_167050900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001293	chr1	-	560	2	ISM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	145	14606	145	-14606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGGGAGTTGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	167112744	167065057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_167065218_167112344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001294	chr1	+	882	4	ISM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	7863	-1	7863	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTCCTGTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	167143809	167158355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_167143859_167146830_167146899_167153444_167153590_167157735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001295	chr1	+	1024	3	ISM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	14517	359	14517	-359	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGCTCAGTGGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	167192076	167195742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_167192219_167193343_167193457_167194973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001296	chr1	+	815	1	Genic_Genomic	ENSMUSG00000026687.15	novel	NA	NA	NA	NA	17728	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCCGTCTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	167195287	167196102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_167195300_167196100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001297	chr1	-	550	1	Genic_Genomic	ENSMUSG00000026688.6	novel	NA	NA	NA	NA	21327	1	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTTCTTAAGCAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	167200083	167199533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_167199500_167200100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001298	chr1	-	858	5	ISM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	15423	151	15423	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTCACATGAGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	167205987	167199685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001299	chr1	-	4232	1	ISM	ENSMUSG00000052534.16	ENSMUST00000176540.8	6876	9	274124	0	179052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACACACTTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	167985342	167981110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_167981100_167985300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001300	chr1	-	722	1	Genic_Genomic	ENSMUSG00000026683.15	novel	NA	NA	NA	NA	32760	4	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGGCAAATGGATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	169326220	169325498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_169325500_169326200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001301	chr1	-	1002	3	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	25269	-78	25252	78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGCTCATTTGACGCT	NA	NA	NA	NA	NA	NA	NA	NA	169333728	169325801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169326490_169332033_169332170_169333550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001302	chr1	-	319	2	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	24043	7670	24026	4136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCATTCCAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	169334954	169333549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169333727_169334812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001303	chr1	-	280	2	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	20891	8932	20874	2874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTGGGCAGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	169338106	169334811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169334954_169337968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001304	chr1	-	248	3	ISM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	17870	333	17870	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTATAAAGACAAGATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	169341110	169338018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169338107_169339735_169339799_169341013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001305	chr1	-	262	3	ISM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	14753	3335	14753	-3335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACGGTATCCGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	169344227	169341020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169341111_169342480_169342555_169344129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001306	chr1	-	251	3	ISM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	5961	12778	5961	-12778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGGCTTCTTACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	169353019	169350463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169350501_169351472_169351548_169352880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001307	chr1	-	255	3	ISM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	23	15221	23	-15221	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCGATTTTCTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	169358957	169352906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169353019_169356304_169356381_169358890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001308	chr1	-	370	4	ISM	ENSMUSG00000038530.12	ENST00000531057.5	531	5	2319	0	2319	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTAAAACTAGCCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	169572892	169571109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169571192_169571967_169572087_169572243_169572306_169572785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001309	chr1	-	301	3	ISM	ENSMUSG00000038530.12	ENST00000531057.5	531	5	2319	845	2319	-845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGAGTTCATCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	169572892	169571954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_169572087_169572243_169572306_169572785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001310	chr1	+	1134	3	FSM	ENSMUSG00000097503.3	ENSMUST00000180638.3	1135	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGTTCCATTCCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	169796978	169799965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_169797145_169798018_169798372_169799350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001311	chr1	+	1137	5	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	48	16146	48	-16146	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGGTCCCTCCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	170472148	170494212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001312	chr1	+	1138	5	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	3161	13665	3161	-13665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACCCTTGGTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	170475261	170496693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001313	chr1	+	1756	3	ISM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	24219	0	24219	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGCTCATTTTCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	170496319	170510358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_170496833_170508605_170508783_170509292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001314	chr1	+	1070	1	Genic_Genomic	ENSMUSG00000038463.9	novel	NA	NA	NA	NA	37189	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCATTTTCGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	170509289	170510359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_170509300_170510400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001315	chr1	-	4414	1	ISM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	158684	0	146091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTCTGTACAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	170536656	170532242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170532200_170536700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001316	chr1	-	524	1	ISM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	158008	4566	145415	2	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGGGGAAGTGACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	170537332	170536808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170536800_170537300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001317	chr1	-	694	3	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	67716	354	67716	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAGACCCACTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	170615031	170537164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170537657_170574674_170574760_170614914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001318	chr1	-	603	4	ISM	ENSMUSG00000026663.7	ENST00000680462.1	1623	13	20136	12299	20136	-12299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGGTGACAACCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	170662611	170627212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170627315_170642991_170643084_170646815_170647002_170662388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001319	chr1	-	632	4	ISM	ENSMUSG00000026663.7	ENST00000680462.1	1623	13	14292	28151	14292	-28151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTCCAAAGCGAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	170668455	170643064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170643084_170646815_170647002_170662388_170662610_170668249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001320	chr1	-	595	4	ISM	ENSMUSG00000026663.7	ENST00000680462.1	1623	13	6017	47477	6017	-47477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAGTACTTTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	170676730	170662390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170662610_170668249_170668454_170669254_170669382_170676685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001321	chr1	-	529	4	ISM	ENSMUSG00000026663.7	ENST00000680462.1	1623	13	2186	53335	2186	-53335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCATGGAGACTATGACG	NA	NA	NA	NA	NA	NA	NA	NA	170680561	170668248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170668454_170669254_170669382_170676685_170676787_170680465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001322	chr1	-	1277	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	11	86	11	-86	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATATATACAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	170713098	170701842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001323	chr1	-	1116	4	FSM	ENSMUSG00000070524.2	ENST00000336830.9	1114	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGGGCCGAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	170739850	170734867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_170735273_170735419_170735607_170736200_170736468_170739593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001324	chr1	-	1076	4	FSM	ENSMUSG00000070524.2	ENST00000367946.7	1073	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGGGCCGAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	170739851	170734867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_170735273_170735419_170735566_170736200_170736468_170739593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001325	chr1	-	470	2	FSM	ENSMUSG00000038421.14	ENST00000674251.1	464	2	-4	-2	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTGTATATGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	170755210	170748397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_170748688_170755030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001326	chr1	-	414	2	NNC	ENSMUSG00000038421.14	novel	425	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGTGTATATGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	170755167	170748398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_170748676_170755030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001327	chr1	-	289	1	NIC	ENSMUSG00000038421.14	novel	1679	5	NA	NA	6465	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGTGTATATGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	170748687	170748398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_170748400_170748700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001328	chr1	-	717	3	ISM	ENSMUSG00000038421.14	ENST00000367959.6	937	4	5255	-1	5201	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGTGTATATGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	170749951	170748398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170748688_170749086_170749354_170749790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001329	chr1	-	581	3	FSM	ENSMUSG00000026656.16	ENST00000236937.13	573	3	-4	-4	-4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTATCCTTGGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	170795802	170793312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_170793381_170794010_170794270_170795548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001330	chr1	-	572	3	NNC	ENSMUSG00000026656.16	novel	573	3	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTAGTATCCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	170795799	170793315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_170793378_170794010_170794270_170795548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001331	chr1	-	580	3	NNC	ENSMUSG00000026656.16	novel	573	3	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTAGTATCCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	170795800	170793315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_170793381_170794010_170794270_170795544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001332	chr1	-	564	3	NNC	ENSMUSG00000026656.16	novel	573	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTAGTATCCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	170795798	170793315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_170793381_170794010_170794270_170795558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001333	chr1	-	560	3	NNC	ENSMUSG00000026656.16	novel	573	3	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTAGTATCCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	170795797	170793315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_170793381_170794010_170794253_170795544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001334	chr1	+	572	2	ISM	ENSMUSG00000026649.15	ENSMUST00000027959.11	1034	6	4382	0	4382	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTACGTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	170953611	170954536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_170953780_170954132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001335	chr1	-	1537	1	ISM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	21902	0	21890	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTGACCATACTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	170956270	170954733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170954700_170956300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001336	chr1	-	1721	3	ISM	ENSMUSG00000058076.13	ENSMUST00000081560.5	815	5	11836	-996	11836	996	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGGCAGCAGAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	170966324	170955979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_170957475_170963561_170963726_170966262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001337	chr1	+	430	3	ISM	ENSMUSG00000056569.12	ENSMUST00000111334.2	1278	6	4	1622	-1	-1622	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTCACATGTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	170983087	170986454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_170983218_170985929_170986097_170986321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001338	chr1	+	331	3	ISM	ENSMUSG00000056569.12	ENST00000526189.3	1234	6	3232	715	3232	-673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTAGGGCTTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	170986320	170987403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_170986455_170987066_170987203_170987342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001339	chr1	+	385	3	ISM	ENSMUSG00000056569.12	ENSMUST00000111334.2	1278	6	4004	357	3999	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCGGCCTGCAGTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	170987087	170987719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_170987203_170987342_170987404_170987510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001340	chr1	+	264	2	NNC	ENSMUSG00000056569.12	novel	1278	6	NA	NA	4249	-372	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGAGCTCGGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	170987337	170987704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_170987408_170987510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001341	chr1	+	251	1	ISM	ENSMUSG00000056569.12	ENSMUST00000070758.10	2002	8	9590	579	4781	2	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCCCCGCCCCCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	170987869	170988120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_170987900_170988100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001342	chr1	+	417	3	ISM	ENSMUSG00000005677.15	ENST00000367980.6	910	7	-4	1141	-4	-651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAACTTAACCAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	171041939	171044118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171042055_171042512_171042644_171043947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001343	chr1	+	353	3	FSM	ENSMUSG00000005677.15	ENST00000508387.5	340	3	-7	-6	-7	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATTATGGAACAACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	171042507	171045265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_171042644_171044644_171044791_171045194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001344	chr1	+	657	5	FSM	ENSMUSG00000005677.15	ENST00000504010.5	650	5	-5	-2	-5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACATTATGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	171042509	171045261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171045194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001345	chr1	+	330	3	NNC	ENSMUSG00000005677.15	novel	340	3	NA	NA	8	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACATTATGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	171042522	171045261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_171042644_171044644_171044791_171045198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001346	chr1	+	787	6	FSM	ENSMUSG00000005677.15	ENST00000412844.6	797	6	17	-7	17	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTATGGAACAACAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	171042531	171045266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171044865_171045000_171045181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001347	chr1	-	296	1	ISM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	6208	0	5878	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAGGCTAGATGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	171043875	171043579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171043600_171043900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001348	chr1	+	137	1	NIC	ENSMUSG00000005677.15	novel	1414	9	NA	NA	2121	3	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGACGCAGTCCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	171044635	171044772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_171044600_171044800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001349	chr1	+	344	3	ISM	ENSMUSG00000005677.15	ENST00000428574.6	893	7	2700	-2	2129	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACATTATGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	171044643	171045261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171044791_171044882_171045000_171045181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001350	chr1	+	348	3	ISM	ENSMUSG00000005677.15	ENST00000367982.8	897	7	2700	-2	2129	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACATTATGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	171044643	171045261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171044791_171044865_171045000_171045194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001351	chr1	+	197	2	NNC	ENSMUSG00000005677.15	novel	797	6	NA	NA	2351	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACATTATGGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	171044865	171045261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_171045000_171045198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001352	chr1	-	318	2	ISM	ENSMUSG00000005674.10	ENSMUST00000111327.8	2812	9	2311	1621	2311	-1621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGACTCCTAGGTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	171047442	171046991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171047230_171047362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001353	chr1	-	316	2	ISM	ENSMUSG00000005674.10	ENSMUST00000111327.8	2812	9	30	3773	30	-3773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCCCACTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	171049723	171049143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171049209_171049472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001354	chr1	-	318	2	ISM	ENSMUSG00000005674.10	ENSMUST00000111326.8	2753	9	-15	4123	-15	-4123	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCACCGGTTGTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	171050032	171049493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171049723_171049943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001355	chr1	-	556	5	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	9901	-1	9901	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAATGTGTCTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	171064790	171062420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001356	chr1	-	459	1	NIC	ENSMUSG00000013593.13	novel	1623	13	NA	NA	11791	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGGCCCCTAAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	171062900	171062441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_171062400_171062900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001357	chr1	-	869	5	ISM	ENSMUSG00000013593.13	ENST00000679176.1	1978	12	9246	21	9055	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATTATATTAAATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	171065636	171062463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001358	chr1	-	435	4	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	8748	1752	8748	-1731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGGGCGGGGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	171065943	171064173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171064271_171064708_171064839_171065513_171065634_171065855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001359	chr1	-	604	5	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	8223	2287	8223	-2266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCCTCAGGGGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	171066468	171064708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001360	chr1	-	476	4	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	7725	3434	7725	-3413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGAGGCCGTAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	171066966	171065855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171065942_171066083_171066162_171066278_171066467_171066842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001361	chr1	-	580	4	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	5983	3662	5983	-3641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGACAGAACTCGACGCG	NA	NA	NA	NA	NA	NA	NA	NA	171068708	171066083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171066162_171066278_171066467_171066842_171066964_171068515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001362	chr1	-	399	3	NNC	ENSMUSG00000013593.13	novel	1545	12	NA	NA	5984	-3940	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTGGATGTTTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	171068707	171066382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_171066467_171066842_171066964_171068513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001363	chr1	-	506	4	ISM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	920	3963	920	-3942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTGGATGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	171073771	171066384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171066467_171066842_171066964_171068515_171068707_171073659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001364	chr1	-	739	4	ISM	ENSMUSG00000013593.13	ENST00000679176.1	1978	12	0	4400	0	-4400	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTATTTCTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	171074882	171066842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171066964_171068515_171068707_171073659_171073767_171074562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001365	chr1	+	501	2	ISM	ENSMUSG00000006403.14	ENSMUST00000111314.2	3761	8	5620	1544	5620	-1543	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCCTCCTCCCCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	171085304	171086662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171085464_171086320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001366	chr1	+	1057	1	Genic_Genomic	ENSMUSG00000006403.14	novel	NA	NA	NA	NA	7482	17	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACAAGAGTGGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	171087166	171088223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_171087200_171088200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001367	chr1	+	320	2	ISM	ENSMUSG00000052423.16	ENSMUST00000126699.4	1758	8	1515	4180	1515	-4180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGCTTGCGTACGGC	NA	NA	NA	NA	NA	NA	NA	NA	171099449	171100288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171099572_171100090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001368	chr1	+	365	2	ISM	ENSMUSG00000052423.16	ENSMUST00000126699.4	1758	8	2154	2819	2154	-2819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTGTGCGACCCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	171100088	171101649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171100327_171101522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001369	chr1	+	410	3	ISM	ENSMUSG00000052423.16	ENSMUST00000126699.4	1758	8	3586	920	3586	-920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCCACAGGTAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	171101520	171103548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171101714_171101835_171101959_171103454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001370	chr1	+	294	2	ISM	ENSMUSG00000052423.16	ENSMUST00000126699.4	1758	8	5517	604	5517	-604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTCAAGAGATGCTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	171103451	171103864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171103560_171103678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001371	chr1	+	311	1	ISM	ENSMUSG00000052423.16	ENSMUST00000064272.10	1998	8	6260	0	6223	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGTGATTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	171104157	171104468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171104200_171104500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001372	chr1	-	150	1	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	3851	4	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGTCCCGTCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	171104775	171104625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_171104600_171104800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001373	chr1	-	476	4	ISM	ENSMUSG00000062729.13	ENST00000544598.5	665	6	528	-3	528	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGTCCCGTCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	171108098	171104626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171104773_171104858_171104902_171105019_171105170_171107961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001374	chr1	-	182	2	NNC	ENSMUSG00000062729.13	novel	665	6	NA	NA	3723	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCCCCTGTCCCGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	171104903	171104629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_171104767_171104858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001375	chr1	-	305	3	ISM	ENSMUSG00000062729.13	ENST00000544598.5	665	6	283	466	283	-466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCCCAGGAGGCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	171108343	171105095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171105170_171107961_171108097_171108247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001376	chr1	-	285	3	ISM	ENSMUSG00000062729.13	ENST00000544598.5	665	6	0	3376	0	-3376	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTAGGCCGGCTGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	171108626	171108005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171108097_171108247_171108343_171108527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001377	chr1	+	608	3	ISM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	8	2752	8	-2686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGGATACTACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	171156983	171166498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171157095_171165819_171166209_171166390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001378	chr1	+	595	3	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	6875	1277	6875	-1277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAAATTCAGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	171165868	171167907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171166209_171166390_171166499_171167760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001379	chr1	+	728	3	ISM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	7396	317	7396	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACCGCCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	171166389	171168867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171166499_171167760_171167908_171168395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001380	chr1	-	1932	1	Genic_Genomic	ENSMUSG00000013997.11	novel	NA	NA	NA	NA	3127	1	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTGACTTGGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	171170069	171168137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_171168100_171170100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001381	chr1	+	461	1	ISM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	12084	642	9803	7	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGCTGTGGCCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	171168796	171169257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171168800_171169300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001382	chr1	+	541	1	Genic_Genomic	ENSMUSG00000013973.13	novel	NA	NA	NA	NA	10367	2	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTTTTCTGAAACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	171169360	171169901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_171169400_171169900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001383	chr1	-	590	3	ISM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	1817	225	1800	-225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTAGGCAGGACACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	171171396	171170036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171170366_171171005_171171132_171171261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001384	chr1	-	354	3	ISM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	1480	1202	1463	-1202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGGAGGTAAGAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	171171733	171171013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171171132_171171261_171171396_171171631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001385	chr1	-	492	3	ISM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	1106	1448	1089	-1448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGTTTGGAAAGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	171172107	171171259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171171396_171171631_171171736_171171855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001386	chr1	-	601	2	ISM	ENSMUSG00000013997.11	ENST00000368007.8	1703	6	70	2158	69	-2043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGGGTAGGGTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	171173127	171171854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171172108_171172779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001387	chr1	+	882	3	ISM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	10858	738	10858	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGATGGCTCAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	171184095	171186084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171184187_171184272_171184397_171185417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001388	chr1	+	704	1	ISM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	12881	0	12881	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTATTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	171186118	171186822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171186100_171186800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001389	chr1	+	501	3	ISM	ENSMUSG00000048865.17	ENST00000368015.1	3320	8	12	5750	-11	-5750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGCAGCTCCGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	171216510	171231397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171216840_171230780_171230913_171231357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001390	chr1	+	639	2	ISM	ENSMUSG00000048865.17	ENST00000368015.1	3320	8	15890	1941	15867	-1941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGATTCGCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	171232388	171235206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171232747_171234925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001391	chr1	+	476	2	ISM	ENSMUSG00000048865.17	ENST00000368015.1	3320	8	18478	1603	18455	-1603	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGGATGAAGAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	171234976	171235544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171235204_171235295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001392	chr1	+	325	1	ISM	ENSMUSG00000048865.17	ENST00000368015.1	3320	8	20324	0	20301	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAAAAACATAGGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	171236822	171237147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171236800_171237100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001393	chr1	+	326	3	ISM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	1275	1270	1275	-1270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGGTACCACATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	171243280	171244483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171243399_171243702_171243805_171244377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001394	chr1	+	288	2	ISM	ENSMUSG00000026641.14	ENSMUST00000167546.2	1822	10	5126	1413	2369	-855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACCTTATCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	171244374	171244898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171244574_171244809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001395	chr1	+	651	4	ISM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	2803	-125	2803	125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGACAGCCCGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	171244808	171245878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171244898_171245040_171245100_171245208_171245433_171245599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001396	chr1	+	344	1	Genic_Genomic	ENSMUSG00000026641.14_ENSMUSG00000103711.2	novel	NA	NA	NA	NA	-229	5	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGATGTGAGGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	171246371	171246715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_171246400_171246700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001397	chr1	+	941	2	ISM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	25369	641	25369	-641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATATTTGACAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	171290471	171291530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171290509_171290626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001398	chr1	+	937	1	ISM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	26132	0	26132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTATGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	171291234	171292171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171291200_171292200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001399	chr1	+	1143	1	FSM	ENSMUSG00000060244.2	ENSMUST00000081527.2	1273	1	137	-7	137	7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTTTGATGCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	171331182	171332325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_171331200_171332300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001400	chr1	+	488	3	FSM	ENSMUSG00000038147.15	ENST00000311224.8	483	3	-2	-3	-2	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGCTATTCATACATAC	NA	NA	NA	NA	NA	NA	NA	NA	171700274	171712251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_171700516_171700871_171701022_171712154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001401	chr1	+	455	3	NIC	ENSMUSG00000038147.15	novel	483	3	NA	NA	22	2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGCTATTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	171700298	171712250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_171700516_171700871_171701014_171712154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001402	chr1	+	435	3	NNC	ENSMUSG00000038147.15	novel	483	3	NA	NA	44	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGCTATTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	171700320	171712250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_171700510_171700871_171701022_171712154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001403	chr1	+	244	2	ISM	ENSMUSG00000038147.15	ENST00000368048.7	478	3	592	-2	592	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGCTATTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	171700868	171712250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171701014_171712151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001404	chr1	+	100	1	NIC	ENSMUSG00000038147.15	novel	3290	9	NA	NA	11875	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGCTATTCATACATAC	NA	NA	NA	NA	NA	NA	NA	NA	171712151	171712251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_+_171712200_171712300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001405	chr1	-	1153	3	ISM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	14851	0	14851	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	171895511	171893579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_171894364_171894897_171895111_171895355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001406	chr1	-	786	1	NIC	ENSMUSG00000003458.13	novel	2901	17	NA	NA	15997	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	171894365	171893579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_171893600_171894400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001407	chr1	+	384	5	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	6232	24040	6232	-24040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGAACCACGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	171916689	171925308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001408	chr1	+	348	3	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	14782	20266	14782	-20266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGAATTATTTATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	171925239	171929082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171925351_171927234_171927335_171928945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001409	chr1	+	372	3	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	18487	17521	18487	-17521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCTGACTTCTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	171928944	171931827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171929082_171929776_171929860_171931675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001410	chr1	+	430	4	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	25440	10965	25440	-10965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTAATTATCTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	171935897	171938383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171935962_171937352_171937493_171938055_171938142_171938243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001411	chr1	+	447	4	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	26960	9770	26960	-9770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAGTATGATGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	171937417	171939578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171937493_171938055_171938142_171938243_171938383_171939431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001412	chr1	+	451	3	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	27785	9510	27785	-9510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGACTGTGTCGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	171938242	171939838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171938383_171939431_171939595_171939690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001413	chr1	+	431	3	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	29036	8573	29036	-8573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCGGTGAGTTCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	171939493	171940775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171939595_171939690_171939838_171940592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001414	chr1	+	448	4	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	29307	6948	29307	-6948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATTTACACAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	171939764	171942400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171939838_171940592_171940783_171940900_171940997_171942311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001415	chr1	+	386	4	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	30442	4780	30442	-4780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCTGGATGAAGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	171940899	171944568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171940997_171942311_171942401_171942589_171942714_171944492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001416	chr1	+	461	3	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	36295	1743	36295	-1743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGGGAATTCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	171946752	171947605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171946941_171947024_171947136_171947443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001417	chr1	+	401	3	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	36636	355	36636	-355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTGTCCTCAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	171947093	171948993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171947136_171947443_171947606_171948796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001418	chr1	+	985	3	ISM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	37043	5	36984	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	171947441	171949892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171947606_171948796_171948992_171949266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001419	chr1	+	425	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	22	5305	15	-5305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGCAGGTAAGGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	171954343	171957545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001420	chr1	+	594	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	2400	1974	2393	-1974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTCTCTCCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	171956721	171960876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171956888_171957468_171957555_171958178_171958341_171960696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001421	chr1	+	694	4	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	3936	688	3929	-688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTCCCAGGGACGTCG	NA	NA	NA	NA	NA	NA	NA	NA	171958257	171962162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171958341_171960696_171960874_171961566_171961612_171961773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001422	chr1	+	434	1	ISM	ENSMUSG00000003464.14	ENSMUST00000111252.4	2844	6	8090	1208	8090	2	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTTATTTTTCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	171962418	171962852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_171962400_171962900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001423	chr1	+	178	2	ISM	ENSMUSG00000026554.16	ENST00000545306.2	1421	11	216	20689	216	-20689	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGGATGGACAGGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	172000415	172001554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_172000549_172001509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001424	chr1	+	181	2	ISM	ENSMUSG00000026554.16	ENST00000545306.2	1421	11	14727	5658	14727	-5658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCATCTTGCCAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	172014926	172016585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_172015028_172016505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001425	chr1	+	124	1	ISM	ENSMUSG00000026554.16	ENSMUST00000074144.11	4656	13	48088	0	23633	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	172023832	172023956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_172023800_172024000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001426	chr1	-	448	1	Genic_Genomic	ENSMUSG00000013698.13	novel	NA	NA	NA	NA	9630	1	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGATTCTAGAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	172024741	172024293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_172024300_172024700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001427	chr1	-	979	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	-1	1523	-1	-1523	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGAAGATGAGGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	172034372	172025817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001428	chr1	-	113	1	NIC	ENSMUSG00000007097.15	novel	6227	23	NA	NA	23243	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGTCAGAAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	172102297	172102184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_172102200_172102300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001429	chr1	-	157	2	ISM	ENSMUSG00000007097.15	ENST00000392233.7	3194	23	21997	14	21997	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAGGGAGGGACTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	172103543	172102198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172102297_172103484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001430	chr1	-	162	2	ISM	ENSMUSG00000007097.15	ENST00000392233.7	3194	23	21751	1299	21751	-1299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATGTCCACTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	172103789	172103483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172103544_172103687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001431	chr1	-	194	2	ISM	ENSMUSG00000007097.15	ENST00000392233.7	3194	23	19625	1503	19625	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGTCTCTCTAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	172105915	172103687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172103790_172105823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001432	chr1	-	145	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	19460	230	19369	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACCTCATCATCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	172106171	172105879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172105955_172106101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001433	chr1	-	238	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	19071	483	18980	-483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACCTGGAGGACAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	172106560	172106132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172106248_172106437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001434	chr1	-	243	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	18622	799	18531	-799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACAGATTGGTGCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	172107009	172106448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172106562_172106879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001435	chr1	-	226	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	18279	1277	18188	-1277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGCACTGTGACCATC	NA	NA	NA	NA	NA	NA	NA	NA	172107352	172106926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172107035_172107234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001436	chr1	-	207	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	18020	1656	17929	-1656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAGCAGGCGGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	172107611	172107305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172107404_172107502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001437	chr1	-	252	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	17367	1881	17276	-1881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTGTGGAAGGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	172108264	172107530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172107654_172108135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001438	chr1	-	210	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	13462	2516	13371	-2516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTCCTGTGAGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	172112169	172108165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172108273_172112066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001439	chr1	-	209	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	13195	6485	13104	-6485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGATTGATCCCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	172112436	172112134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172112243_172112335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001440	chr1	-	222	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	12283	6782	12192	-6782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTACAGGGCAAGGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	172113348	172112431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172112526_172113220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001441	chr1	-	195	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	11988	7624	11897	-7624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGAACCCTAAGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	172113643	172113273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172113356_172113530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001442	chr1	-	221	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	11742	7895	11651	-7895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCGTGTCTAAGGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	172113889	172113544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172113641_172113764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001443	chr1	-	264	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	10725	8190	10634	-8190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGCATGACAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	172114906	172113839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172113964_172114766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001444	chr1	-	184	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	8673	9293	8582	-9293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGCCATGGAGATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	172116958	172114942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172115036_172116867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001445	chr1	-	227	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	7701	11220	7610	-11220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGACGCTAGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	172117930	172116869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172116986_172117819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001446	chr1	-	225	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	7340	12194	7249	-12194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCTCTTCCCACGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	172118291	172117843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172117955_172118177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001447	chr1	-	206	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	6758	12550	6667	-12550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGAACATGGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	172118873	172118199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172118292_172118759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001448	chr1	-	272	3	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	4387	13208	4296	-13208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGGCTTCTCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	172121244	172118857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172118964_172120893_172120954_172121138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001449	chr1	-	150	2	ISM	ENSMUSG00000007097.15	ENSMUST00000097464.4	3186	20	126	15502	35	-15502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTTGCCATGGTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	172125505	172121151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_172121244_172125447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001450	chr1	+	1758	5	ISM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	46	959	46	-959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGTGCAGCATGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	172139979	172146449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001451	chr1	+	1513	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	0	73	0	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTCTGGGGCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	172327613	172334874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001452	chr1	+	600	4	FSM	ENSMUSG00000026547.16	ENST00000524097.1	600	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATCATACTCTCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	172332714	172334271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_172332899_172333327_172333503_172333752_172333856_172334133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001453	chr1	+	776	1	Genic_Genomic	ENSMUSG00000026547.16	novel	NA	NA	NA	NA	1459	2	mono-exon	FALSE	NA	NA	NA	NA	NA	740	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTTTCTAGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	172334173	172334949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_172334200_172334900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001454	chr1	+	865	6	ISM	ENSMUSG00000026546.17	ENST00000368099.9	1761	11	6154	671	6154	-671	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTGAGAACCAGCAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	172361509	172372752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_172361696_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001455	chr1	+	824	5	ISM	ENSMUSG00000026546.17	ENST00000368099.9	1761	11	10728	0	10728	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTCTCTAAGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	172366083	172373423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001456	chr1	-	852	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	10985	0	10985	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGTTATTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	173799325	173790133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_173790390_173791359_173791549_173798918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001457	chr1	-	1008	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	7598	8785	7598	-8785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTATTTTGTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	173802712	173798918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_173799324_173799756_173799946_173802298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001458	chr1	-	637	3	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	21	12165	21	-12165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTGTGAAAACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	173810289	173802298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_173802713_173804830_173805004_173810239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001459	chr1	-	1032	4	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	109667	0	109667	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTGGAACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	174907124	174886653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001460	chr1	-	608	1	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	24653	1	24653	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAATAGACTAATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	175428548	175427940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_175427900_175428500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001461	chr1	-	1110	4	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	17612	572	17612	-572	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTGAGGCTTACAATC	NA	NA	NA	NA	NA	NA	NA	NA	175435589	175428511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001462	chr1	-	628	4	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	13303	5737	13303	-5737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCGTTGGAGGCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	175439898	175433676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_175433749_175435382_175435587_175437202_175437369_175439712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001463	chr1	-	631	4	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	10735	7529	10735	-7529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCGCTTCCTGGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	175442466	175435468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_175435587_175437202_175437369_175439712_175439896_175442302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001464	chr1	-	640	4	ISM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	8996	9260	8996	-9260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACCACATGCATTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	175444205	175437199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_175437369_175439712_175439896_175442302_175442480_175444094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001465	chr1	-	121	1	ISM	ENSMUSG00000026525.10	ENSMUST00000027809.8	1913	4	30235	0	30235	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTGTCATGTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	175490107	175489986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_175490000_175490100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001466	chr1	-	171	2	ISM	ENSMUSG00000026525.10	ENSMUST00000027809.8	1913	4	488	3157	488	-3157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTACATGCCAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	175519854	175493143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_175493196_175519735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001467	chr1	-	904	1	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	225731	18	225731	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTATGTCAATCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	176850602	176849698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_176849700_176850600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001468	chr1	-	1220	4	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	198562	2474	198562	-2456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTTCTTTATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	176877771	176852154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001469	chr1	-	700	3	FSM	ENSMUSG00000101746.2	ENSMUST00000189507.2	698	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTGAATTGTTAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	177470509	177469105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_177469464_177469575_177469681_177470272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001470	chr1	-	1323	1	Genic_Genomic	ENSMUSG00000015961.9	novel	NA	NA	NA	NA	32081	2	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAAAAGACCAATGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	177591848	177590525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_177590500_177591800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001471	chr1	-	1724	5	ISM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	24351	74	24203	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAATACTGGTTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	177599726	177590601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001472	chr1	+	329	2	FSM	ENSMUSG00000102493.2	ENST00000366639.9	863	2	348	186	348	-186	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTGGCAACACTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	177971222	177971651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_177971355_177971454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001473	chr1	-	321	2	Antisense	novelGene_ENSMUSG00000102493.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACGAGTTTTGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	177971711	177971291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr1_-_177971361_177971459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001474	chr1	+	321	1	ISM	ENSMUSG00000102493.2	ENSMUST00000194128.2	873	2	651	0	643	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCCCACTCTGCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	177971517	177971838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_177971500_177971800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001475	chr1	+	418	3	ISM	ENSMUSG00000026502.14	ENST00000263831.11	820	4	4	5150	4	-5150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATTTAGTTTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	178015315	178072048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_178015524_178065477_178065551_178071911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001476	chr1	+	2539	3	ISM	ENSMUSG00000026502.14	ENST00000263831.11	820	4	50165	-1930	-18192	661	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGGTTGGAAGGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	178065476	178079128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_178065551_178071911_178072049_178076800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001477	chr1	+	274	1	ISM	ENSMUSG00000026502.14	ENSMUST00000161075.8	2590	6	61961	1250	-6725	19	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCGCAGGAGGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	178076943	178077217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_178076900_178077200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001478	chr1	+	473	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTACATGAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	178146692	178150258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001479	chr1	-	1613	1	Genic_Genomic	ENSMUSG00000039630.11	novel	NA	NA	NA	NA	11843	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATGTATTGTAGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	178153519	178151906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_178151900_178153500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001480	chr1	-	1655	2	ISM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	7856	3484	7856	-3484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCCTCACTGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	178157506	178155391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_178156973_178157432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001481	chr1	-	1651	1	ISM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	564424	0	564395	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTCTCTGCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	178781175	178779524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_178779500_178781200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001482	chr1	-	156	2	ISM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	338	16884	338	-16884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCTTTGAAAGTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	179373494	179372503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_179372552_179373386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001483	chr1	+	609	3	ISM	ENSMUSG00000038949.9	ENST00000366511.1	644	4	3	2818	3	-2818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTTCTACCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	179374034	179429297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_179374182_179406902_179407334_179429266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001484	chr1	+	498	3	ISM	ENSMUSG00000038949.9	ENST00000366511.1	644	4	32868	-1	32868	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCATGAGCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	179406899	179432116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_179407334_179429266_179429298_179432083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001485	chr1	-	414	1	ISM	ENSMUSG00000010609.16	ENSMUST00000111106.8	2020	11	25709	12	18325	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCTGGAATGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	180054994	180054580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180054600_180055000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001486	chr1	-	524	3	ISM	ENSMUSG00000010609.16	ENSMUST00000111104.2	1475	10	16312	-61	16309	59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACCTGTCTTGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	180057010	180054948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180055294_180056407_180056527_180056950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001487	chr1	-	374	3	ISM	ENSMUSG00000010609.16	ENST00000678320.1	1805	9	10544	2404	10544	-1975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCAGGGGAGGAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	180062775	180056984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180057053_180057406_180057491_180062553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001488	chr1	-	395	3	ISM	ENSMUSG00000010609.16	ENSMUST00000111104.2	1475	10	6779	7544	6776	-7544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTCGCTTGGGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	180066543	180062553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180062775_180063475_180063544_180066437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001489	chr1	-	434	3	ISM	ENSMUSG00000010609.16	ENSMUST00000111104.2	1475	10	4811	8458	4808	-8458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGTGAGCAGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	180068511	180063467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180063544_180066437_180066580_180068295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001490	chr1	-	455	3	ISM	ENSMUSG00000010609.16	ENSMUST00000111104.2	1475	10	9	11465	6	-11465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTCGTGGTACTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	180073313	180066474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180066580_180068295_180068511_180073178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001491	chr1	+	701	1	ISM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	48837	0	48728	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	180517551	180518252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180517600_180518300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001492	chr1	+	1705	2	ISM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	20864	513	20864	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTTCGTTTGTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	180574471	180581256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180574644_180579723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001493	chr1	+	1564	1	ISM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	26598	0	26598	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTGTCTTTCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	180580205	180581769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180580200_180581800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001494	chr1	-	565	2	FSM	ENSMUSG00000103156.2	ENSMUST00000193209.2	600	2	35	0	35	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCAAGTACCACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	180596186	180591061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_180591486_180596045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001495	chr1	-	303	1	Genic_Genomic	ENSMUSG00000060743.13	novel	NA	NA	NA	NA	11691	1	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGCCTCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	180628698	180628395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_180628400_180628700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001496	chr1	-	460	1	ISM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	10477	1864	9669	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACACAGTAGATTCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	180630720	180630260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180630300_180630700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001497	chr1	-	698	4	FSM	ENSMUSG00000060743.13	ENST00000666609.1	608	4	0	-90	0	76	multi-exon	TRUE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAACATAGGGGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	180640389	180630512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180640254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001498	chr1	-	256	2	ISM	ENSMUSG00000060743.13	ENSMUST00000081026.11	888	4	3380	301	2657	26	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATATTTTTTCCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	180637732	180630562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180630768_180637681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001499	chr1	-	607	4	NNC	ENSMUSG00000060743.13	novel	608	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCCTCTTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	180640388	180630602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_180630771_180637681_180637836_180639363_180639510_180640249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001500	chr1	-	381	3	ISM	ENSMUSG00000060743.13	ENSMUST00000162814.8	724	5	311	7179	0	-7165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTTCAGCGTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	180641197	180637767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180637836_180639363_180639515_180641035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001501	chr1	+	2293	3	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	9970	355	9970	-355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTCACCTGTATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	180688661	180695323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180688784_180689922_180690407_180693636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001502	chr1	+	1735	1	ISM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	15252	0	15252	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGGAGTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	180693943	180695678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180693900_180695700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001503	chr1	+	1430	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	150	0	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	180732007	180735653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001504	chr1	+	693	6	FSM	ENSMUSG00000026520.9	ENST00000612039.4	743	6	50	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGACTCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	180732072	180735203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180734159_180734253_180734354_180734519_180735041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001505	chr1	+	1276	5	NNC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	1415	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	180733437	180735653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_180733619_180733727_180733950_180734159_180734257_180734354_180734519_180735041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001506	chr1	+	592	4	NNC	ENSMUSG00000026520.9	novel	743	6	NA	NA	1427	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGACTCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	180733449	180735203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_180733619_180734159_180734257_180734354_180734519_180735041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001507	chr1	+	110	2	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	4787	22933	4787	-22933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACAAGACTTTGAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	180776386	180779735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180776458_180779696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001508	chr1	+	153	2	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	18383	12019	18383	-12019	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGCCCTCCATCATTATG	NA	NA	NA	NA	NA	NA	NA	NA	180789982	180790649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180790050_180790563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001509	chr1	+	142	2	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	22459	6254	22459	-6254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACCTTCCGCATGATCA	NA	NA	NA	NA	NA	NA	NA	NA	180794058	180796414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180794096_180796309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001510	chr1	-	127	1	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	27889	0	27889	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGGCCAGATACCTT	NA	NA	NA	NA	NA	NA	NA	NA	180817245	180817118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180817100_180817200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001511	chr1	-	181	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	27090	333	27090	-333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCTATTCCTACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	180818044	180817451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180817546_180817957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001512	chr1	-	200	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	25527	875	25527	-875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCAGGGTGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	180819607	180817993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180818084_180819497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001513	chr1	-	172	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	23612	2395	23612	-2395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGGCCTGGAGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	180821522	180819513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180819607_180821443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001514	chr1	-	167	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	22848	4461	22848	-4461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTTTTGGGAGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	180822286	180821579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180821653_180822192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001515	chr1	-	192	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	21500	5133	21500	-5133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAGGCGGCGACTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	180823634	180822251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180822323_180823513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001516	chr1	-	222	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	17743	6505	17743	-6505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGCTGACAGACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	180827391	180823623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180823742_180827287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001517	chr1	-	222	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	15672	10227	15672	-10227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGAAGCAGGTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	180829462	180827345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180827469_180829363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001518	chr1	-	190	2	ISM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	22	12364	22	-12364	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGAGGAGACCTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	180845112	180829482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180829552_180844991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001519	chr1	-	722	1	ISM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	56345	0	51451	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTGATCTGGAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	180915424	180914702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180914700_180915400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001520	chr1	-	321	4	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	37699	0	37699	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAACTTTCCTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	180929176	180922547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180922620_180924700_180924790_180926691_180926769_180929093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001521	chr1	-	359	4	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	34149	2157	34149	-2157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTATGACCTTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	180932726	180924704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001522	chr1	-	328	3	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	32330	6546	32330	-6546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCAAAAGAAATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	180934545	180929093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180929201_180932636_180932737_180934424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001523	chr1	-	449	4	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	25007	11937	25007	-11937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCGTGATATTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	180941868	180934484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180934545_180936724_180936788_180939852_180939958_180941647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001524	chr1	-	584	3	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	21623	17297	21623	-17297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCTACTGTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	180945252	180939844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180939958_180941647_180941867_180945000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001525	chr1	-	460	3	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	18810	19255	18810	-19255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTGTGCATTGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	180948065	180941802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180941867_180945000_180945251_180947919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001526	chr1	-	409	3	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	15325	22558	15325	-22558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAACAACAGGCGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	180951550	180945105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180945251_180947919_180948065_180951431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001527	chr1	-	500	4	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	9667	25372	9667	-25372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCTTGTAGAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	180957208	180947919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180948065_180951431_180951550_180954502_180954605_180957073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001528	chr1	-	361	4	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	8844	28951	8844	-28951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGAAGTTGCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	180958031	180951498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180951550_180954502_180954605_180957073_180957209_180957958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001529	chr1	-	409	4	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	8433	32000	8433	-32000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGTCTGAGCAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	180958442	180954547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180954605_180957073_180957209_180957958_180958036_180958302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001530	chr1	-	344	4	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	161	35414	161	-35414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTAGTGCCAATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	180966714	180957961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_180958036_180958302_180958436_180964437_180964496_180966635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001531	chr1	+	1858	3	ISM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	4953	1185	4953	-1185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	180983448	180995374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_180983537_180989639_180989781_180993745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001532	chr1	+	1717	1	Genic_Genomic	ENSMUSG00000062169.14	novel	NA	NA	NA	NA	16348	1	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTCTATTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	180994843	180996560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_180994800_180996600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001533	chr1	-	670	1	ISM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	34150	3931	34150	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAACAGCACAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	181005393	181004723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_181004700_181005400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001534	chr1	-	684	2	ISM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	29182	20	29179	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGTTGCCCCGTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	181010364	181004743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_181005397_181010333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001535	chr1	-	906	2	FSM	ENSMUSG00000038733.15	ENST00000678307.1	1076	2	172	-2	169	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATACCCAGTGGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	181039374	181038127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_181038300_181038640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001536	chr1	-	720	2	NNC	ENSMUSG00000038733.15	novel	1076	2	NA	NA	348	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATACCCAGTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	181039195	181038128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_181038290_181038636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001537	chr1	-	761	2	NNC	ENSMUSG00000038733.15	novel	1076	2	NA	NA	223	-79	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACAAGTGTTTATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	181039320	181038208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_181038290_181038640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001538	chr1	+	814	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	9	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCTTTCTTGCCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	181952310	181959484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_181952541_181958900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001539	chr1	+	1187	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	3	177	3	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTTCCGTGTTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	181952317	181959795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_181952541_181956248_181956318_181958900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001540	chr1	+	929	1	Genic_Genomic	ENSMUSG00000026511.8	novel	NA	NA	NA	NA	6730	1	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATAGGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	181959044	181959973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_181959000_181960000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001541	chr1	-	2056	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	-1	-7	-1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACTGGAGAAAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	182110370	182103329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_182104459_182106540_182107284_182110186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001542	chr1	-	2016	3	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	27	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACTGGAGAAAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	182110342	182103329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_182104459_182106540_182107272_182110186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001543	chr1	-	1988	3	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGTGTCACTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	182110318	182103336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_182104450_182106540_182107284_182110186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001544	chr1	-	2038	3	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGTGTCACTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	182110364	182103336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_182104454_182106540_182107284_182110186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001545	chr1	-	2052	3	NNC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAGTGTCACTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	182110369	182103336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_182104459_182106536_182107284_182110186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001546	chr1	-	541	1	ISM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	27976	0	27966	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTTCATTCTTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	182141207	182140666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_182140700_182141200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001547	chr1	-	1286	4	FSM	ENSMUSG00000047539.10	ENST00000424254.6	1312	4	39	-13	39	13	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGGACACTATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	182169134	182144060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_182144851_182153818_182153958_182157438_182157549_182168887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001548	chr1	-	2096	1	Genic_Genomic	ENSMUSG00000030768.13	novel	NA	NA	NA	NA	47502	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTCTCCGTCGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	182869924	182867828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_182867800_182869900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001549	chr1	-	718	2	ISM	ENSMUSG00000030768.13	ENST00000675961.1	4575	6	39521	2966	39521	-2966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCGCTCATTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	182877905	182870814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_182871435_182877807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001550	chr1	-	1262	1	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	19359	0	19359	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	183059177	183057915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_183057900_183059200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001551	chr1	-	1299	2	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	17344	947	17344	-945	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTGACAGATTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	183061192	183058862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_183060003_183061033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001552	chr1	-	441	1	ISM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	42772	0	42772	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	183108122	183107681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_183107700_183108100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001553	chr1	-	553	2	ISM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	12874	27665	12874	-27665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGTGACCAGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	183138020	183135346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_183135484_183137604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001554	chr1	+	903	1	Genic_Genomic	ENSMUSG00000104022.2	novel	NA	NA	NA	NA	654	21	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATACCATTTTCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	183202239	183203142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_183202200_183203100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001555	chr1	-	854	1	FSM	ENSMUSG00000044854.8	ENSMUST00000050306.8	967	1	113	0	113	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTTCAGATGTCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	183766082	183765228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_183765200_183766100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001556	chr1	+	2579	3	ISM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	2445	-1	2445	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTACGTGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	183769022	183807834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_183769850_183801048_183801421_183806454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001557	chr1	-	608	3	FSM	ENSMUSG00000103308.6	ENSMUST00000193667.6	553	3	0	-55	0	55	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATGTTATTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	184361670	184342421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_184342774_184347667_184347890_184361636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001558	chr1	-	476	1	Genic_Genomic	ENSMUSG00000073481.10	novel	NA	NA	NA	NA	32339	1	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCCTCTGTGACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	184545739	184545263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_184545300_184545700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001559	chr1	-	607	3	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	23472	431	23472	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCGCATGCTCACGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	184554606	184545695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184546081_184551397_184551545_184554531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001560	chr1	-	410	4	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	13163	6147	13163	-6147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTGACACGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	184564915	184551411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184551545_184554531_184554604_184554685_184554748_184564772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001561	chr1	-	460	3	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	4451	19535	4451	-19535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCAGGCTGTGAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	184573627	184564799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184564914_184566056_184566226_184573450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001562	chr1	-	686	3	ISM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	3	20782	3	-20782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTCCTCCATTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	184578075	184566046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184566226_184573450_184573625_184577742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001563	chr1	-	176	1	Genic_Genomic	ENSMUSG00000026620.12	novel	NA	NA	NA	NA	102773	2	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGAAACTTTCTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	184628994	184628818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_184628800_184629000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001564	chr1	-	300	3	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	94066	1937	94066	-1937	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGACTATGAGCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	184637701	184630922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184631076_184633005_184633051_184637599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001565	chr1	-	141	2	NNC	ENSMUSG00000026620.12	novel	4349	17	NA	NA	94076	-4020	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCGCAGGTGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	184637691	184633005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_184633051_184637595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001566	chr1	-	237	2	ISM	ENSMUSG00000026620.12	ENST00000611084.4	4418	18	92402	8912	92373	-8747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAGAGCGGCGCAGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	184639394	184637732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184637855_184639279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001567	chr1	-	229	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	92364	8761	92364	-8761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGGGAACAGCTCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	184639403	184637746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184637852_184639279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001568	chr1	-	198	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	91141	10362	91141	-10362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTGGCCACCCTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	184640626	184639347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184639445_184640525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001569	chr1	-	218	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	87448	11550	87448	-11550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGCAGGTGACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	184644319	184640535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184640627_184644192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001570	chr1	-	276	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	86943	15271	86943	-15271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGAAGTCACAGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	184644824	184644256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184644387_184644678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001571	chr1	-	243	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	84938	15720	84938	-15720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAGAGGCGCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	184646829	184644705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184644833_184646713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001572	chr1	-	215	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	83390	17728	83390	-17728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGTTTTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	184648377	184646713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184646827_184648275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001573	chr1	-	224	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	80137	19290	80137	-19290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGCTAAGTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	184651630	184648275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184648376_184651506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001574	chr1	-	244	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	79929	22521	79929	-22521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCGCGCTGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	184651838	184651506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184651627_184651714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001575	chr1	-	182	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	77960	22843	77960	-22843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTTTCCAAGGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	184653807	184651828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184651952_184653748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001576	chr1	-	180	3	ISM	ENSMUSG00000026620.12	ENST00000677505.1	4349	17	70227	24927	70198	-24762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTGCTGCTTTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	184661569	184653747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184653806_184658012_184658084_184661518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001577	chr1	-	188	3	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	70198	29027	70198	-29027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGAAAGTGTTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	184661569	184658012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184658084_184660230_184660297_184661518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001578	chr1	-	124	3	ISM	ENSMUSG00000026620.12	ENST00000677505.1	4349	17	56338	29244	56309	-29079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCCCACGGAAGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	184675458	184658064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184658084_184661518_184661568_184675402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001579	chr1	-	163	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	54665	46417	54665	-46417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTAATTAATTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	184677102	184675402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184675457_184676993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001580	chr1	-	262	2	ISM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	3	48096	3	-48096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGGAAATTACCGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	184731764	184677081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_184677198_184731618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001581	chr1	-	1077	1	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	43594	0	43594	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTCTTTGCTTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	185017999	185016922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_185016900_185018000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001582	chr1	-	1199	2	ISM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	41210	1414	41210	-1414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGCTATAATCGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	185020383	185018336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_185019389_185020236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001583	chr1	+	1509	3	ISM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	20121	7	20090	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGGTAATTGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	185084466	185089967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_185084577_185086153_185086260_185088674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001584	chr1	-	782	1	Genic_Genomic	ENSMUSG00000039246.9	novel	NA	NA	NA	NA	28802	4	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGTATAATAATAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	185820705	185819923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_185819900_185820700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001585	chr1	-	800	2	ISM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	27849	256	27849	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCAGATTTGTGAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	185821658	185820183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_185820966_185821640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001586	chr1	-	157	1	ISM	ENSMUSG00000039239.15	ENSMUST00000045288.14	5116	7	83041	0	82752	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACATGTTGCTGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	186355145	186354988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_186355000_186355100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001587	chr1	-	201	2	ISM	ENSMUSG00000039239.15	ENSMUST00000195201.2	3485	8	76662	1344	76662	-1344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCTGTGTGTCCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	186361235	186357758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_186357804_186361079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001588	chr1	-	207	2	ISM	ENSMUSG00000039239.15	ENSMUST00000195201.2	3485	8	73143	6463	73143	-6463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACAGACTGGAGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	186364754	186362877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_186362985_186364654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001589	chr1	-	1128	4	ISM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	9497	-4	9497	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATCTTTTCTATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	186472058	186453170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001590	chr1	-	574	1	Genic_Genomic	ENSMUSG00000001305.6	novel	NA	NA	NA	NA	27810	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTATCTTTTCTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	186453745	186453171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_186453200_186453700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001591	chr1	-	702	4	ISM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	0	15188	0	-15188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTACAAGTAGGAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	186481555	186468362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_186468512_186469784_186469883_186471800_186472061_186481360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001592	chr1	+	1112	2	ISM	ENSMUSG00000026610.14	ENST00000463665.5	2676	5	155241	876	155241	-876	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCCAAAGGACAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	187930769	187943930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_187931043_187943091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001593	chr1	+	944	1	ISM	ENSMUSG00000026610.14	ENSMUST00000110939.8	4833	8	602637	1777	168334	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAACCAACCATCAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	187943862	187944806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_187943900_187944800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001594	chr1	-	475	3	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	39386	1991	39386	-1991	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCAGGGTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	189380897	189374793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_189375000_189378998_189379178_189380807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001595	chr1	-	744	2	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	31113	14072	31113	-14072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATTATGGAGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	189389170	189386874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_189387290_189388841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001596	chr1	-	465	2	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	25952	19140	25952	-19140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATCTTATTGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	189394331	189391942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_189392270_189394193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001597	chr1	-	464	2	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	7610	38328	7610	-38328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTCAGGAATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	189412673	189411130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_189411339_189412417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001598	chr1	-	468	3	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	2	43194	2	-43194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATAGAAAAACTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	189420281	189415996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_189416162_189417141_189417336_189420172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001599	chr1	+	410	2	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	37	71387	3	-71387	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTACAATATTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	189518905	189530878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_189519146_189530708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001600	chr1	+	339	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	11838	44970	11804	-44970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCATTTTGTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	189530706	189557295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_189530879_189554785_189554884_189557226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001601	chr1	+	462	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	56490	19720	56456	-19720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTGCGTAACCTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	189575358	189582545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_189575417_189578530_189578610_189582220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001602	chr1	+	725	3	ISM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	64443	13352	64443	-13213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGCATGTCAGAGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	189583345	189589052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_189583705_189587121_189587266_189588830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001603	chr1	+	446	3	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	68300	9481	68266	-9481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAGTGGCTTACCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	189587168	189592784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_189587266_189588830_189589050_189592654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001604	chr1	+	366	2	ISM	ENSMUSG00000026604.18	ENSMUST00000027898.7	2666	18	73784	6630	73750	-6630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCTCCCCAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	189592652	189595635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_189592784_189595400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001605	chr1	+	684	3	ISM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	76496	-2	76496	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTTATTTTTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	189595398	189602406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_189595636_189597568_189597733_189602123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001606	chr1	+	283	1	ISM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	141659	6486	83221	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTTATTTTTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	189602123	189602406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_189602100_189602400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001607	chr1	-	659	3	ISM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	38365	0	38365	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	189616195	189612688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_189613064_189614305_189614415_189616020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001608	chr1	-	941	2	ISM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	102754	26183	102754	-26183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAGGAGGGAAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	190541212	190531970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190532779_190541079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001609	chr1	+	1479	2	ISM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	15343	650	15343	-650	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTACAAGTGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	190676031	190678509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_190676138_190677136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001610	chr1	+	1384	1	ISM	ENSMUSG00000026634.17	ENSMUST00000027947.13	3562	10	20467	0	17087	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGGACAGAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	190677775	190679159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_190677800_190679200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001611	chr1	-	2073	1	ISM	ENSMUSG00000037568.13	ENSMUST00000166139.7	3897	8	29578	0	29284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCCTCTTAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	190681915	190679842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190679800_190681900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001612	chr1	-	2502	3	ISM	ENSMUSG00000037568.13	ENSMUST00000047409.9	4032	8	18523	605	18523	-605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACTTGACAGGAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	190692676	190680449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190682454_190690810_190690927_190692294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001613	chr1	-	744	9	FSM	ENSMUSG00000026632.18	ENST00000526641.5	745	9	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCCCCTGCAAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	190795038	190778366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001614	chr1	-	152	1	NIC	ENSMUSG00000026632.18	novel	1242	10	NA	NA	16521	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCCCCTGCAAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	190778518	190778366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_190778400_190778500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001615	chr1	-	192	3	ISM	ENSMUSG00000026632.18	ENST00000526997.5	692	9	7930	94	7930	-94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATTTCAGTGGAAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	190787109	190778460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190778518_190781478_190781557_190787052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001616	chr1	-	168	3	NNC	ENSMUSG00000026632.18	novel	1089	9	NA	NA	7947	-98	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGGATTTCAGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	190787092	190778464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_190778518_190781478_190781554_190787052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001617	chr1	-	196	3	ISM	ENSMUSG00000026632.18	ENST00000526997.5	692	9	7519	3112	7519	-3112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGGATGTCTGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	190787520	190781478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190781557_190787052_190787109_190787458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001618	chr1	-	153	3	NNC	ENSMUSG00000026632.18	novel	1089	9	NA	NA	7550	-3121	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCTGGTAAGCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	190787489	190781487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_190781554_190787052_190787109_190787458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001619	chr1	-	291	3	ISM	ENSMUSG00000026632.18	ENST00000530441.5	363	5	2654	-1	2654	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGCAGTTGGTCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	190792385	190787416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190787569_190788559_190788623_190792309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001620	chr1	-	155	1	NIC	ENSMUSG00000026632.18	novel	1242	10	NA	NA	7467	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGCAGTTGGTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	190787572	190787417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr1_-_190787400_190787600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001621	chr1	-	217	3	ISM	ENSMUSG00000026632.18	ENST00000526997.5	692	9	3929	9135	3929	-84	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCAGACAAGTGCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	190791110	190787501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190787569_190788559_190788623_190791023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001622	chr1	-	165	3	ISM	ENSMUSG00000026632.18	ENST00000526997.5	692	9	2696	10210	2696	-1159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGCAATCGGAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	190792343	190788576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190788623_190791023_190791109_190792309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001623	chr1	-	1305	1	ISM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	11740	0	11740	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTAGTGTGGCACTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	190903797	190902492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190902500_190903800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001624	chr1	-	1305	2	ISM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	10856	189	10856	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGAGATCTCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	190904681	190902681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_190903877_190904571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001625	chr1	-	746	4	FSM	ENSMUSG00000037499.10	ENSMUST00000046770.10	742	4	1	-5	1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGTTCTTGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	191050390	191038980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_191039287_191042115_191042220_191043656_191043718_191050115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001626	chr1	+	947	2	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	22454	389	22454	-389	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAACCCAGAAGGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	191080562	191082722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191080673_191081885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001627	chr1	+	906	1	ISM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	24097	0	24097	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGCTACCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	191082205	191083111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191082200_191083100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001628	chr1	-	296	3	ISM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	42381	1071	42381	-1071	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGCTCTAGAGAAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	191086857	191085242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_191085307_191086070_191086173_191086727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001629	chr1	+	346	3	ISM	ENSMUSG00000037461.11	ENST00000366993.7	3130	20	26486	15423	26486	-15423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAGATGACATCACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	191334361	191338330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191334475_191336918_191337054_191338232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001630	chr1	+	389	3	ISM	ENSMUSG00000037461.11	ENST00000366993.7	3130	20	32163	9666	32163	-9666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTGCAGGAGGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	191340038	191344087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191340172_191342475_191342614_191343969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001631	chr1	+	437	3	ISM	ENSMUSG00000037461.11	ENST00000366993.7	3130	20	34679	8456	34679	-8456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCGGCCGGATCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	191342554	191345297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191342614_191343969_191344177_191345126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001632	chr1	+	378	3	ISM	ENSMUSG00000037461.11	ENST00000366993.7	3130	20	39935	1860	39935	-1860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATCAGGGGGCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	191347810	191351893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191347904_191349923_191350023_191351707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001633	chr1	+	2258	2	ISM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	43958	454	43830	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTACTCTGTCACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	191351705	191355346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191351894_191353276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001634	chr1	+	2425	1	Genic_Genomic	ENSMUSG00000037461.11	novel	NA	NA	NA	NA	45501	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTTGAGTGTGAAAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	191353376	191355801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_191353400_191355800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001635	chr1	+	223	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	2	59138	2	-59138	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTAATTATACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	191451233	191451604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191451318_191451465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001636	chr1	+	365	3	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	354	22598	354	-22598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAAATGTTGTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	191451585	191488144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191451731_191481651_191481771_191488043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001637	chr1	+	296	3	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	30485	18511	30485	-18511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATAACTTGCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	191481716	191492231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191481771_191488043_191488140_191492085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001638	chr1	+	279	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	40978	14957	40978	-14957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTGTAGAACTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	191492209	191495785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191492360_191495656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001639	chr1	+	237	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	44423	2200	44423	-2200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGCCCTTCCCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	191495654	191508542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191495784_191508434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001640	chr1	+	172	2	NNC	ENSMUSG00000026623.17	novel	7233	8	NA	NA	44492	-2200	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGCCCTTCCCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	191495723	191508542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_191495788_191508434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001641	chr1	+	266	2	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	57194	98	57194	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTGACTTGGACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	191508425	191510644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191508542_191510494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001642	chr1	+	180	1	ISM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	60618	5624	59332	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGATGGATTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	191510563	191510743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191510600_191510700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001643	chr1	+	998	3	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	5762	1206	5762	-1206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGATGAGAAGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	191559317	191563956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191559482_191561503_191561630_191563248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001644	chr1	+	843	1	ISM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	10764	0	10764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGATGTTTGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	191564319	191565162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_191564300_191565200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001645	chr1	-	441	1	Genic_Genomic	ENSMUSG00000026637.15	novel	NA	NA	NA	NA	47262	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGGGCTCCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	191729606	191729165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_191729200_191729600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001646	chr1	-	469	2	ISM	ENSMUSG00000026637.15	ENSMUST00000195815.3	2214	11	42	25570	42	-25570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGCATCCGGTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	191776826	191754737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_191754936_191776555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001647	chr1	-	1049	1	ISM	ENSMUSG00000037395.17	ENSMUST00000110849.10	3791	11	38413	0	38330	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAACGAAAAAGTATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	191783894	191782845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_191782800_191783900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001648	chr1	+	1486	4	ISM	ENSMUSG00000058248.13	ENST00000640044.1	1818	7	222031	0	222031	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGATCATTTCAAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	192095346	192188429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_192095525_192100990_192101244_192117030_192117228_192187571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001649	chr1	-	555	5	NNC	ENSMUSG00000037375.17	novel	699	6	NA	NA	32459	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACCTATCCCCGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	192343801	192194472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_192194560_192196200_192196284_192235246_192235392_192277194_192277397_192343763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001650	chr1	-	577	5	ISM	ENSMUSG00000037375.17	ENST00000367009.2	699	6	4	1761	4	-1104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTCACGTGGACATTGC	NA	NA	NA	NA	NA	NA	NA	NA	192376256	192196239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001651	chr1	-	501	4	ISM	ENSMUSG00000037375.17	ENST00000367009.2	699	6	46	40758	46	-40101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAAGCCCTGCATGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	192376214	192235236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_192235392_192277194_192277397_192343763_192343800_192376106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001652	chr1	-	495	3	NNC	ENSMUSG00000037375.17	novel	699	6	NA	NA	24	-40124	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCCTGCAAGGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	192376236	192235259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_192235392_192277194_192277397_192376075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001653	chr1	-	1467	1	ISM	ENSMUSG00000016262.15	ENSMUST00000155579.8	3350	4	9802	0	5793	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTTTTTTAAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	192528262	192526795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_192526800_192528300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001654	chr1	+	540	2	FSM	ENSMUSG00000089812.3	ENST00000437764.5	543	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCAGGACTAATCTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	192537132	192539258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_192537387_192538972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001655	chr1	+	388	2	NNC	ENSMUSG00000089812.3	novel	543	2	NA	NA	-12	-69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATTTCCTTTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	192537218	192539189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_+_192537387_192538969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001656	chr1	+	391	2	FSM	ENSMUSG00000089812.3	ENSMUST00000159407.3	388	2	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAAGTCATTTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	192537229	192538556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_192537387_192538322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001657	chr1	+	296	1	Genic_Genomic	ENSMUSG00000089812.3	novel	NA	NA	NA	NA	1733	1	mono-exon	FALSE	NA	NA	NA	NA	NA	538	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGACTAATCTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	192538963	192539259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_+_192539000_192539300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001658	chr1	-	716	4	FSM	ENSMUSG00000016200.15	ENST00000481459.2	715	4	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTCGGAAGACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	192709326	192579616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_192579929_192584059_192584250_192669025_192669191_192709277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001659	chr1	-	310	1	ISM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	138155	6078	129399	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAAGTCGGAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	192579928	192579618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_192579600_192579900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001660	chr1	-	665	3	NNC	ENSMUSG00000016200.15	novel	715	4	NA	NA	40135	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAAGTCGGAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	192669192	192579618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_192579929_192584059_192584250_192669027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001661	chr1	-	504	2	NNC	ENSMUSG00000016200.15	novel	715	4	NA	NA	125078	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAAGTCGGAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	192584249	192579618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_192579929_192584055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001662	chr1	+	729	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	157	1371	157	-1369	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCCCGGATTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	192856044	192857237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_+_192856089_192856552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001663	chr1	+	699	1	ISM	ENSMUSG00000079144.8	ENSMUST00000160822.3	3793	3	7559	1529	2025	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTGAAATCATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	192857912	192858611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_192857900_192858600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001664	chr1	+	910	1	ISM	ENSMUSG00000079144.8	ENSMUST00000160822.3	3793	3	8877	0	3343	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGACAATATAAGCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	192859230	192860140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_192859200_192860100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001665	chr1	-	781	5	ISM	ENSMUSG00000016194.15	ENST00000367028.6	940	6	871	0	157	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGAGTGGTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	192923749	192904307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834_192922943_192923635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001666	chr1	-	153	1	Genic_Genomic	ENSMUSG00000009633.4	novel	NA	NA	NA	NA	905	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTATTTAATTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	192954620	192954467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr1_-_192954500_192954600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001667	chr1	-	270	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	97	504	97	-504	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCTCGGCCTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	192955428	192954972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr1_-_192955111_192955296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001668	chr1	-	593	1	ISM	ENSMUSG00000016179.12	ENST00000361322.3	2431	13	23307	0	15185	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTTGCTCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	193029246	193028653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_193028700_193029200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001669	chr1	-	1549	5	ISM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	11804	-1	11804	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTTGCTCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	193032627	193028653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_193029526_193029639_193029756_193030364_193030793_193031026_193031115_193032582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001670	chr1	+	1875	4	ISM	ENSMUSG00000016494.10	ENSMUST00000110815.9	2554	8	19542	0	19542	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTGGCCCTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	194640724	194643587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_+_194640882_194641117_194641171_194641373_194641539_194642087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001671	chr1	-	1246	2	ISM	ENSMUSG00000016481.16	ENSMUST00000193094.6	2776	10	24421	320	24400	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATCTTGGAAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	194789231	194780009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_194781150_194789125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001672	chr1	-	150	1	ISM	ENSMUSG00000016481.16	ENSMUST00000193094.6	2776	10	32538	1275	32517	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTATCAGGAGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	194781114	194780964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_194781000_194781100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001673	chr1	-	754	4	NNC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	13443	-3061	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTCTGCTCACAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	194800188	194789158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_194789231_194793387_194793464_194796945_194797150_194799786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001674	chr1	-	755	4	NNC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	2095	-10865	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTACAAATGTAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	194811536	194796962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr1_-_194797150_194799786_194800189_194805999_194806084_194811454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001675	chr1	-	764	4	ISM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	1557	13688	1319	-13688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTGACCTGAGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	194812312	194799785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr1_-_194800189_194805997_194806084_194811454_194811555_194812137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001676	chr10	+	868	1	Genic_Genomic	ENSMUSG00000040653.7	novel	NA	NA	NA	NA	97565	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTGTGTATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	3414108	3414976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_3414100_3415000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001677	chr10	+	648	3	ISM	ENSMUSG00000019762.5	ENST00000229447.9	1077	5	1	7052	1	-7052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAGCTGATGCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	3490165	3497164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_3490462_3495509_3495702_3497004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001678	chr10	+	445	3	NNC	ENSMUSG00000019762.5	novel	1077	5	NA	NA	134	-7051	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGCTGATGCAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	3490373	3497165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_3490462_3495509_3495706_3497004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001679	chr10	+	512	3	ISM	ENSMUSG00000019762.5	ENST00000229447.9	1077	5	5343	2185	5268	-2185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTGCACACCCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	3495507	3502031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_3495702_3497004_3497165_3501873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001680	chr10	+	590	3	ISM	ENSMUSG00000019762.5	ENST00000229447.9	1077	5	6838	0	6763	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTAAGGAGATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	3497002	3504216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_3497165_3501873_3502031_3503945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001681	chr10	+	288	1	NIC	ENSMUSG00000019762.5	novel	1077	5	NA	NA	13689	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCTAAGGAGATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	3503928	3504216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_3503900_3504200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001682	chr10	+	417	2	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	174890	272	174864	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACTCTTGGTTCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	4098007	4105839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_4098127_4105541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001683	chr10	+	376	1	ISM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	182618	0	182592	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAGCTAGTAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	4105735	4106111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_4105700_4106100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001684	chr10	-	2603	1	ISM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	17798	0	17798	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4319677	4317074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_4317100_4319700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001685	chr10	+	1330	3	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	6870	-753	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCCCCGCTGCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	4389489	4404387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_4389741_4400646_4400810_4403471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001686	chr10	+	938	1	ISM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	21737	0	21584	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCACTGGTTTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	4404203	4405141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_4404200_4405100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001687	chr10	-	668	1	Genic_Genomic	ENSMUSG00000019773.8	novel	NA	NA	NA	NA	5776	3	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGCAGGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5749824	5749156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_5749200_5749800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001688	chr10	-	1601	4	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	3067	-2	3067	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTGCAGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5752533	5749157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001689	chr10	-	1003	2	ISM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	3	2709	3	-2709	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTTGAGGGTGTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	5755597	5751868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_5752533_5755258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001690	chr10	-	1781	3	ISM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	8241	-6	8019	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCATTATGGTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5765669	5761880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_5763407_5764040_5764178_5765551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001691	chr10	-	995	1	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	33241	0	32936	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATCCTTGGTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	7506131	7505136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_7505100_7506100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001692	chr10	-	1111	2	ISM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	25390	656	25085	-648	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTGTTTCTCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	7513982	7505792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_7506741_7513819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001693	chr10	-	805	3	ISM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	23172	1095	23172	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATCAGCTGCTGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	7515895	7506239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_7506741_7513772_7513990_7515808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001694	chr10	+	876	6	FSM	ENSMUSG00000040034.16	ENST00000367404.8	858	6	-1	-17	-1	17	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTATCAAAATTTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	7543317	7554574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7552003_7552127_7554331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001695	chr10	+	641	4	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	12720	14250	12720	-14250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATATCACATGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7614483	7624663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_7614662_7617171_7617330_7619319_7619501_7624539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001696	chr10	+	383	3	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	22774	10253	22774	-10253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGTAATGTTTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	7624537	7628660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_7624662_7627307_7627414_7628507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001697	chr10	+	368	3	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	33719	1779	33719	-1779	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTACTTCTCTCACATTT	NA	NA	NA	NA	NA	NA	NA	NA	7635482	7637134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_7635588_7636498_7636634_7637006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001698	chr10	+	623	3	ISM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	34734	0	34734	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	7636497	7638913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_7636634_7637006_7637134_7638553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001699	chr10	+	363	1	NIC	ENSMUSG00000019794.14	novel	1775	11	NA	NA	36788	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTCAATTTAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	7638551	7638914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_7638600_7638900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001700	chr10	-	806	2	ISM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	10368	-9	10368	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7646287	7643710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_7644350_7646120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001701	chr10	+	1742	2	ISM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	21773	590	21773	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCCATTTGCAGACATA	NA	NA	NA	NA	NA	NA	NA	NA	7690427	7698309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_7690576_7696715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001702	chr10	+	1614	1	Genic_Genomic	ENSMUSG00000015757.11	novel	NA	NA	NA	NA	28632	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCATGTGTTCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	7697286	7698900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_7697300_7698900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001703	chr10	-	712	1	ISM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	49632	234	49632	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTAGGCAACAGACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	7782362	7781650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_7781600_7782400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001704	chr10	-	810	2	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	46134	964	46101	-964	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACGTCTGCTTTGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	7785893	7782614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_7783342_7785810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001705	chr10	-	808	2	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	36475	5529	36442	-5529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATTCCATTTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	7795552	7787179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_7787313_7794877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001706	chr10	-	465	1	Genic_Genomic	ENSMUSG00000019832.6	novel	NA	NA	NA	NA	12800	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTCACTTTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10421209	10420744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_10420700_10421200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001707	chr10	-	510	2	ISM	ENSMUSG00000019832.6	ENSMUST00000019974.5	2149	3	122	5744	122	-5744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCCCAGATGGACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	10433887	10426489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_10426701_10433588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001708	chr10	-	1898	3	ISM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	360448	0	360448	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATGCGTGGAGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	10595866	10564698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_10565612_10573791_10573877_10594966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001709	chr10	+	742	2	ISM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	62892	3487	62798	-3487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGTTTTGTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	11088065	11089852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_11088147_11089191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001710	chr10	+	1005	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	258	-650	183	650	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTGATTTCCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	11485224	11486229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_11485200_11486200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001711	chr10	-	361	1	ISM	ENSMUSG00000019820.12	ENSMUST00000076817.5	12382	74	478003	1184	165147	8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTACCAAGGGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	12259476	12259115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_12259100_12259500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001712	chr10	-	407	2	ISM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	361	478199	361	-477391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGATCTGGTGAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	12744748	12737322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_12737480_12744498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001713	chr10	-	1553	1	ISM	ENSMUSG00000039232.13	ENSMUST00000042861.7	4173	3	24499	2	24496	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTGTGAGTTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	12815507	12813954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_12814000_12815500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001714	chr10	-	1612	2	FSM	ENSMUSG00000039232.13	ENSMUST00000163425.9	4032	2	228	2192	228	-2192	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAATTTATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	12839775	12816147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_12817728_12839743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001715	chr10	+	923	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	2918	0	2918	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTATGGATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	12884004	12884927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_12884000_12884900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001716	chr10	-	345	1	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	14684	0	14684	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGTTTTGATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	13054228	13053883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13053900_13054200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001717	chr10	-	549	2	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	13843	511	13843	-511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAAAGTCAAATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	13055069	13054394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13054741_13054866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001718	chr10	-	351	4	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	12236	1069	12236	-1069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTGTCCACCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	13056676	13054952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13055068_13055398_13055452_13055738_13055879_13056633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001719	chr10	-	454	3	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	10640	1919	10640	-1919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGACCATTACTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	13058272	13055802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13055879_13056633_13056762_13058022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001720	chr10	-	428	3	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	7703	4139	7703	-4139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCCCTGGGAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	13061209	13058022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13058273_13058604_13058741_13061167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001721	chr10	-	342	3	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	2420	4777	2420	-4777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGACTTTATTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	13066492	13058660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13058741_13061167_13061256_13066318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001722	chr10	-	419	3	ISM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	25	12435	25	-12435	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTTTCTCGGCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13068887	13066318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13066490_13067851_13067984_13068771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001723	chr10	-	651	3	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	91667	389	91667	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGTAGCTGAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	13108366	13089527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13090018_13100527_13100605_13108282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001724	chr10	-	492	1	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	110014	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGTAGCTGAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	13090019	13089527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_13089500_13090000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001725	chr10	-	883	3	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	70408	32024	70408	-31161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGGTACTTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	13129625	13121162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13121312_13122745_13122940_13129085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001726	chr10	-	853	4	ISM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	32420	39947	32420	-39084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTGGGACTCAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	13167613	13129085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13129624_13137509_13137669_13142716_13142798_13167538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001727	chr10	-	122	1	ISM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	28902	0	28601	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTTAGCCATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	13399981	13399859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13399900_13400000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001728	chr10	-	168	2	ISM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	25280	759	24998	-759	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTGGAGAAATGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	13403584	13400644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13400713_13403484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001729	chr10	-	172	2	ISM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	21789	3598	21507	-3598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGAGAAGCTTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13407075	13403483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13403582_13407001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001730	chr10	-	159	2	ISM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	17520	10583	17238	-10583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTGTGCCAGTACATG	NA	NA	NA	NA	NA	NA	NA	NA	13411344	13410468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13410582_13411298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001731	chr10	-	156	2	ISM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	17057	11599	16775	-11599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCAAGTATTCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	13411807	13411484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13411520_13411686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001732	chr10	-	247	3	ISM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	10412	11808	10130	-11808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCACTGTAAGTTTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	13418452	13411693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13411812_13413174_13413219_13418367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001733	chr10	-	218	2	ISM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	209	22253	-92	-22227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTTGCAATATGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	13428674	13422112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13422226_13428569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001734	chr10	-	614	1	ISM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	221313	0	221155	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTGCACTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	13523411	13522797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13522800_13523400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001735	chr10	-	637	3	ISM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	178376	261	178218	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGGGTCAGGTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	13566348	13523058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_13523451_13529329_13529494_13566267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001736	chr10	+	610	2	ISM	ENSMUSG00000112172.2	ENSMUST00000220029.2	633	3	6836	0	6836	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATAGGTTGATGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	13753859	13754952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_13754094_13754576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001737	chr10	+	335	2	ISM	ENSMUSG00000015501.11	ENST00000367604.6	9957	10	203	84680	-85	-83903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGGGTACTCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	13841733	13942430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_13841965_13942326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001738	chr10	+	316	2	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	159431	23815	159431	-23029	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAGAAACAACCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	14002192	14003304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_14002241_14003036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001739	chr10	+	297	2	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	165642	17478	165642	-16692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACATAAGCCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	14008403	14009641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_14008543_14009483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001740	chr10	+	333	2	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	166719	11816	166719	-11030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGAGCTTGGCTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	14009480	14015303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_14009639_14015128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001741	chr10	+	503	3	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	172366	8093	172366	-7307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGGCGCTGTAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	14015127	14019026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_14015305_14017984_14018087_14018802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001742	chr10	+	310	2	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	176843	2248	176843	-1462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTTTACATCCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	14019604	14024871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_14019699_14024655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001743	chr10	+	298	1	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	184060	0	184060	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTCTAGTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	14026821	14027119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_14026800_14027100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001744	chr10	+	472	1	FSM	ENSMUSG00000071532.7	ENSMUST00000096020.7	468	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTCCAGATGGCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	14398821	14399293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_14398800_14399300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001745	chr10	-	1068	1	Genic_Genomic	ENSMUSG00000019868.17	novel	NA	NA	NA	NA	31887	1	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGGAAATCCAGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	14531565	14530497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_14530500_14531600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001746	chr10	-	1018	4	ISM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	29534	430	11682	151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGAGTGATAGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	14551770	14530928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001747	chr10	-	962	5	ISM	ENSMUSG00000019868.17	ENST00000620996.4	1095	6	2698	40	2698	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTCTAAATTAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	14560754	14531119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001748	chr10	-	675	6	ISM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	123	13175	123	-12594	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCACAGAACTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	14581181	14543673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001749	chr10	+	1821	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	8	150	-7	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATACTACTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	17598973	17601272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_17599208_17599685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001750	chr10	+	2429	1	FSM	ENSMUSG00000039910.11	ENSMUST00000219558.2	2411	1	14	-32	14	1	mono-exon	FALSE	NA	NA	NA	NA	NA	730	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTGGGGGGGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	17598994	17601423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_17599000_17601400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001751	chr10	+	1819	2	FSM	ENSMUSG00000039910.11	ENST00000536159.2	1817	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCTAAAAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17599256	17601404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_17599357_17599685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001752	chr10	-	1779	2	Antisense	novelGene_ENSMUSG00000039910.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTTGTCCCCGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	17601404	17599288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_-_17599352_17599688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001753	chr10	-	849	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTGGCTGTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	17899037	17887005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_17887565_17894586_17894654_17898814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001754	chr10	-	506	1	ISM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	11523	0	11113	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTGGCTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17887513	17887007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_17887000_17887500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001755	chr10	-	844	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220110.2	768	3	-72	-4	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGGTGGCTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17899038	17887007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_17887565_17894586_17894650_17898814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001756	chr10	-	2454	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	82	-1	70	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTCTTGGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	18421742	18415244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001757	chr10	-	1837	1	Genic_Genomic	ENSMUSG00000019853.7	novel	NA	NA	NA	NA	4554	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTCTTGGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	18417081	18415244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_18415200_18417100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001758	chr10	-	1066	1	ISM	ENSMUSG00000019850.12	ENSMUST00000019997.11	4422	9	13435	0	9988	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGCTTTCTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	18877723	18876657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_18876700_18877700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001759	chr10	+	2079	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	19467729	19485977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001760	chr10	-	2738	1	ISM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	51052	0	51010	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTCTCCTGAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	19732383	19729645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_19729600_19732400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001761	chr10	+	519	1	FSM	ENSMUSG00000111356.2	ENSMUST00000216127.2	399	1	-51	-69	-51	69	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACCAAAGAGCAAGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	20084184	20084703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_20084200_20084700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001762	chr10	+	1736	4	ISM	ENSMUSG00000019996.18	ENST00000617204.4	3928	19	105192	0	46385	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTAGGGTTCCTGTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	20151925	20157332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_20152022_20153870_20154092_20155741_20156373_20156544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001763	chr10	+	108	2	ISM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	5525	18203	-3951	-17862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCTAGTTCTAGATC	NA	NA	NA	NA	NA	NA	NA	NA	20193807	20197806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_20193858_20197748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001764	chr10	+	926	2	ISM	ENSMUSG00000037608.17	ENST00000392348.6	2602	9	1200	14513	1200	-14513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACTGAGGAGGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	20198958	20201155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_20199615_20200885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001765	chr10	+	2226	2	ISM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	27224	436	17695	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGACTGTTATCCACTGCG	NA	NA	NA	NA	NA	NA	NA	NA	20215453	20217809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_20215668_20215797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001766	chr10	+	2059	1	Genic_Genomic	ENSMUSG00000037608.17	novel	NA	NA	NA	NA	18432	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTCTGTTTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	20216190	20218249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_20216200_20218200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001767	chr10	+	195	1	Genic_Genomic	ENSMUSG00000019992.9	novel	NA	NA	NA	NA	13341	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGAGTATTTAACATT	NA	NA	NA	NA	NA	NA	NA	NA	20236856	20237051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_20236900_20237100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001768	chr10	-	1282	1	Genic_Genomic	ENSMUSG00000019982.16	novel	NA	NA	NA	NA	30245	1	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGATGTCTCTCGATTC	NA	NA	NA	NA	NA	NA	NA	NA	21002114	21000832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_21000800_21002100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001769	chr10	-	1457	3	ISM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	15781	116	15781	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTCAACAGCCAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	21016578	21000952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21002189_21015191_21015300_21016465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001770	chr10	-	490	4	ISM	ENSMUSG00000019982.16	ENST00000316528.12	3310	15	19046	1159	14575	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTCCATGGCTGAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	21017784	21001995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21002189_21015191_21015251_21016465_21016577_21017657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001771	chr10	-	351	3	ISM	ENSMUSG00000019982.16	ENST00000528774.5	2122	14	14375	1274	14375	-1274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATCAGGCGGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	21017984	21016465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21016577_21017657_21017784_21017870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001772	chr10	-	382	3	ISM	ENSMUSG00000019982.16	ENST00000528774.5	2122	14	13368	2456	13368	-2456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGCTTTGTGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	21018991	21017647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21017784_21017870_21017986_21018860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001773	chr10	-	501	3	ISM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	14544	16696	10020	-2679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTCAAGAAAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	21022339	21017870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21017986_21018860_21018992_21022084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001774	chr10	-	441	3	ISM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	12126	20910	7602	2136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGAATTGCTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	21024757	21022084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21022340_21024230_21024336_21024676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001775	chr10	-	863	6	FSM	ENSMUSG00000019982.16	ENST00000420123.6	866	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTGGGATGGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	21032356	21024220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21032238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001776	chr10	-	314	3	ISM	ENSMUSG00000019982.16	ENST00000528774.5	2122	14	1703	13217	1703	-4188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAATCATTTACCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	21030656	21028408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21028556_21028790_21028884_21030582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001777	chr10	-	288	3	ISM	ENSMUSG00000019982.16	ENST00000528774.5	2122	14	0	13597	0	-4568	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGTCCCCATAGATG	NA	NA	NA	NA	NA	NA	NA	NA	21032359	21028788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21028884_21030582_21030655_21032238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001778	chr10	-	410	3	ISM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	69	29408	-10	-6362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTAGATACTCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	21036814	21030582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_21030655_21032238_21032357_21036594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001779	chr10	+	296	3	ISM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	3	6586	3	-6583	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGTGAAATTGACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	21171939	21180522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21172076_21175076_21175143_21180428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001780	chr10	+	291	3	ISM	ENSMUSG00000019977.17	ENST00000415177.6	2558	17	3162	31809	3042	-9	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTTGCAAGCCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	21175074	21212974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21175143_21180428_21180543_21212865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001781	chr10	+	741	5	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	3156	26902	3055	4897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCCTTGTTCTGCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	21175087	21217880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001782	chr10	+	520	3	ISM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	8498	1894	8402	-1891	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTAACAAAAGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	21180434	21185214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21180543_21183483_21183679_21184997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001783	chr10	+	312	3	ISM	ENSMUSG00000019977.17	ENST00000415177.6	2558	17	8546	27052	8426	4748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCCTTCCCTTCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	21180458	21217731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21180543_21212865_21212975_21217612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001784	chr10	+	737	4	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	11552	26318	11451	5481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCGCTATGTTTCAACGC	NA	NA	NA	NA	NA	NA	NA	NA	21183483	21218464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21183679_21212865_21212975_21217612_21217879_21218297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001785	chr10	+	422	3	ISM	ENSMUSG00000019977.17	ENST00000314674.7	752	6	11558	0	11558	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCCCTACCCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21183590	21212983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21183679_21184997_21185214_21212865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001786	chr10	+	750	1	ISM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	14422	0	14326	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCATGTTATTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	21186358	21187108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21186400_21187100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001787	chr10	+	328	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	45904	23688	45803	8111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCTATTTTAGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	21217835	21221094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21217879_21218297_21218464_21220975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001788	chr10	+	394	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	46403	21475	46302	10324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTGAAGGGTTAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	21218334	21223307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21218464_21220975_21221094_21223160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001789	chr10	+	344	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	49041	19496	48940	12303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGATAATTTTAAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21220972	21225286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21221094_21223160_21223308_21225210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001790	chr10	+	300	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	51226	16882	51125	14917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACGACGTGGTACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	21223157	21227900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21223308_21225210_21225286_21227825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001791	chr10	+	295	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	55892	14139	55791	-14139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACGCGTCTGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	21227823	21230643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21227944_21228440_21228510_21230537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001792	chr10	+	306	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	58597	10051	58496	-10051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCCTGTAAGTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21230528	21234731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21230643_21234211_21234303_21234630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001793	chr10	+	305	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	62278	4106	62177	-4106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGTTTTAATGCAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	21234209	21240676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21234303_21234630_21234740_21240573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001794	chr10	+	355	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	62699	1097	62598	-1097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCTGCTGTGTCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	21234630	21243685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21234740_21240573_21240675_21243540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001795	chr10	+	860	3	ISM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	68638	-15	68537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	21240569	21244797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21240675_21243540_21243686_21244187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001796	chr10	+	328	1	ISM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	72579	13	72424	1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAAAATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	21244456	21244784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21244500_21244800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001797	chr10	+	700	4	ISM	ENSMUSG00000037542.14	ENST00000367847.2	1316	6	3514	4112	3514	-4112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGATCTCTGCCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	21256753	21267629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21256877_21258190_21258347_21264966_21265224_21267465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001798	chr10	+	1134	5	ISM	ENSMUSG00000037542.14	ENST00000367845.6	1304	6	3522	-1	3522	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACAGCTGCTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	21256761	21271742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21256877_21258190_21258347_21260534_21260685_21264966_21265224_21271286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001799	chr10	+	913	4	ISM	ENSMUSG00000037542.14	ENST00000367847.2	1316	6	5069	-1	5069	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACAGCTGCTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	21258308	21271742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21258347_21264966_21265224_21267465_21267628_21271286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001800	chr10	+	453	1	ISM	ENSMUSG00000037542.14	ENSMUST00000042699.14	2259	7	18100	742	18050	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACAGCTGCTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	21271289	21271742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_21271300_21271700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001801	chr10	-	2047	2	FSM	ENSMUSG00000097327.8	ENSMUST00000179054.8	2081	2	45	-11	45	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTTACCAAAGAGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	22025124	21988937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_21990248_22024387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001802	chr10	+	468	3	ISM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	354	3039	-44	-3039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGGATAGAGTACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	22049773	22056774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_22049866_22050191_22050310_22056516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001803	chr10	+	690	3	ISM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	7096	1799	6698	-1799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGCAGGTTGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	22056515	22058014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_22056772_22057023_22057288_22057844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001804	chr10	+	680	3	ISM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	7721	-3	7323	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22057140	22059816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_22057288_22057844_22058015_22059453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001805	chr10	+	366	1	NIC	ENSMUSG00000053219.16	novel	1579	9	NA	NA	9633	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22059450	22059816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_22059400_22059800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001806	chr10	+	1256	6	ISM	ENSMUSG00000078452.11	ENSMUST00000095795.5	1271	7	376	0	376	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22238168	22250038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001807	chr10	-	900	1	Genic_Genomic	ENSMUSG00000071359.14	novel	NA	NA	NA	NA	26671	2	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTATTCCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	22580675	22579775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_22579800_22580700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001808	chr10	-	1020	3	ISM	ENSMUSG00000071359.14	ENSMUST00000095794.4	1195	7	24063	-305	23572	305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAATATGATAGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	22583774	22580974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_22581795_22583487_22583583_22583669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001809	chr10	-	272	1	ISM	ENSMUSG00000010461.17	ENSMUST00000092665.12	5304	19	246653	15	69876	6	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAACTGTATACT	NA	NA	NA	NA	NA	NA	NA	NA	22979148	22978876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_22978900_22979100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001810	chr10	-	866	1	NIC	ENSMUSG00000010461.17	novel	5304	19	NA	NA	66835	41	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATAATTCTTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	22982189	22981323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_22981300_22982200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001811	chr10	-	898	2	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	63191	28	63191	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTAAAGTCTCTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	22985833	22981392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_22982188_22985730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001812	chr10	-	298	3	ISM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	21102	32758	21102	-32119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACGGGCTCTTATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	23027922	23014122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_23014173_23015858_23015996_23027811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001813	chr10	-	248	2	ISM	ENSMUSG00000010461.17	ENST00000452339.6	1781	15	15476	51181	15476	-51181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCCAGACGCCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	23033548	23033184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_23033294_23033409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001814	chr10	-	363	1	Genic_Genomic	ENSMUSG00000112868.2	novel	NA	NA	NA	NA	8267	3	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCAAGGGTTTTCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	23489779	23489416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_23489400_23489800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001815	chr10	-	583	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	23663172	23661080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001816	chr10	+	549	1	Genic_Genomic	ENSMUSG00000037455.17	novel	NA	NA	NA	NA	30435	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGTATTCATTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23703318	23703867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_23703300_23703900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001817	chr10	+	1222	5	ISM	ENSMUSG00000020010.8	ENSMUST00000020190.8	1811	7	101	3844	5	-3658	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATGCTTGGATACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	23727460	23741897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_23727695_23727804_23727936_23732095_23732289_23740235_23740528_23741525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001818	chr10	+	872	4	ISM	ENSMUSG00000020010.8	ENST00000427187.6	1203	6	28	3659	28	-3659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAATGCTTGGATACCTT	NA	NA	NA	NA	NA	NA	NA	NA	23727520	23741896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_23727695_23727801_23727936_23732095_23732289_23741525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001819	chr10	+	729	3	ISM	ENSMUSG00000020010.8	ENST00000427187.6	1203	6	4614	2388	4614	-2388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCCTTCAAGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	23732106	23743167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_23732289_23741525_23741897_23742991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001820	chr10	+	950	4	ISM	ENSMUSG00000020010.8	ENST00000367927.9	1538	7	4728	2388	4691	-2382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAAGGGGATACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	23732183	23743173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_23732289_23740235_23740528_23741525_23741897_23742991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001821	chr10	+	975	4	ISM	ENSMUSG00000020010.8	ENST00000367927.9	1538	7	12777	0	12740	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGACCCCACCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	23740232	23745561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_23740528_23741525_23741897_23742991_23743166_23745426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001822	chr10	+	1127	4	ISM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	32199	462	32189	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTTTCACCATATGGT	NA	NA	NA	NA	NA	NA	NA	NA	24057413	24064397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24057513_24058666_24058740_24060884_24060968_24063525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001823	chr10	+	1084	1	ISM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	38561	0	38551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCCCAAGAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	24063775	24064859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24063800_24064900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001824	chr10	+	898	1	Genic_Genomic	ENSMUSG00000019998.7	novel	NA	NA	NA	NA	39999	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTAGAATTGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	24065223	24066121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_24065200_24066100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001825	chr10	+	791	2	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	1289	786	1005	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCAGGAGAAAGAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	24472628	24473790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24472842_24473212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001826	chr10	+	774	1	ISM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	2463	0	2179	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTTGGCTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	24473802	24474576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24473800_24474600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001827	chr10	-	375	4	ISM	ENSMUSG00000019989.9	ENSMUST00000020169.9	4253	25	51387	4373	51298	-4373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGGATGAAATCACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	24660736	24652676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_24652792_24653791_24653870_24654590_24654724_24660687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001828	chr10	-	379	3	ISM	ENSMUSG00000019989.9	ENSMUST00000218044.2	1346	6	-82	9073	7	-9073	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATACCTGTGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	24712116	24702096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_24702197_24707628_24707705_24711913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001829	chr10	+	294	2	ISM	ENSMUSG00000019984.17	ENST00000368053.8	2655	20	21027	9832	21027	-9832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATTTGTTATGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	24767014	24768559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24767161_24768411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001830	chr10	+	387	2	ISM	ENSMUSG00000019984.17	ENST00000368053.8	2655	20	22429	8633	22429	-8633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCTTATTCTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	24768416	24769758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24768558_24769512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001831	chr10	+	468	3	ISM	ENSMUSG00000019984.17	ENST00000368053.8	2655	20	23535	5220	23535	-5220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCCACTACCGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	24769522	24773171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24769759_24771603_24771747_24773082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001832	chr10	+	328	2	ISM	ENSMUSG00000019984.17	ENST00000368053.8	2655	20	27106	3920	27106	-3920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGATCCTGCAAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	24773093	24774471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24773258_24774307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001833	chr10	+	398	3	ISM	ENSMUSG00000019984.17	ENST00000368053.8	2655	20	30643	97	30643	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGCATTGAAATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24776630	24778294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24776719_24777900_24778107_24778190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001834	chr10	+	350	2	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	32205	8966	32205	1338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCACTCTGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	24778192	24779729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24778372_24779558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001835	chr10	+	446	2	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	34169	6749	34169	3555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTAGACAATATCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	24780156	24781946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24780376_24781719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001836	chr10	+	372	3	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	39708	16	39708	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGTCTAACCAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	24785695	24788679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24785817_24786631_24786764_24788560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001837	chr10	+	249	1	ISM	ENSMUSG00000019984.17	ENSMUST00000092646.13	5098	30	43223	224	43119	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCCTGACTGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	24789106	24789355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_24789100_24789400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001838	chr10	-	151	2	ISM	ENSMUSG00000019987.10	ENST00000673427.1	980	4	4677	505	4677	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGTGAAGAGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	24792020	24791621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_24791678_24791925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001839	chr10	-	99	2	ISM	ENSMUSG00000019987.10	ENST00000673427.1	980	4	4376	916	4376	-914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGACGGGCTGGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	24792321	24792032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_24792063_24792252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001840	chr10	-	204	1	NIC	ENSMUSG00000039166.17	novel	2321	2	NA	NA	28795	2	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATCCAGTCCGGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	25047150	25046946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_25046900_25047200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001841	chr10	-	317	3	FSM	ENSMUSG00000039166.17	ENST00000474850.2	318	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATCCAGTCCGGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	25075943	25046947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_25047147_25073563_25073633_25075894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001842	chr10	+	622	3	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	167	52184	167	-52184	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCGATTACAACTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	25317651	25336794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25317956_25319639_25319853_25336689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001843	chr10	+	718	6	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	2182	39916	2182	-39916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGAATGAATTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	25319666	25349062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001844	chr10	+	735	5	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	29829	28699	-19368	-28699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACGTTTATACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	25347313	25360279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001845	chr10	+	445	4	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	37544	23987	-11653	-23987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCCTATTAGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	25355028	25364991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25355060_25355565_25355664_25360105_25360279_25364848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001846	chr10	+	361	3	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	42675	6807	-6522	-6807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGCAACCCAGGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	25360159	25382171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25360279_25364848_25364992_25382072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001847	chr10	+	434	4	ISM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	47362	-1	-1835	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGCCTGGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	25364846	25388979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25364992_25382072_25382172_25383674_25383756_25388870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001848	chr10	+	1337	4	ISM	ENSMUSG00000019978.17	ENST00000392427.7	3206	14	47380	214	-1829	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCGGTCGGGGGTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25364852	25399198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25364992_25383674_25383756_25388870_25388984_25398194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001849	chr10	+	1416	3	ISM	ENSMUSG00000019978.17	ENSMUST00000217929.2	3621	16	66202	-3	14778	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCACTTCTCTTTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	25383672	25399418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25383756_25388870_25388980_25398194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001850	chr10	+	1071	1	ISM	ENSMUSG00000019978.17	ENSMUST00000092645.7	4280	20	114081	0	29452	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	25398346	25399417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_25398300_25399400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001851	chr10	+	608	1	ISM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	145564	0	145564	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCCTATTTACTACTA	NA	NA	NA	NA	NA	NA	NA	NA	26794036	26794644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_26794000_26794600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001852	chr10	+	160	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	128359	259666	128359	-259445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAACAAGTTATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	28210486	28212510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28210554_28212417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001853	chr10	+	164	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	130367	241451	130367	-241230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAACGAGGTTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	28212494	28230725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28212534_28230600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001854	chr10	+	171	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	177459	130386	177459	-130165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGGCAAGGCGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	28259586	28341790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28259721_28341753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001855	chr10	+	155	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	259875	123132	259875	-122911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTATGAGGTATGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	28342002	28349044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28342057_28348943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001856	chr10	+	167	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	266841	121014	266841	-120793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACACCATGTATTTATG	NA	NA	NA	NA	NA	NA	NA	NA	28348968	28351162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28349054_28351080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001857	chr10	+	179	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	269066	112903	269066	-112682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGCTCCTATCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	28351193	28359273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28351283_28359183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001858	chr10	+	162	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	277102	103165	277102	-102944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGGGCGCGCCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	28359229	28369011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28359290_28368909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001859	chr10	+	249	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	345505	36047	345505	-35826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGGACCAACATAACT	NA	NA	NA	NA	NA	NA	NA	NA	28427632	28436129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28427753_28436000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001860	chr10	+	233	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	360398	27771	360398	-27550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATGTAAGCATCTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	28442525	28444405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28442676_28444322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001861	chr10	+	148	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	362193	26226	362193	-26005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCCAACTACATCGACG	NA	NA	NA	NA	NA	NA	NA	NA	28444320	28445950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28444411_28445892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001862	chr10	+	157	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	368685	20534	368685	-20313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCGTAGAAATGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	28450812	28451642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28450913_28451585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001863	chr10	+	207	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	369474	15682	369474	-15461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCTATCTAACCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	28451601	28456494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28451703_28456388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001864	chr10	+	146	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	374340	10551	374340	-10330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGACATCTACAACTG	NA	NA	NA	NA	NA	NA	NA	NA	28456467	28461625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28456544_28461555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001865	chr10	+	264	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	379431	10127	379431	-9906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAAGATGAATTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	28461558	28462049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28461692_28461918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001866	chr10	+	165	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	379832	9217	379832	-8996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAGGAACCATGACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	28461959	28462959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28462069_28462903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001867	chr10	+	229	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	380825	7149	380825	-6928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTAAATGAAGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	28462952	28465027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28463078_28464923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001868	chr10	+	205	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	382830	6815	382830	-6594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGCAACCTAACGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	28464957	28465361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28465056_28465254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001869	chr10	+	162	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	383188	4199	383188	-3978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGCAGGTGGAAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	28465315	28467977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28465381_28467880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001870	chr10	+	169	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	385785	3374	385785	-3153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTGTTGTGGAGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	28467912	28468802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28468045_28468765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001871	chr10	+	153	2	ISM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	386657	343	386657	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGAGTCCTCATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	28468784	28471833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28468902_28471797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001872	chr10	+	145	1	ISM	ENSMUSG00000019889.11	ENSMUST00000166468.2	6177	32	521218	1215	389906	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGCACTTTGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	28472033	28472178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28472000_28472200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001873	chr10	+	1670	3	ISM	ENSMUSG00000049109.16	ENSMUST00000060409.13	2278	5	54120	7176	7	-7176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAACAATTTTACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	28598475	28658740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28598633_28637150_28637610_28657686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001874	chr10	+	1436	3	ISM	ENSMUSG00000049109.16	ENST00000368248.4	2824	5	38892	18530	38892	-18530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCACTGTGACTACATGT	NA	NA	NA	NA	NA	NA	NA	NA	28637360	28739430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28637610_28657686_28658739_28739295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001875	chr10	+	2202	3	ISM	ENSMUSG00000049109.16	ENST00000368248.4	2824	5	59217	0	59217	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTTTTCAAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	28657685	28757960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_28658739_28739295_28739431_28756946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001876	chr10	+	1751	3	NNC	ENSMUSG00000049109.16	novel	2824	5	NA	NA	59676	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATTTTTCAAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	28658144	28757960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_28658739_28739295_28739439_28756946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001877	chr10	+	2803	4	FSM	ENSMUSG00000019883.12	ENST00000454591.6	672	4	-1	-2130	-1	-603	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCCCACCCCCTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	29198268	29222862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_29198414_29207816_29207868_29210186_29210268_29220336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001878	chr10	+	2560	1	Genic_Genomic	ENSMUSG00000019883.12	novel	NA	NA	NA	NA	22640	4	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGTGTTCTTTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	29220909	29223469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_29220900_29223500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001879	chr10	-	1940	3	FSM	ENSMUSG00000038876.13	ENST00000368314.6	1938	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTAAAGGTGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	29238039	29222109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_29223880_29230333_29230444_29237979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001880	chr10	-	1780	1	NIC	ENSMUSG00000038876.13	novel	4323	3	NA	NA	9820	2	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTAAAGGTGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	29223889	29222109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_29222100_29223900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001881	chr10	-	1836	2	NNC	ENSMUSG00000038876.13	novel	4323	3	NA	NA	3295	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTTTTTAAAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29230414	29222113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_29223880_29230344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001882	chr10	-	1876	3	NNC	ENSMUSG00000038876.13	novel	1938	3	NA	NA	23	26	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATGGGGACACTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	29238016	29222145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_29223880_29230333_29230439_29237979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001883	chr10	-	1252	2	ISM	ENSMUSG00000038876.13	ENSMUST00000162335.8	1434	3	3265	131	3265	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAGGGTAAAATGGATA	NA	NA	NA	NA	NA	NA	NA	NA	29230444	29222784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_29223880_29230287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001884	chr10	-	332	1	FSM	ENSMUSG00000069682.7	ENSMUST00000168697.4	495	1	221	-58	221	8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATAGACTTCCTATA	NA	NA	NA	NA	NA	NA	NA	NA	29575065	29574733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_29574700_29575100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001885	chr10	-	1133	1	ISM	ENSMUSG00000075266.6	ENSMUST00000216853.2	4143	2	3355	1436	3355	4	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTGTACTACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	30073133	30072000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_30072000_30073100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001886	chr10	-	1364	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	16	152	16	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGATTGTAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	30076540	30072156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_30073223_30074461_30074576_30076356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001887	chr10	-	1347	4	ISM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	41513	-1	41513	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTATTTGATTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	30435232	30410219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001888	chr10	-	815	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	60	0	60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGTCTTCAGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	30494415	30484136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001889	chr10	-	695	2	ISM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	99142	0	99085	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	31222708	31208372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_31208966_31222606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001890	chr10	-	409	1	FSM	ENSMUSG00000110960.2	ENSMUST00000214434.2	351	1	293	-351	293	351	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAGTTCTGTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	31289868	31289459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_31289500_31289900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001891	chr10	+	724	4	FSM	ENSMUSG00000039552.15	ENST00000368580.4	723	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAATACAAAACTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	33784062	33790557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_33784298_33787501_33787647_33788957_33789076_33790331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001892	chr10	+	253	1	NIC	ENSMUSG00000039552.15	novel	3650	6	NA	NA	6255	14	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCCAACCTTTTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	33790317	33790570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_33790300_33790600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001893	chr10	-	223	2	ISM	ENSMUSG00000039531.9	ENST00000368576.8	1689	8	21382	92	21382	-92	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACAACTTCGGAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	33804100	33803487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_33803618_33804007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001894	chr10	-	226	2	ISM	ENSMUSG00000039531.9	ENST00000368576.8	1689	8	19515	689	19515	-689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTCTTCAGAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	33805967	33804084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_33804160_33805816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001895	chr10	-	934	4	FSM	ENSMUSG00000039531.9	ENST00000368573.5	959	4	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGTGACTGCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	33825457	33806172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_33806341_33816153_33816276_33819645_33819757_33824924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001896	chr10	-	529	2	ISM	ENSMUSG00000039531.9	ENST00000368573.5	959	4	149	13464	149	-13464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAGAAATATTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	33825333	33819636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_33819757_33824924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001897	chr10	-	816	4	ISM	ENSMUSG00000019782.11	ENST00000487832.6	1236	8	16924	-1	16924	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTACGAGAAGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	33878566	33872371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001898	chr10	-	482	4	ISM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	7480	5102	7350	-5102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGTGCCCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	33888140	33877652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_33877787_33878419_33878564_33884988_33885120_33888067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001899	chr10	-	503	4	ISM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	1	5965	1	-5965	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTCAAGAAAAGTTAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	33895619	33878515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_33878564_33884988_33885120_33888067_33888134_33895361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001900	chr10	-	362	1	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	33873	0	33873	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTTAGCACAGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	34026284	34025922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_34025900_34026300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001901	chr10	-	1079	1	NIC	ENSMUSG00000039497.9	novel	4708	6	NA	NA	31690	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTCCTGCTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34028467	34027388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_34027400_34028500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001902	chr10	-	604	2	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	31625	1494	31625	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTGCTAAATAAACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	34028532	34027416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_34027707_34028218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001903	chr10	-	856	2	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	28042	3403	28042	471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTGGATGTCCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34032115	34029325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_34029971_34031904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001904	chr10	-	443	2	ISM	ENSMUSG00000039497.9	ENST00000647244.1	899	3	21171	-13	21170	13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGACTGGATCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	34038987	34029783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_34029971_34038731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001905	chr10	-	177	1	NIC	ENSMUSG00000039497.9	novel	4708	6	NA	NA	30184	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCATAGAAACAAATATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34029973	34029796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_34029800_34030000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001906	chr10	-	709	3	ISM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	21171	5976	21171	-2102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGAGCTGGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34038986	34031898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_34032113_34035964_34036205_34038731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001907	chr10	-	573	2	ISM	ENSMUSG00000039497.9	ENST00000647244.1	899	3	154	8933	153	-8933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATGTTATCCTAACACA	NA	NA	NA	NA	NA	NA	NA	NA	34060004	34038729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_34038986_34059687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001908	chr10	-	1098	2	ISM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	9	32297	9	-29889	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTTGTCTTTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34083702	34059685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_34060157_34083075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001909	chr10	+	2624	1	FSM	ENSMUSG00000047514.7	ENSMUST00000061372.7	3086	1	466	-4	466	4	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTAACTTTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	34158651	34161275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_34158700_34161300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001910	chr10	-	2204	1	ISM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	3342	0	3342	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATCGTGTTATTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	37011574	37009370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_37009400_37011600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001911	chr10	-	2325	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	87	1636	87	-1636	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGATGCAATGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37014829	37011006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_37012932_37014429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001912	chr10	+	1175	4	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	101	13136	101	-13136	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTACTCGATTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	39501944	39517390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_39502656_39510530_39510727_39515215_39515395_39517301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001913	chr10	+	101	2	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	15514	8755	15514	-8755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGTATGTTCCAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	39517357	39521771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_39517391_39521703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001914	chr10	+	98	2	ISM	ENSMUSG00000019842.7	ENST00000392556.8	1685	8	19859	7654	19859	-7654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCCAAATACAAACAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	39521702	39522872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_39521773_39522844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001915	chr10	+	107	2	ISM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	21048	3588	21048	-3588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATTCATCCCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	39522891	39526938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_39522962_39526901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001916	chr10	+	97	1	ISM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	41500	777	28586	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCACTCCAGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	39530429	39530526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_39530400_39530500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001917	chr10	-	391	2	ISM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	21595	248	21561	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTCCTGATAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	40101437	40099670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_40099917_40101292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001918	chr10	-	407	1	ISM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	7916	1646	7916	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTGGATTCGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	40125751	40125344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_40125300_40125800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001919	chr10	-	512	3	ISM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	3366	131	3361	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCCGTGTTATTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	40130306	40125476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_40125828_40127151_40127266_40130259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001920	chr10	-	1008	1	Genic_Genomic	ENSMUSG00000075232.7	novel	NA	NA	NA	NA	13725	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTTTGGTGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	40164457	40163449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_40163400_40164500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001921	chr10	-	1096	2	ISM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	11913	1072	11913	-1072	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATGACAAAACTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	40166269	40164525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_40165466_40166113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001922	chr10	+	265	2	ISM	ENSMUSG00000019831.15	ENST00000392588.5	3106	11	423	53693	114	-53693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACTTTAATTCGACTC	NA	NA	NA	NA	NA	NA	NA	NA	40759936	40760868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40760067_40760733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001923	chr10	+	265	2	ISM	ENSMUSG00000019831.15	ENST00000392588.5	3106	11	1223	18188	914	-18188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAATATAATTAGACAACT	NA	NA	NA	NA	NA	NA	NA	NA	40760736	40796373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40760872_40796243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001924	chr10	+	256	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	36428	11985	36428	-11980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACACAGCTTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	40796250	40802581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40796405_40802479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001925	chr10	+	268	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	42668	7796	42668	-7791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTACAGGTCAGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	40802490	40806770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40802615_40806626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001926	chr10	+	262	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	46805	6546	46805	-6541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGAAGGTATTGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	40806627	40808020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40806781_40807911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001927	chr10	+	256	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	48086	5323	48086	-5318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGCCAATGGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	40807908	40809243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40808030_40809108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001928	chr10	+	312	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	49310	3931	49310	-3926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCACCTGTATCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	40809132	40810635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40809282_40810472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001929	chr10	+	281	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	50666	2344	50666	-2339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCACTAAGAGCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	40810488	40812222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40810653_40812105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001930	chr10	+	244	2	ISM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	52802	791	52802	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGACTGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	40812624	40813775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40812735_40813641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001931	chr10	+	259	2	ISM	ENSMUSG00000019831.15	ENST00000392588.5	3106	11	54170	564	53861	-564	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTATGAAAAGTATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	40813683	40813997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40813810_40813864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001932	chr10	+	157	1	ISM	ENSMUSG00000019831.15	ENSMUST00000019975.14	2609	9	54934	4	54582	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTTGGGTGTCGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	40814404	40814561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_40814400_40814600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001933	chr10	-	316	1	ISM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	114773	0	114599	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	41064483	41064167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41064200_41064500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001934	chr10	-	172	1	ISM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	114561	356	114387	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGAGACGGCCTCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	41064695	41064523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41064500_41064700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001935	chr10	-	344	3	ISM	ENSMUSG00000038417.5	ENST00000415980.2	1547	13	76080	0	76080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGAGACGGCCTCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	41103002	41064523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41064696_41096894_41096982_41102917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001936	chr10	-	367	3	ISM	ENSMUSG00000038417.5	ENST00000415980.2	1547	13	74783	32371	74783	7108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACTATAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41104299	41096894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41096982_41102917_41103001_41104102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001937	chr10	-	263	1	NIC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	74818	1	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACCCAACTCACACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41104264	41104001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_41104000_41104300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001938	chr10	-	466	3	ISM	ENSMUSG00000038417.5	ENST00000675714.1	2510	20	70827	67	70827	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCTCTGGAAAATGATC	NA	NA	NA	NA	NA	NA	NA	NA	41108255	41104069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41104299_41106002_41106087_41108102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001939	chr10	-	282	3	ISM	ENSMUSG00000038417.5	ENST00000675714.1	2510	20	69474	2011	69474	-2011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACTGGGGTAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	41109608	41106013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41106087_41108102_41108251_41109547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001940	chr10	-	328	3	ISM	ENSMUSG00000038417.5	ENST00000675714.1	2510	20	62441	4120	62441	-4120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGACAAGTTCAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	41116641	41108122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41108251_41109547_41109607_41116500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001941	chr10	-	369	3	ISM	ENSMUSG00000038417.5	ENST00000675714.1	2510	20	51199	5545	51199	-5545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACCTGCCTCGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41127883	41109547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41109607_41116500_41116640_41127712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001942	chr10	-	362	3	ISM	ENSMUSG00000038417.5	ENST00000675681.1	1786	15	48197	2	48197	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACCAGCAGTGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	41130885	41127712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41127880_41129635_41129785_41130839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001943	chr10	-	451	4	ISM	ENSMUSG00000038417.5	ENST00000675681.1	1786	15	44935	1923	44935	-1923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTATCTGCTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	41134147	41129633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41129785_41130839_41130886_41132416_41132534_41134010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001944	chr10	-	231	3	ISM	ENSMUSG00000038417.5	ENST00000415980.2	1547	13	10	66338	10	-3151	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCCACTGGTCGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	41179072	41130861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41130886_41132416_41132534_41178982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001945	chr10	-	397	3	ISM	ENSMUSG00000038417.5	ENST00000675681.1	1786	15	39037	6300	39037	5858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAGAGCAGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	41140045	41134010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41134140_41139059_41139163_41139880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001946	chr10	-	755	6	ISM	ENSMUSG00000038417.5	ENST00000368941.2	855	7	17387	0	17387	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCGGGAGTTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	41161695	41139868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41140044_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001947	chr10	-	395	3	ISM	ENSMUSG00000038417.5	ENST00000675681.1	1786	15	35270	12169	35270	-11	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGGCCAGCCTGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	41143812	41139879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41140044_41141381_41141483_41143682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001948	chr10	-	355	3	ISM	ENSMUSG00000038417.5	ENST00000675681.1	1786	15	32637	13697	32637	-1539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCAAGAGAGGCGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	41146445	41141407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41141483_41143682_41143812_41146294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001949	chr10	-	312	3	NNC	ENSMUSG00000038417.5	novel	855	7	NA	NA	17455	-13481	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGGTATTGGCAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	41161627	41153349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_41153511_41161289_41161410_41161596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001950	chr10	-	295	3	ISM	ENSMUSG00000038417.5	ENST00000368941.2	855	7	14	21431	14	-21431	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAGTCGTAGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	41179068	41161299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41161410_41161596_41161696_41178982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001951	chr10	+	205	1	ISM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	14987	0	14935	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATACTTGATCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	41341365	41341570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_41341400_41341600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001952	chr10	-	567	2	ISM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	2513	0	2513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	41363823	41363167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41363579_41363667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001953	chr10	+	481	3	ISM	ENSMUSG00000078451.6	ENST00000424445.6	628	4	1	242	1	-242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAATTTTGCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	41366388	41377683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_41366618_41374357_41374547_41377620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001954	chr10	+	403	3	ISM	ENSMUSG00000078451.6	ENST00000424445.6	628	4	7968	-3	7921	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGCTGAAAACTAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	41374355	41377928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_41374547_41377620_41377684_41377779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001955	chr10	+	388	3	NNC	ENSMUSG00000078451.6	novel	628	4	NA	NA	7921	-16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATACAAGGAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	41374355	41377909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_41374551_41377620_41377684_41377779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001956	chr10	+	162	1	NIC	ENSMUSG00000078451.6	novel	1068	8	NA	NA	11332	3	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGCTGAAAACTAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	41377766	41377928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_41377800_41377900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001957	chr10	+	2261	5	ISM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	2501	377	2501	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCCTGAAATTTTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	41397910	41406667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001958	chr10	+	2040	1	Genic_Genomic	ENSMUSG00000019818.16	novel	NA	NA	NA	NA	9596	1	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATATTTTGATTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	41405005	41407045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_41405000_41407000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001959	chr10	-	1316	3	ISM	ENSMUSG00000019813.17	ENSMUST00000105505.10	2071	9	22944	1	22936	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41598983	41594836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41595904_41597552_41597698_41598879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001960	chr10	-	679	5	ISM	ENSMUSG00000019813.17	ENST00000359793.7	1380	9	14805	1898	14805	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCCCCGTTACCAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	41607114	41597542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_41597698_41598879_41599119_41604623_41604711_41605326_41605405_41606994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001961	chr10	-	795	6	FSM	ENSMUSG00000019813.17	ENST00000521277.5	795	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGCATCCTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	41685720	41605326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621961_41685568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001962	chr10	+	1005	2	ISM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	18896	294	18896	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGAAAATGTGGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	41782330	41784126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_41782477_41783267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001963	chr10	+	869	1	ISM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	97621	0	20117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	41783551	41784420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_41783600_41784400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001964	chr10	-	1136	3	FSM	ENSMUSG00000071324.12	ENSMUST00000162405.8	1135	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAATCCTGAGTCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	41894377	41875803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_41876495_41887763_41888020_41894188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001965	chr10	-	620	1	ISM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	165361	0	165361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	42189200	42188580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_42188600_42189200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001966	chr10	-	632	2	ISM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	162122	494	162122	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAACTGAAGGGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	42192439	42189074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_42189613_42192345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001967	chr10	+	1407	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	-5	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTCTGGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	42378021	42411367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001968	chr10	+	1394	4	NNC	ENSMUSG00000019804.13	novel	1401	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	42378026	42411366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_42378489_42401949_42402046_42409151_42409270_42410648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001969	chr10	+	631	1	ISM	ENSMUSG00000019804.13	ENSMUST00000105499.2	1057	3	32461	0	32461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGCACGGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	42410746	42411377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_42410700_42411400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001970	chr10	+	276	2	ISM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	321	19185	321	-15049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTCCATCTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	42555232	42559270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_42555394_42559155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001971	chr10	+	307	2	ISM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	17332	4215	17332	-79	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGCAAAAGAAACGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	42572243	42574240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_42572414_42574103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001972	chr10	+	326	2	ISM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	19219	1790	19219	-1790	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGAATAAGGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	42574130	42576665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_42574270_42576478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001973	chr10	+	279	1	Genic_Genomic	ENSMUSG00000038280.13	novel	NA	NA	NA	NA	23267	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTTGTAATTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	42578178	42578457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_42578200_42578500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001974	chr10	-	154	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGACTGGGCATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	43332242	43332088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr10_-_43332100_43332200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001975	chr10	+	567	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	-4	0	-4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	43400075	43400642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_43400100_43400600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001976	chr10	+	403	2	FSM	ENSMUSG00000045886.8	ENSMUST00000216543.2	456	2	12	41	12	-41	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGCGTGTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43400113	43400600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_43400172_43400255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001977	chr10	-	1096	4	FSM	ENSMUSG00000019797.12	ENST00000405204.6	1086	4	0	-10	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCGGAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	43416691	43401128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_43401405_43406593_43406667_43408671_43409143_43416415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001978	chr10	-	1043	4	NNC	ENSMUSG00000019797.12	novel	1086	4	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTATGGGGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	43416652	43401138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_43401405_43406593_43406659_43408667_43409143_43416415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001979	chr10	-	810	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	2	48	2	-38	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAAAAAGAGGACGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	43416962	43401176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001980	chr10	+	1819	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	-1	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTGTTGAATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	43455163	43460263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_43455319_43458599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001981	chr10	+	591	2	FSM	ENSMUSG00000047139.10	ENST00000620405.1	590	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGAACGTTTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	43455163	43459323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_43455319_43458887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001982	chr10	+	1664	1	NIC	ENSMUSG00000047139.10	novel	1816	2	NA	NA	2667	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	43458597	43460261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_43458600_43460300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001983	chr10	-	361	2	ISM	ENSMUSG00000019863.8	ENST00000400977.3	1474	10	19503	0	19503	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCGTTGGTTCTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43752661	43750535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_43750703_43752467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001984	chr10	-	170	1	NIC	ENSMUSG00000019863.8	novel	1981	11	NA	NA	21459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCGTTGGTTCTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43750705	43750535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_43750500_43750700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001985	chr10	-	314	2	ISM	ENSMUSG00000019863.8	ENST00000400977.3	1474	10	13907	6933	13907	-6933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACAATTGCTTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	43758257	43757468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_43757587_43758061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001986	chr10	-	288	2	ISM	ENSMUSG00000019863.8	ENST00000400977.3	1474	10	11327	7524	11327	-7524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGCTGCTGTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	43760837	43758059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_43758255_43760744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001987	chr10	-	200	2	ISM	ENSMUSG00000019863.8	ENST00000400977.3	1474	10	634	19973	634	-19973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAATGAAAATTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	43771530	43770508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_43770608_43771429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001988	chr10	+	1893	6	FSM	ENSMUSG00000038160.8	ENST00000636437.1	1905	6	13	-1	13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATCTCAGCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44162039	44370104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_44162194_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44368820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001989	chr10	+	1744	4	ISM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	35222	-5	17549	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTGGCTCAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	44179575	44240292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_44179726_44195455_44195551_44222952_44223071_44238911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001990	chr10	-	436	1	Genic_Genomic	ENSMUSG00000038151.14	novel	NA	NA	NA	NA	9446	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTCTAGTGTCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44313600	44313164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_44313200_44313600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001991	chr10	-	756	2	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	9030	0	9030	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTAGTGTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	44314016	44313165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_44313601_44313695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001992	chr10	-	890	3	ISM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	5613	2691	5613	-194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTCAGAAAAGAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	44317433	44315856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_44316239_44316654_44316784_44317054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001993	chr10	-	756	3	ISM	ENSMUSG00000038151.14	ENSMUST00000218369.2	2517	7	7034	2053	-3126	-2053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGACTCCTACTCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	44326172	44317715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_44318161_44322787_44323041_44326114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001994	chr10	-	465	3	ISM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	122	11826	122	-10452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAGAAAACCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44334561	44326114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_44326235_44332620_44332867_44334462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001995	chr10	+	1604	3	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	85852	7652	85852	-7652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGACACAGAAACTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	45029150	45035642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45029283_45031611_45031769_45034327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001996	chr10	+	1318	1	ISM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	98678	0	98678	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATTTTTACTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	45041976	45043294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45042000_45043300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001997	chr10	+	775	2	ISM	ENSMUSG00000019848.15	ENSMUST00000161803.2	1369	4	-99	3055	-2	-3055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTCGTTCACATCGCG	NA	NA	NA	NA	NA	NA	NA	NA	45165398	45191158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45165672_45190656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001998	chr10	+	917	3	ISM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	25573	348	25476	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAAATTTTCACGTA	NA	NA	NA	NA	NA	NA	NA	NA	45190973	45194200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45191376_45192526_45192636_45193794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000001999	chr10	+	448	2	NNC	ENSMUSG00000019848.15	novel	1853	4	NA	NA	25544	-1577	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGACCAATTATGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	45191041	45192636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_45191380_45192526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002000	chr10	+	435	3	NNC	ENSMUSG00000019848.15	novel	1853	4	NA	NA	25586	-383	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTGGAGGAGAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	45191083	45193830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_45191380_45192532_45192636_45193794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002001	chr10	+	433	1	Genic_Genomic	ENSMUSG00000019848.15	novel	NA	NA	NA	NA	28619	1	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGATGACTTTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45194116	45194549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_45194100_45194500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002002	chr10	+	541	3	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	3457	26165	3457	-26165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTATGTGGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	45215324	45222410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45215553_45219129_45219255_45222222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002003	chr10	+	426	3	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	7260	24584	7260	-24584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTTGGCTTTGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	45219127	45223991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45219255_45222222_45222411_45223880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002004	chr10	+	435	3	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	10366	18581	10366	-18581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACTTTAAATGATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45222233	45229994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45222411_45223880_45223990_45229845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002005	chr10	+	421	3	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	12011	17587	12011	-17587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCCCACAGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45223878	45230988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45223990_45229845_45230014_45230846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002006	chr10	+	651	3	ISM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	18044	2882	18044	-2882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCATCTCTGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	45229911	45245693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_45230014_45230846_45230989_45245286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002007	chr10	+	446	1	Genic_Genomic	ENSMUSG00000071317.5	novel	NA	NA	NA	NA	36269	7	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTTTTCTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	45248136	45248582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_45248100_45248600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002008	chr10	+	806	1	FSM	ENSMUSG00000110841.2	ENSMUST00000217344.2	782	1	-3	-21	-3	21	mono-exon	FALSE	NA	NA	NA	NA	NA	896	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTGAAACTTGGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	45751397	45752203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_45751400_45752200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002009	chr10	-	244	1	FSM	ENSMUSG00000111202.2	ENSMUST00000213811.2	287	1	44	-1	44	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAAAGAAAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	50301382	50301138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_50301100_50301400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002010	chr10	+	1640	3	FSM	ENSMUSG00000049641.16	ENSMUST00000163017.10	1650	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTTTTTTCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	51898607	51904567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_51898900_51901152_51901460_51903526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002011	chr10	+	1042	3	FSM	ENSMUSG00000049641.16	ENST00000352536.7	1039	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGTGGCGGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	51898746	51905766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_51898900_51901152_51901460_51905184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002012	chr10	+	817	2	NNC	ENSMUSG00000049641.16	novel	1039	3	NA	NA	2481	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGTGGCGGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	51901228	51905766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_51901464_51905184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002013	chr10	-	389	1	FSM	ENSMUSG00000112550.2	ENSMUST00000218299.2	2386	1	779	1218	779	-1218	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCAGGCTCCAAGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	52218974	52218585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_52218600_52219000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002014	chr10	+	765	2	ISM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	15811	2929	15811	-2929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTCTGGTGTCTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	52309453	52313350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_52309541_52312672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002015	chr10	+	744	1	ISM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	21893	0	21893	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTAGAATTTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52315535	52316279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_52315500_52316300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002016	chr10	+	209	2	ISM	ENSMUSG00000019857.8	ENSMUST00000219271.2	725	5	447	5451	252	-5451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAGATTAATCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	53473299	53478557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_53473395_53478443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002017	chr10	+	210	2	ISM	ENSMUSG00000019857.8	ENSMUST00000219282.2	1150	4	4594	1967	4594	-1707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGCTACTATGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	53478446	53482301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_53478560_53482204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002018	chr10	+	275	2	ISM	ENSMUSG00000019857.8	ENSMUST00000219282.2	1150	4	8384	378	8384	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACCGTCAGCGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	53482236	53483890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_53482382_53483760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002019	chr10	+	138	1	ISM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	12136	0	11331	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTTTGTCTAACTACA	NA	NA	NA	NA	NA	NA	NA	NA	53485183	53485321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_53485200_53485300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002020	chr10	+	1122	1	ISM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	8842	0	8842	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAAGCTTCTCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	55991854	55992976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_55991900_55993000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002021	chr10	+	889	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	8	2174	8	-2166	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGGGCGTTAAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	56253433	56264337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_56253615_56263629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002022	chr10	+	2053	1	Genic_Genomic	ENSMUSG00000050953.11	novel	NA	NA	NA	NA	9278	3	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAACCTGCATGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	56264461	56266514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_56264500_56266500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002023	chr10	+	351	1	FSM	ENSMUSG00000112825.2	ENSMUST00000219246.2	754	1	720	-317	720	317	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTGGTGATGGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	56374156	56374507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_56374200_56374500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002024	chr10	+	469	2	ISM	ENSMUSG00000019878.9	ENSMUST00000220042.2	2430	14	25049	548	25049	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTTGCTTTTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	57387569	57388412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_57387625_57387998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002025	chr10	+	412	1	Genic_Genomic	ENSMUSG00000019878.9	novel	NA	NA	NA	NA	26304	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCTCATTGTTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	57388824	57389236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_57388800_57389200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002026	chr10	-	335	1	Genic_Genomic	ENSMUSG00000019877.11	novel	NA	NA	NA	NA	16423	1	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTGGTAGCATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	57392203	57391868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_57391900_57392200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002027	chr10	-	479	2	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	12935	1273	12935	-1273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTGCATGAAATAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	57395691	57393142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_57393389_57395458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002028	chr10	-	646	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	9311	3583	9311	-3583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATAACTTCAGATAATTC	NA	NA	NA	NA	NA	NA	NA	NA	57399315	57395452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_57395690_57395793_57395939_57399051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002029	chr10	-	480	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	8130	7182	8130	-7182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTTATTTATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	57400496	57399051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_57399313_57400056_57400195_57400415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002030	chr10	-	390	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	7034	8187	7034	-8187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTTTGTTTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57401592	57400056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_57400195_57400415_57400496_57401420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002031	chr10	-	413	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	4703	8546	4703	-8546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGCGCTTTTAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	57403923	57400415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_57400496_57401420_57401591_57403760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002032	chr10	-	383	3	ISM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	3	9671	3	-9671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGCTACAAAGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	57408623	57401540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_57401591_57403760_57403923_57408452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002033	chr10	+	966	1	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	49137	0	49095	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGACTACTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	58140455	58141421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58140500_58141400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002034	chr10	+	838	4	ISM	ENSMUSG00000019920.19	ENSMUST00000105468.2	1205	10	19602	-512	19602	307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACATAAGCTTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	58249811	58257912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58249888_58252455_58252505_58254220_58254297_58257275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002035	chr10	+	651	1	ISM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	100575	0	29653	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTACATATCATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	58259862	58260513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58259900_58260500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002036	chr10	+	134	2	ISM	ENSMUSG00000003226.8	ENST00000629728.1	156	3	3	2540	3	-2540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAAGTACCAAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	58282804	58287870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58282874_58287805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002037	chr10	+	162	2	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	1380	26147	1380	84	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGAGCAGCCAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	58289183	58290494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58289246_58290394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002038	chr10	+	172	2	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	2727	25446	2727	785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCATGAGGCAGACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	58290530	58291195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58290548_58291040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002039	chr10	+	205	2	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	12460	15637	12460	10594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGATCCTCTGTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	58300263	58301004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58300351_58300886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002040	chr10	+	196	2	NNC	ENSMUSG00000003226.8	novel	4518	17	NA	NA	15205	12885	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACATTTAGTTTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58303008	58303295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_58303121_58303211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002041	chr10	+	170	2	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	18704	5483	18704	-5483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTAACAAAGGAAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	58306507	58311158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58306585_58311065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002042	chr10	+	1095	2	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	23260	1232	23260	-1232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGACACCACAGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	58311063	58315409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58311161_58314411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002043	chr10	+	1358	1	NIC	ENSMUSG00000003226.8	novel	9608	29	NA	NA	27481	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACTTAGTATTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	58315284	58316642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_58315300_58316600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002044	chr10	+	479	4	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	11578	48816	11578	-48816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGAGAATGAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	58345369	58363219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58345455_58348900_58349080_58359959_58360119_58363163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002045	chr10	+	1022	4	ISM	ENSMUSG00000038010.10	ENST00000412964.6	2221	14	42826	-8	42826	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTATCATTTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	58376617	58412043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58376737_58380738_58380932_58397722_58397900_58411510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002046	chr10	+	481	3	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	46976	2485	46976	-2485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAAGCCCTTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58380767	58409550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58380932_58397722_58397900_58409410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002047	chr10	+	789	3	ISM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	63929	54	63929	-54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTCTTCTTGAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	58397720	58411981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58397900_58409410_58409550_58411510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002048	chr10	+	477	1	ISM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	77797	23	77775	8	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTATCATTTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	58411566	58412043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_58411600_58412000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002049	chr10	+	1205	2	ISM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	46217	142	46217	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTCGGGGAATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59205406	59207931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59205506_59206825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002050	chr10	+	2053	1	ISM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	47956	0	47884	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTATGTACAACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	59207073	59209126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59207100_59209100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002051	chr10	-	1141	7	FSM	ENSMUSG00000009654.5	ENST00000622652.1	1166	7	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTTCACTTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	59274711	59259757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_59259935_59261198_59261299_59265312_59265474_59266714_59266838_59271688_59271812_59273531_59273640_59274362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002052	chr10	-	157	1	ISM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	169552	0	11020	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCATCTCGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59282962	59282805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_59282800_59283000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002053	chr10	-	2290	4	ISM	ENSMUSG00000009647.14	ENSMUST00000009791.7	1079	5	1418	-1613	1418	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCATCTCGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	59292564	59282805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002054	chr10	-	148	2	ISM	ENSMUSG00000009647.14	ENST00000536019.5	3106	8	149656	9790	-8407	-8179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGTGAAGACCCTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	59302389	59292597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_59292632_59302275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002055	chr10	-	236	2	ISM	ENSMUSG00000009647.14	ENST00000536019.5	3106	8	148467	19468	-9596	-17857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAGCTGCTTTAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	59303578	59302275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_59302381_59303447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002056	chr10	-	156	2	ISM	ENSMUSG00000009647.14	ENST00000536019.5	3106	8	125067	20725	-32996	-19114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTCTGACTCAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	59326978	59303532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_59303619_59326908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002057	chr10	+	549	3	ISM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	1	130973	1	-130964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAACAGAGTTTTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	59538299	59568981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59538510_59563778_59563941_59568804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002058	chr10	+	451	3	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	25378	123301	25378	-123301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGCTAGCGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59563827	59576644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59563941_59568804_59568980_59576481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002059	chr10	+	376	3	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	30360	113577	30360	-113577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGCAGACTGGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	59568809	59586368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59568980_59576481_59576645_59586325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002060	chr10	+	322	3	ISM	ENSMUSG00000020111.16	ENSMUST00000179709.8	1814	13	38042	95878	38032	-95871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCATCTTCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	59576481	59604074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59576645_59586325_59586370_59603959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002061	chr10	+	402	3	NNC	ENSMUSG00000020111.16	novel	2442	12	NA	NA	65508	-75047	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTCGCCTGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	59603957	59624898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_59604075_59623762_59623850_59624700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002062	chr10	+	407	3	NNC	ENSMUSG00000020111.16	novel	2442	12	NA	NA	85330	-36796	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTGCCTCGGATACAGG	NA	NA	NA	NA	NA	NA	NA	NA	59623779	59663149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_59623850_59624700_59624899_59663010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002063	chr10	+	424	3	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	86264	24348	86264	-24348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAAGGTACTGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	59624713	59675597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59624899_59663010_59663149_59675496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002064	chr10	+	648	4	ISM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	124621	574	124621	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTAGAGACCTTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	59663070	59699371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59663149_59675496_59675606_59697384_59697475_59699000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002065	chr10	+	388	1	ISM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	161268	0	161117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTGTGTCCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	59699566	59699954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59699600_59700000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002066	chr10	+	339	2	ISM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	11219	3914	11211	-3914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACAGCCAGTTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	59726658	59728683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59726808_59728493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002067	chr10	+	353	3	ISM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	13072	2440	13064	-2440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGTGAGTGCACGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	59728511	59730157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59728680_59728759_59728840_59730052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002068	chr10	+	374	2	ISM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	16771	1588	16720	-813	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTCCGCATCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	59732167	59733530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59732324_59733312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002069	chr10	+	1816	1	NIC	ENSMUSG00000020109.14	novel	3041	9	NA	NA	17861	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGGTCTGCATTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	59733308	59735124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_59733300_59735100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002070	chr10	-	482	1	ISM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	1684	0	1684	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCATCGGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	59785972	59785490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_59785500_59786000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002071	chr10	-	500	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	61	1194	61	-1194	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGGTGGGCAAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	59787595	59786684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_59786852_59787138_59787395_59787518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002072	chr10	-	1432	1	Genic_Genomic	ENSMUSG00000020107.11	novel	NA	NA	NA	NA	13930	1	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGAGTTGAAACTATTT	NA	NA	NA	NA	NA	NA	NA	NA	59824661	59823229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_59823200_59824700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002073	chr10	-	1582	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	116	154	-24	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACTGCACAATTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	59838841	59823384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002074	chr10	-	435	3	FSM	ENSMUSG00000020107.11	ENSMUST00000182912.2	566	3	59	72	-32	35	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGCAGCACTTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	59838849	59824372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_59824661_59826654_59826730_59838777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002075	chr10	+	632	5	ISM	ENSMUSG00000044475.15	ENST00000672940.1	771	6	-2	33825	-2	-33825	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTATGATGTCGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	59848276	59900230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59848382_59849417_59849597_59877942_59878080_59898281_59898407_59900144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002076	chr10	+	578	5	ISM	ENSMUSG00000044475.15	ENST00000672940.1	771	6	1229	0	1229	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGGCTTCCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	59849507	59934055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59849597_59877942_59878080_59898281_59898407_59900144_59900231_59933914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002077	chr10	+	561	5	NNC	ENSMUSG00000044475.15	novel	771	6	NA	NA	1239	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGGCTTCCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	59849517	59934055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_59849597_59877942_59878080_59898288_59898407_59900144_59900231_59933914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002078	chr10	+	409	3	ISM	ENSMUSG00000044475.15	ENST00000317168.11	685	5	29662	-4	29662	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTTCCTAAGGTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	59877940	59934059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_59878080_59898281_59898407_59933914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002079	chr10	+	495	4	NNC	ENSMUSG00000044475.15	novel	771	6	NA	NA	29662	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGGCTTCCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	59877940	59934055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_59878080_59898281_59898407_59900144_59900235_59933914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002080	chr10	+	143	1	NIC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	85634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGGCTTCCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	59933912	59934055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_59933900_59934100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002081	chr10	+	667	4	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	14593	2292	14593	-2289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGCGTGTCCGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	60134875	60136084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_60135009_60135242_60135339_60135557_60135838_60135926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002082	chr10	+	1032	4	ISM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	15645	218	15645	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGGCTTTCCCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	60135927	60138158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_60136085_60136316_60136398_60136552_60136661_60137472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002083	chr10	+	739	1	Genic_Genomic	ENSMUSG00000004207.15	novel	NA	NA	NA	NA	17358	3	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTTGTGTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60137640	60138379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_60137600_60138400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002084	chr10	+	494	1	Genic_Genomic	ENSMUSG00000020101.15	novel	NA	NA	NA	NA	22869	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTGTATTTTTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	60207970	60208464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_60208000_60208500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002085	chr10	+	854	2	FSM	ENSMUSG00000090439.4	ENSMUST00000164428.3	858	2	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTAGACCTTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	60235508	60239338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_60235756_60238731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002086	chr10	-	250	1	NIC	ENSMUSG00000012819.17	novel	3470	25	NA	NA	-84558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCACACCACACACACA	NA	NA	NA	NA	NA	NA	NA	NA	60241875	60241625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_60241600_60241900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002087	chr10	-	484	3	ISM	ENSMUSG00000012819.17	ENST00000442677.4	3470	25	190276	21	-85945	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGAGGAGGACCCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	60243262	60241646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60241873_60242063_60242213_60243153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002088	chr10	-	269	2	ISM	ENSMUSG00000012819.17	ENST00000442677.4	3470	25	188590	1528	-87631	-1528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCTAGCTGTCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	60244948	60243153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60243268_60244793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002089	chr10	-	365	2	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	184551	1700	-91670	-1700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGGGCGACTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	60248987	60246484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60246704_60248841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002090	chr10	-	339	2	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	184027	4055	-92194	-4055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGGGACTCACTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	60249511	60248839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60248988_60249320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002091	chr10	-	348	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	176666	4534	-99555	-4534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACTCCCGCATCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	60256872	60249318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60249511_60255483_60255592_60256824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002092	chr10	-	325	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	171034	10713	-105187	-10713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGACCACGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	60262504	60255497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60255592_60256824_60256938_60262386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002093	chr10	-	284	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	169401	12036	-106820	-12036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATCCCTACTGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	60264137	60256820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60256938_60262386_60262504_60264087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002094	chr10	-	472	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	160880	24747	-115341	-24747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGCAGCTCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	60272658	60269531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60269661_60270285_60270392_60272421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002095	chr10	-	443	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	132156	27656	132156	-27656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTGGTGCGGCTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	60301382	60272440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60272660_60274574_60274640_60301223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002096	chr10	-	447	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	110637	56438	110637	-56438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCCCAGGTCCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	60322901	60301222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60301383_60301781_60301932_60322764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002097	chr10	-	376	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	109102	57087	109102	-57087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAACCTCCGTCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	60324436	60301871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60301932_60322764_60322958_60324313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002098	chr10	-	278	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	74228	78054	74228	-78054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATTACAGAGCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	60359310	60322838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60322958_60324313_60324427_60359264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002099	chr10	-	272	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	66674	79588	66674	-79588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCTGCTGGACCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	60366864	60324372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60324427_60359264_60359344_60366725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002100	chr10	-	404	3	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	63174	114479	63174	-114479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCAAAGCCTGCGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	60370364	60359263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60359344_60366725_60366855_60370169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002101	chr10	-	480	4	ISM	ENSMUSG00000012819.17	ENST00000299366.11	2969	22	1	125384	1	-125384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCACTGCCCTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60433537	60370168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60370365_60432493_60432587_60432713_60432762_60433394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002102	chr10	-	1450	1	ISM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	39261	0	39261	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTGGTGTCTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	60549300	60547850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60547800_60549300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002103	chr10	-	2051	1	ISM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	36707	1953	36707	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCACACCAATTGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	60551854	60549803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60549800_60551900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002104	chr10	-	2089	2	ISM	ENSMUSG00000020100.16	ENSMUST00000119595.8	3123	5	28984	411	28984	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGTGCCACATCCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	60559577	60550215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60552270_60559542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002105	chr10	-	1977	1	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	47026	0	47026	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	60936397	60934420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_60934400_60936400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002106	chr10	-	772	1	ISM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	23399	0	23396	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGTGGTTTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	61265041	61264269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61264300_61265000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002107	chr10	+	762	2	ISM	ENSMUSG00000037151.9	ENST00000358141.6	1175	3	-3	2053	-3	-2053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACCATTCTGAGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	61383822	61416498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_61383995_61415908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002108	chr10	+	575	2	NNC	ENSMUSG00000037151.9	novel	1175	3	NA	NA	6	-2227	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGCTTGGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	61383831	61416324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_61383991_61415908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002109	chr10	+	704	2	NNC	ENSMUSG00000037151.9	novel	1175	3	NA	NA	32384	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGCTAATCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	61416209	61418553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_61416790_61418429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002110	chr10	+	518	2	NNC	ENSMUSG00000037151.9	novel	1175	3	NA	NA	32566	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGTGCTAATCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	61416391	61418552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_61416790_61418432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002111	chr10	+	2160	1	ISM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	104831	0	32585	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	61416410	61418570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_61416400_61418600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002112	chr10	+	2596	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61516105	61529076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002113	chr10	+	426	2	FSM	ENSMUSG00000020087.6	ENST00000335494.5	1610	2	953	231	953	-231	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGGGAGAAAGCGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	61532326	61538043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_61532522_61537812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002114	chr10	+	458	2	ISM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	4013	384	3932	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCAACTTCTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	61535305	61538168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_61535408_61537812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002115	chr10	+	561	1	ISM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	6699	0	6618	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTTGGCTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61537991	61538552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_61538000_61538600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002116	chr10	+	2536	4	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	16998	-6	11672	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	61568099	61574432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_61568211_61570055_61570209_61571236_61571438_61572361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002117	chr10	-	430	1	ISM	ENSMUSG00000020086.7	ENST00000677881.1	1626	6	18866	0	18866	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTTCTTATAACATAGC	NA	NA	NA	NA	NA	NA	NA	NA	61574866	61574436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61574400_61574900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002118	chr10	-	759	4	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	36164	410	10183	-403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTCTTTCCATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	61583549	61574846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002119	chr10	-	487	3	ISM	ENSMUSG00000020086.7	ENST00000677881.1	1626	6	6076	2477	6076	-2470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACCCAGTTTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	61587656	61576913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61577089_61585054_61585166_61587455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002120	chr10	-	453	4	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	34547	2501	8566	-2494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCACCGTTCCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	61585166	61576937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61577089_61582411_61582502_61583450_61583551_61585054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002121	chr10	-	421	3	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	32057	9005	6076	-8998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGTTGGAGAAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	61587656	61583441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61583551_61585054_61585166_61587455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002122	chr10	-	639	4	ISM	ENSMUSG00000020086.7	ENST00000677881.1	1626	6	-3	10628	-3	-10621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGCAGAAGGTAATAACAC	NA	NA	NA	NA	NA	NA	NA	NA	61593735	61585064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61585166_61587455_61587654_61589240_61589348_61593502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002123	chr10	-	536	2	ISM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	60	19059	60	-19059	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCCAGCATTGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	61619866	61593502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61593734_61619561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002124	chr10	-	435	3	ISM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	62	19066	62	-19059	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCCAGCATTGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	61619651	61593502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61593734_61617670_61617785_61619561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002125	chr10	-	352	4	ISM	ENSMUSG00000058806.16	ENST00000673842.1	2189	28	129676	-2	129430	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCTAATACACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	61684985	61674292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002126	chr10	-	438	2	ISM	ENSMUSG00000058806.16	ENST00000522165.5	1818	30	-78	121209	-78	-121209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGCCCTGCAAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	61814493	61797065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61797138_61814127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002127	chr10	+	1625	1	FSM	ENSMUSG00000046687.7	ENSMUST00000053865.7	1240	1	-110	-275	-110	275	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTCAGGTTCTATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	61906791	61908416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_61906800_61908400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002128	chr10	-	940	1	ISM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	2456	0	2351	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCAGATCTTGAATTCG	NA	NA	NA	NA	NA	NA	NA	NA	61944373	61943433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_61943400_61944400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002129	chr10	-	1119	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	61946813	61943988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_61944903_61945662_61945792_61946737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002130	chr10	-	2042	1	Genic_Genomic	ENSMUSG00000037031.11	novel	NA	NA	NA	NA	43815	1	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGGTGTTTTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	62023215	62021173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_62021200_62023200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002131	chr10	-	2173	3	ISM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	41390	759	41390	-759	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCCGGTCTCGGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	62025640	62021933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62023942_62024421_62024539_62025592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002132	chr10	-	440	1	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	20090	0	20090	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTTGTAATTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	62265427	62264987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62265000_62265400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002133	chr10	-	468	3	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	17356	401	17356	-401	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAGGCCACAGAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	62268161	62265388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62265614_62266249_62266399_62268067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002134	chr10	-	456	4	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	14192	3190	14192	-3190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCAGAGCTGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	62271325	62268177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62268245_62268830_62268912_62270173_62270394_62271237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002135	chr10	-	461	3	ISM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	23	17841	23	-17841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAATGATATCTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	62285494	62282828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62282911_62283474_62283553_62285193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002136	chr10	-	1972	4	FSM	ENSMUSG00000036955.17	ENST00000674936.1	1971	4	4	-5	4	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGCACATAATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	62414160	62394287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_62395663_62406177_62406258_62410828_62410928_62413742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002137	chr10	-	723	1	ISM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	19221	44	19149	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGAACTTGCACATAAT	NA	NA	NA	NA	NA	NA	NA	NA	62395015	62394292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62394300_62395000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002138	chr10	-	1064	4	ISM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	8741	693	8741	-693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATCACTGCAGATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	62405423	62394985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002139	chr10	-	702	4	ISM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	23	7569	23	-7569	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTATTTTTGGTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	62414141	62401861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62401901_62405237_62405422_62406177_62406258_62413742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002140	chr10	-	411	1	Genic_Genomic	ENSMUSG00000020075.9	novel	NA	NA	NA	NA	21622	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGGTGGCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	62416438	62416027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_62416000_62416400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002141	chr10	-	414	3	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	11560	8405	11560	-8405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTGGTCTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62426500	62424434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62424598_62425556_62425707_62426399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002142	chr10	-	436	3	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	9168	10370	9168	-10370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATGATTCATTTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	62428892	62426399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62426546_62427595_62427782_62428788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002143	chr10	-	413	2	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	3703	14795	3703	-14795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCAAAGGTGAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	62434357	62430824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62430891_62434010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002144	chr10	-	505	2	ISM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	3	18287	3	-18287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGGACTCTCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	62438057	62434316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62434671_62437906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002145	chr10	-	322	1	ISM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	47452	530	47452	4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTATTGAAGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	62580558	62580236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62580200_62580600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002146	chr10	-	490	2	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	46820	75	46765	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTTAGGATGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	62581245	62580315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62580602_62581041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002147	chr10	-	456	3	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	44827	39	44786	-39	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATGGATGATATC	NA	NA	NA	NA	NA	NA	NA	NA	62583224	62581079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62581248_62582679_62582866_62583122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002148	chr10	-	271	2	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	41577	2081	41536	-2081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGTATTTACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	62586474	62583121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62583244_62586325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002149	chr10	-	351	2	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	38857	6484	38816	-6484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGTATGTATGCATCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	62589194	62587524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62587634_62588952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002150	chr10	-	396	2	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	35634	7912	35593	-7912	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTAATTTCCAAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	62592417	62588952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62589193_62592261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002151	chr10	-	353	2	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	31991	11248	31950	-11248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATAATAAAGAACATTC	NA	NA	NA	NA	NA	NA	NA	NA	62596060	62592288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62592454_62595872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002152	chr10	-	349	3	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	27793	14909	27752	-14909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAGAAGGAATTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	62600258	62595949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62596059_62599218_62599303_62600102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002153	chr10	-	381	2	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	26837	19061	26796	-19061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAACGCTAATCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	62601214	62600101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62600314_62601045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002154	chr10	-	507	3	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	21253	20678	21212	-20678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAATGTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	62606798	62601718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62601835_62602335_62602562_62606633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002155	chr10	-	325	2	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	15510	26674	15469	-26674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTTTAAGGCAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	62612541	62607714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62607845_62612346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002156	chr10	-	504	3	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	11636	31306	11595	-31306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTAAACATAATGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	62616415	62612346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62612540_62612627_62612743_62616219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002157	chr10	-	351	3	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	6	40969	-3	-40169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTTAAAGTCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	62628059	62621209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62621374_62626699_62626822_62627994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002158	chr10	+	343	1	Genic_Genomic	ENSMUSG00000020070.19	novel	NA	NA	NA	NA	23873	11	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAAACAATTTCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	62839913	62840256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_62839900_62840300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002159	chr10	-	955	1	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	8276	0	8229	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGTCCTAGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	62851397	62850442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62850400_62851400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002160	chr10	-	1222	5	ISM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	6643	184	6596	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTAAGTGCCCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	62853030	62850626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002161	chr10	-	1337	1	ISM	ENSMUSG00000020063.17	ENST00000406900.5	3126	7	11477	0	6525	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGTTCATAGCATACTA	NA	NA	NA	NA	NA	NA	NA	NA	63156117	63154780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_63154800_63156100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002162	chr10	-	2759	4	ISM	ENSMUSG00000020063.17	ENST00000403579.1	3124	6	1671	0	1671	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTAACTTCCATTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	63160971	63154790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002163	chr10	+	1438	1	Genic_Genomic	ENSMUSG00000036764.13	novel	NA	NA	NA	NA	22580	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAAGCATCTGACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	63244921	63246359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_63244900_63246400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002164	chr10	+	181	2	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	31096	37856	31096	-37856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTTTGTTAAAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	67052768	67053879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67052887_67053816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002165	chr10	+	605	2	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	32492	36482	32492	-36482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGAACGACACTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	67054164	67055253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67054249_67054732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002166	chr10	+	599	2	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	38171	30738	38171	-30738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAACCTTTCTGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	67059843	67060997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67059961_67060515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002167	chr10	+	589	2	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	40605	25941	40605	-25941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGTGTTTTGTAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	67062277	67065794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67062699_67065626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002168	chr10	+	356	2	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	44015	23770	44015	-23770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGATGTTAATATAACA	NA	NA	NA	NA	NA	NA	NA	NA	67065687	67067965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67065829_67067750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002169	chr10	+	644	2	ISM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	68556	-1	68556	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCACGTCATAATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	67090228	67091736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67090363_67091226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002170	chr10	+	304	1	ISM	ENSMUSG00000037876.18	ENSMUST00000051446.16	8382	26	128759	6	70123	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTTACAGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	67091795	67092099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67091800_67092100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002171	chr10	-	1613	3	FSM	ENSMUSG00000075000.12	ENST00000435510.6	1613	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGTATGACTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	67120964	67102462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_67103946_67105884_67105926_67120875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002172	chr10	-	1490	1	NIC	ENSMUSG00000075000.12	novel	1613	3	NA	NA	17007	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGTATGACTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	67103952	67102462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_67102500_67104000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002173	chr10	-	1588	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	84	141	-36	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTAACTTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	67121000	67102608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002174	chr10	+	1581	2	FSM	ENSMUSG00000037868.16	ENSMUST00000048289.14	2965	2	243	1141	242	-1141	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACACTACCACCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	67373941	67376877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_67374220_67375574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002175	chr10	+	1383	1	ISM	ENSMUSG00000037868.16	ENSMUST00000048289.14	2965	2	2937	0	2123	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTGCAGAGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	67376635	67378018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67376600_67378000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002176	chr10	-	551	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	4008	-1	4008	1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAAATAATGTTGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	67380890	67380339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_67380300_67380900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002177	chr10	-	1583	1	ISM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	24977	0	24977	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTTCCTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	67723515	67721932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_67721900_67723500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002178	chr10	-	1666	3	ISM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	15203	1387	15203	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGAATAATGTTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	67733289	67723319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_67724922_67725782_67725821_67733263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002179	chr10	+	696	1	ISM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	62843	760	62698	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCCAGAGGGTATTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	67878242	67878938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_67878200_67878900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002180	chr10	-	1236	4	ISM	ENSMUSG00000019947.11	ENST00000644638.1	1279	5	549	-1	549	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTCGACTTTACATCAC	NA	NA	NA	NA	NA	NA	NA	NA	68114017	67993942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_67994464_68021855_68022087_68078833_68079060_68113759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002181	chr10	-	1234	4	NNC	ENSMUSG00000019947.11	novel	1279	5	NA	NA	548	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCTCGACTTTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	68114018	67993943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_67994462_68021855_68022087_68078833_68079060_68113759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002182	chr10	-	1661	1	ISM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	16132	0	13336	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGACTTAAGCAGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	69172636	69170975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_69171000_69172600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002183	chr10	-	1923	3	ISM	ENSMUSG00000019942.14	ENST00000316629.8	925	6	9262	-1324	9262	1324	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATAAGATTGCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	69176710	69172811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_69174427_69176310_69176453_69176544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002184	chr10	-	619	3	ISM	ENSMUSG00000019942.14	ENST00000614696.4	1115	7	9261	0	9261	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTCACTGTGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	69176711	69174135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_69174427_69176310_69176472_69176544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002185	chr10	-	305	1	NIC	ENSMUSG00000019942.14	novel	4375	8	NA	NA	11532	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGTCACTGTGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	69174440	69174135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_69174100_69174400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002186	chr10	-	589	4	ISM	ENSMUSG00000019942.14	ENST00000316629.8	925	6	3909	2175	3909	-2157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGCTGTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	69182063	69176310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_69176453_69176544_69176709_69180890_69181015_69181904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002187	chr10	-	446	3	ISM	ENSMUSG00000019942.14	ENST00000614696.4	1115	7	7459	2198	7459	-2180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACGGCTTGGATTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	69178513	69176333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_69176472_69176544_69176709_69178369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002188	chr10	-	464	3	ISM	ENSMUSG00000019942.14	ENST00000614696.4	1115	7	4954	2408	4954	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTTTTATACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	69181018	69176543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_69176709_69178369_69178541_69180890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002189	chr10	-	446	3	ISM	ENSMUSG00000019942.14	ENST00000614696.4	1115	7	3909	4242	3909	-4224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGAGGTAAGGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	69182063	69178377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_69178541_69180890_69181015_69181904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002190	chr10	+	4515	5	ISM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	71989	134	71989	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGACATTCTCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70004939	70028896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002191	chr10	+	4002	1	Genic_Genomic	ENSMUSG00000048701.14	novel	NA	NA	NA	NA	92079	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGAACTGTCAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	70025029	70029031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_70025000_70029000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002192	chr10	+	444	3	FSM	ENSMUSG00000019933.8	ENSMUST00000020090.8	443	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGGCATGGAGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	70040495	70055541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_70040590_70052781_70052897_70055306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002193	chr10	+	425	3	ISM	ENSMUSG00000043259.16	ENST00000435852.6	1675	13	-55	103368	-15	-103368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTTCACTATCCGATC	NA	NA	NA	NA	NA	NA	NA	NA	70276740	70287059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70276906_70284587_70284645_70286856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002194	chr10	+	368	3	ISM	ENSMUSG00000043259.16	ENST00000435852.6	1675	13	7792	77335	7744	-77335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAACCAAGGTGAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	70284587	70313092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70284645_70286856_70287059_70312983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002195	chr10	+	389	3	ISM	ENSMUSG00000043259.16	ENST00000435852.6	1675	13	10058	55647	10010	-55647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTGGAAAAATTACGGGT	NA	NA	NA	NA	NA	NA	NA	NA	70286853	70334780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70287059_70312983_70313103_70334715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002196	chr10	+	416	3	ISM	ENSMUSG00000043259.16	ENST00000611933.4	2916	12	93801	6930	93667	-2840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCGACACCATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	70370510	70387587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70370725_70372195_70372335_70387524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002197	chr10	+	378	3	ISM	ENSMUSG00000043259.16	ENST00000611933.4	2916	12	95486	5516	95352	-1426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGGGAAGCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	70372195	70389001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70372335_70387524_70387621_70388858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002198	chr10	+	366	3	NIC	ENSMUSG00000043259.16	novel	3310	14	NA	NA	95413	-1374	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTGAGCAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70372256	70389053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_70372335_70387524_70387621_70388861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002199	chr10	+	395	3	ISM	ENSMUSG00000043259.16	ENST00000435852.6	1675	13	110729	8	110681	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTGAGTGGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	70387524	70390419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70387621_70388858_70389056_70390317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002200	chr10	+	1239	3	ISM	ENSMUSG00000043259.16	ENSMUST00000062883.7	3262	14	112160	495	112072	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCTTGGAAATCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	70388915	70394066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70389056_70390317_70390420_70393069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002201	chr10	+	1011	1	ISM	ENSMUSG00000043259.16	ENSMUST00000173042.9	3310	14	116846	0	116712	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTTGAAAGCACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	70393555	70394566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_70393600_70394600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002202	chr10	-	185	1	Genic_Genomic	ENSMUSG00000003923.15	novel	NA	NA	NA	NA	12033	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTTTTTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	71061475	71061290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_71061300_71061500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002203	chr10	-	219	2	ISM	ENSMUSG00000003923.15	ENSMUST00000121685.8	899	7	2068	6352	2068	-6352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATCACCGAGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	71071440	71070693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_71070845_71071372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002204	chr10	-	1098	3	ISM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	26953	0	26953	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	71094139	71090809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_71091705_71092444_71092539_71094030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002205	chr10	-	899	1	NIC	ENSMUSG00000019927.7	novel	1431	7	NA	NA	29384	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	71091708	71090809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_71090800_71091700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002206	chr10	-	1083	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGCTCTGTAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	71180782	71166308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_71166957_71172043_71172250_71180553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002207	chr10	-	649	1	NIC	ENSMUSG00000037710.9	novel	1084	3	NA	NA	13826	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGCTCTGTAACGG	NA	NA	NA	NA	NA	NA	NA	NA	71166958	71166309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_71166300_71167000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002208	chr10	+	1453	5	ISM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	1718	0	1667	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTCCTTGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	72492394	72510796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002209	chr10	+	752	5	ISM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	1723	0	1723	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72492450	72504997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002210	chr10	+	346	4	ISM	ENSMUSG00000009681.11	ENST00000621462.4	532	5	34	1462	34	-1462	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATCGAGGGCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	75011141	75016091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_75011169_75012174_75012285_75013715_75013789_75015955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002211	chr10	+	425	4	ISM	ENSMUSG00000009681.11	ENST00000621462.4	532	5	1113	0	1113	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCCAGGTATAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75012220	75017553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_75012285_75013715_75013789_75015955_75016091_75017400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002212	chr10	+	280	2	NNC	ENSMUSG00000009681.11	novel	532	5	NA	NA	4851	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCCAGGTATAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75015958	75017553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_75016091_75017405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002213	chr10	+	154	1	NIC	ENSMUSG00000009681.11	novel	6839	23	NA	NA	6292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCCAGGTATAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75017399	75017553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_75017400_75017600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002214	chr10	+	1515	2	ISM	ENSMUSG00000033444.15	ENSMUST00000040105.8	5928	16	11255	65915	11255	-64579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGACCAGATAGAGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	75076943	75082318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_75077053_75080912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002215	chr10	-	515	4	ISM	ENSMUSG00000033416.16	ENST00000447813.6	592	5	5074	0	5074	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCAGGCTTCTGGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	75347991	75344632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75344804_75345865_75345958_75346954_75347121_75347905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002216	chr10	+	2508	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	343	185	-149	-185	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGATCAAAGACTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	75353727	75373030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002217	chr10	+	1952	1	Genic_Genomic	ENSMUSG00000020180.11	novel	NA	NA	NA	NA	17388	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATTATTCCAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	75371264	75373216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_75371300_75373200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002218	chr10	+	809	4	FSM	ENSMUSG00000006345.11	ENST00000404223.5	809	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAAGAGGCAAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75420629	75421865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_75420842_75420991_75421120_75421220_75421539_75421714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002219	chr10	+	761	4	NNC	ENSMUSG00000006345.11	novel	809	4	NA	NA	40	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAAGAGGCAAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75420669	75421865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_75420842_75420991_75421120_75421228_75421539_75421714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002220	chr10	+	833	4	ISM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	20166	-2	20166	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCGTGAACTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	75445693	75451009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_75445786_75445881_75446066_75446261_75446373_75450563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002221	chr10	-	574	2	FSM	ENSMUSG00000001666.9	ENSMUST00000172820.2	574	2	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTTTGCTTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	75608866	75607061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_75607341_75608571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002222	chr10	-	279	1	NIC	ENSMUSG00000001666.9	novel	574	2	NA	NA	1526	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTCTTTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75607342	75607063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_75607100_75607300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002223	chr10	-	616	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	-1	34	-1	-34	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAGCAAATAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	75609249	75607100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_75607341_75608571_75608748_75609049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002224	chr10	-	495	1	ISM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	6805	0	6409	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGCTTCTGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	75610443	75609948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75609900_75610400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002225	chr10	-	505	3	ISM	ENSMUSG00000033318.8	ENST00000402588.6	701	5	1473	-2	1473	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAATAAAGACTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	75668647	75667708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75667929_75668270_75668403_75668494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002226	chr10	-	222	1	NIC	ENSMUSG00000033318.8	novel	2254	6	NA	NA	2189	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCAATAAAGACTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	75667931	75667709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_75667700_75667900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002227	chr10	-	454	4	ISM	ENSMUSG00000033318.8	ENST00000402588.6	701	5	29	560	29	-488	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACGCTAGCGGATCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	75670091	75668270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75668403_75668494_75668646_75669485_75669574_75670008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002228	chr10	-	553	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	-7	-2	-7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTCAGCTTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	75696081	75695184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_75695378_75695520_75695694_75695894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002229	chr10	-	531	3	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGCCTCAGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75696071	75695186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_75695378_75695520_75695684_75695894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002230	chr10	-	525	3	NNC	ENSMUSG00000033307.8	novel	544	3	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGCCTCAGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75696051	75695186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_75695378_75695516_75695694_75695894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002231	chr10	-	1356	8	FSM	ENSMUSG00000000902.14	ENST00000263121.12	1352	8	6	-10	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTCTGTGCAGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	75757293	75732610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75750897_75751028_75752606_75752746_75757136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002232	chr10	-	627	4	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	9955	7607	9806	-7597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGATAACCAGCATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	75747493	75740217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75740409_75741863_75742031_75745987_75746116_75747352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002233	chr10	-	649	5	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	4706	9276	4557	-9266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACCAGCGTGTCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	75752742	75741886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002234	chr10	-	675	4	ISM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	17	14742	17	-14732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAAGCGCCGCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	75757431	75747352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75747491_75750897_75751028_75752633_75752746_75757136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002235	chr10	-	586	1	NIC	ENSMUSG00000000901.18	novel	1793	9	NA	NA	8668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75759641	75759055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_75759100_75759600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002236	chr10	-	1026	3	ISM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	5846	345	5846	-345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTAAGCAACTGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	75762463	75759400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75759950_75761253_75761512_75762244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002237	chr10	-	582	3	ISM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	5608	2211	5608	-2211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATGCTGAGGGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	75762701	75761266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75761512_75762244_75762462_75762581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002238	chr10	-	600	3	ISM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	5209	3186	5209	-3186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGGATTGGAAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	75763100	75762241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_75762462_75762581_75762824_75762962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002239	chr10	+	441	3	ISM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	-1	138	-1	-138	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTGGTGCATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75771783	75773295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_75771839_75772071_75772280_75773117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002240	chr10	+	361	3	ISM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	331	-1	331	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCCTGCTCATCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75772115	75773434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_75772280_75773117_75773289_75773408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002241	chr10	-	1159	5	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	20376	-5	20375	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCTGTTTCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	76053295	76043055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002242	chr10	-	412	3	ISM	ENSMUSG00000020230.16	ENSMUST00000099572.10	2100	11	11521	15276	11521	-15276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCGGCACCGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	76062149	76058341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76058445_76061121_76061305_76062023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002243	chr10	+	502	1	ISM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	23371	0	23371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCAGATTGATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	76390811	76391313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_76390800_76391300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002244	chr10	-	1694	4	ISM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	19423	0	19118	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTGCCAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	76440041	76431595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76432646_76439162_76439202_76439295_76439749_76439889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002245	chr10	-	1002	1	Genic_Genomic	ENSMUSG00000001119.8	novel	NA	NA	NA	NA	16376	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGCCTCTTTATCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	76545626	76544624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_76544600_76545600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002246	chr10	-	1186	3	ISM	ENSMUSG00000001119.8	ENSMUST00000001147.5	4100	35	15026	415	15026	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACATGAAGCAGACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	76546976	76545040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76546016_76546179_76546210_76546795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002247	chr10	-	486	1	Genic_Genomic	ENSMUSG00000001120.16	novel	NA	NA	NA	NA	38575	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGACTTCTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	76598175	76597689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_76597700_76598200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002248	chr10	-	652	2	ISM	ENSMUSG00000001120.16	ENST00000400310.5	1056	12	37525	-437	37525	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGGGTGTATCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	76599225	76597878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76598361_76599055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002249	chr10	-	526	5	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	11045	8460	11045	-8460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTACCCAGCTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	76625705	76606793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76606871_76617665_76617708_76620904_76621049_76624224_76624354_76625571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002250	chr10	-	623	1	ISM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	113748	0	60905	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	76888634	76888011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76888000_76888600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002251	chr10	-	803	3	ISM	ENSMUSG00000001435.16	ENSMUST00000105409.8	4791	41	58814	-187	58814	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATACAACAGTCACATG	NA	NA	NA	NA	NA	NA	NA	NA	76890725	76888662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76889242_76889988_76890105_76890617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002252	chr10	-	643	3	ISM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	28	43868	28	-42852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGCTGGCCTCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	77002354	76931879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_76932370_77002123_77002195_77002272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002253	chr10	-	591	2	FSM	ENSMUSG00000078444.4	ENSMUST00000105408.4	708	2	128	-11	128	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGGAGTACCTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	77094929	77093598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_77093821_77094560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002254	chr10	+	652	4	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	93	6198	93	-6198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCCCAGGCCTTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	77095144	77099211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002255	chr10	+	1068	4	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	6618	412	6618	-412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGCCAGTGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	77101669	77104997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77101796_77102746_77102928_77103017_77103142_77104360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002256	chr10	+	641	1	ISM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	9717	0	9717	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	77104768	77105409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77104800_77105400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002257	chr10	-	368	1	Genic_Genomic	ENSMUSG00000032977.10	novel	NA	NA	NA	NA	28758	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGTCCCCTGGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	77322861	77322493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_77322500_77322900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002258	chr10	-	544	3	ISM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	18272	1489	18272	-1489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCCACTTCAAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	77333347	77323983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_77324308_77325831_77325901_77333196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002259	chr10	+	947	5	ISM	ENSMUSG00000000290.14	ENST00000397854.7	1824	11	9442	489	9442	-489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTACAGGCGCTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	77393819	77400589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77393974_77395312_77395562_77395983_77396207_77396846_77397050_77400471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002260	chr10	+	362	3	ISM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	8	8990	8	-7527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGTTTTCCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	77417561	77425576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77417762_77423084_77423138_77425467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002261	chr10	+	344	3	ISM	ENSMUSG00000009291.14	ENSMUST00000162943.9	721	6	4841	4243	4841	-4243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCTCGGTCAGGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	77423083	77428860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77423138_77425467_77425577_77428679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002262	chr10	+	318	3	ISM	ENSMUSG00000009291.14	ENSMUST00000162943.9	721	6	7237	3357	7237	-3357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGAGCTGGGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	77425479	77429746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77425577_77428679_77428852_77429697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002263	chr10	+	501	3	ISM	ENSMUSG00000009291.14	ENSMUST00000162943.9	721	6	10435	-38	10435	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCCCCACACTCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	77428677	77433141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77428852_77429697_77429745_77432861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002264	chr10	+	309	1	Genic_Genomic	ENSMUSG00000009291.14	novel	NA	NA	NA	NA	16016	1	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTTCTTTGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	77434258	77434567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_77434300_77434600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002265	chr10	+	1099	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	18	1513	18	70	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGGTACTGGTACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	77441948	77452652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002266	chr10	+	459	3	ISM	ENSMUSG00000020265.17	ENSMUST00000099538.6	1874	4	127	3384	127	-2269	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCAGCCCAGGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	77442531	77449872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77442803_77445645_77445775_77449813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002267	chr10	+	249	1	ISM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	11077	909	3465	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	77453007	77453256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77453000_77453300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002268	chr10	+	729	1	Genic_Genomic	ENSMUSG00000020265.17	novel	NA	NA	NA	NA	3898	4	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGAGTAAACATGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	77453440	77454169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_77453400_77454200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002269	chr10	+	2029	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTGTGGTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	77458111	77481828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002270	chr10	-	592	6	ISM	ENSMUSG00000009292.19	ENST00000621064.1	766	7	885	0	885	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGGGCCACAATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	77753968	77746004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_77746130_77747122_77747240_77748411_77748514_77749638_77749745_77750545_77750633_77753913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002271	chr10	+	1478	4	ISM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	3077	-1	2928	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGTGTCCCAGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	77817434	77821269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_77817648_77818703_77818876_77819349_77819426_77820252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002272	chr10	-	331	4	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	8803	0	8803	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCCCGCTGGCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	77870534	77866116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_77866159_77867654_77867720_77870214_77870324_77870419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002273	chr10	-	400	3	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	6716	4302	6716	-4302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAAGGGGGCACCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	77872621	77870418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_77870535_77871486_77871668_77872518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002274	chr10	-	400	3	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	5512	5370	5512	-5370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGACCCCTAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	77873825	77871486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_77871668_77872518_77872619_77873706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002275	chr10	-	426	4	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	828	9719	828	-9719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAAGGCCCGGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	77878509	77875835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_77875914_77877333_77877448_77877894_77877970_77878350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002276	chr10	-	447	4	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	438	11279	438	-11279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTCCAGGAACCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	77878899	77877395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_77877448_77877894_77877970_77878350_77878507_77878735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002277	chr10	-	415	4	ISM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	69	11815	69	-11815	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAACTTGGAGTCACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	77879268	77877931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_77877970_77878350_77878507_77878735_77878911_77879222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002278	chr10	-	629	1	ISM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	13612	0	13612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTGTCTGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	78007371	78006742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78006700_78007400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002279	chr10	-	2362	2	ISM	ENSMUSG00000001211.16	ENSMUST00000105387.8	1316	9	21175	-2049	21175	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAATGCTTTTTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	78110053	78107395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78109610_78109905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002280	chr10	+	500	1	FSM	ENSMUSG00000064317.6	ENSMUST00000072739.6	309	1	-23	-168	-23	168	mono-exon	FALSE	NA	NA	NA	NA	NA	1399	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATTTATTTTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	78229130	78229630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_78229100_78229600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002281	chr10	-	1276	6	ISM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	7757	0	6204	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTTCTCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	78241120	78236219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002282	chr10	-	1240	5	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	6232	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTTCTCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	78241092	78236219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_78236819_78237683_78237801_78238431_78238542_78239338_78239419_78240758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002283	chr10	-	1283	5	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	6204	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTTCTCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	78241120	78236219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_78236819_78237683_78237828_78238443_78238542_78239338_78239419_78240758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002284	chr10	-	1266	5	NNC	ENSMUSG00000061032.10	novel	1984	13	NA	NA	6207	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGCTGCTTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	78241117	78236222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_78236819_78237683_78237801_78238427_78238542_78239338_78239419_78240758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002285	chr10	+	606	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	1	-4	1	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCCTTAGTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	78261503	78263460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_78261692_78262760_78262863_78263144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002286	chr10	+	329	1	Genic_Genomic	ENSMUSG00000005054.8	novel	NA	NA	NA	NA	1630	5	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCTTAGTTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	78263132	78263461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_78263100_78263500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002287	chr10	-	1194	1	ISM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	27038	0	26916	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTAGTGTGGTCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	78273771	78272577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78272600_78273800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002288	chr10	-	1349	1	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	6113	0	6113	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGACTGAGTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	78421685	78420336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78420300_78421700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002289	chr10	-	1617	3	ISM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	4927	97	4927	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCCAATGGTGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	78422871	78420433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78421746_78421923_78422150_78422792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002290	chr10	-	560	4	ISM	ENSMUSG00000005355.10	ENST00000427043.4	702	5	245	-3	245	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGGATGGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	78551001	78549164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78549276_78549823_78549928_78550081_78550194_78550768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002291	chr10	-	479	3	ISM	ENSMUSG00000005355.10	ENST00000427043.4	702	5	13	912	13	-912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCTCTCAGATGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	78551233	78550079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78550194_78550768_78550995_78551094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002292	chr10	-	465	3	NNC	ENSMUSG00000005355.10	novel	2336	7	NA	NA	2	-930	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCACGGTAGAGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	78551244	78550097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_78550187_78550768_78550995_78551094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002293	chr10	+	890	5	ISM	ENSMUSG00000005357.10	ENST00000598504.5	946	6	1564	0	1564	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGTGAGTCCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78623644	78632107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_78623799_78624792_78624931_78626998_78627204_78629123_78629167_78631757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002294	chr10	-	679	1	ISM	ENSMUSG00000060301.7	ENSMUST00000039271.7	4229	6	32548	0	32473	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCAGGATATTTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	78900886	78900207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_78900200_78900900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002295	chr10	-	540	1	ISM	ENSMUSG00000112907.2	ENSMUST00000217947.2	2709	2	4404	0	4404	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79249335	79248795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79248800_79249300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002296	chr10	-	703	2	FSM	ENSMUSG00000112907.2	ENSMUST00000217947.2	2709	2	40	1966	40	-1966	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCCATAGTTATTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	79253699	79250761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_79251194_79253428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002297	chr10	-	618	1	Genic_Genomic	ENSMUSG00000052151.13	novel	NA	NA	NA	NA	6714	4	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGATTTTTCAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	79362877	79362259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_79362300_79362900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002298	chr10	-	1325	4	ISM	ENSMUSG00000052151.13	ENSMUST00000166804.2	1566	6	2987	0	2984	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	79366607	79362268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002299	chr10	-	665	4	ISM	ENSMUSG00000052151.13	ENSMUST00000166804.2	1566	6	2731	1013	2728	-421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCTACTTGCCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	79366863	79363281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79363461_79363648_79363707_79366331_79366607_79366710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002300	chr10	-	640	4	ISM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	0	1403	0	-806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGTTGTTCCTGGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	79369630	79363666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79363707_79366331_79366607_79366710_79366863_79369457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002301	chr10	-	955	1	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	13892	0	761	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	79377033	79376078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79376100_79377000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002302	chr10	-	1258	2	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	13218	57	87	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGACTGCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	79377707	79376135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79377034_79377347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002303	chr10	+	1145	2	FSM	ENSMUSG00000020308.8	ENSMUST00000020552.8	1143	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGCTGGTCACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79505201	79511962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_79505618_79511233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002304	chr10	+	250	1	ISM	ENSMUSG00000020308.8	ENSMUST00000020552.8	1143	2	6508	1	6467	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTTGCTGGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	79511710	79511960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79511700_79512000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002305	chr10	+	1265	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTCACTACTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	79540324	79547804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002306	chr10	+	1261	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540325	79547803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002307	chr10	+	1253	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540327	79547803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546775_79547327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002308	chr10	+	1252	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	9	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540333	79547803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002309	chr10	+	1242	6	NNC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79540342	79547803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546779_79547327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002310	chr10	+	1162	5	NNC	ENSMUSG00000023175.16	novel	1240	6	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79545503	79547803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002311	chr10	+	476	1	ISM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	7003	0	1896	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79547327	79547803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79547300_79547800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002312	chr10	-	333	1	Genic_Genomic	ENSMUSG00000035890.10	novel	NA	NA	NA	NA	7977	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGTGTCCATGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	79594680	79594347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_79594300_79594700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002313	chr10	+	993	3	ISM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	2762	581	2762	-581	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCCCCAAGCCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79615867	79617883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79616015_79616957_79617186_79617265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002314	chr10	+	647	1	Genic_Genomic	ENSMUSG00000020325.11	novel	NA	NA	NA	NA	4713	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATTTTCTGCCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79617818	79618465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_79617800_79618500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002315	chr10	+	2460	6	FSM	ENSMUSG00000035863.15	ENST00000264560.11	2466	6	26	-20	26	19	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTAGAGCCAGGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	79629461	79656749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79654817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002316	chr10	+	1670	2	ISM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	21607	249	21512	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTCAAGCAGAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	79651012	79656481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79651076_79654874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002317	chr10	+	1647	3	ISM	ENSMUSG00000035863.15	ENSMUST00000046945.13	2651	9	21637	374	21542	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGAGCTGACTCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	79651042	79656356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79651076_79652625_79652758_79654874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002318	chr10	+	1672	1	Genic_Genomic	ENSMUSG00000035863.15	novel	NA	NA	NA	NA	25578	20	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGAGCCAGGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79655078	79656750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_79655100_79656800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002319	chr10	-	203	1	Genic_Genomic	ENSMUSG00000091994.3	novel	NA	NA	NA	NA	3374	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTGCTTGTGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79687416	79687213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_79687200_79687400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002320	chr10	+	1334	6	NNC	ENSMUSG00000006498.17	novel	1336	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCCCCTGAGCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79690442	79699747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79690556_79692337_79692369_79698249_79698376_79698486_79698704_79698811_79698890_79698978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002321	chr10	+	1037	1	ISM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	9106	0	4786	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACCACGTAATAGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	79699568	79700605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79699600_79700600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002322	chr10	-	264	1	ISM	ENSMUSG00000013833.16	ENSMUST00000105378.9	3197	15	13950	0	12662	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTGTCACCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	79730805	79730541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79730500_79730800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002323	chr10	-	318	2	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	13223	207	11958	134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCATATCCAAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79731509	79730975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79731245_79731460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002324	chr10	-	296	2	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	12334	697	11069	-356	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGTGAGGAGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	79732398	79731465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79731545_79732181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002325	chr10	-	294	2	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	12064	1412	10799	-1071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCACTGCCCCTCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	79732668	79732180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79732399_79732592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002326	chr10	-	413	3	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	10573	1828	9308	-1487	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGAGGCACTATCATA	NA	NA	NA	NA	NA	NA	NA	NA	79734159	79732596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79732786_79733398_79733533_79734069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002327	chr10	-	395	2	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	9512	3960	8247	-3619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTGACAGGTGGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	79735220	79734728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79734938_79735034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002328	chr10	-	286	2	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	8645	4346	7380	-4005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCTGCCGTACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	79736087	79735114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79735244_79735930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002329	chr10	-	454	3	ISM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	5640	5232	4375	-4891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCCATCTCACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	79739092	79736000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79736087_79738256_79738363_79738830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002330	chr10	-	354	2	ISM	ENSMUSG00000013833.16	ENST00000269814.8	638	5	698	7970	698	-7970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGAGTGGCGCTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	79742769	79739079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79739263_79742598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002331	chr10	-	379	3	ISM	ENSMUSG00000013833.16	ENST00000269814.8	638	5	42	11489	42	-11489	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGTACCACTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	79743425	79742598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79742769_79742872_79742981_79743324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002332	chr10	-	312	3	ISM	ENSMUSG00000013833.16	ENSMUST00000105378.9	3197	15	44	12350	21	-11782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTGGGACCAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	79744711	79742891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79742981_79743324_79743488_79744651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002333	chr10	-	1033	1	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	5922	0	5922	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79746918	79745885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79745900_79746900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002334	chr10	-	1472	6	ISM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	3664	83	3664	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCCTCCTTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	79749176	79745968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002335	chr10	+	1876	4	ISM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	6193	1218	6193	-1218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAAAGAGTGCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	79802178	79804819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79802304_79802393_79802561_79803153_79803223_79803304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002336	chr10	+	1528	1	Genic_Genomic	ENSMUSG00000035754.9	novel	NA	NA	NA	NA	8531	7	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTACTTTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	79804516	79806044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_79804500_79806000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002337	chr10	+	739	6	ISM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	14	2483	14	-916	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCCCGGCGCCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79824431	79829413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002338	chr10	+	532	5	NNC	ENSMUSG00000004665.11	novel	699	6	NA	NA	11	-966	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCATCAGCCTCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	79827203	79829363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79827316_79828106_79828174_79828280_79828415_79829047_79829165_79829261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002339	chr10	+	1010	5	ISM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	3689	1171	914	207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGGCTGTGGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79828106	79830725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002340	chr10	+	490	5	ISM	ENSMUSG00000004665.11	ENST00000529222.1	699	6	931	69	931	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCCCTGCAGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	79828123	79830260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79828174_79828314_79828415_79829047_79829165_79829261_79829409_79830184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002341	chr10	+	344	3	ISM	ENSMUSG00000004665.11	ENST00000565096.6	963	7	3769	1139	1080	-950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGGCACCAACAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79828272	79829379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79828382_79829047_79829165_79829261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002342	chr10	+	735	4	ISM	ENSMUSG00000004665.11	ENST00000562958.6	1035	7	3813	0	1124	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGAAACTGGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	79828316	79830518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79828426_79829019_79829165_79829261_79829409_79830184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002343	chr10	+	531	2	NNC	ENSMUSG00000004665.11	novel	926	6	NA	NA	2068	60	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCAGCTTCCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	79829260	79830578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79829398_79830184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002344	chr10	+	540	2	NNC	ENSMUSG00000004665.11	novel	926	6	NA	NA	2075	186	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTGAGGCTGTGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79829267	79830704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79829288_79830184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002345	chr10	+	250	1	ISM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	5851	1378	3076	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGGAAACTGGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	79830268	79830518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79830300_79830500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002346	chr10	+	604	1	Genic_Genomic	ENSMUSG00000004665.11	novel	NA	NA	NA	NA	4102	2	mono-exon	FALSE	NA	NA	NA	NA	NA	610	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCACACGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	79831294	79831898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_79831300_79831900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002347	chr10	-	1138	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGCAATCCTAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	79875618	79871781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002348	chr10	+	638	5	ISM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	1	498	1	-453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGGTAAGTGGCATACA	NA	NA	NA	NA	NA	NA	NA	NA	79889322	79891775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002349	chr10	+	549	4	NNC	ENSMUSG00000075706.12	novel	809	6	NA	NA	-52	-1279	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGAGTGGCCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	79889381	79890949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79889550_79890347_79890443_79890533_79890679_79890808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002350	chr10	+	695	5	ISM	ENSMUSG00000075706.12	ENST00000589115.6	809	6	913	-1	48	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGAAATGTGCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79890346	79892261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79890443_79890533_79890679_79890801_79890954_79891873_79891934_79892019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002351	chr10	+	733	6	FSM	ENSMUSG00000075706.12	ENSMUST00000183037.3	735	6	48	-46	48	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGTCTTTGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	79890346	79892274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002352	chr10	+	385	2	ISM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	808	5793	808	-5786	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGGTGGAGTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79952444	79960723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79952742_79960635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002353	chr10	+	357	2	ISM	ENSMUSG00000003068.18	ENSMUST00000105370.8	1474	8	2527	613	2527	-613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATCCGCCGGCTCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	79963735	79965896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79963935_79965738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002354	chr10	+	391	2	ISM	ENSMUSG00000003068.18	ENSMUST00000105370.8	1474	8	4582	184	4582	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATATGGAGCAGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	79965790	79966325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79965946_79966089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002355	chr10	+	345	1	ISM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	14535	0	4963	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGGGCTGTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79966171	79966516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79966200_79966500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002356	chr10	+	698	2	ISM	ENSMUSG00000003072.16	ENSMUST00000105367.8	1410	5	0	3285	0	-3284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGCCGAGGCCGCCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	79977290	79978362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79977501_79977874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002357	chr10	-	681	2	Antisense	novelGene_ENSMUSG00000003072.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGGCCAAGGGGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	79978348	79977292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_-_79977498_79977872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002358	chr10	+	1160	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	-228	-1	-228	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTTCTAACTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	79977920	79981653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002359	chr10	+	907	4	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79978168	79981652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79978441_79979665_79979820_79981052_79981142_79981260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002360	chr10	+	862	4	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79978209	79981652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79978441_79979665_79979812_79981052_79981142_79981256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002361	chr10	+	847	4	NNC	ENSMUSG00000003072.16	novel	931	4	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79978231	79981652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_79978441_79979665_79979826_79981059_79981142_79981256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002362	chr10	+	508	2	ISM	ENSMUSG00000003072.16	ENSMUST00000105366.2	781	3	1458	40	1458	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTTACCCAGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	79979661	79981606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_79979820_79981256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002363	chr10	+	399	1	NIC	ENSMUSG00000003072.16	novel	931	4	NA	NA	3049	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTGTTTCTAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79981252	79981651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_79981300_79981700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002364	chr10	+	562	5	ISM	ENSMUSG00000045193.14	ENST00000586773.5	644	6	1926	-2	1926	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGCTCCAAGGATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80005591	80006602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002365	chr10	+	1062	5	ISM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	2249	0	2195	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	80005860	80007489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002366	chr10	+	692	3	ISM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	2637	145	2583	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGGAAATGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	80006248	80007344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80006341_80006527_80006599_80006815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002367	chr10	+	677	1	Genic_Genomic	ENSMUSG00000045193.14	novel	NA	NA	NA	NA	3148	1	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTCTGACCATTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	80006813	80007490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_80006800_80007500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002368	chr10	+	593	3	FSM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	85	0	85	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGTCCTGGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80008862	80010980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80009009_80010042_80010160_80010650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002369	chr10	+	333	1	Genic_Genomic	ENSMUSG00000035595.7	novel	NA	NA	NA	NA	1871	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGTCCTGGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80010648	80010981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_80010600_80011000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002370	chr10	+	1616	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	265	250	265	-250	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAAAAATACAGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	80015580	80025594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002371	chr10	+	293	3	ISM	ENSMUSG00000020153.15	ENSMUST00000105364.8	983	9	8	4360	8	-4359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTCGCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80084962	80088267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80085039_80085145_80085326_80088230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002372	chr10	+	255	2	NNC	ENSMUSG00000020153.15	novel	983	9	NA	NA	13	-7301	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAAGCCCTTGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	80084967	80085325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80085043_80085145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002373	chr10	+	432	4	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	-146	3008	-146	-3008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCTCGTGTCAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	80085139	80089618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002374	chr10	+	257	2	NNC	ENSMUSG00000020153.15	novel	758	8	NA	NA	-120	-3646	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGAGCAGGTAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	80085165	80088980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80085326_80088883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002375	chr10	+	422	4	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	2953	1768	2953	-1768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCCCCTTGGCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	80088238	80090858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80088268_80088907_80088992_80089493_80089618_80090673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002376	chr10	+	327	3	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	4236	1652	4236	-1652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCTCAGACGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	80089521	80090974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80089618_80090673_80090854_80090923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002377	chr10	+	484	4	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	5379	-2	5379	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTCTGTGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	80090664	80092628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80090854_80090923_80090971_80091757_80091847_80092469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002378	chr10	+	165	1	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	7177	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	80092462	80092627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_80092500_80092600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002379	chr10	-	981	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGTTGGCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	80096839	80093984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002380	chr10	+	505	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTTTTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128282	80129949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002381	chr10	+	468	3	NNC	ENSMUSG00000063457.15	novel	572	3	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTTTTTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128606	80129949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128695_80129475_80129711_80129804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002382	chr10	+	466	3	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128607	80129948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128695_80129479_80129711_80129800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002383	chr10	+	473	3	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128607	80129948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128695_80129475_80129718_80129804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002384	chr10	+	453	3	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128608	80129948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128695_80129475_80129699_80129804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002385	chr10	+	308	3	FSM	ENSMUSG00000063457.15	ENST00000591804.6	383	3	4	71	4	-71	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAACCCGTGAAGCACGG	NA	NA	NA	NA	NA	NA	NA	NA	80128611	80129842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80128643_80129475_80129711_80129800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002386	chr10	+	434	3	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128627	80129948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128695_80129491_80129711_80129800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002387	chr10	+	429	3	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	29	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128636	80129948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80128695_80129475_80129699_80129800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002388	chr10	+	750	2	ISM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	7211	4455	7211	-4455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCCAGGGTGGCCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	80144867	80147474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80145010_80146866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002389	chr10	+	723	1	ISM	ENSMUSG00000020135.14	ENSMUST00000105359.8	9173	15	19396	2168	13550	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAATGCTCTGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	80151206	80151929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80151200_80151900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002390	chr10	-	334	1	ISM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	1950	0	1950	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGGCTCGCTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	80154421	80154087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80154100_80154400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002391	chr10	-	526	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	99	1024	99	-1024	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCCCAACCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	80156272	80155111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80155382_80156016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002392	chr10	-	780	3	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	6584	-6	6584	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCGCCCCTCACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	80177662	80176668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80177291_80177422_80177495_80177576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002393	chr10	-	1317	1	ISM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	5988	0	5988	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCGTTCGCGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	80217505	80216188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80216200_80217500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002394	chr10	-	454	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	-8	-1	-8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCTTCCTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	80242672	80238829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80238990_80239969_80240121_80242529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002395	chr10	-	431	3	NNC	ENSMUSG00000020163.13	novel	445	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	80242661	80238830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_80238990_80239969_80240110_80242529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002396	chr10	-	548	1	Genic_Genomic	ENSMUSG00000020167.15	novel	NA	NA	NA	NA	20952	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGGCCTGGCACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	80245894	80245346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_80245300_80245900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002397	chr10	-	1083	3	ISM	ENSMUSG00000020167.15	ENSMUST00000105341.8	2451	18	17684	-77	17684	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTGTTGATCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	80249162	80245376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80246109_80246231_80246459_80249038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002398	chr10	-	822	4	NNC	ENSMUSG00000020167.15	novel	2611	20	NA	NA	17674	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTTTCTAGAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	80249172	80245442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_80245758_80245962_80246109_80246231_80246459_80249038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002399	chr10	-	685	3	NNC	ENSMUSG00000020167.15	novel	2611	20	NA	NA	20384	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTTTCTAGAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	80246462	80245442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_80245758_80245969_80246109_80246231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002400	chr10	-	247	2	ISM	ENSMUSG00000020167.15	ENSMUST00000105339.8	2096	18	18081	149	18011	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACAGCTGGCCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	80248835	80246036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80246109_80248660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002401	chr10	-	727	5	ISM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	17705	769	15082	-341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGCCCGCCCCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80251764	80246228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002402	chr10	-	247	2	ISM	ENSMUSG00000020167.15	ENSMUST00000105339.8	2096	18	17744	2896	17674	-123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTAAGGAGCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	80249172	80248783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80248897_80249038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002403	chr10	-	499	5	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	16990	452	14373	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAGGAAATCGCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	80252473	80249112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002404	chr10	-	509	5	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	16156	3026	13539	-3026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTTCCCTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	80253307	80251686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002405	chr10	-	481	5	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	14116	4276	11499	-4276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTCCTAGGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	80255347	80252936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002406	chr10	-	497	5	ISM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	13534	4508	10917	-4508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCAGCAGGATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	80255929	80253168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002407	chr10	-	649	5	ISM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	3	11474	0	-8256	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCCACCCTGTGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	80269471	80256916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80257001_80257165_80257240_80263504_80263578_80266770_80266871_80269153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002408	chr10	-	2102	1	NIC	ENSMUSG00000035397.9	novel	2674	2	NA	NA	8096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCTTCTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80405059	80402957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_80403000_80405100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002409	chr10	-	2146	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	1	527	1	-527	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATCTTCCATCATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	80413154	80403484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80405057_80412580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002410	chr10	-	857	4	FSM	ENSMUSG00000003346.15	ENST00000590661.1	851	4	-2	-4	-2	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGGGACCTCAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	80422693	80419666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80419898_80419976_80420117_80421441_80421583_80422348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002411	chr10	-	823	4	NNC	ENSMUSG00000003346.15	novel	851	4	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGCAGGGACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80422670	80419670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_80419898_80419976_80420117_80421441_80421583_80422355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002412	chr10	-	1273	4	ISM	ENSMUSG00000003346.15	ENST00000250974.9	1349	5	3216	0	-173	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTGCAGGGACCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80422864	80419670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80419898_80419976_80420157_80421441_80421792_80422348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002413	chr10	-	728	2	NNC	ENSMUSG00000003346.15	novel	1349	5	NA	NA	-33	-1769	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTCTGCTTTTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	80422724	80421439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_80421799_80422355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002414	chr10	+	1805	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80438713	80451618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002415	chr10	+	1203	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	2	206	2	-206	multi-exon	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCCTCACCCTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	80438715	80443282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80438784_80442147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002416	chr10	+	1183	1	ISM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	3592	0	3592	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCGTTTGCACTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	80442305	80443488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80442300_80443500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002417	chr10	+	777	2	ISM	ENSMUSG00000003345.17	ENSMUST00000085435.7	1825	12	10162	-404	10162	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAATGTTGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80475651	80476575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80475709_80475855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002418	chr10	+	720	1	ISM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	17184	0	10366	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAATGTTGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80475855	80476575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80475900_80476600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002419	chr10	-	125	1	Genic_Genomic	ENSMUSG00000003344.15	novel	NA	NA	NA	NA	13754	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTATGTTGTCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80478574	80478449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_80478400_80478600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002420	chr10	-	164	2	ISM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	11076	2094	11076	-2094	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATCGACCGGCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	80481252	80480544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80480630_80481173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002421	chr10	-	166	2	ISM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	10011	2858	10011	-2858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGCGCTGGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	80482317	80481308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80481372_80482214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002422	chr10	-	159	2	ISM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	323	5946	323	-5946	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTACGTGTCCAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80492005	80484396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80484514_80491963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002423	chr10	-	1639	1	ISM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	9328	0	5011	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	80502799	80501160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80501200_80502800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002424	chr10	-	1685	2	ISM	ENSMUSG00000020190.14	ENSMUST00000003433.11	3065	12	4324	356	4324	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGCTGTTGGCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	80503486	80501521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80503167_80503446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002425	chr10	-	1332	1	Genic_Genomic	ENSMUSG00000003348.11	novel	NA	NA	NA	NA	15272	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGGCTGCTCCTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80522417	80521085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_80521100_80522400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002426	chr10	-	1944	3	ISM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	10343	624	10343	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTTGGGATTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	80527346	80521710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80523008_80525685_80525889_80526902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002427	chr10	-	639	1	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	34670	0	34670	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	80543428	80542789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80542800_80543400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002428	chr10	-	712	3	ISM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	22499	10742	22499	-10742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCTGCAAACTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	80555599	80553531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80553765_80554842_80555223_80555500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002429	chr10	-	477	6	FSM	ENSMUSG00000035278.10	ENST00000587394.6	477	6	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAGCCACCAAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80634007	80630005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80630100_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002430	chr10	-	1258	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCGGAATGAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80634457	80631931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002431	chr10	-	466	4	FSM	ENSMUSG00000035278.10	ENST00000586608.3	467	4	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTGCCTAAGGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	80634061	80632306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80632357_80632424_80632489_80633606_80633812_80633914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002432	chr10	-	404	1	ISM	ENSMUSG00000020216.14	ENSMUST00000020435.11	955	5	2986	0	2986	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATCTACTCCTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	80644733	80644329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80644300_80644700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002433	chr10	-	1081	6	ISM	ENSMUSG00000020216.14	ENSMUST00000181039.8	1108	7	1074	-2	-533	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATCTACTCCTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	80648252	80644329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80644874_80644979_80645063_80646009_80646199_80646297_80646401_80647900_80647939_80648128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002434	chr10	+	1046	5	FSM	ENSMUSG00000035242.16	ENST00000602676.6	953	5	4	-97	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80662518	80665124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002435	chr10	+	529	3	NNC	ENSMUSG00000035242.16	novel	953	5	NA	NA	3	-372	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCCACTTCCCCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	80662522	80664467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80662740_80664070_80664210_80664294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002436	chr10	+	915	5	FSM	ENSMUSG00000035242.16	ENST00000582888.8	916	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTGTTTAAGATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	80662529	80665010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002437	chr10	+	545	3	NNC	ENSMUSG00000035242.16	novel	1071	6	NA	NA	1904	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80664432	80665124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80664468_80664544_80664635_80664704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002438	chr10	+	423	1	FSM	ENSMUSG00000087993.3	ENSMUST00000157368.3	74	1	72	-421	72	421	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTTGTGTCCTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	80664702	80665125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80664700_80665100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002439	chr10	-	898	1	ISM	ENSMUSG00000035215.10	ENSMUST00000220225.2	1129	3	1491	0	1491	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCTGTAACTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	80689552	80688654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80688700_80689600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002440	chr10	-	469	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTCTGTAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	80691043	80688657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002441	chr10	+	899	7	FSM	ENSMUSG00000035206.11	ENST00000618220.4	904	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTCCCAGGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	80697175	80699996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80697297_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002442	chr10	+	345	3	NNC	ENSMUSG00000059406.9	novel	3303	17	NA	NA	10	-15552	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGGACCTCTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	80715654	80719622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_80715798_80718468_80718601_80719552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002443	chr10	+	363	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	3943	13161	3943	-13161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGTCTGTGTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80719587	80722013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80719621_80719776_80719953_80721859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002444	chr10	+	409	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	4225	11785	4225	-11785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCACCTGGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	80719869	80723389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80719953_80721859_80722014_80723217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002445	chr10	+	449	2	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	7571	10780	7571	-10780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCCGCCGCGTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	80723215	80724394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80723390_80724119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002446	chr10	+	638	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	8475	8937	8475	-8937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAGAGCTGGGCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	80724119	80726237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80724395_80725163_80725301_80726011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002447	chr10	+	735	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	10395	6083	10395	-6083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGGTCCCAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	80726039	80729091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80726331_80727990_80728163_80728819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002448	chr10	+	715	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	13175	4233	13175	-4233	internal_fragment	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCACTCAACACAACACT	NA	NA	NA	NA	NA	NA	NA	NA	80728819	80730941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80729092_80730124_80730262_80730635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002449	chr10	+	738	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	15095	1233	15095	-1233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACGCATGCGTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80730739	80733941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80731042_80733031_80733204_80733677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002450	chr10	+	562	3	ISM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	18033	0	18033	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCTGTGGCTAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	80733677	80735174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80733941_80734018_80734156_80735012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002451	chr10	-	1225	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCCCATCGGACTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	80736803	80735283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_80736094_80736315_80736385_80736457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002452	chr10	-	814	1	NIC	ENSMUSG00000020219.8	novel	1225	3	NA	NA	521	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCCCATCGGACTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	80736097	80735283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_80735300_80736100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002453	chr10	-	1256	3	ISM	ENSMUSG00000062075.14	ENSMUST00000105332.3	1643	9	2846	-925	2846	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGCACAGCTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	80739400	80737706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80738735_80739045_80739157_80739283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002454	chr10	+	1283	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	80765907	80768038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002455	chr10	-	737	1	ISM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	8152	0	4638	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTTTTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	80865108	80864371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80864400_80865100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002456	chr10	-	611	1	ISM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	15493	0	15482	0	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTCTGCTTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80880519	80879908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80879900_80880500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002457	chr10	-	1046	6	ISM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	11201	335	11190	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGTCATCCTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	80884811	80880245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002458	chr10	-	522	3	NNC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	13614	-611	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGAGTAGCTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	80882387	80880521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_80880838_80882023_80882147_80882304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002459	chr10	-	131	1	NIC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	13847	4	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCCCCATCGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80882154	80882023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_80882000_80882200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002460	chr10	-	300	3	ISM	ENSMUSG00000004937.7	ENST00000221566.7	1007	11	10807	2196	10807	-2196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACCATGGTAGGCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	80885194	80884223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80884277_80884671_80884811_80885086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002461	chr10	-	268	3	ISM	ENSMUSG00000004937.7	ENST00000221566.7	1007	11	10284	2722	10284	-2722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGGACCCTGACAACGA	NA	NA	NA	NA	NA	NA	NA	NA	80885717	80884749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80884811_80885086_80885192_80885615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002462	chr10	-	510	5	ISM	ENSMUSG00000004937.7	ENST00000221566.7	1007	11	7914	3084	7914	-3084	internal_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAAGGCCTATGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	80888087	80885111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002463	chr10	-	293	3	ISM	ENSMUSG00000004937.7	ENST00000676984.1	913	10	7940	3605	7927	-3605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTACTTCTGTAACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	80888074	80885632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80885716_80886832_80886918_80887949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002464	chr10	-	199	2	NNC	ENSMUSG00000004937.7	novel	913	10	NA	NA	7929	-4811	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAAGGTGAGGGAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	80888072	80886838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_80886915_80887949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002465	chr10	-	173	2	ISM	ENSMUSG00000004937.7	ENST00000676984.1	913	10	2	5921	0	-5921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGGGCTGCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	80896012	80887948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80888071_80895961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002466	chr10	+	505	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	5	6996	5	-6996	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCAGCCAGCACAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80905873	80911397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80906113_80908986_80909200_80911344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002467	chr10	+	422	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	3111	5564	3111	-5564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATCAAGCTGGGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	80908979	80912829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80909200_80911344_80911494_80912776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002468	chr10	+	597	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	8503	2321	8503	-2321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATGGGGCCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80914371	80916072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80914465_80915291_80915428_80915704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002469	chr10	+	559	2	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	9847	1944	9847	-1944	internal_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGGCCCGCGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	80915715	80916449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80916072_80916246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002470	chr10	+	517	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	10382	1121	10382	-1121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCACACTGCAGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80916250	80917272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80916449_80916860_80917048_80917140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002471	chr10	+	644	3	ISM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	11270	320	11270	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTGCTCTGCCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80917138	80918073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80917270_80917433_80917571_80917697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002472	chr10	+	407	1	Genic_Genomic	ENSMUSG00000004929.13	novel	NA	NA	NA	NA	12122	4	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGACAGTGAGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	80917990	80918397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_80918000_80918400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002473	chr10	+	843	4	ISM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	15095	-402	15095	402	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACACAGAGAGATACAC	NA	NA	NA	NA	NA	NA	NA	NA	80956875	80960119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80956945_80957736_80957799_80958400_80958447_80959453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002474	chr10	+	767	1	Genic_Genomic	ENSMUSG00000035027.19	novel	NA	NA	NA	NA	17985	1	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGACTTTTTGTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	80959765	80960532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_80959800_80960500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002475	chr10	+	1568	2	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	91	7031	91	-3252	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCTGTAAAGTTCGATT	NA	NA	NA	NA	NA	NA	NA	NA	80972195	80981025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80972534_80979795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002476	chr10	+	2759	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	9	-927	9	912	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAACACGAAGGCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	80972391	80985204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_80972494_80979795_80981052_80983803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002477	chr10	+	385	1	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	11820	3747	10138	17	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAGAACAGAGAGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	80983924	80984309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80983900_80984300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002478	chr10	+	1458	1	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	14494	0	12812	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGCCTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80986598	80988056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_80986600_80988100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002479	chr10	-	200	1	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	14458	0	14458	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGGTTTCTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	80989299	80989099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80989100_80989300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002480	chr10	-	189	2	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	13344	1050	13344	-1050	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTGGCCCAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80990413	80990149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80990207_80990281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002481	chr10	-	293	2	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	12172	1181	12172	-1181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCCTGCACACAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	80991585	80990280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80990413_80991424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002482	chr10	-	344	3	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	10804	2324	10804	-2324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGGACCTGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80992953	80991423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80991586_80991666_80991741_80992845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002483	chr10	-	218	2	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	10583	3748	10583	-3748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGAGTGAGTGGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80993174	80992847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80992952_80993060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002484	chr10	-	261	3	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	10232	3961	10232	-3961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCACCTGCTCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	80993525	80993060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80993190_80993270_80993362_80993484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002485	chr10	-	241	2	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	3984	4666	3984	-4666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCCCAGCAGGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	80999773	80993765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_80993852_80999618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002486	chr10	-	409	2	ISM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	28	10727	28	-10727	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCACCACGGCCCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	81003729	80999826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81000025_81003518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002487	chr10	+	709	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	0	3605	0	-3605	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAAGCTCTTCTATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	81012464	81014727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002488	chr10	+	807	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	1017	3237	1017	-3237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACATGGCTGTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	81013481	81015095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81013714_81013886_81014069_81014514_81014727_81014914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002489	chr10	+	619	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	1485	3044	1485	-3044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGCTGTGGTCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	81013949	81015288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81014069_81014514_81014727_81014914_81015094_81015179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002490	chr10	+	753	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2052	2697	2052	-2697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTAGGGGCTCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	81014516	81015635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81014727_81014914_81015094_81015179_81015286_81015377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002491	chr10	+	703	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2481	2421	2481	-2421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCACTGGCCTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	81014945	81015911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81015094_81015179_81015286_81015377_81015631_81015715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002492	chr10	+	777	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	2753	2086	2753	-2086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCACTAGGTCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	81015217	81016246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81015286_81015377_81015631_81015715_81015912_81015986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002493	chr10	+	632	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3097	1826	3097	-1826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCACCAGAATGGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	81015561	81016506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81015631_81015715_81015912_81015986_81016246_81016398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002494	chr10	+	857	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3312	1340	3312	-1340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGACTCAGCATTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	81015776	81016992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81015912_81015986_81016246_81016398_81016507_81016637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002495	chr10	+	506	3	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	3668	-1404	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTACCTGAATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	81016132	81016928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_81016240_81016398_81016507_81016637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002496	chr10	+	517	3	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	3686	-1383	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACAGTGTGGTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	81016150	81016949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_81016248_81016398_81016507_81016637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002497	chr10	+	650	3	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	3931	1086	3931	-1086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGTATCTTAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81016395	81017246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81016507_81016637_81016992_81017061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002498	chr10	+	1231	4	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	4154	68	4154	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTAGACTTGCAGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	81016618	81018264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81016992_81017061_81017245_81017326_81017460_81017722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002499	chr10	-	522	2	Antisense	novelGene_ENSMUSG00000034994.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGATTTCTGTGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	81017244	81016646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_-_81016984_81017059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002500	chr10	+	514	3	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	4318	-888	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGAGTCCTTTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	81016782	81017444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_81016996_81017061_81017245_81017326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002501	chr10	+	566	1	Genic_Genomic	ENSMUSG00000034994.11	novel	NA	NA	NA	NA	5304	2	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGCAACTCTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	81017768	81018334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_81017800_81018300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002502	chr10	+	528	1	ISM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	9665	0	8752	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAAAGGACACACTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	81028503	81029031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81028500_81029000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002503	chr10	-	1283	1	Genic_Genomic	ENSMUSG00000004939.8	novel	NA	NA	NA	NA	2604	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTCTTCTTTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	81035281	81033998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_81034000_81035300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002504	chr10	-	609	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	-2	-3	-2	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATGCCCTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	81102770	81100543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_81100832_81101484_81101642_81102606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002505	chr10	-	574	3	NNC	ENSMUSG00000034932.5	novel	604	3	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCATGCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81102746	81100546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_81100832_81101484_81101634_81102606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002506	chr10	+	815	2	ISM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	16	3785	16	-3775	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATAGTGCTCGCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	81104021	81105295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81104154_81104612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002507	chr10	+	712	2	ISM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	620	3660	620	-3650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCCATTTTTACACAG	NA	NA	NA	NA	NA	NA	NA	NA	81104625	81105420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81105296_81105378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002508	chr10	+	1234	3	ISM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	21082	1149	21040	569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGGCTTCCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	81149878	81154657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81149928_81150825_81150953_81153599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002509	chr10	+	1099	1	ISM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	25911	0	25869	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	81154707	81155806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81154700_81155800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002510	chr10	-	857	4	ISM	ENSMUSG00000020232.18	ENSMUST00000122993.8	1502	9	2680	-5	2680	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATATTTGTGGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	81183345	81181879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002511	chr10	-	430	1	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	3711	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	81182314	81181884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_81181900_81182300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002512	chr10	-	434	3	ISM	ENSMUSG00000020232.18	ENSMUST00000122993.8	1502	9	703	2445	703	-2444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAGCCAGGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	81185322	81184329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81184451_81184719_81184924_81185213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002513	chr10	-	570	3	ISM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	12	2857	12	-2856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGCCGGCAGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	81186246	81184741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81184924_81185213_81185323_81185967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002514	chr10	-	300	1	Genic_Genomic	ENSMUSG00000020235.17	novel	NA	NA	NA	NA	4895	3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTGTTGCTGTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	81202352	81202052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_81202100_81202400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002515	chr10	-	452	3	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	3181	-215	3181	215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCCATATTGGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	81204066	81203127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81203385_81203474_81203568_81203964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002516	chr10	-	297	2	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	2655	666	2655	-666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCCAAGCTCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	81204592	81204008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81204070_81204356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002517	chr10	-	398	2	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	2154	1036	2154	-1036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAGCACGCCAATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	81205093	81204378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81204591_81204907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002518	chr10	-	338	3	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	1397	1561	1397	-1561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGCGTCACCCCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	81205850	81204903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81205093_81205171_81205275_81205804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002519	chr10	-	356	3	ISM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	8133	3115	1030	-1828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGACCCGCCTGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	81206217	81205170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81205275_81205804_81205871_81206031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002520	chr10	-	462	4	ISM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	7498	3973	395	-2686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCCAAGCACCCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	81206852	81206028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81206216_81206298_81206382_81206530_81206659_81206788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002521	chr10	-	414	4	ISM	ENSMUSG00000020235.17	ENSMUST00000118812.2	1215	11	-45	3206	-45	-3206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGGGCTCTTTACGGT	NA	NA	NA	NA	NA	NA	NA	NA	81207292	81206548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81206659_81206788_81206853_81206928_81207055_81207178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002522	chr10	-	299	2	ISM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	48	5133	48	-3846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCTGTGTGAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	81214302	81207188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81207289_81214103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002523	chr10	+	1429	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81220276	81224186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002524	chr10	+	1133	4	NNC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	101	-151	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACCAGCAGAGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	81221555	81224035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_81221882_81222252_81222324_81223073_81223315_81223540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002525	chr10	+	569	2	FSM	ENSMUSG00000114004.2	ENSMUST00000156229.3	621	2	189	-137	189	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCTTCTGTGATACTG	NA	NA	NA	NA	NA	NA	NA	NA	81226333	81227106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_81226419_81226622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002526	chr10	-	1292	1	Genic_Genomic	ENSMUSG00000055053.19	novel	NA	NA	NA	NA	29638	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTTCTTCCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	81233310	81232018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_81232000_81233300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002527	chr10	-	1434	2	ISM	ENSMUSG00000055053.19	ENSMUST00000105321.10	6237	9	22178	3638	22105	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAAACACTAAGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	81240843	81235657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81236906_81240657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002528	chr10	-	1302	1	ISM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	8842	0	8776	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACCAGAACCCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	81323384	81322082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81322100_81323400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002529	chr10	-	1591	4	ISM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	8033	64	7967	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGGGACATGCCACACG	NA	NA	NA	NA	NA	NA	NA	NA	81324193	81322146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002530	chr10	-	262	2	ISM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	47	7021	47	-7021	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGCGTGCTTATGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	81332113	81329311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81329374_81331913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002531	chr10	-	1653	1	Genic_Genomic	ENSMUSG00000034781.6	novel	NA	NA	NA	NA	14815	1	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTTGTGATTATTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	81366209	81364556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_81364600_81366200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002532	chr10	-	1907	3	ISM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	13740	638	13740	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAGCCGGCAAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	81367284	81365195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81366820_81366925_81367080_81367155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002533	chr10	+	1141	5	ISM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	4598	0	4598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	81399925	81402196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002534	chr10	+	1138	5	NNC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	4598	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	81399925	81402196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002535	chr10	+	934	6	ISM	ENSMUSG00000034771.16	ENST00000443826.7	2010	17	7018	2537	7018	-2537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGGGGCGGCCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	81418655	81423634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81418721_81420436_81420576_81422046_81422208_81422691_81422763_81422925_81423176_81423386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002536	chr10	+	870	5	ISM	ENSMUSG00000034771.16	ENST00000443826.7	2010	17	11053	1377	11053	-1377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGCCTGGGAGACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	81422690	81424794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002537	chr10	+	874	5	ISM	ENSMUSG00000034771.16	ENST00000443826.7	2010	17	11288	841	11288	-841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTGGTCTCCCCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	81422925	81425330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81423176_81423386_81423635_81423707_81423856_81424642_81424794_81425253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002538	chr10	+	2182	2	ISM	ENSMUSG00000096795.5	ENSMUST00000085664.6	1800	3	325	-508	325	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATACTGCCATCCATT	NA	NA	NA	NA	NA	NA	NA	NA	81555077	81557810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_81555140_81555690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002539	chr10	+	2122	1	NIC	ENSMUSG00000096795.5	novel	2384	4	NA	NA	936	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATACTGCCATCCATT	NA	NA	NA	NA	NA	NA	NA	NA	81555688	81557810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_81555700_81557800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002540	chr10	-	475	2	NNC	ENSMUSG00000094622.3	novel	720	2	NA	NA	1314	441	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAAATAAACCTTATGAG	NA	NA	NA	NA	NA	NA	NA	NA	81582023	81581375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_81581663_81581835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002541	chr10	-	707	2	FSM	ENSMUSG00000096718.3	ENST00000351773.7	762	2	55	0	55	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCAAGCAATGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	81741244	81740364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_81740753_81740925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002542	chr10	-	409	1	ISM	ENSMUSG00000096718.3	ENSMUST00000219144.2	4067	4	25541	2620	526	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCAAGCAATGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	81740773	81740364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_81740400_81740800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002543	chr10	-	668	1	ISM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	15756	0	15756	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATGTTGTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	82061351	82060683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_82060700_82061400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002544	chr10	-	763	2	ISM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	13679	1045	13679	-1045	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAGTGTGGTAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	82063428	82061728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_82062428_82063364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002545	chr10	+	506	5	FSM	ENSMUSG00000073427.5	ENSMUST00000211099.2	490	5	4	-20	4	20	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACATCTTCTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82190092	82236700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82219596_82219679_82236587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002546	chr10	-	119	1	ISM	ENSMUSG00000063320.12	ENSMUST00000176200.8	586	2	2957	0	2957	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTATACATTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	82455803	82455684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_82455700_82455800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002547	chr10	-	406	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGGGCTCAATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	82459022	82455857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_82456052_82458541_82458659_82458927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002548	chr10	+	2521	3	ISM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	17363	-1	17363	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGCTAACTTGTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	82483055	82486634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_82483228_82483786_82483913_82484411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002549	chr10	+	1747	1	ISM	ENSMUSG00000034674.19	ENSMUST00000092266.11	2959	10	18750	0	18719	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTAGTATACAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	82484411	82486158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_82484400_82486200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002550	chr10	+	898	2	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	39985	524	39985	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTAAAAATACTGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	82574825	82577738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_82575100_82577114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002551	chr10	+	670	1	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	42752	0	42752	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGGTATTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	82577592	82578262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_82577600_82578300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002552	chr10	-	1751	1	Genic_Genomic	ENSMUSG00000020248.19	novel	NA	NA	NA	NA	13694	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCCTTGCGTGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	82586284	82584533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_82584500_82586300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002553	chr10	-	1911	3	ISM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	12677	0	12677	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCCTTGCGTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	82587301	82584534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_82586282_82586571_82586652_82587217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002554	chr10	+	1156	3	ISM	ENSMUSG00000020250.12	ENSMUST00000219442.3	3531	14	26872	809	26872	296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACATTCACAGGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	82723006	82732735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_82723103_82726217_82726353_82731810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002555	chr10	+	948	1	Genic_Genomic	ENSMUSG00000020250.12	novel	NA	NA	NA	NA	36465	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCCTTCTGACTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	82732599	82733547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_82732600_82733500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002556	chr10	+	399	2	FSM	ENSMUSG00000034612.8	ENST00000546689.1	589	2	190	0	160	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCCCGGTCCTCGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	82821491	82927991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_82821802_82927902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002557	chr10	+	1186	3	ISM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	47007	-853	47007	853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAAATATACCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	83426883	83430956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_83427048_83427552_83427653_83430034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002558	chr10	+	1316	2	ISM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	50990	-5	50953	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTTCCATTGGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	83430829	83432345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_83431755_83431954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002559	chr10	-	549	1	ISM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	48157	0	48157	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83436445	83435896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_83435900_83436400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002560	chr10	+	368	2	FSM	ENSMUSG00000111524.2	ENSMUST00000213796.2	388	2	21	-1	21	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGTATCTGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	83928150	83932114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_83928274_83931869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002561	chr10	-	541	1	ISM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	7217	0	7191	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGGTTCTGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	84362709	84362168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_84362200_84362700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002562	chr10	-	694	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	199	2196	173	-1865	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACTGATGTCCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84369727	84364364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_84364642_84369310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002563	chr10	+	1159	3	ISM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	28334	0	28334	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAATCTTTTCATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84440823	84450223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_84440932_84444328_84444502_84449345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002564	chr10	+	576	3	FSM	ENSMUSG00000035620.16	ENST00000549643.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAACATTGAGGCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	84753540	84851221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_84753690_84827983_84828129_84850939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002565	chr10	+	1098	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	22	2496	22	315	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCAGATGTCTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	84938512	84950953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_84938862_84946662_84946730_84950271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002566	chr10	+	771	3	FSM	ENSMUSG00000060935.7	ENST00000547081.1	770	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAACTGCTGTGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	84939579	84950639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_84939916_84946662_84946730_84950271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002567	chr10	+	702	3	NNC	ENSMUSG00000060935.7	novel	770	3	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTAAACTGCTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	84939651	84950638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_84939920_84946662_84946730_84950271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002568	chr10	+	703	1	Genic_Genomic	ENSMUSG00000060935.7	novel	NA	NA	NA	NA	13168	1	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAATGTTTCATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84952747	84953450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_84952700_84953400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002569	chr10	-	1570	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTATTCCAAAACATCATA	NA	NA	NA	NA	NA	NA	NA	NA	84963893	84955295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_84956679_84962231_84962351_84963825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002570	chr10	+	747	1	FSM	ENSMUSG00000050490.8	ENSMUST00000079684.7	952	1	228	-23	228	23	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGGACATCAACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85149579	85150326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_85149600_85150300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002571	chr10	+	1993	4	ISM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	49354	0	49308	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACAGGAACTTGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	85483572	85495728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_85483658_85487470_85487540_85490341_85490456_85494003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002572	chr10	+	1727	1	NIC	ENSMUSG00000020042.16	novel	5788	17	NA	NA	59737	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACAGGAACTTGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	85494001	85495728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_85494000_85495700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002573	chr10	+	610	3	ISM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	13973	678	13973	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATACGGGTCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85721667	85724282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_85721783_85723086_85723193_85723893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002574	chr10	+	419	1	Genic_Genomic	ENSMUSG00000001785.14	novel	NA	NA	NA	NA	16850	3	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTCACTTTGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	85724544	85724963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_85724500_85725000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002575	chr10	-	602	1	FSM	ENSMUSG00000097692.3	ENSMUST00000190739.2	1889	1	1290	-3	1290	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTAGATTGGGAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	85856903	85856301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_85856300_85856900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002576	chr10	+	419	3	ISM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	363	5478	363	-5478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTACCTGCTGACAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	86136598	86179892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_86136839_86174236_86174320_86179796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002577	chr10	+	463	2	ISM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	44204	3439	44204	-3439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCGCCCCTACCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	86180439	86181931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_86180540_86181568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002578	chr10	+	416	1	ISM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	48719	0	48719	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGCTGTCTCTTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	86184954	86185370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_86185000_86185400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002579	chr10	+	556	1	Genic_Genomic	ENSMUSG00000097412.3	novel	NA	NA	NA	NA	3513	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATGTGTATGAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	86525265	86525821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_86525300_86525800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002580	chr10	+	766	6	FSM	ENSMUSG00000020053.19	ENST00000392904.5	765	6	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAAAGCTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	87694953	87766776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_87695007_87695192_87695275_87700592_87700750_87749480_87749663_87751159_87751212_87766536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002581	chr10	+	1344	4	FSM	ENSMUSG00000020053.19	ENSMUST00000121161.8	1344	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTTTAGGAGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	87696467	87766761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_87697248_87700592_87700750_87749480_87749663_87766536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002582	chr10	-	674	1	Genic_Genomic	ENSMUSG00000035365.16	novel	NA	NA	NA	NA	54837	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGTGGTTTATACTTA	NA	NA	NA	NA	NA	NA	NA	NA	87927966	87927292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_87927300_87928000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002583	chr10	+	1050	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	4	-2	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGTGTCTTAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88036958	88082022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002584	chr10	+	148	1	ISM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	44766	152	44688	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGGTTTGTTGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	88081720	88081868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_88081700_88081900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002585	chr10	-	674	1	ISM	ENSMUSG00000020057.3	ENSMUST00000020249.2	2807	7	33598	0	33449	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTCTCGGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	88159339	88158665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88158700_88159300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002586	chr10	-	939	4	FSM	ENSMUSG00000020057.3	ENST00000544152.5	936	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCATTAAACAAATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88192789	88160055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_88160648_88176381_88176525_88180505_88180574_88192653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002587	chr10	-	898	4	NNC	ENSMUSG00000020057.3	novel	936	4	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCATTAAACAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	88192758	88160057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_88160648_88176381_88176525_88180505_88180566_88192653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002588	chr10	-	5202	1	NIC	ENSMUSG00000060002.15	novel	4863	9	NA	NA	29203	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTAAAAGTAGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	88310577	88305375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_88305400_88310600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002589	chr10	-	2026	2	ISM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	27496	821	27444	-821	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGAAATCTTTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	88312336	88309499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88311399_88312209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002590	chr10	+	2078	6	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTCTTTAGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	88566931	88579957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577952_88578889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002591	chr10	+	2081	6	NNC	ENSMUSG00000060904.15	novel	2080	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88566932	88579956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577952_88578884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002592	chr10	-	473	1	ISM	ENSMUSG00000035189.18	ENST00000392979.7	3888	27	308160	0	307674	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTGAACTTCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	88785324	88784851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88784900_88785300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002593	chr10	-	621	2	ISM	ENSMUSG00000035189.18	ENST00000392979.7	3888	27	305225	377	304739	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTCTACATCACCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	88788259	88785228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88785638_88788047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002594	chr10	-	477	3	ISM	ENSMUSG00000035189.18	ENST00000392979.7	3888	27	302850	617	302364	-241	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATCACGCTGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	88790634	88785468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88785638_88788047_88788248_88790526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002595	chr10	-	442	4	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	285913	3288	285749	-2924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGATGATGTATGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88807249	88788151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88788248_88790526_88790633_88796443_88796564_88807129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002596	chr10	-	437	4	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	261934	33195	261770	-32831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTCTTCCTCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	88831228	88818058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88818151_88819616_88819654_88828736_88828902_88831085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002597	chr10	-	390	3	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	259139	43873	258975	-43509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGAGAGACAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	88834023	88828736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88828902_88831085_88831227_88833939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002598	chr10	-	442	5	ISM	ENSMUSG00000035189.18	ENSMUST00000182790.8	4018	27	232275	46222	232111	-45858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAAACTTTTCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	88860887	88831085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002599	chr10	-	357	4	ISM	ENSMUSG00000035189.18	ENSMUST00000181976.8	1410	8	144266	369	144266	-369	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGTTCTGTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88948732	88903962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88904094_88920408_88920454_88924054_88924156_88948652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002600	chr10	-	445	4	ISM	ENSMUSG00000035189.18	ENSMUST00000181976.8	1410	8	107825	45077	107825	-45077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAAATGGAGAAAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	88985173	88948670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88948812_88952727_88952865_88960981_88961087_88985111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002601	chr10	-	512	3	ISM	ENSMUSG00000035189.18	ENST00000392977.8	4016	28	14	176118	14	-57388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTCTCTCGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	89093505	88960981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_88961087_88985111_88985307_89093293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002602	chr10	-	5429	1	Genic_Genomic	ENSMUSG00000074802.12	novel	NA	NA	NA	NA	29692	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCCTAACTTTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	89250112	89244683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_89244700_89250100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002603	chr10	-	1199	3	ISM	ENSMUSG00000074802.12	ENST00000266754.9	2164	9	22403	282	22403	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTTCAAAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89257401	89249346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_89250355_89252881_89252990_89257318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002604	chr10	-	1102	7	FSM	ENSMUSG00000047638.16	ENST00000549996.5	1202	7	61	39	61	-39	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCGCTCCTCTGTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	89334212	89290607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_89290811_89292392_89292507_89309613_89309761_89314211_89314312_89314639_89314739_89316352_89316490_89333910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002605	chr10	+	343	3	ISM	ENSMUSG00000058589.15	ENST00000547010.5	1639	9	43	373279	43	-279507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCTCACCTCCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	89999063	90143504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_89999167_90096514_90096681_90143430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002606	chr10	+	257	2	ISM	ENSMUSG00000058589.15	ENSMUST00000099364.12	1383	12	67465	288897	67465	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCTCTTTCTGACACC	NA	NA	NA	NA	NA	NA	NA	NA	90480318	90516785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_90480419_90516628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002607	chr10	-	665	1	ISM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	92687	0	90049	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	90825837	90825172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90825200_90825800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002608	chr10	-	1116	7	FSM	ENSMUSG00000019979.13	ENST00000552268.5	1121	7	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATGGCTAAGCGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	90915904	90827315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_90827459_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002609	chr10	+	1335	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	-1	-6	-1	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTCCATAATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90918800	90938475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_90919159_90929000_90929119_90937616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002610	chr10	+	493	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	113	2626	113	-2626	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTTACCCTGAAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	90919031	90931893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_90919159_90929000_90929119_90931645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002611	chr10	+	270	1	Genic_Genomic	ENSMUSG00000019975.13	novel	NA	NA	NA	NA	15332	1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGAGTACTGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	90934250	90934520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_90934200_90934500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002612	chr10	-	1201	5	ISM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	4351	-2	3989	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATTTTTTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	90955570	90952433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002613	chr10	-	554	1	Genic_Genomic	ENSMUSG00000061904.13	novel	NA	NA	NA	NA	6571	1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTTTATTTTTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	90952988	90952434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_90952400_90953000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002614	chr10	-	624	2	NNC	ENSMUSG00000061904.13	novel	1483	7	NA	NA	6395	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAATTGTAGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	90953164	90952441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_90952976_90953074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002615	chr10	-	827	4	ISM	ENSMUSG00000061904.13	ENST00000548847.1	1164	6	4066	0	3994	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCAAACTTAATGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	90955565	90952691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90952987_90953905_90954079_90954560_90954743_90955388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002616	chr10	-	769	5	ISM	ENSMUSG00000061904.13	ENSMUST00000164505.2	1483	7	1910	406	1652	-384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTCAGGCTCCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	90957907	90953075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002617	chr10	-	842	5	ISM	ENSMUSG00000061904.13	ENST00000548847.1	1164	6	17	1224	17	48	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACATAGGTATGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	90959614	90953915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002618	chr10	-	474	3	ISM	ENSMUSG00000061904.13	ENST00000547720.1	734	5	3989	0	3989	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAGTGAATGTACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	90955570	90953963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90954079_90954560_90954743_90955393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002619	chr10	-	774	5	ISM	ENSMUSG00000061904.13	ENST00000552981.6	1355	8	-83	1954	9	-595	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCGTATTCTCCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90959912	90954558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002620	chr10	-	684	5	NNC	ENSMUSG00000061904.13	novel	1355	8	NA	NA	-2	-601	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGTAAGTGCGTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	90959831	90954564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_90954743_90955388_90955569_90957783_90957906_90959419_90959566_90959773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002621	chr10	-	679	5	NNC	ENSMUSG00000061904.13	novel	1355	8	NA	NA	9	-627	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATGTATAAAGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	90959856	90954590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_90954743_90955388_90955569_90957783_90957899_90959419_90959569_90959773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002622	chr10	-	454	3	ISM	ENSMUSG00000061904.13	ENSMUST00000170810.8	1341	8	1670	1942	1364	-632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCCCAAAATGTATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	90958195	90954595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90954743_90955388_90955569_90958068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002623	chr10	-	432	4	ISM	ENSMUSG00000061904.13	ENST00000547720.1	734	5	117	667	117	-667	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCTGGTTATGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	90959442	90954630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90954743_90955393_90955569_90957783_90957906_90959419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002624	chr10	-	552	4	FSM	ENSMUSG00000061904.13	ENST00000547534.5	546	4	1	-7	1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTATGCTTTTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	90959828	90955342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_90955569_90957783_90957906_90959419_90959569_90959773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002625	chr10	-	486	3	NNC	ENSMUSG00000061904.13	novel	546	4	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGATGTTATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	90959572	90955349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_90955557_90957779_90957906_90959419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002626	chr10	-	446	3	NNC	ENSMUSG00000061904.13	novel	546	4	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGATGTTATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	90959531	90955349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_90955569_90957783_90957899_90959419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002627	chr10	-	544	4	NNC	ENSMUSG00000061904.13	novel	546	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGATGTTATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	90959823	90955349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_90955569_90957779_90957906_90959419_90959569_90959773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002628	chr10	-	514	1	ISM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	23498	0	23079	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	NA	NA	NA	NA	NA	NA	NA	90983946	90983432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90983400_90983900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002629	chr10	-	1577	2	ISM	ENSMUSG00000019961.18	ENST00000266732.8	2957	5	8771	-1	8434	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	90998591	90996273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_90996967_90997707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002630	chr10	-	1678	1	NIC	ENSMUSG00000019961.18	novel	2957	5	NA	NA	9069	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTGTGTGGTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	90997956	90996278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_90996300_90998000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002631	chr10	-	2311	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	136	1325	58	-1325	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCATCCAGTTACAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	91007304	90997603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002632	chr10	-	685	2	FSM	ENSMUSG00000110847.2	ENST00000312179.10	676	2	-7	-2	-7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTCCTGGTGAGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	91095233	91094377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_91094779_91094949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002633	chr10	-	859	1	Genic_Genomic	ENSMUSG00000110847.2	novel	NA	NA	NA	NA	-11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	739	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTCCTGGTGAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	91095237	91094378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_91094400_91095200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002634	chr10	+	987	2	Antisense	novelGene_ENSMUSG00000110847.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCAGCGCCTTCCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	91094379	91095695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_+_91095210_91095538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002635	chr10	-	998	2	NNC	ENSMUSG00000110847.2	novel	1014	2	NA	NA	5	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGTTCCTGGTGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	91095711	91094379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_91095227_91095560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002636	chr10	-	3711	4	ISM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	26275	0	26109	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTGTTCCCTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	93120722	93083275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002637	chr10	+	407	4	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	18	18769	18	-18769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTCAGATCAGCGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	93295698	93301916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93295810_93297171_93297293_93300306_93300376_93301810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002638	chr10	+	344	4	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	1487	17667	1487	-17667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCAGGTGAGTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	93297167	93303018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93297293_93300306_93300376_93301810_93301916_93302973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002639	chr10	+	371	4	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	6128	15638	6128	-15638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGAGAAAGATTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	93301808	93305047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93301916_93302973_93303027_93304617_93304691_93304909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002640	chr10	+	429	5	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	8933	12854	8933	-12854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGTGGGCTTCTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	93304613	93307831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002641	chr10	+	308	3	NNC	ENSMUSG00000015889.9	novel	1635	17	NA	NA	8933	-13455	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGGGTTGTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93304613	93307230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_93304691_93304909_93305068_93307157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002642	chr10	+	362	3	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	12034	10244	12034	-10244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCTTTAAATTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	93307714	93310441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93307828_93308760_93308906_93310337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002643	chr10	+	382	5	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	13169	4037	13169	-4037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCCAGCTCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	93308849	93316648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002644	chr10	+	377	5	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	14665	1803	14665	-1803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAACTGAACAAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	93310345	93318882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002645	chr10	+	373	3	ISM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	20872	-11	20872	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAACCTATTAAGAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	93316552	93320696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93316649_93318823_93318929_93320524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002646	chr10	-	862	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTTCACTTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	93425569	93418890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002647	chr10	+	856	3	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	10	63149	10	-63149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAAAACCAACCGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	93477325	93518560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93477371_93480332_93480863_93518279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002648	chr10	+	721	3	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	3232	38443	3232	-38443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAACAGCATCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	93480547	93543266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93480863_93518279_93518559_93543139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002649	chr10	+	633	4	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	40962	12205	40962	-12205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCAGCTCAGTGACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	93518277	93569504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93518559_93543139_93543267_93546339_93546529_93569468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002650	chr10	+	647	4	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	65823	11559	65823	-11559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGATGCGAGGGGCCGCG	NA	NA	NA	NA	NA	NA	NA	NA	93543138	93570150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93543267_93546339_93546529_93569468_93569683_93570034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002651	chr10	+	634	4	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	92151	0	92151	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGCACTGAAGGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	93569466	93581709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_93569683_93570034_93570151_93576912_93577084_93581578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002652	chr10	+	527	1	FSM	ENSMUSG00000090610.4	ENSMUST00000170703.4	1060	1	608	-75	608	75	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACAGCTTTCTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93615129	93615656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_93615100_93615700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002653	chr10	-	2306	1	Genic_Genomic	ENSMUSG00000036112.16	novel	NA	NA	NA	NA	28918	1	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTGAAAGACCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	93696655	93694349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_93694300_93696700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002654	chr10	-	2596	4	ISM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	24309	837	24206	-837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGCTGTATTTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	93701367	93695187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002655	chr10	-	305	1	ISM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	28581	2440	28478	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	93697095	93696790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93696800_93697100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002656	chr10	-	227	3	ISM	ENSMUSG00000036112.16	ENST00000550777.5	1762	10	20748	2061	20748	-2061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGCCATATAGAATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	93704825	93698862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93698896_93701268_93701366_93704728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002657	chr10	-	170	2	ISM	ENSMUSG00000036112.16	ENST00000550777.5	1762	10	19520	7927	19520	-7927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTGCTATAAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	93706053	93704728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93704824_93705978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002658	chr10	-	249	2	ISM	ENSMUSG00000036112.16	ENST00000550777.5	1762	10	18109	9225	18109	-9225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTATGATGACATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	93707464	93706026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93706161_93707349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002659	chr10	-	230	2	ISM	ENSMUSG00000036112.16	ENST00000550777.5	1762	10	10069	10583	10069	-10583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCAAGCCTGGGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	93715504	93707384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93707512_93715401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002660	chr10	-	182	2	ISM	ENSMUSG00000036112.16	ENST00000550777.5	1762	10	9569	18591	9569	-18591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCACAGCTTCCCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	93716004	93715392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93715505_93715934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002661	chr10	-	152	2	ISM	ENSMUSG00000036112.16	ENST00000550777.5	1762	10	88	19133	88	-19133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGTCTTACGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	93725485	93715934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_93716001_93725399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002662	chr10	+	1105	4	FSM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCAAGATGTTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	94034821	94057305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002663	chr10	+	832	3	ISM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	983	114	934	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTCTGGATGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	94035799	94057191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_94035895_94039149_94039238_94056542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002664	chr10	+	933	3	NNC	ENSMUSG00000020022.18	novel	1110	4	NA	NA	944	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCAAGATGTTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	94035809	94057305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_94035895_94039149_94039235_94056542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002665	chr10	+	775	1	Genic_Genomic	ENSMUSG00000020022.18	novel	NA	NA	NA	NA	21666	1	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAAGATGTTCTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	94056531	94057306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_94056500_94057300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002666	chr10	-	621	3	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	34917	-1	34917	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTAAGTGGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94630572	94628731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_94629153_94630277_94630353_94630447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002667	chr10	-	422	1	NIC	ENSMUSG00000074785.6	novel	7302	31	NA	NA	36335	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCTAAGTGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	94629154	94628732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_94628700_94629200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002668	chr10	-	528	4	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	31480	1545	31480	-1545	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGCTTTCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	94634009	94630277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_94630353_94630447_94630589_94632231_94632380_94633845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002669	chr10	-	515	5	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	2308	6606	2308	-6606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGAGTTTGGCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	94663181	94635338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002670	chr10	-	559	4	ISM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	66	17790	66	-17790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGACAGCCTTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	94665423	94646522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_94646631_94648984_94649163_94663032_94663180_94665297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002671	chr10	-	1604	2	FSM	ENSMUSG00000045867.11	ENSMUST00000220279.2	1613	2	16	-7	16	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCCATTGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	95158811	95010600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_95011841_95158447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002672	chr10	-	1228	1	ISM	ENSMUSG00000020027.19	ENSMUST00000172070.8	2153	3	2767	0	2566	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGTTGTAGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	95248579	95247351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_95247400_95248600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002673	chr10	-	1788	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	4	430	4	-430	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGCAGCCTTACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	95252715	95247781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_95248973_95250692_95251054_95252479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002674	chr10	-	1202	3	FSM	ENSMUSG00000020027.19	ENSMUST00000170690.8	2195	3	84	909	84	217	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCTTTTAAATGAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	95251990	95248260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_95248973_95250692_95251054_95251861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002675	chr10	-	663	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	1	-3	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	95337801	95316666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002676	chr10	-	631	5	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	1404	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCAAGTGTGTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	95336385	95316669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_95316840_95326107_95326275_95329488_95329578_95332685_95332750_95336244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002677	chr10	+	332	2	ISM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	12	4202	12	-4202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTTGTCACCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	95351018	95377317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_95351100_95377066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002678	chr10	+	650	3	ISM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	26071	3113	26071	-3113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGACTCTCTGCTTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	95377077	95378406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_95377314_95377499_95377641_95378133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002679	chr10	+	281	1	Genic_Genomic	ENSMUSG00000074781.6	novel	NA	NA	NA	NA	30234	2	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTTGACTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	95381240	95381521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_95381200_95381500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002680	chr10	-	1448	1	ISM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	15692	0	4142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTATTTTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	95384316	95382868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_95382900_95384300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002681	chr10	-	1608	4	ISM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	11548	1119	-2	716	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTAATAGTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	95388460	95383987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002682	chr10	-	408	1	ISM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	14900	1832	3350	3	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTCATATTCTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95385108	95384700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_95384700_95385100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002683	chr10	-	523	5	FSM	ENSMUSG00000020029.7	ENST00000578341.2	544	5	22	-1	22	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGGGTCCCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	95399598	95385148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002684	chr10	-	759	1	FSM	ENSMUSG00000074780.3	ENSMUST00000218771.2	399	1	-66	-294	-4	294	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTCCCCCCCCCCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95509317	95508558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_95508600_95509300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002685	chr10	+	416	3	ISM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	20	55837	20	-55837	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACACGGTACAGTATACT	NA	NA	NA	NA	NA	NA	NA	NA	95776631	95825543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_95776835_95809847_95809941_95825423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002686	chr10	+	459	3	ISM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	77265	23849	77265	-23849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGAATCACTTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	95853876	95857531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_95854072_95855692_95855894_95857468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002687	chr10	+	440	3	ISM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	83144	18821	83144	-18821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGAGCTGGGGGACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	95859755	95862559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_95859915_95861893_95862034_95862418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002688	chr10	+	382	1	ISM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	104387	0	104387	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATGACTATGATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	95880998	95881380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_95881000_95881400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002689	chr10	+	1087	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	36	3878	36	263	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCTCCCAGACCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	96452903	96454793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_96453335_96454137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002690	chr10	+	724	1	Genic_Genomic	ENSMUSG00000036478.9	novel	NA	NA	NA	NA	4536	4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTATTCCTTTTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96457951	96458675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_96458000_96458700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002691	chr10	+	310	2	ISM	ENSMUSG00000019929.17	ENSMUST00000105287.11	1758	8	33	34643	33	-955	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTGCCCCTACCGATG	NA	NA	NA	NA	NA	NA	NA	NA	97315503	97319362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_97315652_97319200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002692	chr10	+	505	3	FSM	ENSMUSG00000019929.17	ENST00000441303.6	504	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACGGCCTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	97319224	97353518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_97319421_97330863_97330977_97353322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002693	chr10	+	349	2	FSM	ENSMUSG00000019929.17	ENST00000551354.1	398	2	63	-14	30	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGATCACAGGACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	97319254	97320331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_97319421_97320148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002694	chr10	+	184	1	Genic_Genomic	ENSMUSG00000019929.17	novel	NA	NA	NA	NA	923	14	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGATCACAGGACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	97320147	97320331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_97320100_97320300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002695	chr10	+	248	2	ISM	ENSMUSG00000019929.17	ENSMUST00000163448.4	1758	8	12633	11518	11637	-11030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTTCGTGTCCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	97330861	97342487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_97330977_97342354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002696	chr10	+	211	2	ISM	ENSMUSG00000019929.17	ENSMUST00000163448.4	1758	8	25333	8085	24337	-7597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAATCCATCACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97343561	97345920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_97343679_97345826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002697	chr10	+	217	2	ISM	ENSMUSG00000019929.17	ENSMUST00000163448.4	1758	8	27600	4420	26604	-3932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGTATATCCAGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	97345828	97349585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_97345921_97349460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002698	chr10	+	258	2	ISM	ENSMUSG00000019929.17	ENSMUST00000163448.4	1758	8	31288	508	30292	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTGGAAACTACAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	97349516	97353497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_97349600_97353322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002699	chr10	+	203	1	Genic_Genomic	ENSMUSG00000019929.17	novel	NA	NA	NA	NA	34584	6	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCAAAAGATATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	97353808	97354011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_97353800_97354000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002700	chr10	-	2593	2	FSM	ENSMUSG00000112647.2	ENSMUST00000217680.2	2591	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCCCATCCAGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98535572	98489658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_98492155_98535475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002701	chr10	+	814	3	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	62	39010	62	-39010	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAGTACGGTAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	98804613	98822995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_98804987_98815565_98815764_98822752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002702	chr10	+	795	4	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	28080	22906	28080	-22906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCCTGAGGACCATATG	NA	NA	NA	NA	NA	NA	NA	NA	98832631	98839099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_98832845_98835600_98835844_98837149_98837392_98839002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002703	chr10	+	799	6	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	40848	10508	40848	-10508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAATCTTCAATAACGC	NA	NA	NA	NA	NA	NA	NA	NA	98845399	98851497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002704	chr10	+	800	5	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	45811	7313	45811	-7313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGAAAGGGAGTTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	98850362	98854692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002705	chr10	+	891	2	ISM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	50607	2580	50607	-2580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTTTGTAGATACTTT	NA	NA	NA	NA	NA	NA	NA	NA	98855158	98859425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_98855294_98858669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002706	chr10	+	896	1	ISM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	110096	0	56558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	98861109	98862005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_98861100_98862000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002707	chr10	+	904	2	ISM	ENSMUSG00000019952.16	ENSMUST00000159228.8	1799	11	85802	-363	85781	363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACAGCTCACAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	99028745	99033277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_99028860_99032487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002708	chr10	+	879	1	ISM	ENSMUSG00000019952.16	ENSMUST00000159990.2	3449	11	90093	0	90093	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTCTTCTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	99033057	99033936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_99033100_99033900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002709	chr10	+	2797	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	0	-1	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGTTTTTATTTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	99099092	99103351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_99099954_99100405_99100844_99101853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002710	chr10	+	783	1	ISM	ENSMUSG00000019966.19	ENSMUST00000105283.9	5648	10	84004	0	83718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCTCTCATTTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	99935495	99936278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_99935500_99936300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002711	chr10	+	924	1	FSM	ENSMUSG00000091101.3	ENSMUST00000168769.3	927	1	6	-3	6	3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGACCCAGAGGCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	100176703	100177627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_100176700_100177600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002712	chr10	-	745	1	FSM	ENSMUSG00000096640.4	ENSMUST00000190264.2	914	1	171	-2	171	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGACCCAGAGGCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	100218251	100217506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_100217500_100218300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002713	chr10	-	750	1	ISM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	16381	0	10992	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTGAAATAAATCCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	100408876	100408126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_100408100_100408900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002714	chr10	-	424	3	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	13230	-2	8119	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACATACAGGATACATGT	NA	NA	NA	NA	NA	NA	NA	NA	100411749	100408735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_100408769_100409402_100409623_100411578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002715	chr10	-	1091	3	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	11758	163	6647	-163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCAAATCCAAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	100413221	100408900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_100409623_100411578_100411749_100413022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002716	chr10	-	407	3	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	10682	2923	5571	1367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCCTGGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	100414297	100411660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_100411749_100413022_100413221_100414176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002717	chr10	-	414	3	ISM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	5106	4284	-5	6	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAGGCATTCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100419873	100413021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_100413221_100414176_100414294_100419775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002718	chr10	-	194	1	NIC	ENSMUSG00000046567.11	novel	2564	7	NA	NA	6647	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGTAAGTGAAGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	100413221	100413027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_100413000_100413200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002719	chr10	-	330	3	NIC	ENSMUSG00000046567.11	novel	405	3	NA	NA	15	-62	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGTCAGAGCTTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	100419853	100413089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_100413221_100414176_100414294_100419771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002720	chr10	+	535	2	ISM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	-2	6008	-2	-6008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGATCTGAAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	103203789	103225067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_103204015_103224757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002721	chr10	+	627	3	ISM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	21084	52	21084	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGAAAAGTTAGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	103224875	103231023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_103225203_103229761_103229889_103230850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002722	chr10	+	632	3	NNC	ENSMUSG00000019894.15	novel	1020	4	NA	NA	21130	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTACTGTCAATTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103224921	103231077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_103225200_103229761_103229889_103230850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002723	chr10	+	290	2	ISM	ENSMUSG00000019894.15	ENST00000681281.1	996	4	25499	-1	25499	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTACTGTCAATTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103229290	103231076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_103229327_103230822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002724	chr10	+	256	1	NIC	ENSMUSG00000019894.15	novel	3543	12	NA	NA	27030	2	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTACTGTCAATTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103230821	103231077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_103230800_103231100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002725	chr10	+	2016	4	ISM	ENSMUSG00000019894.15	ENST00000266682.10	3690	12	40272	-7	40272	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAGGGAGGAGAACACT	NA	NA	NA	NA	NA	NA	NA	NA	103244063	103255383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_103244257_103245513_103245674_103252493_103252657_103253883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002726	chr10	+	829	4	FSM	ENSMUSG00000085282.9	ENST00000651263.1	830	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTGACAGACTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	105410665	105433868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_105410735_105431747_105431909_105433147_105433392_105433513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002727	chr10	+	754	3	NNC	ENSMUSG00000085282.9	novel	830	4	NA	NA	21081	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTGACAGACTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	105431745	105433868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_105431909_105433147_105433384_105433513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002728	chr10	+	1813	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTGTAATAGAAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	105676927	105683694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002729	chr10	+	422	2	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	31	454288	31	-454288	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGATTCACTCCAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	106306238	106310700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106306453_106310492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002730	chr10	+	296	2	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	4295	371827	4295	-371827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTAGACTCTTTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	106310502	106393161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106310744_106393106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002731	chr10	+	271	2	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	273139	166977	-91991	-166977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTACAGATACATGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	106579346	106598011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106579450_106597843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002732	chr10	+	276	3	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	291647	128344	-73483	-128344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGTGAGGGGTCCACGG	NA	NA	NA	NA	NA	NA	NA	NA	106597854	106636644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106598009_106603334_106603410_106636597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002733	chr10	+	416	3	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	297126	109569	-68004	-109569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAGCTCATAGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106603333	106655419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106603410_106636597_106636715_106655196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002734	chr10	+	371	2	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	348987	100092	-16143	-100092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTATCTCTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	106655194	106664896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106655419_106664749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002735	chr10	+	284	2	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	358540	98427	-6590	-98427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGCACTAAACACATCT	NA	NA	NA	NA	NA	NA	NA	NA	106664747	106666561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106664897_106666426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002736	chr10	+	349	3	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	360217	92948	-4913	-92948	internal_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTACAGTCTCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	106666424	106672040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106666562_106671556_106671641_106671912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002737	chr10	+	269	3	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	230	94269	230	-91783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATGGAAACACATATTT	NA	NA	NA	NA	NA	NA	NA	NA	106671567	106673205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106671641_106671912_106672045_106673141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002738	chr10	+	281	3	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	588	88829	588	-86343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTAAATGTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	106671925	106678645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106672045_106673141_106673205_106678546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002739	chr10	+	643	4	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	7253	73215	7253	-70729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTATGCGTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	106678590	106694259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106678639_106690797_106690934_106693269_106693491_106694021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002740	chr10	+	627	4	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	19458	71807	19458	-69321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATGTAAAAACTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	106690795	106695667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106690934_106693269_106693491_106694021_106694260_106695637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002741	chr10	+	248	3	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	22824	68240	22824	-65754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCCGGAGGTAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106694161	106699234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106694260_106695637_106695668_106699114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002742	chr10	+	716	6	ISM	ENSMUSG00000053825.16	ENST00000548586.5	4030	31	392911	25440	27775	-25434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCAAAAACGGTTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	106699112	106739554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106699246_106701107_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106739503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002743	chr10	+	254	3	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	426043	22667	60913	-22667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTACTTTATGGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	106732250	106742321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106732380_106740677_106740708_106742226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002744	chr10	+	477	3	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	70885	17868	70885	-15382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTCCTTCGTGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106742222	106749606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106742421_106743573_106743672_106749425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002745	chr10	+	1524	4	ISM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	78096	-636	78096	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGGTGTCACTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106749433	106768110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106749602_106751541_106751611_106763563_106763724_106766983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002746	chr10	+	235	2	ISM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	457356	-1	92226	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCACTGACCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106763563	106764989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106763724_106764914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002747	chr10	+	1113	1	ISM	ENSMUSG00000053825.16	ENSMUST00000217854.2	8885	32	461060	3434	95929	19	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCAGTTTCCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	106767266	106768379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_106767300_106768400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002748	chr10	-	459	1	ISM	ENSMUSG00000000435.2	ENSMUST00000000445.2	2083	3	2768	0	2768	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTTCCTATTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	107319227	107318768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_107318800_107319200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002749	chr10	-	962	3	FSM	ENSMUSG00000000435.2	ENSMUST00000000445.2	2083	3	253	868	253	-868	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGATTCCAGAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	107321742	107319636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_107320072_107320506_107320583_107321291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002750	chr10	-	1183	1	ISM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	192224	0	192224	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTGCTGTCTCTCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	108334693	108333510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_108333500_108334700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002751	chr10	-	1306	2	ISM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	186525	1926	186525	-1924	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAACACGTGCAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108340392	108335436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_108336608_108340257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002752	chr10	-	619	1	ISM	ENSMUSG00000020181.19	ENSMUST00000032719.15	9962	39	318025	317	151027	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTGTGGTGTCTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	109518055	109517436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_109517400_109518100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002753	chr10	-	155	2	ISM	ENSMUSG00000020181.19	ENSMUST00000238286.2	7316	29	140097	8948	140097	-8093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCTTGGTACCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	109528985	109527953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_109528024_109528900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002754	chr10	-	655	2	ISM	ENSMUSG00000020181.19	ENSMUST00000238286.2	7316	29	65799	81701	65799	-80846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGCAGCAGCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	109603283	109600706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_109600868_109602789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002755	chr10	-	640	3	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	147368	140630	-19756	-140630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCAGAACTTGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	109688838	109660490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_109660538_109677559_109677680_109688365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002756	chr10	-	150	2	ISM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	96503	219062	-70621	-219062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTCCGATTTATTCG	NA	NA	NA	NA	NA	NA	NA	NA	109739703	109738922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_109738976_109739606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002757	chr10	-	829	3	ISM	ENSMUSG00000020181.19	ENST00000397909.7	10242	41	37	222197	37	-219773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGCAGACATCATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	109836732	109739633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_109739725_109835837_109836206_109836362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002758	chr10	+	834	4	ISM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	-357	1073	44	-1073	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGCGCTGTCTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	110755693	110773727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002759	chr10	+	677	4	ISM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	11803	0	11788	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGCCTCCCCAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	110767853	110774800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_110767929_110771008_110771178_110773597_110773728_110774497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002760	chr10	+	810	4	ISM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	15359	-5	14943	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATCAATTCCTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	110771008	110775488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_110771178_110773597_110773728_110774497_110774592_110775071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002761	chr10	+	430	1	Genic_Genomic	ENSMUSG00000020186.8	novel	NA	NA	NA	NA	19003	15	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTATGCAGTAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	110775068	110775498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_110775100_110775500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002762	chr10	+	252	3	ISM	ENSMUSG00000058799.17	ENST00000432820.1	1124	11	1197	4950	1197	-4584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAAACCAGATGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	111322546	111326286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_111322608_111325888_111326031_111326237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002763	chr10	+	285	2	ISM	ENSMUSG00000058799.17	ENST00000432820.1	1124	11	7352	1935	7352	-1569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGTAGTGAGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	111328701	111329301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_111328843_111329157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002764	chr10	+	1948	4	ISM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	13556	365	8684	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTTCTTTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	111330033	111333646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_111330155_111330655_111330686_111331185_111331237_111331900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002765	chr10	+	250	3	ISM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	22100	0	9834	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	111331183	111332745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_111331237_111331900_111331967_111332614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002766	chr10	+	1814	1	Genic_Genomic	ENSMUSG00000058799.17	novel	NA	NA	NA	NA	10850	2	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATATTTGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111332199	111334013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_111332200_111334000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002767	chr10	+	1422	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	527	0	527	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTAAAGGTCTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111342673	111344506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_111343510_111343920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002768	chr10	+	1649	1	Genic_Genomic	ENSMUSG00000063334.17	novel	NA	NA	NA	NA	13996	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTAGTGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	111822693	111824342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_111822700_111824300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002769	chr10	+	2025	3	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	44	9725	44	-6511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCGATTGCAAATGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	112106078	112292444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_112106454_112107591_112108310_112291512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002770	chr10	+	1750	3	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	1548	2179	-7	1035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAGCTAACCAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	112107582	112299990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_112108310_112291512_112292441_112299895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002771	chr10	+	2133	3	ISM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	185501	-1	140291	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTTGAATCCTATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	112291535	112302170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_112292441_112299895_112299991_112301037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002772	chr10	+	1563	3	ISM	ENSMUSG00000035681.8	ENST00000550433.5	2972	4	184113	499	140458	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATCAACAGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	112291702	112301697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_112292441_112294394_112294560_112301037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002773	chr10	+	808	4	ISM	ENSMUSG00000035681.8	ENST00000548513.5	3067	5	184443	1019	140788	-602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTATGAGGCATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	112292032	112301177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_112292441_112294394_112294560_112299895_112299991_112301037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002774	chr10	+	1161	1	ISM	ENSMUSG00000035681.8	ENSMUST00000092175.4	5046	5	194010	13	149791	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATACCCTTCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	112301035	112302196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_112301000_112302200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002775	chr10	-	1600	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	1966	0	1966	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGACTCATCTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	112762934	112761334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_112761300_112762900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002776	chr10	-	337	1	Genic_Genomic	ENSMUSG00000020130.10	novel	NA	NA	NA	NA	53261	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATTTCTTTGGAGCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	115034111	115033774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_115033800_115034100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002777	chr10	-	1196	1	ISM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	51847	553	51847	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGCTTCTTCATCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	115035525	115034329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_115034300_115035500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002778	chr10	-	324	3	ISM	ENSMUSG00000020130.10	ENST00000550746.5	3259	18	38663	11132	38654	-11132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGAGTGACGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	115048718	115045461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_115045562_115046100_115046202_115048595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002779	chr10	-	319	2	ISM	ENSMUSG00000020130.10	ENST00000550746.5	3259	18	31068	20735	31059	-20735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGGGTGGGGCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	115056313	115055064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_115055186_115056115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002780	chr10	-	344	2	ISM	ENSMUSG00000020130.10	ENST00000550746.5	3259	18	18216	30708	18207	-30708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAGTAAGTACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	115069165	115065037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_115065241_115069024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002781	chr10	-	949	1	Genic_Genomic	ENSMUSG00000069520.7	novel	NA	NA	NA	NA	20537	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	115177592	115176643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_115176600_115177600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002782	chr10	-	2142	2	ISM	ENSMUSG00000069520.7	ENSMUST00000219890.2	2949	7	18316	-3	18316	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTTTTGTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	115179813	115176643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_115178575_115179602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002783	chr10	-	3853	1	Genic_Genomic	ENSMUSG00000020137.6	novel	NA	NA	NA	NA	12046	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTTGTCATCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	115208159	115204306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_115204300_115208200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002784	chr10	-	3867	2	ISM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	7954	806	7819	262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGAAACTTTAGACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	115212386	115205114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_115208852_115212256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002785	chr10	-	138	1	Genic_Genomic	ENSMUSG00000020137.6	novel	NA	NA	NA	NA	410	2	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAACTGAGTCAATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	115219795	115219657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_115219700_115219800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002786	chr10	-	228	2	FSM	ENSMUSG00000020137.6	ENST00000547843.1	228	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTAACTGAGTCAATCT	NA	NA	NA	NA	NA	NA	NA	NA	115220205	115219659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_115219792_115220109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002787	chr10	-	866	2	FSM	ENSMUSG00000112099.2	ENST00000435535.1	785	2	-1	-80	0	73	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAATGGATCAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115436233	115434857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_115435661_115436170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002788	chr10	-	783	2	NNC	ENSMUSG00000112099.2	novel	785	2	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAAATCCAGATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	115436232	115434936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_115435661_115436173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002789	chr10	-	731	1	NIC	ENSMUSG00000112099.2	novel	788	2	NA	NA	565	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAAATCCAGATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	115435667	115434936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_115434900_115435700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002790	chr10	-	489	1	ISM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	95859	3	63511	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTTGGCTTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	116321557	116321068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_116321100_116321600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002791	chr10	-	627	3	ISM	ENSMUSG00000020166.16	ENSMUST00000164088.8	2618	14	55368	743	55368	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTTAGTTTCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	116329700	116321812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_116322192_116328196_116328342_116329597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002792	chr10	-	376	3	ISM	ENSMUSG00000020166.16	ENSMUST00000164088.8	2618	14	47844	13171	47844	11455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTCCATAAATATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	116337224	116334240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_116334364_116335246_116335372_116337096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002793	chr10	-	411	3	ISM	ENSMUSG00000020166.16	ENSMUST00000164088.8	2618	14	41975	18870	41975	5756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTTACTCTGGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	116343093	116339939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_116340020_116342133_116342317_116342945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002794	chr10	+	287	1	FSM	ENSMUSG00000111937.2	ENSMUST00000218130.2	478	1	353	-162	353	162	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCAAGGAAGAGCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	116468083	116468370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_116468100_116468400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002795	chr10	-	401	2	ISM	ENSMUSG00000034057.9	ENST00000547771.6	3115	25	119837	0	119837	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCTGAAAACACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	116612927	116612392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_116612720_116612853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002796	chr10	+	675	3	FSM	ENSMUSG00000112627.2	ENSMUST00000220251.2	676	3	3	-2	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTCTCTCTCATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	116786474	116795211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_116786598_116791432_116791563_116794789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002797	chr10	+	396	1	Genic_Genomic	ENSMUSG00000112627.2	novel	NA	NA	NA	NA	12297	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCCTTGCTGTCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	116798789	116799185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_116798800_116799200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002798	chr10	-	441	1	FSM	ENSMUSG00000111966.2	ENSMUST00000219792.2	443	1	73	-71	73	71	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATGTCAGAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	116809040	116808599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_116808600_116809000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002799	chr10	+	1181	3	FSM	ENSMUSG00000020169.5	ENST00000266661.8	1177	3	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTGCTTTAGATGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	116822469	116837795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_116822718_116828968_116829203_116837096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002800	chr10	+	1183	3	NNC	ENSMUSG00000020169.5	novel	1177	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGCTTTAGATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	116822470	116837794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_116822722_116828968_116829203_116837096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002801	chr10	+	562	3	ISM	ENSMUSG00000020169.5	ENST00000488961.5	1887	6	11178	894	11178	-778	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACGCTGCAGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116843489	116860167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_116843574_116844794_116844947_116859841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002802	chr10	+	443	1	Genic_Genomic	ENSMUSG00000020169.5	novel	NA	NA	NA	NA	28310	3	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTTGTTCCTTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	116860621	116861064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_116860600_116861100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002803	chr10	-	894	4	ISM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	4078	-1	3949	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTGCCTCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	117056334	117051125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002804	chr10	-	96	1	ISM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	8741	449	8612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCAACTGGCGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	117051671	117051575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117051600_117051700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002805	chr10	-	142	2	ISM	ENSMUSG00000020171.9	ENST00000548020.5	587	5	2112	1802	2112	-1802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGGGAAGAAAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	117058171	117053377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117053427_117058078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002806	chr10	-	102	2	ISM	ENSMUSG00000020171.9	ENST00000548020.5	587	5	81	6560	81	-6560	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGACGGGCACACTCA	NA	NA	NA	NA	NA	NA	NA	NA	117060202	117058135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117058199_117060163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002807	chr10	-	2010	1	ISM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	30288	0	30246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATACTTTGCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	117182587	117180577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117180600_117182600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002808	chr10	-	2084	2	ISM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	20803	-1466	20802	1463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGATAGAATTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	117192031	117183480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117185373_117191839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002809	chr10	+	880	3	ISM	ENSMUSG00000020183.12	ENSMUST00000020399.6	5195	9	46462	3475	46240	-3475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTACGACCTTTCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	117511866	117519782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_117511998_117515867_117516017_117519182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002810	chr10	+	790	3	ISM	ENSMUSG00000020183.12	ENST00000546373.5	1797	9	50306	0	50306	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATACAGTGAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117515932	117529747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_117516017_117519182_117519783_117529641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002811	chr10	+	4057	1	ISM	ENSMUSG00000020183.12	ENSMUST00000020399.6	5195	9	53796	0	53574	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCTCTTTCCACTACT	NA	NA	NA	NA	NA	NA	NA	NA	117519200	117523257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_117519200_117523300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002812	chr10	-	493	1	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	21391	0	20413	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTCAGTGATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	117525272	117524779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117524800_117525300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002813	chr10	-	800	3	NNC	ENSMUSG00000020184.16	novel	800	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATTATTTTTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	117545691	117526051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_117526691_117541059_117541130_117545600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002814	chr10	-	805	3	NNC	ENSMUSG00000020184.16	novel	800	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATTATTTTTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	117545691	117526051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_117526691_117541059_117541135_117545600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002815	chr10	-	644	1	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	18990	1	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATTATTTTTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	117526695	117526051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_117526100_117526700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002816	chr10	-	655	2	FSM	ENSMUSG00000020184.16	ENST00000393413.7	651	2	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTGACCTGCTCACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	117545686	117526117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_117526691_117545604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002817	chr10	+	647	2	Antisense	novelGene_ENSMUSG00000020184.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGCCTACAAGTAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	117526118	117545685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_+_117526688_117545607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002818	chr10	-	656	2	NNC	ENSMUSG00000020184.16	novel	651	2	NA	NA	1	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTGACCTGCTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	117545684	117526118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_117526691_117545600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002819	chr10	-	925	5	NNC	ENSMUSG00000020184.16	novel	960	5	NA	NA	36	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTGACCTGCTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	117545649	117526118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_117526691_117527049_117527128_117528486_117528643_117541059_117541130_117545600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002820	chr10	-	304	3	NNC	ENSMUSG00000020184.16	novel	384	3	NA	NA	-1	-80	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTGCAAAGAAGCTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	117545686	117526200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_117526349_117541059_117541130_117545600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002821	chr10	-	161	2	NNC	ENSMUSG00000020184.16	novel	800	3	NA	NA	4565	-122	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCACGGCAAGACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	117541120	117526242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_117526343_117541059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002822	chr10	-	179	2	NNC	ENSMUSG00000020184.16	novel	800	3	NA	NA	4551	-126	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTGTTCACGGCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	117541134	117526246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_117526351_117541059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002823	chr10	-	486	4	ISM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	15692	1821	14714	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACGATAAGGGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	117530971	117526600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002824	chr10	+	159	2	Antisense	novelGene_ENSMUSG00000020184.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGCCTACAAGTAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	117541055	117545685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_+_117541137_117545607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002825	chr10	-	450	1	Genic_Genomic	ENSMUSG00000052681.9	novel	NA	NA	NA	NA	31616	5	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTCGTACTCGTTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	117650220	117649770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_117649800_117650200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002826	chr10	-	662	1	ISM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	30831	672	30727	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTGCCACTGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	117651109	117650447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117650400_117651100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002827	chr10	-	1106	5	FSM	ENSMUSG00000052681.9	ENST00000543393.5	846	5	0	-260	0	136	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATCTGTTGGGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	117681836	117651082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117681735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002828	chr10	-	506	2	ISM	ENSMUSG00000052681.9	ENST00000539091.5	959	6	28456	-10	28456	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTCCTATATAGACTACT	NA	NA	NA	NA	NA	NA	NA	NA	117653380	117651311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_117651686_117653248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002829	chr10	+	1000	3	ISM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	22375	248	22262	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGATTTGTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	118000111	118004654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_118000353_118002529_118002590_118003955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002830	chr10	+	951	1	Genic_Genomic	ENSMUSG00000020212.15	novel	NA	NA	NA	NA	26104	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATGCTTCTGTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	118003953	118004904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_118004000_118004900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002831	chr10	-	1890	1	Genic_Genomic	ENSMUSG00000020114.13	novel	NA	NA	NA	NA	38916	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTTTTCCTTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	119037044	119035154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_119035200_119037000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002832	chr10	-	1893	6	ISM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	28668	3330	28668	-3330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTTTCTTTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119047292	119038489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002833	chr10	+	702	6	ISM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	6800	0	6770	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTCTTCTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	120051454	120060822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002834	chr10	+	267	2	ISM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	2	4394	2	-3883	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGAGGAAAAGGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	120062976	120064093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_120063029_120063878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002835	chr10	+	719	3	FSM	ENSMUSG00000020224.16	ENSMUST00000130198.3	1463	3	195	549	195	-549	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCGTGTCTTGAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	120063285	120067427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_120063455_120063878_120064109_120067107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002836	chr10	+	346	1	Genic_Genomic	ENSMUSG00000020224.16	novel	NA	NA	NA	NA	5053	2	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTCAGAATCGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120068143	120068489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_120068100_120068500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002837	chr10	-	523	1	ISM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	114672	0	114672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGTGTGTGTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	120197702	120197179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_120197200_120197700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002838	chr10	+	459	2	FSM	ENSMUSG00000086522.2	ENSMUST00000145987.2	657	2	143	55	143	-55	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACACAAGATTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	120735204	120737738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_120735322_120737396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002839	chr10	-	393	1	ISM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	39928	12	31863	3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGTAAAAGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	121382764	121382371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_121382400_121382800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002840	chr10	-	453	3	ISM	ENSMUSG00000020115.4	ENST00000650762.1	2231	18	7930	17017	7930	-17017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGCTCTGCGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	121406697	121399830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_121400011_121403933_121404045_121406535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002841	chr10	-	383	3	ISM	ENSMUSG00000020115.4	ENST00000650762.1	2231	18	6697	21192	6697	-21192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGTACAGAAAGCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	121407930	121404005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_121404045_121406535_121406697_121407747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002842	chr10	-	741	1	ISM	ENSMUSG00000034667.9	ENSMUST00000039810.8	5992	25	38196	0	38196	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121424025	121423284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_121423300_121424000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002843	chr10	+	1167	3	FSM	ENSMUSG00000053684.9	ENST00000544871.1	1236	3	6	63	6	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTGCCCTTAAGAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	121575833	121586965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_121575957_121581235_121581522_121586207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002844	chr10	+	803	1	ISM	ENSMUSG00000053684.9	ENST00000544871.1	1236	3	10398	0	10383	0	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTGCCCAAGTTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	121586225	121587028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_121586200_121587000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002845	chr10	-	1002	1	Genic_Genomic	ENSMUSG00000034620.18	novel	NA	NA	NA	NA	18258	2	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTTGTGTATCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	121915018	121914016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_121914000_121915000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002846	chr10	-	1426	3	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	6592	2641	6592	-2641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGACACAGGTACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	121926684	121916659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_121917595_121924783_121924955_121926364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002847	chr10	-	1003	4	ISM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	19	12370	19	-12370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGCCTTTAGGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	121933257	121926388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_121926680_121930494_121930598_121931843_121932000_121932804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002848	chr10	+	428	2	FSM	ENSMUSG00000020123.7	ENSMUST00000020323.7	2670	2	1030	1212	1030	-1212	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGAGCCGGAGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	122285433	122288145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_122285695_122287978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002849	chr10	+	384	1	ISM	ENSMUSG00000020123.7	ENSMUST00000020323.7	2670	2	4570	0	4570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCATGGTCCAGCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	122288973	122289357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_122289000_122289400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002850	chr10	-	345	1	FSM	ENSMUSG00000112879.2	ENSMUST00000219693.2	361	1	16	0	16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTCTGGTTCATCATG	NA	NA	NA	NA	NA	NA	NA	NA	123014573	123014228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_123014200_123014600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002851	chr10	-	978	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	66	-1	66	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATTTTTTGGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	126737151	126723116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002852	chr10	+	411	1	Genic_Genomic	ENSMUSG00000078429.10	novel	NA	NA	NA	NA	3953	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGAGCTGCTTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	126835434	126835845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_126835400_126835800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002853	chr10	-	1195	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	12	-1	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTGTGAGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126866697	126858199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002854	chr10	-	418	2	FSM	ENSMUSG00000080115.4	ENST00000548256.5	410	2	-1	-7	-1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCGCTACTGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	126876971	126869000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_126869300_126876852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002855	chr10	+	392	2	Antisense	novelGene_ENSMUSG00000080115.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGCTCAGAGCCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	126869007	126876954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_+_126869293_126876847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002856	chr10	-	292	1	NIC	ENSMUSG00000080115.4	novel	2719	3	NA	NA	7671	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTACCTTCCCGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	126869299	126869007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_126869000_126869300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002857	chr10	-	404	2	NIC	ENSMUSG00000080115.4	novel	410	2	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTACCTTCCCGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	126876968	126869007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_126869300_126876856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002858	chr10	+	430	4	ISM	ENSMUSG00000006732.15	ENST00000257848.7	615	5	40	296	40	-296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAGACATCCGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	126877891	126880998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_126877940_126878928_126879093_126880624_126880739_126880894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002859	chr10	+	527	4	ISM	ENSMUSG00000006732.15	ENST00000257848.7	615	5	1077	0	1077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAGACCCCCTAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	126878928	126881294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_126879093_126880624_126880739_126880894_126880997_126881147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002860	chr10	+	1490	4	ISM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	2533	0	2482	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGAGTGTTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126880333	126882234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_126880521_126880624_126880739_126880894_126880997_126881147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002861	chr10	+	768	4	ISM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	0	2914	0	-1231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGGCGTTAGCCGACT	NA	NA	NA	NA	NA	NA	NA	NA	126899402	126900875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002862	chr10	+	591	3	NNC	ENSMUSG00000006728.13	novel	714	7	NA	NA	1	-1516	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTAGGGGTGGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	126899403	126900590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_126899629_126900088_126900318_126900453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002863	chr10	+	366	3	FSM	ENSMUSG00000006728.13	ENST00000549606.5	366	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGACCTGGGCGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126899450	126902106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_126899629_126901821_126901873_126901969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002864	chr10	+	701	5	ISM	ENSMUSG00000006728.13	ENST00000257904.11	1391	8	593	1342	593	-234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATTTGATAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	126900086	126901872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002865	chr10	+	648	4	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	593	-972	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGGACTAGAAACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	126900086	126901134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_126900323_126900453_126900590_126900703_126900869_126901023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002866	chr10	+	1186	6	ISM	ENSMUSG00000006728.13	ENST00000257904.11	1391	8	959	-167	959	167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTAGGTGGGGCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	126900452	126903381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002867	chr10	+	602	5	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	1272	128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGCCTTAAATAACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	126900765	126902999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_126900869_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002868	chr10	-	1551	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	6	-1	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTTTTCCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	126906127	126903147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002869	chr10	+	627	1	Genic_Genomic	ENSMUSG00000006728.13	novel	NA	NA	NA	NA	3670	1	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACAGAGAAACCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	126903163	126903790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_126903200_126903800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002870	chr10	+	1272	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217956.2	1770	2	498	0	498	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTGTCTTCAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	126906741	126910665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_126907477_126910128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002871	chr10	+	1230	2	ISM	ENSMUSG00000025422.11	ENSMUST00000039259.7	5633	19	12301	611	12301	-611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGGGGCCTTGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	126927076	126928427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_126927318_126927438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002872	chr10	+	991	1	Genic_Genomic	ENSMUSG00000025422.11	novel	NA	NA	NA	NA	13439	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGGAGCAACAGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	126928214	126929205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_126928200_126929200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002873	chr10	+	494	3	ISM	ENSMUSG00000006731.11	ENST00000449184.7	1425	6	316	3388	186	-1199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGTGAGAGAGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	127001279	127002752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127001389_127001872_127002092_127002586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002874	chr10	+	438	3	ISM	ENSMUSG00000006731.11	ENST00000552350.5	910	4	57	976	57	-976	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAGGAAGGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	127001926	127002975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127002092_127002586_127002752_127002867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002875	chr10	+	777	5	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	58	1978	58	-102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCTGCCCGCAAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	127001927	127006038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127002092_127002867_127002975_127003535_127003751_127005612_127005712_127005846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002876	chr10	+	447	3	ISM	ENSMUSG00000006731.11	ENST00000552350.5	910	4	766	192	766	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGGAGGGGTAGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	127002635	127003759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127002752_127002867_127002975_127003535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002877	chr10	+	227	2	NNC	ENSMUSG00000006731.11	novel	910	4	NA	NA	1051	-236	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCGGAGCTACCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	127002920	127003715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_127002968_127003535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002878	chr10	+	890	5	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	1663	988	1663	888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCGGCGCCCCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	127003532	127007028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002879	chr10	+	245	1	NIC	ENSMUSG00000006731.11	novel	1425	6	NA	NA	1841	4	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATTCCCACTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	127003710	127003955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_127003700_127004000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002880	chr10	+	1093	4	ISM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	3991	-2	3991	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAGTGGAAACACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	127005860	127008018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127006038_127006459_127006601_127006787_127007029_127007484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002881	chr10	+	716	1	NIC	ENSMUSG00000006731.11	novel	2395	11	NA	NA	5614	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTTGTGTCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127007483	127008199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_127007500_127008200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002882	chr10	-	288	1	Genic_Genomic	ENSMUSG00000019467.16	novel	NA	NA	NA	NA	5960	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTTGTTGTCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	127018681	127018393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_127018400_127018700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002883	chr10	-	289	1	ISM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	5043	0	3800	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	127026535	127026246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127026200_127026500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002884	chr10	-	449	2	ISM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	4162	425	2919	22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTGGCCAAGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	127027416	127026671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127026909_127027204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002885	chr10	-	405	2	ISM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	2934	692	1673	-509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACTCCTCCTCATCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	127028662	127027202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127027423_127028477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002886	chr10	-	413	3	ISM	ENSMUSG00000040415.16	ENSMUST00000130855.8	1925	6	1234	2688	-9	-2241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGGGAGCTCATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	127030344	127028934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127029208_127029598_127029673_127030278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002887	chr10	-	2080	1	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	12401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127035015	127032935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_127032900_127035000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002888	chr10	-	2212	3	ISM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	11697	240	11689	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGTGCCCGGTTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	127035727	127033175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127035014_127035181_127035286_127035457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002889	chr10	-	527	4	ISM	ENSMUSG00000025417.9	ENST00000550465.5	1517	10	10667	518	10667	-518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGTTCCCCACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	127036749	127035181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127035286_127035457_127035726_127036052_127036167_127036708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002890	chr10	-	570	4	ISM	ENSMUSG00000025417.9	ENST00000550465.5	1517	10	10361	793	10361	-793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGAGAACCTGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	127037055	127035456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127035726_127036052_127036167_127036708_127036748_127036907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002891	chr10	-	553	4	ISM	ENSMUSG00000025417.9	ENST00000422156.7	1542	9	56	2302	-4	-2255	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACCTCAAGGTAAGAACG	NA	NA	NA	NA	NA	NA	NA	NA	127047428	127036918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127037055_127042482_127042580_127044738_127044837_127047206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002892	chr10	+	893	4	NNC	ENSMUSG00000025408.16	novel	890	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	127126643	127132157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_127126765_127129580_127129629_127131189_127131348_127131591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002893	chr10	-	222	1	NIC	ENSMUSG00000040354.15	novel	2939	21	NA	NA	15187	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCCTGGTCTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	127132311	127132089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_127132100_127132300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002894	chr10	-	304	2	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	14994	-7	14994	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAAGCCGAGCCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	127132504	127132100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127132310_127132409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002895	chr10	-	329	3	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	14001	301	14001	-301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGGGCGGGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	127133497	127132408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127132503_127132741_127132814_127133334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002896	chr10	-	295	2	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	13789	1225	13789	-1225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTCATTAATGTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	127133709	127133332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127133522_127133603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002897	chr10	-	433	3	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	12187	1495	12187	-1495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCAGGAGCTAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	127135311	127133602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127133709_127133790_127133923_127135116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002898	chr10	-	332	2	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	11563	3009	11563	-3009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGGAACTGGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127135935	127135116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127135331_127135817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002899	chr10	-	340	3	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	11047	3757	11047	-3757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCTGAGGACAACTACA	NA	NA	NA	NA	NA	NA	NA	NA	127136451	127135864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127135936_127136046_127136143_127136278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002900	chr10	-	252	2	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	8740	4168	8740	-4168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTTTAGCCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	127138758	127136275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127136450_127138680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002901	chr10	-	275	2	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	7245	6573	7245	-6573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGCAGCCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	127140253	127138680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127138756_127140053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002902	chr10	-	409	2	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	6001	7946	6001	-7946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGAGGAAGAACTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	127141497	127140053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127140256_127141290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002903	chr10	-	423	3	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	3263	9190	3263	-9190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAAGTAGGTTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	127144235	127141297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127141495_127141609_127141727_127144126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002904	chr10	-	283	2	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	2955	12017	2955	-12017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGACACCGAGAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	127144543	127144124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127144234_127144369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002905	chr10	-	257	2	ISM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	2802	12278	2645	-12261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAACTGGGCAGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	127144853	127144368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127144549_127144776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002906	chr10	-	213	2	ISM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	1646	12686	1489	-12669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATTGTACATATCAT	NA	NA	NA	NA	NA	NA	NA	NA	127146009	127144776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127144853_127145872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002907	chr10	-	216	2	ISM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	1487	13781	1330	-13764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGACTTGAAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	127146168	127145871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127146008_127146088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002908	chr10	-	261	2	ISM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	-61	14205	-61	-14205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTATTGGTTCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	127147559	127146312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127146404_127147389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002909	chr10	+	559	4	ISM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	4941	-1	4941	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGATTAGGCCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	127343592	127344556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127343654_127343814_127343867_127343949_127344088_127344248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002910	chr10	-	299	1	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	4957	8	4957	8	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCCACGGCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127353298	127352999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127353000_127353300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002911	chr10	-	535	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	4005	524	4005	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGGCATAAACTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	127354250	127353515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127353786_127353893_127354002_127354093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002912	chr10	-	326	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	3814	942	3814	-926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAGTCAACATTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	127354441	127353933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127354002_127354093_127354250_127354339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002913	chr10	-	428	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	3424	1101	3424	-1085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAATCTGGGGTCTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	127354831	127354092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127354250_127354339_127354440_127354660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002914	chr10	-	367	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	3124	1389	3124	-1373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGATGCCCTGCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	127355131	127354380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127354440_127354660_127354827_127354989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002915	chr10	-	364	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	2875	1734	2875	-1718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCCCTACAGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	127355380	127354725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127354827_127354989_127355130_127355257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002916	chr10	-	294	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	2685	2039	2685	-2023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTACCACCACCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	127355570	127355030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127355130_127355257_127355381_127355498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002917	chr10	-	410	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	2213	2264	2213	-2248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGAGGGACTGCCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	127356042	127355255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127355381_127355498_127355581_127355839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002918	chr10	-	342	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	1967	2530	1967	-2514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGCCCTATAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	127356288	127355521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127355581_127355839_127356041_127356206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002919	chr10	-	433	3	ISM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	1270	2895	1270	-2879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTCATGATCGAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	127356985	127355886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127356041_127356206_127356287_127356786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002920	chr10	-	356	2	ISM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	0	3778	0	-3778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACGTGAGGATATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127358313	127356785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127356985_127358156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002921	chr10	-	1013	1	Genic_Genomic	ENSMUSG00000040258.7	novel	NA	NA	NA	NA	8076	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGCCTGTGTTAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	127362352	127361339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_127361300_127362400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002922	chr10	-	709	1	ISM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	5084	0	5006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	127497495	127496786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127496800_127497500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002923	chr10	-	2312	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	0	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	127502501	127496786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002924	chr10	+	867	4	FSM	ENSMUSG00000099009.2	ENST00000398138.5	914	4	47	0	47	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTATTGGACTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127595851	127626860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_127596120_127598833_127599093_127626057_127626222_127626684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002925	chr10	+	175	1	FSM	ENSMUSG00000112909.2	ENSMUST00000219845.2	357	1	183	-1	183	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCCCTGCCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	127847827	127848002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_127847800_127848000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002926	chr10	+	737	7	ISM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	9	264	9	-264	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGCCCATCAATTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	127871452	127884238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002927	chr10	+	466	5	ISM	ENSMUSG00000061315.15	ENST00000679092.1	864	8	880	565	854	-540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACCGTCCAAGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	127872357	127883962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127872430_127882048_127882123_127882597_127882676_127883526_127883674_127883867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002928	chr10	+	741	6	ISM	ENSMUSG00000061315.15	ENSMUST00000092048.13	6745	9	10531	-31	10531	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGTATGTGGGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	127882034	127884537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002929	chr10	+	615	4	ISM	ENSMUSG00000071072.13	ENST00000448157.6	1027	7	-59	6190	1	-6190	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTTGGGTTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	127894823	127906101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002930	chr10	+	246	2	ISM	ENSMUSG00000071072.13	ENST00000614328.4	2077	8	251	8514	16	-7683	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGATGTTAATGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	127895014	127904608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127895156_127904503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002931	chr10	+	981	6	ISM	ENSMUSG00000071072.13	ENST00000436399.6	953	7	9530	-173	9530	173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGGATGCCCTAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	127904528	127912542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127904655_127905084_127905155_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002932	chr10	+	598	5	ISM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	11180	885	11004	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCGGACAAATAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	127906002	127912256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002933	chr10	+	309	1	ISM	ENSMUSG00000071072.13	ENST00000614328.4	2077	8	17219	831	16984	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATCATAACACAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	127911982	127912291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127912000_127912300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002934	chr10	+	649	1	Genic_Genomic	ENSMUSG00000071072.13	novel	NA	NA	NA	NA	17495	1	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGTGTCACCTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	127912493	127913142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_127912500_127913100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002935	chr10	+	639	3	ISM	ENSMUSG00000040054.18	ENSMUST00000217851.2	8385	29	31	18183	6	-18179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTCCTGATCAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	127927509	127946988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127927646_127944762_127944901_127946623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002936	chr10	+	548	3	ISM	ENSMUSG00000040054.18	ENST00000379441.7	8303	30	19159	16674	13892	-16674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTACACCAAGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	127946622	127948493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127947013_127947102_127947218_127948450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002937	chr10	+	864	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	14021	15624	14021	-15624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAAGGTAAGTGACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	127946751	127949543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127947218_127948450_127948637_127949331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002938	chr10	+	852	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	15725	14513	15725	-14513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTCCACACTCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	127948455	127950654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127948637_127949331_127949551_127950202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002939	chr10	+	621	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	17470	13130	17470	-13130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATAGCAAGCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127950200	127952037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127950653_127950893_127950955_127951929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002940	chr10	+	527	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	22587	7968	22587	-7968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGGTGGGAATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	127955317	127957199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127955370_127955492_127955748_127956979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002941	chr10	+	506	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	22982	7318	22982	-7318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGACCAAAGTCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	127955712	127957849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127955748_127956979_127957195_127957459_127957535_127957668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002942	chr10	+	484	4	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	24300	7167	24300	-7167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTTTAATCTCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	127957030	127958000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127957195_127957459_127957535_127957668_127957850_127957936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002943	chr10	+	621	2	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	25442	5801	25442	-5801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGAGCCTGATGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	127958172	127959366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127958320_127958892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002944	chr10	+	761	2	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	26257	5309	26257	-5309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAAACTTGGCTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	127958987	127959858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127959525_127959634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002945	chr10	+	556	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	27284	4119	27284	-4119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGTGACTCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	127960014	127961048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127960132_127960203_127960356_127960761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002946	chr10	+	553	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	27472	3920	27472	-3920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGAAGTCTGTCAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	127960202	127961247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127960356_127960761_127961052_127961137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002947	chr10	+	503	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	28407	3058	28407	-3058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTTAGTGGACTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	127961137	127962109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127961271_127961367_127961515_127961886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002948	chr10	+	718	3	ISM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	29272	2245	29272	-2245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCCTCCTTCCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	127962002	127962922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127962111_127962194_127962339_127962456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002949	chr10	+	544	1	ISM	ENSMUSG00000040054.18	ENSMUST00000238829.2	8411	29	37176	2	31896	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAAGATTGCATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127964626	127965170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_127964600_127965200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002950	chr10	-	403	1	Genic_Genomic	ENSMUSG00000040043.18	novel	NA	NA	NA	NA	44476	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCATAAGTACACCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	127967828	127967425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_127967400_127967800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002951	chr10	-	178	1	ISM	ENSMUSG00000040043.18	ENSMUST00000238843.2	3380	15	46943	1619	43081	5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCAGTTGAGGTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	127969223	127969045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127969000_127969200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002952	chr10	-	170	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	42708	235	42708	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTGTAGCCTGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	127969596	127969285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127969369_127969509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002953	chr10	-	151	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	42244	457	42244	-457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTATGGTGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	127970060	127969507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127969595_127969996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002954	chr10	-	193	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	41328	945	41328	-945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCTTTTTCGGTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	127970976	127969995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127970078_127970865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002955	chr10	-	206	2	ISM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	38911	1890	38867	-1815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGGATTGTCTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	127973437	127970865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127970977_127973342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002956	chr10	-	160	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	40723	1825	40723	-1825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGCACGGTAAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	127971581	127970875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127970977_127971522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002957	chr10	-	158	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	38874	2480	38874	-2480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCAGTGAGTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	127973430	127971530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127971601_127973342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002958	chr10	-	231	3	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	38403	4315	38403	-4315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCTGTGTCTTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	127973901	127973365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127973437_127973529_127973577_127973788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002959	chr10	-	213	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	38210	4743	38210	-4743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGTAAAAAGATCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	127974094	127973793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127973899_127973986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002960	chr10	-	224	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	30696	4940	30696	-4940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGAGGCCTCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	127981608	127973990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127974095_127981488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002961	chr10	-	168	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	29773	12476	29773	-12476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCCCCAGCCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	127982531	127981526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127981634_127982470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002962	chr10	-	135	2	ISM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	11	13419	11	-13419	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGAGAGACCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	128012293	127982469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_127982530_128012218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002963	chr10	+	518	3	ISM	ENSMUSG00000044005.14	ENST00000610413.4	2049	15	11	8564	11	-8564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCATCTCCAGGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	128030503	128037239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128030777_128036754_128036835_128037074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002964	chr10	+	341	4	ISM	ENSMUSG00000044005.14	ENST00000539272.5	2107	16	1758	6077	1758	-6077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCCTCACACTCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	128036751	128039726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128036835_128037074_128037239_128037427_128037487_128039691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002965	chr10	+	357	4	ISM	ENSMUSG00000044005.14	ENST00000610413.4	2049	15	9451	4667	4950	-4667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTATCTGCTGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	128039943	128041136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128040003_128040529_128040597_128040729_128040781_128040956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002966	chr10	+	362	3	ISM	ENSMUSG00000044005.14	ENST00000539272.5	2107	16	5734	2931	5734	-2931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGTTCTGCATATAG	NA	NA	NA	NA	NA	NA	NA	NA	128040727	128042872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128040781_128040956_128041134_128042740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002967	chr10	+	475	4	ISM	ENSMUSG00000044005.14	ENST00000539272.5	2107	16	5954	2310	5954	-2310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTGTCATGACTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	128040947	128043493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128041134_128042740_128042873_128043166_128043260_128043429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002968	chr10	+	275	2	NNC	ENSMUSG00000044005.14	novel	2049	15	NA	NA	5982	-2937	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGTGAGTTGTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	128040975	128042866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_128041138_128042753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002969	chr10	+	310	4	ISM	ENSMUSG00000044005.14	ENST00000539272.5	2107	16	7784	1284	7784	-1284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGCTGCAGCTGAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	128042777	128044519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128042873_128043166_128043260_128043429_128043492_128044459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002970	chr10	+	490	4	ISM	ENSMUSG00000044005.14	ENST00000539272.5	2107	16	8435	361	8435	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTTTTCTGAGAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	128043428	128045442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128043492_128044459_128044537_128044974_128045039_128045156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002971	chr10	+	303	1	ISM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	15180	0	10512	0	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	128045505	128045808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128045500_128045800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002972	chr10	+	697	3	ISM	ENSMUSG00000005682.10	ENST00000257931.9	4407	26	3	13096	3	-13096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCCTTTCAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	128139213	128144104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128139341_128139963_128140363_128143933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002973	chr10	+	722	4	ISM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	6	12692	6	-12692	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAATCGTTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	128139967	128144508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128140363_128143933_128144104_128144204_128144326_128144472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002974	chr10	+	706	3	ISM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	4942	10535	4942	-10535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGTGTTCAGAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	128144903	128146665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128145174_128146039_128146383_128146572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002975	chr10	+	798	2	ISM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	16153	0	16153	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTTATCTCATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	128156114	128157200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128156315_128156602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002976	chr10	+	598	1	ISM	ENSMUSG00000005682.10	ENSMUST00000005825.8	4445	26	17399	22	16641	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTTATCTCATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	128156602	128157200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128156600_128157200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002977	chr10	+	1385	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAGTGTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	128158327	128163424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002978	chr10	+	1155	6	ISM	ENSMUSG00000005683.9	ENST00000542324.6	1861	11	15333	0	15333	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTAGATCTGCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	128188992	128197261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002979	chr10	-	490	1	Genic_Genomic	ENSMUSG00000039914.7	novel	NA	NA	NA	NA	5106	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTTTGAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	128199454	128198964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128199000_128199500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002980	chr10	-	390	2	FSM	ENSMUSG00000090761.2	ENSMUST00000167226.2	390	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAACAGGAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	128231432	128227710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128227943_128231274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002981	chr10	-	891	5	ISM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	890	0	884	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	128244707	128237263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002982	chr10	-	655	3	NNC	ENSMUSG00000025374.14	novel	1371	6	NA	NA	1342	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	128244249	128237263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128237793_128244022_128244084_128244184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002983	chr10	-	531	1	NIC	ENSMUSG00000025374.14	novel	1371	6	NA	NA	7797	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	128237794	128237263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_128237300_128237800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002984	chr10	+	680	2	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	25613	1629	25613	-1629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCCCAAATATTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	128273227	128274578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128273281_128273951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002985	chr10	+	642	1	ISM	ENSMUSG00000025373.15	ENSMUST00000171342.3	3283	8	28043	1100	27954	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTCACCCCCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	128275568	128276210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128275600_128276200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002986	chr10	-	429	3	ISM	ENSMUSG00000090841.3	ENSMUST00000217969.2	608	6	1452	-3	1419	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTCTTTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128328274	128326728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128326903_128327927_128328006_128328097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002987	chr10	-	431	4	ISM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	1494	0	1461	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	128328232	128326729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002988	chr10	+	207	2	Antisense	novelGene_ENSMUSG00000090841.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCGCCTGCAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	128326758	128327996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_+_128326905_128327935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002989	chr10	-	167	2	ISM	ENSMUSG00000090841.3	ENSMUST00000219236.2	692	7	2498	64	2475	47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCATTTGGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128327218	128326795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128326903_128327158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002990	chr10	-	367	3	ISM	ENSMUSG00000090841.3	ENSMUST00000217776.2	562	7	1068	1125	1068	-1125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGGCATGAGGACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	128328625	128327967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128328006_128328097_128328272_128328470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002991	chr10	-	252	2	NNC	ENSMUSG00000090841.3	novel	1668	5	NA	NA	1129	-1265	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACACTGGGTAAGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	128328564	128328107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128328272_128328476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002992	chr10	-	306	4	ISM	ENSMUSG00000090841.3	ENSMUST00000217776.2	562	7	-53	1364	-2	-1364	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACCAGGGAACCTACGA	NA	NA	NA	NA	NA	NA	NA	NA	128329746	128328206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128328272_128328470_128328615_128329407_128329436_128329677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002993	chr10	-	299	3	ISM	ENSMUSG00000039824.5	ENST00000552568.5	543	5	1020	0	1020	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGGCAGGATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	128332267	128330458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128330537_128331021_128331097_128332121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002994	chr10	-	414	4	ISM	ENSMUSG00000039824.5	ENST00000552568.5	543	5	2	612	2	-612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACGTTCCTGCCCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	128333285	128331070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128331097_128332121_128332266_128332482_128332511_128333069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002995	chr10	-	259	2	NNC	ENSMUSG00000039824.5	novel	543	5	NA	NA	10	-1773	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGATGGCAAGATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	128333277	128332231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128332266_128333052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002996	chr10	-	2147	1	Genic_Genomic	ENSMUSG00000039810.12	novel	NA	NA	NA	NA	3667	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTAGGAATATTATTACC	NA	NA	NA	NA	NA	NA	NA	NA	128379976	128377829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128377800_128380000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002997	chr10	-	2184	2	ISM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	880	1459	880	-1459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGGGAAGGCACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128382763	128379290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128381408_128382696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002998	chr10	-	550	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177163.8	544	3	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTACGTGTTTTTTTGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	128385023	128383977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128384299_128384526_128384550_128384817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000002999	chr10	-	292	1	Genic_Genomic	ENSMUSG00000093674.8	novel	NA	NA	NA	NA	699	2	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTACGTGTTTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	128384272	128383980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128384000_128384300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003000	chr10	-	541	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	-3	2	intron_retention	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTACGTGTTTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	128385025	128383980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003001	chr10	-	538	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	2	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTACGTGTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	128385020	128383981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003002	chr10	-	511	2	NIC	ENSMUSG00000093674.8	novel	544	3	NA	NA	10	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128385012	128383982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_128384299_128384817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003003	chr10	-	524	2	NNC	ENSMUSG00000093674.8	novel	544	3	NA	NA	-20	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128384991	128383982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003004	chr10	-	327	3	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	71	-165	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACCTGGAACGTCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	128385103	128384153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384526_128384550_128384944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003005	chr10	-	399	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	0	183	0	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTCTCAGTAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	128385174	128384165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003006	chr10	-	337	3	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	53	-178	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGTCTCAGTAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	128385121	128384166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384802_128384843_128384956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003007	chr10	-	221	2	NNC	ENSMUSG00000093674.8	novel	509	3	NA	NA	-34	-232	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGGGATGCTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	128385065	128384220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384321_128384944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003008	chr10	-	232	2	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-45	-233	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGGGATGCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	128385076	128384221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003009	chr10	-	213	2	NIC	ENSMUSG00000093674.8	novel	509	3	NA	NA	-50	-244	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGAGCAGAAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	128385081	128384232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_-_128384321_128384956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003010	chr10	-	206	3	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-25	-247	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTGCAGGAGCAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128385056	128384235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384799_128384843_128384956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003011	chr10	-	168	2	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-27	-272	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGCCAGCCCGTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	128385058	128384260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003012	chr10	-	141	2	NNC	ENSMUSG00000093674.8	novel	582	4	NA	NA	-23	-279	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCCAAGTAAGCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	128385054	128384267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384299_128384944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003013	chr10	-	160	2	NNC	ENSMUSG00000093674.8	novel	509	3	NA	NA	-57	-537	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTAATTTTTCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	128385088	128384525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128384550_128384952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003014	chr10	+	196	2	Antisense	novelGene_ENSMUSG00000093674.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTACTAGAGTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	128384525	128385093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr10_+_128384568_128384939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003015	chr10	-	397	1	Genic_Genomic	ENSMUSG00000025364.14	novel	NA	NA	NA	NA	7774	2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTTCTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	128394029	128393632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128393600_128394000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003016	chr10	-	369	3	ISM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	5219	1668	5219	-1666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAAGTCTTTTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	128396584	128395302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128395402_128395950_128396164_128396527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003017	chr10	-	685	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCGGAGTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	128462618	128460403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003018	chr10	-	563	3	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	8	-669	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAAATTATTTTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	128462608	128461074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128461207_128461931_128462099_128462344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003019	chr10	-	565	3	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	0	-690	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACGATTCAGACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	128462616	128461095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128461207_128461931_128462110_128462340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003020	chr10	-	420	3	NNC	ENSMUSG00000025362.7	novel	681	4	NA	NA	115	-706	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACCGAACACCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	128462501	128461111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128461207_128461941_128462110_128462344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003021	chr10	-	569	1	Genic_Genomic	ENSMUSG00000049858.9	novel	NA	NA	NA	NA	3615	4	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCTCTTGGGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	128506327	128505758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128505800_128506300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003022	chr10	-	737	2	ISM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	1789	1477	1789	-1477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTGGTAACCGG	NA	NA	NA	NA	NA	NA	NA	NA	128508153	128507239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128507796_128507972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003023	chr10	-	710	4	FSM	ENSMUSG00000000711.4	ENST00000628569.1	496	4	-1	-213	-1	213	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACATCTCCCCAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	128522780	128515185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128522616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003024	chr10	-	259	3	NNC	ENSMUSG00000000711.4	novel	496	4	NA	NA	4013	-18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTGTAGCAACTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	128518766	128515416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_-_128515515_128517254_128517349_128518699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003025	chr10	-	276	2	ISM	ENSMUSG00000000711.4	ENST00000628569.1	496	4	19	3285	19	-3285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACAGAATCCCTAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	128522760	128518683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128518816_128522616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003026	chr10	-	1011	1	Genic_Genomic	ENSMUSG00000025358.17	novel	NA	NA	NA	NA	6055	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAATCTCTTTCATATT	NA	NA	NA	NA	NA	NA	NA	NA	128534817	128533806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128533800_128534800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003027	chr10	-	1341	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	2418	-851	2418	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTTGACCTGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	128538454	128534115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128535080_128535340_128535545_128538281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003028	chr10	-	359	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	1176	511	1176	-511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACCCCAGATGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	128539696	128535477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128535545_128538281_128538453_128539575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003029	chr10	-	526	3	ISM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	29	3344	29	-3344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCCTGTCCGAACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	128540843	128538310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128538453_128539575_128539697_128540580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003030	chr10	+	1071	4	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	7951	2437	7951	-2437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAACACGTGAATATGGA	NA	NA	NA	NA	NA	NA	NA	NA	128550148	128552420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128550298_128551089_128551225_128551395_128551558_128551795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003031	chr10	+	865	3	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	9240	1117	9240	-1117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCTATGTTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	128551437	128553740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128551558_128551795_128552420_128553619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003032	chr10	+	1152	5	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	9589	0	9589	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACACAGCTATCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	128551786	128554857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003033	chr10	+	629	5	ISM	ENSMUSG00000025359.11	ENST00000550464.5	1448	8	10090	0	10090	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACACAGCTATCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	128552287	128554857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003034	chr10	+	439	1	ISM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	18232	4	17593	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGGTCAGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	128601989	128602428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128602000_128602400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003035	chr10	+	395	3	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	12	4303	6	-4303	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGACTGAGCCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	128626835	128630525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128627014_128627453_128627540_128630394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003036	chr10	+	529	3	NNC	ENSMUSG00000025355.8	novel	2236	9	NA	NA	3563	-3153	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCATAAGAGTCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	128630392	128631675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_128630526_128630755_128630905_128631428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003037	chr10	+	374	2	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	4604	2444	4598	-2444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCCTTTCCACAACAG	NA	NA	NA	NA	NA	NA	NA	NA	128631427	128632384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128631675_128632257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003038	chr10	+	420	3	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	5434	395	5428	-395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACAGAACTGAGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	128632257	128634433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128632384_128633995_128634161_128634304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003039	chr10	+	346	2	ISM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	7480	38	7474	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGTGGTTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	128634303	128634790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128634433_128634573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003040	chr10	+	259	1	NIC	ENSMUSG00000025355.8	novel	2236	9	NA	NA	7741	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGGACGTTACTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	128634570	128634829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr10_+_128634600_128634800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003041	chr10	-	2196	4	ISM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	1014	0	-838	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	128639225	128635904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003042	chr10	+	818	2	ISM	ENSMUSG00000025354.6	ENST00000357606.7	3056	7	1	11326	1	-10664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGGACGCAGAGAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	128641410	128642708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128641557_128642036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003043	chr10	+	1661	3	ISM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	30	5114	30	-3358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTGAAATGGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	128641452	128650014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128641553_128642036_128643490_128649906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003044	chr10	+	893	4	ISM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	1394	677	1394	-677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTTACTTTGCGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	128642938	128652695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003045	chr10	+	1904	4	ISM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	9012	539	8890	-539	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACCCCATTTTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	128650434	128654589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128650555_128652580_128652742_128652826_128652930_128653069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003046	chr10	+	2014	1	Genic_Genomic	ENSMUSG00000025354.6	novel	NA	NA	NA	NA	11759	2	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTATGTCTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	128653303	128655317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_128653300_128655300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003047	chr10	-	861	1	Genic_Genomic	ENSMUSG00000025353.6	novel	NA	NA	NA	NA	2836	7	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTCCACTCTTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	128654624	128653763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128653800_128654600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003048	chr10	-	1121	3	ISM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	1173	-262	1158	262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTTATCTCCAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	128656302	128654088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128654885_128655822_128655975_128656129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003049	chr10	-	2412	1	Genic_Genomic	ENSMUSG00000025352.7	novel	NA	NA	NA	NA	7014	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATGGTGAGCTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	128720573	128718161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128718200_128720600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003050	chr10	-	2605	2	ISM	ENSMUSG00000025352.7	ENSMUST00000026408.7	4062	3	5305	853	5305	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGTGACTATCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	128722282	128719016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_-_128721356_128722016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003051	chr10	+	1067	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	6	-10	6	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTCAGTTTATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	128745573	128748694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003052	chr10	+	969	8	NNC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	92	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	128745659	128748691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_128745828_128746272_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003053	chr10	-	1091	4	FSM	ENSMUSG00000025350.16	ENST00000257895.10	1089	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACCTGTGGGAGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	128754431	128749437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128749792_128749999_128750168_128753748_128754008_128754121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003054	chr10	-	356	1	Genic_Genomic	ENSMUSG00000025350.16	novel	NA	NA	NA	NA	4524	2	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACCTGTGGGAGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	128749793	128749437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128749400_128749800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003055	chr10	-	553	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGTGTTTGAAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	128759394	128755780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003056	chr10	-	197	1	Genic_Genomic	ENSMUSG00000090247.8	novel	NA	NA	NA	NA	3415	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTGTTTGAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	128755978	128755781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_-_128755800_128756000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003057	chr10	+	528	3	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	-205	18729	24	-18729	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGAGCCAGGGGCCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	128769712	128775185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128770064_128774908_128775037_128775136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003058	chr10	+	538	4	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	6633	15208	6633	-15208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCTCAGAAGAGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	128776550	128778706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128776807_128777313_128777446_128777690_128777811_128778676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003059	chr10	+	757	4	ISM	ENSMUSG00000025348.10	ENSMUST00000218290.2	4020	25	6862	15001	6633	-14767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGGGGACCTCAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	128776550	128779147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128776807_128777313_128777446_128778676_128778885_128778986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003060	chr10	+	577	4	ISM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	7775	14436	7775	-14436	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCTTGGGGTGGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	128777692	128779478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128777811_128778676_128778885_128778986_128779181_128779421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003061	chr10	+	893	3	ISM	ENSMUSG00000025348.10	ENSMUST00000099112.4	4013	25	19940	-4	19709	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCTGCTTTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	128789626	128794155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_128789728_128789814_128789941_128793489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003062	chr10	+	668	1	Genic_Genomic	ENSMUSG00000025348.10	novel	NA	NA	NA	NA	23570	4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCTGCTTTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	128793487	128794155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr10_+_128793500_128794200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003063	chr10	-	760	1	FSM	ENSMUSG00000096858.5	ENSMUST00000078876.4	960	1	200	0	200	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGTTGGGACATGACT	NA	NA	NA	NA	NA	NA	NA	NA	129559211	129558451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr10_-_129558500_129559200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003064	chr10	+	310	4	NNC	ENSMUSG00000034833.11	novel	886	6	NA	NA	24	-5209	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTTAGAGGGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	130184054	130192771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr10_+_130184127_130190586_130190634_130191319_130191374_130192634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003065	chr10	+	891	5	ISM	ENSMUSG00000034833.11	ENST00000531122.5	833	6	6403	-1	6403	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGGCAAGCCCTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	130190486	130197981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_130190637_130191319_130191374_130192634_130192772_130196515_130196725_130197640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003066	chr10	+	271	1	ISM	ENSMUSG00000034833.11	ENSMUST00000042586.10	1663	9	38963	526	13626	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGGCAAGCCCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	130197709	130197980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr10_+_130197700_130198000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003067	chr11	+	193	2	ISM	ENSMUSG00000082286.12	ENSMUST00000145164.8	789	3	130	1750	28	-1750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTAAATAGGCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3076033	3077646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3076059_3077478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003068	chr11	-	1054	5	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	9678	0	9678	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3206715	3199906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003069	chr11	-	746	6	ISM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	3727	2347	3727	-2347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACACATCTCCAGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3212666	3202253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003070	chr11	-	670	5	NNC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	1501	-4612	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACAGGTACTCAGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	3214892	3204518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003071	chr11	+	731	1	ISM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	4706	0	4242	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3244698	3245429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3244700_3245400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003072	chr11	+	486	3	ISM	ENSMUSG00000034614.15	ENST00000441972.5	1535	5	15	10124	15	-1736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTCGCCCTGGGACCACG	NA	NA	NA	NA	NA	NA	NA	NA	3280759	3282228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3281005_3281914_3282036_3282108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003073	chr11	+	426	3	ISM	ENSMUSG00000034614.15	ENST00000441972.5	1535	5	1190	8939	1127	-551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTACGTGGGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	3281934	3283413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3282036_3282108_3282229_3283208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003074	chr11	+	436	2	ISM	ENSMUSG00000034614.15	ENST00000441972.5	1535	5	2460	602	2397	-602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAACACTGGTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3283204	3291750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3283413_3291522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003075	chr11	+	1372	3	ISM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	2806	362	2399	257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACTGGTACAAAACAATC	NA	NA	NA	NA	NA	NA	NA	NA	3283206	3292609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3283413_3283504_3283584_3291522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003076	chr11	+	1136	1	ISM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	11435	0	11028	0	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGTGGTGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	3291835	3292971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3291800_3293000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003077	chr11	-	718	1	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	11168	0	11168	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3294973	3294255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3294300_3295000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003078	chr11	-	465	5	ISM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	7879	-2	5721	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGGACTCGCCACCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	3300420	3295759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297671_3300391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003079	chr11	-	533	5	ISM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	4834	1841	2676	-1841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGATGGCCCCCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	3303465	3297602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3297671_3300391_3300449_3300641_3300774_3302290_3302378_3303276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003080	chr11	-	606	4	ISM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	670	6385	670	-4879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCACGTGACCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3305471	3300640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3300774_3302290_3302378_3303276_3303464_3305272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003081	chr11	-	680	4	ISM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	4	7511	4	-7511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGGAAGCAGCCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	3308295	3303272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3303464_3305272_3305470_3305810_3305917_3308109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003082	chr11	-	785	3	NNC	ENSMUSG00000020448.17	novel	800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTCCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3382575	3367600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_3368088_3369861_3369980_3382395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003083	chr11	-	806	3	NNC	ENSMUSG00000020448.17	novel	800	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTCCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3382576	3367600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_3368088_3369861_3369980_3382375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003084	chr11	-	800	4	FSM	ENSMUSG00000020448.17	ENST00000266252.8	800	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCCACTCCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3382575	3367600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_3368088_3369861_3369980_3378883_3378903_3382399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003085	chr11	-	143	2	ISM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	25685	9325	5897	-7706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCCAGAGCCAGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	3376678	3375306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3375337_3376565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003086	chr11	-	153	2	ISM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	55	16586	55	-14967	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGGCCTTCGGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3402308	3382567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3382621_3402208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003087	chr11	+	1120	4	ISM	ENSMUSG00000034579.18	ENST00000215885.4	1949	7	7	2450	7	-2450	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACCTGATATGATCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	3438211	3441016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3438854_3439761_3439895_3440142_3440278_3440806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003088	chr11	+	1089	5	ISM	ENSMUSG00000034579.18	ENST00000215885.4	1949	7	2018	-2	1939	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGTGGCTGATTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	3440222	3443468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3440278_3440806_3441091_3441891_3442022_3442125_3442247_3442969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003089	chr11	+	595	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	114	-2	114	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTCTCTTCTTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	3464980	3467353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003090	chr11	+	421	4	NNC	ENSMUSG00000075702.11	novel	707	5	NA	NA	1392	-78	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACGGAAATGGGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	3466258	3467273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_3466297_3466485_3466518_3466841_3466921_3467001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003091	chr11	+	354	1	Genic_Genomic	ENSMUSG00000075702.11	novel	NA	NA	NA	NA	2132	1	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGAGTCTCTTCTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	3466998	3467352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_3467000_3467400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003092	chr11	-	304	1	ISM	ENSMUSG00000020439.18	ENST00000347557.6	2945	19	19562	0	10112	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTCTCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3467825	3467521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3467500_3467800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003093	chr11	-	316	2	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	15478	82	6028	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCACTGCTGCCCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	3471909	3467604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3467828_3471816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003094	chr11	-	181	2	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	16494	170	7044	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCAAGAATGTCTAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	3470893	3467692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3467828_3470847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003095	chr11	-	199	2	ISM	ENSMUSG00000020439.18	ENSMUST00000020718.10	1747	9	5995	3321	5995	-3321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACACGTACATCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3471942	3470843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3470917_3471816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003096	chr11	-	438	3	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	14436	4307	4986	-4307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCCGCTGAGTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3472951	3471829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3471969_3472460_3472579_3472770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003097	chr11	-	225	2	ISM	ENSMUSG00000020439.18	ENSMUST00000020718.10	1747	9	3211	5295	3211	-5295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGCCATGATTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	3474726	3472817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3472949_3474632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003098	chr11	-	143	2	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	12442	7124	2992	-7124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATGGGCAGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	3474945	3474646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3474727_3474882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003099	chr11	-	230	2	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	12179	7360	2729	-7360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCCACCTGCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3475208	3474882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3474946_3475041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003100	chr11	-	313	3	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	10947	7560	1497	-7560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCGGCACAGTTACCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3476440	3475082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3475207_3476164_3476241_3476327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003101	chr11	-	405	3	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	7772	8642	-1678	-8642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGAGCCAGCTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3479615	3476164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3476241_3476327_3476481_3479439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003102	chr11	-	477	2	ISM	ENSMUSG00000020439.18	ENSMUST00000020718.10	1747	9	186	8805	186	-8805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTAGTTAGCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3477751	3476327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3476481_3477427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003103	chr11	-	871	4	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	7150	8824	-2300	-8824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCCTGGACAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	3480237	3476346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3476481_3477427_3477521_3479439_3479613_3479766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003104	chr11	-	302	3	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	7523	8927	-1927	-8927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTGGAAGCAGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	3479864	3476449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3476481_3479439_3479613_3479766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003105	chr11	-	848	4	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	6943	9914	-2507	-9914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCTCGTAAGTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	3480444	3477436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3477521_3479439_3479613_3479766_3480283_3480369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003106	chr11	-	347	2	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	5912	13522	-3538	-13522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGCCCTGTTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	3481475	3481044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3481118_3481201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003107	chr11	-	376	2	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	4878	13723	-4572	-13723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGCCGGTACCGTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	3482509	3481245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3481523_3482410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003108	chr11	-	273	3	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	4533	14886	4533	-14886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTATGGGCGTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	3482854	3482408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3482509_3482597_3482677_3482760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003109	chr11	-	215	2	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	3876	15254	3876	-15254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTGACCACACTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	3483511	3482776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3482855_3483374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003110	chr11	-	212	2	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	2	15852	2	-15852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCAGAGGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	3487385	3483374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3483524_3487322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003111	chr11	-	177	1	FSM	ENSMUSG00002075304.1	ENSMUST00020182243.1	177	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTAATCTCCTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3594952	3594775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_3594800_3595000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003112	chr11	-	247	1	FSM	ENSMUSG00002076556.1	ENSMUST00020182120.1	236	1	-9	-2	-9	2	mono-exon	FALSE	NA	NA	NA	NA	NA	570	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTCAAGAGTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	3595530	3595283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_3595300_3595500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003113	chr11	-	153	1	FSM	ENSMUSG00002075685.1	ENSMUST00020183261.1	147	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTAAGTGTATTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	3597325	3597172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_3597200_3597300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003114	chr11	+	769	1	Genic_Genomic	ENSMUSG00000047205.13	novel	NA	NA	NA	NA	5291	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCATCCTCAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	3850530	3851299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_3850500_3851300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003115	chr11	-	2445	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	615	-1	615	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTCATTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3864049	3857020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_3857985_3862568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003116	chr11	-	3014	2	NNC	ENSMUSG00000048807.3	novel	3063	2	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTCATTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3864614	3857020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_3857985_3862564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003117	chr11	-	843	4	ISM	ENSMUSG00000020432.13	ENSMUST00000109992.8	1945	10	8351	0	8351	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	3873438	3867191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003118	chr11	+	1809	5	ISM	ENSMUSG00000020430.13	ENSMUST00000109985.8	2923	15	12797	0	12797	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGCTGCCCATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	3926771	3930004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003119	chr11	-	1182	3	ISM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	928	0	773	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4044517	4041479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_4042300_4043800_4044034_4044388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003120	chr11	-	176	1	NIC	ENSMUSG00000004748.6	novel	1411	4	NA	NA	1321	5	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGGTCTCAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	4043969	4043793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_4043800_4044000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003121	chr11	-	372	3	FSM	ENSMUSG00000004748.6	ENST00000407550.3	369	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTTTCTGGTCTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	4045291	4043796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_4043965_4044388_4044517_4045215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003122	chr11	+	344	2	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	166	5211	166	-5211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGTGTTTGAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	4085367	4085961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4085564_4085813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003123	chr11	+	276	3	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	611	4402	611	-4402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGCTGTTGGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	4085812	4086770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4085958_4086559_4086632_4086711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003124	chr11	+	243	2	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	2045	1313	2045	-1313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGCCAGACGGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4087246	4089859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4087369_4089738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003125	chr11	+	286	3	ISM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	4624	766	4624	-766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGGCCAGGTGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	4089825	4090406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4089859_4089934_4090079_4090297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003126	chr11	+	275	1	Genic_Genomic	ENSMUSG00000003581.15	novel	NA	NA	NA	NA	5701	5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTAAGACATAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	4090902	4091177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_4090900_4091200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003127	chr11	+	307	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	16	21374	16	-21374	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACAGCTGCTTCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	4110365	4111167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4110551_4111045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003128	chr11	+	280	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	692	15892	692	-15892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGGTTATGCAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	4111041	4116649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4111168_4116495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003129	chr11	+	382	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	6230	14651	6230	-14651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGGTTTGGGTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	4116579	4117890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4116704_4117632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003130	chr11	+	284	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	7281	11456	7281	-11456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCAAAGCTCAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	4117630	4121085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4117891_4121061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003131	chr11	+	433	3	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	12741	7401	12741	-7401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATCCCAAAGGTACGGT	NA	NA	NA	NA	NA	NA	NA	NA	4123090	4125140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4123231_4124031_4124220_4125035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003132	chr11	+	299	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	15057	6147	15057	-6147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCCAGTGAATCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	4125406	4126394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4125581_4126269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003133	chr11	+	291	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	15968	5844	15968	-5844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTACATCAGTGCCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	4126317	4126697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4126392_4126480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003134	chr11	+	283	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	16198	5025	16198	-5025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCCACCCATCATCCACG	NA	NA	NA	NA	NA	NA	NA	NA	4126547	4127516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4126727_4127412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003135	chr11	+	286	2	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	17062	4394	17062	-4394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGATGAGCCTCCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	4127411	4128147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4127621_4128070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003136	chr11	+	274	3	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	18789	2410	18789	-2410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCAAGAGATACTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	4129138	4130131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4129243_4129353_4129426_4130033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003137	chr11	+	295	1	ISM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	21897	0	21897	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCTCCATTATCCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	4132246	4132541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4132200_4132500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003138	chr11	+	828	2	ISM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	27070	74	27070	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGGGAGGCGGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	4163891	4165428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4163992_4164700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003139	chr11	+	761	1	Genic_Genomic	ENSMUSG00000034412.14	novel	NA	NA	NA	NA	27925	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTATAGTTAGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	4164746	4165507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_4164700_4165500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003140	chr11	-	306	1	NIC	ENSMUSG00000059534.9	novel	536	2	NA	NA	2110	0	mono-exon	FALSE	NA	NA	NA	NA	NA	546	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCCAAGCCCCATGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	4652221	4651915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_4651900_4652200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003141	chr11	-	437	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTTTGCACGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4654345	4651972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_4652221_4654156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003142	chr11	-	134	2	FSM	ENSMUSG00000059534.9	ENST00000401406.3	536	2	129	273	129	-216	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAGGAGTAACACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4654202	4652188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_4652221_4654100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003143	chr11	-	460	1	ISM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	83232	0	82681	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4716304	4715844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_4715800_4716300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003144	chr11	-	190	2	ISM	ENSMUSG00000009073.17	ENST00000334961.11	1751	14	54722	10513	54507	-10513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTGGTGTTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	4744478	4741090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_4741214_4744411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003145	chr11	-	652	3	ISM	ENSMUSG00000009073.17	ENST00000361452.8	2122	16	21	47919	21	-35528	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTCATATGCTGTCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	4799337	4766105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_4766166_4770367_4770494_4798871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003146	chr11	+	1140	3	ISM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	15940	121	15940	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTAGGTTGTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	4839890	4844079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4839987_4841402_4841487_4843119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003147	chr11	+	983	1	Genic_Genomic	ENSMUSG00000034285.16	novel	NA	NA	NA	NA	19268	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGGTGTTGTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4843218	4844201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_4843200_4844200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003148	chr11	+	1232	2	ISM	ENSMUSG00000009090.18	ENSMUST00000101613.3	3735	21	30735	-63	30732	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGGCTATGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	4990264	4992792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_4990422_4991717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003149	chr11	-	1452	1	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	3454	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	5011823	5010371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_5010400_5011800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003150	chr11	-	1695	4	ISM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	2595	-1	2575	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTTTTGGGGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	5012702	5010500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003151	chr11	-	694	4	ISM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	1047	1761	1027	-1761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGCCCCGGTAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5014250	5012262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003152	chr11	-	699	2	ISM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	236	3663	186	-3533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCGCCCGGCGTGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	5015091	5014034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5014479_5014836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003153	chr11	-	491	3	ISM	ENSMUSG00000009079.17	ENST00000550416.1	666	5	5586	-1	5586	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCAGGCTCCAAGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	5038147	5033412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5033548_5035895_5036064_5037959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003154	chr11	+	296	2	Antisense	novelGene_ENSMUSG00000009079.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGTGGTCTAAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	5033412	5036053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_+_5033558_5035902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003155	chr11	-	482	3	ISM	ENSMUSG00000009079.17	ENST00000550416.1	666	5	1748	2482	1748	-2482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTCTCATTTTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5041985	5035895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5036064_5037959_5038147_5041858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003156	chr11	-	363	3	ISM	ENSMUSG00000009079.17	ENST00000550416.1	666	5	1	4546	1	2499	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTCATAGTTGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	5043732	5037959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5038147_5041858_5041983_5043680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003157	chr11	-	662	1	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	69345	0	69345	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGTGAGGCCAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5142213	5141551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5141600_5142200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003158	chr11	-	1271	4	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	59529	2927	59529	-2927	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTGAGAGCAGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	5152029	5144478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003159	chr11	-	681	3	ISM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	51483	7949	51483	-7949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCTTTCAATACTTACA	NA	NA	NA	NA	NA	NA	NA	NA	5160075	5149500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5149712_5151696_5152030_5159938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003160	chr11	+	269	2	ISM	ENSMUSG00000020484.20	ENSMUST00000239150.2	1116	6	34	3223	34	-2924	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGGACTTCAGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	5471028	5472019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5471201_5471922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003161	chr11	+	355	3	ISM	ENSMUSG00000020484.20	ENSMUST00000149623.8	897	4	258	584	258	-584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGCCTCTTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	5471920	5474359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5472020_5473332_5473468_5474238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003162	chr11	+	319	2	ISM	ENSMUSG00000020484.20	ENSMUST00000149623.8	897	4	2574	88	2574	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTAATGAACTCATTCG	NA	NA	NA	NA	NA	NA	NA	NA	5474236	5474855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5474385_5474684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003163	chr11	+	206	1	Genic_Genomic	ENSMUSG00000020484.20	novel	NA	NA	NA	NA	4027	2	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTCTGTGATTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	5475689	5475895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_5475700_5475900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003164	chr11	-	340	1	ISM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	12961	0	12961	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTGTAATCCTGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	5479226	5478886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5478900_5479200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003165	chr11	-	346	3	ISM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	7335	2527	7335	-2527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGCACTGCGTTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	5484852	5481413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5481534_5484242_5484381_5484764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003166	chr11	-	357	2	ISM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	7	12484	7	-12484	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATCCAGACCAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5492180	5491370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5491424_5491876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003167	chr11	+	320	1	FSM	ENSMUSG00000081021.2	ENSMUST00000120982.2	444	1	311	-187	311	187	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCATCTTTGGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5584449	5584769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_5584400_5584800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003168	chr11	-	1939	1	ISM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	24242	1553	10105	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCAAATGACAGTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5666908	5664969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5665000_5666900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003169	chr11	-	1239	2	ISM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	4171	1381	4171	-1381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTGTCAGAAGGCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	5672842	5667065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5668264_5672801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003170	chr11	-	223	4	FSM	ENSMUSG00000049680.18	ENST00000446958.1	222	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCATTTTCTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5691158	5672801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_5672841_5673110_5673162_5676347_5676419_5691096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003171	chr11	+	1350	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	74	422	-14	-422	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGAAGCCAGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5712202	5731454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_5712241_5715508_5715572_5730205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003172	chr11	+	1293	1	ISM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	18455	0	18367	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTGTTGTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5730583	5731876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5730600_5731900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003173	chr11	+	351	4	ISM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	7	5984	-1	-5984	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGGTAGGTGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	5738528	5744304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003174	chr11	+	416	4	ISM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	5714	3150	5706	-3150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACCAGGAACAGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	5744235	5747138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5744312_5745447_5745595_5746745_5746824_5747023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003175	chr11	+	352	5	ISM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	7049	2988	7007	-2647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCCCACACCCACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	5745536	5747641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003176	chr11	+	545	3	ISM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	9692	102	9684	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGCAGCCTCTAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	5748213	5750186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5748326_5749233_5749340_5749859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003177	chr11	+	336	1	ISM	ENSMUSG00000020476.15	ENSMUST00000102928.5	2295	13	11765	332	11765	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCAGCCCATCCATG	NA	NA	NA	NA	NA	NA	NA	NA	5750294	5750630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5750300_5750600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003178	chr11	-	202	1	NIC	ENSMUSG00000020475.4	novel	840	3	NA	NA	1892	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCACGTTTCATATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	5751841	5751639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_5751600_5751800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003179	chr11	-	338	2	ISM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	279	1382	279	-1382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATTGTGAAACATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5753454	5753021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5753180_5753274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003180	chr11	-	573	1	ISM	ENSMUSG00000020474.12	ENSMUST00000109837.8	2697	11	9357	0	9324	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTTTTACAAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	5778432	5777859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5777900_5778400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003181	chr11	+	706	2	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	76	7820	76	-7820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGAGGTTTGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5812022	5814268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5812399_5813938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003182	chr11	+	596	4	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	1990	6778	1990	-6778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGTAGGAAGCAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5813936	5815310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5814278_5814823_5814896_5815016_5815089_5815199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003183	chr11	+	446	4	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	72	3469	72	-3469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAAGAGGGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	5817673	5818619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5817750_5817819_5817960_5818296_5818382_5818474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003184	chr11	+	374	3	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	1163	2477	1163	-2477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTCAGTGTGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5818764	5819611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5818817_5819064_5819189_5819413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003185	chr11	+	473	3	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	1493	2200	1493	-2200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGTGCACCCTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	5819094	5819888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5819189_5819413_5819611_5819706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003186	chr11	+	730	3	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	1811	1661	1811	-1661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCTGGGAAGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5819412	5820427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5819611_5819706_5819887_5820075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003187	chr11	+	593	3	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	2473	1236	2473	-1236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTTGCATGCACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5820074	5820852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5820428_5820513_5820654_5820752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003188	chr11	+	673	3	ISM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	2912	411	2912	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGAGACCTATACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	5820513	5821677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5820654_5820752_5820853_5821244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003189	chr11	+	605	1	ISM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	9537	0	3882	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCCTGTTCTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	5821483	5822088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5821500_5822100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003190	chr11	-	868	6	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	4110	-1	4110	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACTTGGGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	5824182	5822178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003191	chr11	+	537	1	ISM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	11551	0	11551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTGTTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	5917243	5917780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_5917200_5917800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003192	chr11	-	292	2	ISM	ENSMUSG00000057897.15	ENST00000350811.7	2289	21	93167	522	93092	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACAGACACTCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	5922446	5920179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5920242_5922216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003193	chr11	-	267	2	ISM	ENSMUSG00000057897.15	ENSMUST00000101586.3	1590	19	92844	62	92812	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCAAGTGGCAGAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	5922726	5922278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_5922451_5922631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003194	chr11	-	2261	1	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	92464	0	92464	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGTTTATCTGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	6057951	6055690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_6055700_6058000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003195	chr11	-	2546	4	ISM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	49892	481	49892	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGCCTGTTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	6100523	6056171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003196	chr11	-	1521	3	ISM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	283	11104	283	-11104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGGCCCTGCAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	6179075	6175119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_6175293_6175628_6175730_6177828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003197	chr11	+	183	1	FSM	ENSMUSG00000081153.2	ENSMUST00000117212.2	344	1	280	-119	280	119	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	6192657	6192840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_6192700_6192800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003198	chr11	-	1975	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	35	-7	35	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTTTGTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	6224835	6220361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003199	chr11	+	1133	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	50	-13	50	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAGTGGTATAGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	6365492	6369830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003200	chr11	+	535	3	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	118	-1489	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATTAAATTGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	6365560	6368315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_6365985_6368110_6368132_6368225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003201	chr11	+	700	4	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	121	-533	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGACTGAATGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	6365563	6369271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_6365985_6368100_6368132_6368225_6368315_6369112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003202	chr11	+	697	3	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	128	-518	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAACAGTGAATGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	6365570	6369286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_6366005_6368225_6368315_6369112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003203	chr11	-	430	2	Antisense	novelGene_ENSMUSG00000071866.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCGTCGGGGCCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	6368132	6365576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_6365973_6368098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003204	chr11	+	678	3	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	137	-518	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAAACAGTGAATGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	6365579	6369286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_6365995_6368225_6368315_6369112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003205	chr11	+	662	3	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	145	-523	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGTAAGAAACAGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	6365587	6369281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_6365992_6368225_6368315_6369112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003206	chr11	-	449	2	Antisense	novelGene_ENSMUSG00000071866.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCGAGGGCAGTTAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	6368305	6365625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_6365973_6368203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003207	chr11	+	571	3	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	199	-553	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTTTTATCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	6365641	6369251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_6365985_6368225_6368315_6369112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003208	chr11	+	552	4	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	-212	-538	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGCCAAGACTGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	6365694	6369266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_6365980_6368100_6368132_6368225_6368308_6369112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003209	chr11	+	1452	5	FSM	ENSMUSG00000071866.13	ENSMUST00000213200.2	1450	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAACTGTTTGTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6366311	6369806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_6367142_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003210	chr11	+	447	3	NNC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	1910	-139	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGTCCCTACCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	6368221	6369665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_6368308_6369112_6369286_6369477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003211	chr11	+	472	2	ISM	ENSMUSG00000071866.13	ENSMUST00000213200.2	1450	5	2792	37	2792	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAAAGTTAAGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	6369103	6369767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_6369286_6369477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003212	chr11	-	510	2	Antisense	novelGene_ENSMUSG00000071866.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAATCAGATAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	6369817	6369110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_6369279_6369475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003213	chr11	+	345	1	NIC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	3161	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	6369472	6369817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_6369500_6369800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003214	chr11	-	374	2	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGAATGATAACCAC	NA	NA	NA	NA	NA	NA	NA	NA	6388146	6369476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr11_-_6369813_6388108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003215	chr11	-	402	2	Antisense	novelGene_ENSMUSG00000071866.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGAATGATAACCAC	NA	NA	NA	NA	NA	NA	NA	NA	6376018	6369476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_6369813_6375952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003216	chr11	-	620	1	Genic_Genomic	ENSMUSG00000041126.17	novel	NA	NA	NA	NA	16508	4	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCTGGTCCTGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	6377844	6377224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_6377200_6377800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003217	chr11	-	980	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	12	641	12	268	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAATCAATTTTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	6394431	6377869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003218	chr11	-	298	1	NIC	ENSMUSG00000041126.17	novel	1633	5	NA	NA	15918	1	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTCTCAGTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	6378434	6378136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_6378100_6378400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003219	chr11	-	356	3	ISM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	4897	149	4897	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGACGAGACAAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	6389455	6378286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_6378433_6379095_6379226_6389375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003220	chr11	+	434	1	FSM	ENSMUSG00000079988.3	ENSMUST00000116105.3	320	1	-1	-113	-1	113	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCAAATGTCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	6396216	6396650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_6396200_6396600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003221	chr11	-	606	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	6478774	6475590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003222	chr11	+	584	4	ISM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	1	11527	1	-11505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGATTGGCTGGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	6496887	6535217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003223	chr11	+	831	3	ISM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	23640	89	23640	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCCAGTCCTGCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	6543601	6546633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_6543741_6544147_6544287_6546080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003224	chr11	+	608	1	Genic_Genomic	ENSMUSG00000000378.16	novel	NA	NA	NA	NA	26193	2	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCTATTCTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	6546154	6546762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_6546200_6546800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003225	chr11	-	520	3	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	8413	0	8413	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTATCTTCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	6567630	6566422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_6566715_6567307_6567423_6567517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003226	chr11	-	945	3	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	1758	3570	1758	-3570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTGGCCTACGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	6574285	6569992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_6570144_6570741_6571066_6573815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003227	chr11	-	636	3	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	830	4540	830	-4540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTGGCGTCTGCGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	6575213	6570962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_6571066_6573815_6574284_6575148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003228	chr11	+	309	1	ISM	ENSMUSG00000041046.8	ENSMUST00000045374.8	1233	3	18646	0	18646	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTATTTCTCATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	6627166	6627475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_6627200_6627500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003229	chr11	-	250	2	ISM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	5386	1314	5386	286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGAGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	7158511	7157399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_7157507_7158368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003230	chr11	-	324	2	ISM	ENSMUSG00000020427.12	ENSMUST00000135887.3	1709	4	3682	1792	3656	-1792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCTATAAGAAGAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	7160241	7159477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_7159579_7160018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003231	chr11	-	358	2	ISM	ENSMUSG00000020427.12	ENSMUST00000135887.3	1709	4	358	2383	332	-2383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGACACCCAGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	7163565	7160068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_7160246_7163384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003232	chr11	-	1013	1	ISM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	17042	0	17042	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	8944149	8943136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_8943100_8944100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003233	chr11	-	759	5	ISM	ENSMUSG00000040985.14	ENST00000395572.6	1124	9	10199	0	10199	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCCAACACTCTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	8978117	8966059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_8966357_8968146_8968240_8971751_8971920_8973293_8973410_8978032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003234	chr11	+	1605	5	FSM	ENSMUSG00000040978.5	ENST00000348904.4	1603	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTAATGCAGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	9004207	9019348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_9004319_9006421_9006579_9009910_9010009_9011165_9011391_9018334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003235	chr11	+	340	2	ISM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	16213	876	16213	-873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCTGTGGCCTGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	9084719	9085291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_9084932_9085163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003236	chr11	+	338	2	ISM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	16676	-3	16676	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	9085182	9086170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_9085311_9085960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003237	chr11	-	2477	1	Genic_Genomic	ENSMUSG00000035455.13	novel	NA	NA	NA	NA	6169	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGTAGTCTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	11752763	11750286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_11750300_11752800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003238	chr11	-	1260	2	ISM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	2741	1639	2714	-1375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCACACCTCACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	11756218	11751926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_11753064_11756095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003239	chr11	-	540	4	ISM	ENSMUSG00000020182.17	ENST00000426377.5	1148	10	42735	-2	42735	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGACTGACTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	11772294	11764397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003240	chr11	-	585	5	ISM	ENSMUSG00000020182.17	ENST00000426377.5	1148	10	29223	811	29223	-811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTAGCTGCACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	11785806	11765210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003241	chr11	-	478	5	ISM	ENSMUSG00000020182.17	ENST00000426377.5	1148	10	1232	14678	1232	-14678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACTGTGATTAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	11813797	11779077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003242	chr11	-	490	5	ISM	ENSMUSG00000020182.17	ENST00000426377.5	1148	10	21	21341	21	-21341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTCTCTGTTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	11815008	11785740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003243	chr11	-	322	1	ISM	ENSMUSG00000020173.18	ENSMUST00000172919.8	2566	8	227807	68	175147	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	12186997	12186675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_12186700_12187000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003244	chr11	-	378	2	ISM	ENSMUSG00000020173.18	ENSMUST00000174874.8	5451	15	155904	18012	155904	-18012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCTGATCCCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	12206240	12204689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_12204972_12206144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003245	chr11	-	885	6	FSM	ENSMUSG00000020173.18	ENST00000632460.1	929	6	47	-3	29	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACACACAAGTGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	12414775	12319589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_12319692_12323328_12323374_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003246	chr11	+	120	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAAGCTGAGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	12598340	12598460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr11_+_12598300_12598500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003247	chr11	+	464	1	FSM	ENSMUSG00000081631.2	ENSMUST00000121451.2	379	1	-18	-67	-18	67	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCATAGAAAATTCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	14112060	14112524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_14112100_14112500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003248	chr11	+	2528	5	FSM	ENSMUSG00000048834.17	ENST00000402613.4	2817	5	215	74	104	-74	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATCTTTCCTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	16207906	16233755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_16208087_16209854_16210022_16211437_16211489_16212913_16213251_16231962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003249	chr11	+	1792	2	NNC	ENSMUSG00000048834.17	novel	2817	5	NA	NA	5120	-396	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGTTCTAATTACATCT	NA	NA	NA	NA	NA	NA	NA	NA	16212922	16233433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_16213251_16231969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003250	chr11	+	1825	1	ISM	ENSMUSG00000048834.17	ENSMUST00000109645.9	3264	5	24284	354	24205	3	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATACTTTATTAACATA	NA	NA	NA	NA	NA	NA	NA	NA	16232007	16233832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16232000_16233800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003251	chr11	-	286	1	Genic_Genomic	ENSMUSG00000078974.11	novel	NA	NA	NA	NA	7257	3	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGATGCAGCAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	16450812	16450526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_16450500_16450800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003252	chr11	-	169	1	ISM	ENSMUSG00000078974.11	ENSMUST00000109643.8	1862	4	6930	856	6515	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCAGGGCTTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	16451554	16451385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_16451400_16451600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003253	chr11	-	836	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	-2	-80	-2	80	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAACAATTGCTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	16458486	16451557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003254	chr11	-	736	4	NNC	ENSMUSG00000078974.11	novel	754	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTATCAAATTTTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	16458468	16451637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_16451808_16454737_16454839_16456372_16456473_16458103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003255	chr11	-	599	3	ISM	ENSMUSG00000078974.11	ENSMUST00000178855.8	779	4	2	3106	2	-3093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTGTGTAAGTCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	16458482	16454743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_16454839_16456372_16456473_16458078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003256	chr11	-	166	2	ISM	ENSMUSG00000078974.11	ENSMUST00000109642.8	691	4	2	4985	2	-4721	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACTATCTTGGTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	16458164	16456371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_16456473_16458099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003257	chr11	+	482	4	ISM	ENSMUSG00000020122.17	ENST00000454757.6	3405	26	46	43628	46	-19695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTCTGGCTACTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	16808939	16818228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16809048_16810067_16810252_16817230_16817300_16818107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003258	chr11	+	494	4	ISM	ENSMUSG00000020122.17	ENST00000454757.6	3405	26	1172	42518	1172	-18585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTGTGAAGAAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	16810065	16819338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16810252_16817230_16817300_16818107_16818227_16819218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003259	chr11	+	472	4	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	12709	36697	12709	-12764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTAGCTGGTCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	16821602	16825159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16821710_16821801_16821876_16822845_16822937_16824959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003260	chr11	+	476	5	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	24642	18749	24642	5184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTTCTTTTATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	16833535	16843107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003261	chr11	+	471	4	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	31049	14826	31049	9107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATTGGCTCCCAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	16839942	16847030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16840055_16841177_16841301_16843007_16843107_16846893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003262	chr11	+	568	4	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	32282	7394	32282	-7394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCTGGGAGTAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	16841175	16854462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16841301_16843007_16843107_16846893_16847080_16854304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003263	chr11	+	490	4	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	37999	5050	37999	-5050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATCCTAGAGAAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	16846892	16856806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16847080_16854304_16854461_16855347_16855424_16856735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003264	chr11	+	521	3	ISM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	51313	-2	51313	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGGCATCATACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	16860206	16861858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_16860260_16860793_16860897_16861493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003265	chr11	+	367	1	NIC	ENSMUSG00000020122.17	novel	10208	28	NA	NA	52598	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGGCATCATACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	16861491	16861858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_16861500_16861900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003266	chr11	+	427	3	FSM	ENSMUSG00000044629.6	ENST00000409559.7	423	3	-1	-3	-1	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTCAAATTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	17002168	17057635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_17002349_17004630_17004782_17057539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003267	chr11	+	587	2	ISM	ENSMUSG00000044629.6	ENSMUST00000058159.6	1654	3	2895	454	2543	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATTAAGATAACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	17004712	17028917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_17004782_17028399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003268	chr11	+	565	1	Genic_Genomic	ENSMUSG00000044629.6	novel	NA	NA	NA	NA	26638	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCGACTTGAACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	17028807	17029372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_17028800_17029400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003269	chr11	+	185	2	ISM	ENSMUSG00000033953.11	ENST00000234310.8	2601	6	35426	2045	35426	-2045	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTTCTTCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	17144740	17148330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_17144854_17148258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003270	chr11	+	165	1	ISM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	40948	0	40896	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	17150210	17150375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_17150200_17150400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003271	chr11	-	1056	4	ISM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	2429	0	2429	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	17159139	17153197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003272	chr11	-	963	3	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	2690	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	17158878	17153197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_17154002_17154500_17154572_17158790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003273	chr11	+	1409	4	ISM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	15277	-4	15277	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGAGGCGTTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	17177194	17183800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_17177277_17178140_17178276_17179768_17179867_17182706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003274	chr11	+	707	4	ISM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	5052	2211	5052	231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTTTGAAATGAACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	17212645	17216965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_17212795_17213608_17213676_17213950_17214007_17216530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003275	chr11	+	521	1	Genic_Genomic	ENSMUSG00000000581.9	novel	NA	NA	NA	NA	11068	6	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGTTGTCACTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	17218661	17219182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_17218700_17219200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003276	chr11	-	1350	2	FSM	ENSMUSG00000085675.2	ENSMUST00000143311.2	1340	2	0	-10	0	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGAACTAGCACCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	18443255	18417468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_18418760_18443196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003277	chr11	-	896	1	Genic_Genomic	ENSMUSG00000099449.2	novel	NA	NA	NA	NA	41447	3	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACATACACAAGCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	18665286	18664390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_18664400_18665300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003278	chr11	-	1029	3	FSM	ENSMUSG00000099449.2	ENST00000653254.1	1166	3	-1	138	-1	-138	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAATTAACTGGAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	18706734	18664531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_18665404_18706444_18706497_18706629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003279	chr11	-	1459	2	ISM	ENSMUSG00000020160.19	ENST00000272369.14	4564	14	138207	-1	134122	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTCCTTTTACTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	18830759	18829154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_18829345_18829490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003280	chr11	-	1231	1	ISM	ENSMUSG00000020160.19	ENST00000272369.14	4564	14	137269	1311	133184	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCTTAGCATTTAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	18831697	18830466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_18830500_18831700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003281	chr11	-	1428	2	ISM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	130799	123	130799	72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAACTGAGTGGGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	18834082	18830589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_18831923_18833987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003282	chr11	+	790	2	FSM	ENSMUSG00000087507.2	ENSMUST00000152073.2	790	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTCGAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	18963816	18965154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_18963998_18964545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003283	chr11	-	1842	1	ISM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	48768	0	48727	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTTGTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	20014145	20012303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20012300_20014100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003284	chr11	-	2083	3	ISM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	35580	752	35539	-752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTCAGCTGCTCGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20027333	20013055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20014860_20022455_20022589_20027187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003285	chr11	-	282	2	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	32698	13247	32698	-13247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACATTGATACCAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	20030174	20027203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20027334_20030022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003286	chr11	-	289	2	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	32072	16066	32072	-16066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATCCTATGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	20030800	20030022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20030173_20030661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003287	chr11	-	212	2	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	21503	16705	21503	-16705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTGAGAGGAAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	20041369	20030661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20030799_20041294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003288	chr11	-	213	2	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	18505	27336	18505	-27336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAGTAAGCTTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	20044367	20041292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20041368_20044229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003289	chr11	-	179	2	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	14119	30327	14119	-30327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTACAGAACCTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	20048753	20044283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20044446_20048736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003290	chr11	-	222	2	ISM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	11979	32032	11938	-30379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACACATTTGGACCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	20050934	20044335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20044446_20050822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003291	chr11	+	1334	5	FSM	ENSMUSG00000020149.18	ENST00000409751.1	1335	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	20151436	20175464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_20151653_20165629_20165703_20173083_20173180_20174366_20174499_20174647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003292	chr11	+	1853	1	Genic_Genomic	ENSMUSG00000020149.18	novel	NA	NA	NA	NA	23404	2	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCTTGTTGGGTCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	20175005	20176858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_20175000_20176900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003293	chr11	-	368	2	ISM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	10058	0	10058	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	20189360	20188385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20188589_20189195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003294	chr11	-	344	2	ISM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	35	3586	35	-3585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAGGTCTAAGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	20199383	20191971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20192239_20199306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003295	chr11	-	504	1	Genic_Genomic	ENSMUSG00000020142.13	novel	NA	NA	NA	NA	17553	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTCTTTGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	20252682	20252178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_20252200_20252700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003296	chr11	-	946	5	ISM	ENSMUSG00000020142.13	ENST00000531327.5	989	6	1512	0	1512	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCTCCTGAGCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	20268723	20254115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20254501_20256465_20256601_20257891_20258087_20263915_20264083_20268659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003297	chr11	-	714	3	NNC	ENSMUSG00000020142.13	novel	989	6	NA	NA	12148	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCCTCCTGAGCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	20258087	20254115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_20254501_20256467_20256601_20257891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003298	chr11	-	1281	1	FSM	ENSMUSG00000078965.6	ENSMUST00000180654.2	1002	1	-72	-207	-72	207	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGCACTAGAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	20286085	20284804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_20284800_20286100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003299	chr11	+	4002	1	ISM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	105686	0	17041	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCACAGTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20599019	20603021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_20599000_20603000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003300	chr11	-	1478	5	ISM	ENSMUSG00000049659.16	ENST00000409933.5	2791	9	884	17675	884	-17675	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATCTGATCCATTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	20676723	20653730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20653834_20658680_20658738_20659619_20659743_20662159_20662316_20675684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003301	chr11	-	1021	3	ISM	ENSMUSG00000049659.16	ENSMUST00000146722.9	3763	9	1181	24536	1181	-23564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTGTTAGAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20676426	20659619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20659747_20662163_20662316_20675684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003302	chr11	-	1030	2	NNC	ENSMUSG00000049659.16	novel	3082	8	NA	NA	1002	-26147	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCGCCAGCAAAAACAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20676605	20662202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_20662312_20675684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003303	chr11	-	1468	1	ISM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	6011	2	5303	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGCTTCTGGGTTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	20775045	20773577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_20773600_20775000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003304	chr11	+	661	2	ISM	ENSMUSG00000020134.14	ENSMUST00000101477.2	3703	6	11818	1866	11818	-1866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACATCAGTTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	21097286	21098457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_21097447_21097956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003305	chr11	+	588	1	ISM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	58445	0	14267	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCGAATTTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21099735	21100323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_21099700_21100300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003306	chr11	+	726	2	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	48006	0	48006	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAATTCAGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21266788	21270380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_21266887_21269752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003307	chr11	-	606	1	Genic_Genomic	ENSMUSG00000001891.17	novel	NA	NA	NA	NA	32667	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAAGTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21271742	21271136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_21271100_21271700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003308	chr11	-	784	3	ISM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	41431	489	25363	46	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTCTTGCTCCAACATAA	NA	NA	NA	NA	NA	NA	NA	NA	21279046	21271626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21272130_21273198_21273304_21278870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003309	chr11	-	495	3	ISM	ENSMUSG00000001891.17	ENST00000613823.2	1715	9	25463	-2	25463	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCTCAGAATCGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	21278946	21271780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21272095_21273198_21273304_21278870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003310	chr11	-	317	1	ISM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	48379	644	32311	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACCTCAGAATCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21272098	21271781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21271800_21272100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003311	chr11	-	464	3	ISM	ENSMUSG00000001891.17	ENST00000613823.2	1715	9	24485	1500	24485	-1500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAGTATACCCGATAT	NA	NA	NA	NA	NA	NA	NA	NA	21279924	21273282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21273304_21278870_21279114_21279724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003312	chr11	-	839	4	ISM	ENSMUSG00000001891.17	ENST00000613823.2	1715	9	21860	7122	21860	-7122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTGGTTAAATTAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	21282549	21278904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21279114_21279724_21279923_21280833_21281132_21282415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003313	chr11	-	605	3	NNC	ENSMUSG00000001891.17	novel	1715	9	NA	NA	23290	-7214	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATCAGATCTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21281119	21278996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_21279114_21279720_21279923_21280833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003314	chr11	-	704	4	ISM	ENSMUSG00000001891.17	ENST00000613823.2	1715	9	950	9076	950	-9076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAACACGAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	21303459	21280858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21281132_21282415_21282550_21283624_21283811_21303348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003315	chr11	-	437	4	ISM	ENSMUSG00000001891.17	ENST00000613823.2	1715	9	63	10692	63	-10692	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTCCAGAAGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	21304346	21282474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21282550_21283624_21283811_21303348_21303457_21304278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003316	chr11	-	801	1	Genic_Genomic	ENSMUSG00000020321.17	novel	NA	NA	NA	NA	14334	5	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGCCTATACCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	21507487	21506686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_21506700_21507500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003317	chr11	-	1328	6	ISM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	7821	126	7708	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTCAGTGCAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	21514113	21506817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003318	chr11	-	934	5	ISM	ENSMUSG00000020321.17	ENSMUST00000102874.11	2122	9	25	6078	25	-5522	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAAATGGCTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	21522168	21512864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003319	chr11	+	1052	4	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	37347	12565	37347	-12565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAAGTAGCCTGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	21639568	21662073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_21639683_21641769_21641904_21645113_21645306_21661461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003320	chr11	+	994	3	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	42890	3346	42890	-3346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACCTGAGTATATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21645111	21671292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_21645306_21661461_21662072_21671102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003321	chr11	+	852	3	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	59313	0	59313	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGACGCCTCTGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	21661534	21674638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_21662072_21671102_21671292_21674512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003322	chr11	-	1630	1	ISM	ENSMUSG00000005917.16	ENSMUST00000006071.14	2789	5	5222	0	5222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGCTCTTCTAATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	21946393	21944763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_21944800_21946400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003323	chr11	+	1568	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTATCTGTGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	22462087	22469234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003324	chr11	+	1068	2	ISM	ENSMUSG00000085803.2	ENSMUST00000148364.2	1257	3	1559	28	1559	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTTACAAATAAAATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	22685596	22687909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22685684_22686928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003325	chr11	+	1011	1	NIC	ENSMUSG00000085803.2	novel	1257	3	NA	NA	2889	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTTTAGAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	22686926	22687937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_22686900_22687900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003326	chr11	-	322	1	ISM	ENSMUSG00000098650.2	ENSMUST00000160826.2	2746	3	147022	3	147022	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGTATAATAAGTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	22785068	22784746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_22784700_22785100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003327	chr11	-	449	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	371	2237	371	-2119	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTACAATCCCATCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	22809730	22786983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_22787196_22809493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003328	chr11	-	2278	1	Genic_Genomic	ENSMUSG00000051355.19	novel	NA	NA	NA	NA	80587	4	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCCAGTGTGTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	22848409	22846131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_22846100_22848400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003329	chr11	-	2792	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	14	1702	14	-1702	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTACTGTTTTGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	22932368	22847837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_22850058_22906410_22906693_22932078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003330	chr11	+	752	5	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	1	7327	1	-6698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTGAGACTACCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	22940519	22946453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003331	chr11	+	520	5	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	2746	6625	2615	-5996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGTCTCTGATTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	22943264	22947155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003332	chr11	+	598	5	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	3778	6045	3647	-5416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAATCCAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	22944296	22947735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003333	chr11	+	599	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	5329	3978	5329	-3978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTATTTACTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	22945978	22949173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003334	chr11	+	557	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	5743	2197	5743	-2197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATTAATGTGTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	22946392	22950954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003335	chr11	+	612	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	6374	1679	6374	-1679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAATATATTGTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	22947023	22951472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003336	chr11	+	597	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	6968	1461	6968	-1461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGCATCATATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	22947617	22951690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003337	chr11	+	696	5	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	8403	748	8403	-748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTCTTGGTGCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	22949052	22952403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003338	chr11	+	597	4	ISM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	10709	218	10709	-218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGAATAGAGTTAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	22951358	22952933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22951473_22951559_22951691_22952166_22952402_22952816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003339	chr11	+	505	4	NNC	ENSMUSG00000007739.11	novel	1634	13	NA	NA	10777	-235	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGATGATGTGGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	22951426	22952916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_22951473_22951566_22951691_22952166_22952402_22952816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003340	chr11	+	987	4	ISM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	11032	146	10901	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAACCGTCCCCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	22951550	22953634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_22951691_22952166_22952402_22952816_22952931_22953136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003341	chr11	+	666	3	NNC	ENSMUSG00000007739.11	novel	1634	13	NA	NA	11596	-245	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGATCTGTGTACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	22952245	22953535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_22952402_22952816_22952928_22953136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003342	chr11	+	535	1	Genic_Genomic	ENSMUSG00000007739.11	novel	NA	NA	NA	NA	12597	1	mono-exon	FALSE	NA	NA	NA	NA	NA	393	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCAGATGTTAGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	22953246	22953781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_22953200_22953800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003343	chr11	+	290	2	ISM	ENSMUSG00000020290.15	ENSMUST00000102870.8	3471	26	475	34297	31	-34297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCTTATACCATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	23206529	23211936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23206718_23211834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003344	chr11	+	308	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	2	25847	2	-25028	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAAGCACCTTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	23211833	23221205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23211967_23217661_23217764_23221132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003345	chr11	+	160	2	ISM	ENSMUSG00000020290.15	ENST00000676999.1	4107	24	21223	18126	16854	-17307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCAGTACACTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	23228685	23228926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23228725_23228805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003346	chr11	+	410	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	16973	15587	16973	-14768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTGGTTTTTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	23228804	23231465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23228926_23230373_23230503_23231305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003347	chr11	+	437	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	18573	14344	18573	-13525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCGTGTTATCAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	23230404	23232708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23230503_23231305_23231465_23232528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003348	chr11	+	451	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	19516	12675	19516	-11856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGTAAGTAAAGACAATAA	NA	NA	NA	NA	NA	NA	NA	NA	23231347	23234377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23231465_23232528_23232727_23234241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003349	chr11	+	366	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	20851	12322	20851	-11503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTGCCAGTAGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	23232682	23234730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23232727_23234241_23234381_23234547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003350	chr11	+	512	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	22713	11827	22713	-11008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTACTATGCTTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	23234544	23235225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23234730_23234811_23234969_23235055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003351	chr11	+	314	2	ISM	ENSMUSG00000020290.15	ENST00000677850.1	3152	17	28561	886	23228	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATGCTAGGCTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	23235059	23246114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23235220_23245960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003352	chr11	+	343	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	23309	10179	23309	-9360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGTATATAAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	23235140	23236873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23235220_23235800_23235936_23236744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003353	chr11	+	186	2	ISM	ENSMUSG00000020290.15	ENST00000676999.1	4107	24	27678	10201	23309	-9382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGAATTTATTTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	23235140	23236851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23235220_23236744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003354	chr11	+	349	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	24049	9598	24049	-8779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTTGTTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23235880	23237454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23235936_23236744_23236929_23237344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003355	chr11	+	344	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	25001	7154	25001	-6335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTCAAATATTCGATGC	NA	NA	NA	NA	NA	NA	NA	NA	23236832	23239898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23236929_23237344_23237452_23239757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003356	chr11	+	386	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	25599	5420	25599	-4601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATACATTTAAGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	23237430	23241632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23237452_23239757_23239953_23241462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003357	chr11	+	343	3	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	29744	2912	29744	-2093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAAGAGTAAGTTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	23241575	23244140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23241632_23243771_23243907_23243988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003358	chr11	+	189	2	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	32226	2359	32226	-1540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATATTTCTTTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	23244057	23244693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23244149_23244595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003359	chr11	+	194	2	ISM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	32798	961	32798	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGTGTGATTAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	23244629	23246091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23244693_23245960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003360	chr11	+	340	1	ISM	ENSMUSG00000020290.15	ENSMUST00000020538.13	5145	26	40673	544	34882	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGATTTTAAGGATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	23246713	23247053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23246700_23247100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003361	chr11	-	279	1	Genic_Genomic	ENSMUSG00000020288.14	novel	NA	NA	NA	NA	9698	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTTTTATTTCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	23438156	23437877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_23437900_23438200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003362	chr11	-	986	1	ISM	ENSMUSG00000020288.14	ENSMUST00000109539.8	3583	9	8399	664	8323	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCACTGAAATCCTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	23439531	23438545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_23438500_23439500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003363	chr11	-	1183	4	ISM	ENSMUSG00000020288.14	ENST00000489653.6	1006	9	6298	-774	6298	774	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCCGTATACAAGTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	23441556	23439623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003364	chr11	-	135	2	ISM	ENSMUSG00000042208.16	ENSMUST00000093267.11	3646	19	46087	7721	46087	-7721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGAGTCAAGGCAAAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	23532940	23531623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_23531685_23532866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003365	chr11	-	137	2	ISM	ENSMUSG00000042208.16	ENSMUST00000093267.11	3646	19	17186	35180	17186	-35180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAATTAAAATCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	23561841	23559082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_23559125_23561746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003366	chr11	-	145	2	ISM	ENSMUSG00000042208.16	ENSMUST00000093267.11	3646	19	16994	37882	16994	-37882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGACCGACATGGAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	23562033	23561784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_23561858_23561961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003367	chr11	-	140	2	ISM	ENSMUSG00000042208.16	ENSMUST00000093267.11	3646	19	11826	41278	11826	-41278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAACCTTCTTACACGC	NA	NA	NA	NA	NA	NA	NA	NA	23567201	23565180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_23565257_23567137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003368	chr11	-	133	2	ISM	ENSMUSG00000042208.16	ENSMUST00000043356.13	4392	20	4013	49225	4013	-48573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCGTAATGCTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	23575014	23572475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_23572530_23574935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003369	chr11	-	1049	1	Genic_Genomic	ENSMUSG00000020283.6	novel	NA	NA	NA	NA	18435	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGCCTGAATGCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	23597524	23596475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_23596500_23597500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003370	chr11	-	1642	3	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	10015	2105	10015	-2105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCCTCCAACTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	23605944	23598583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_23599591_23600929_23601056_23605435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003371	chr11	+	463	3	ISM	ENSMUSG00000020280.13	ENST00000407787.5	1747	17	0	58193	0	-58193	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCATTTGCCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	23617287	23623324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23617415_23622507_23622757_23623237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003372	chr11	+	561	4	ISM	ENSMUSG00000020280.13	ENST00000407787.5	1747	17	52814	-1	52814	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGCATATTTTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	23670101	23681518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_23670222_23675431_23675575_23678974_23679075_23681320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003373	chr11	+	738	3	FSM	ENSMUSG00000000861.16	ENST00000643004.1	741	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTTGGGCAGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	24028208	24059147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_24028446_24035320_24035651_24058976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003374	chr11	+	336	3	FSM	ENSMUSG00000033015.17	ENST00000443306.1	421	3	38	47	38	-45	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGCAGCTGTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	25307508	25317092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_25307653_25315542_25315595_25316952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003375	chr11	-	249	2	Antisense	novelGene_ENSMUSG00000033015.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCAGGGAGATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	25317141	25315540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_25315599_25316950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003376	chr11	-	245	2	Antisense	novelGene_ENSMUSG00000033015.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACCCAGGGAGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25317141	25315541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_25315596_25316950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003377	chr11	+	192	1	Genic_Genomic	ENSMUSG00000033015.17	novel	NA	NA	NA	NA	9480	3	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTTTGAATGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25316950	25317142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_25317000_25317100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003378	chr11	-	453	1	Genic_Genomic	ENSMUSG00000064090.15	novel	NA	NA	NA	NA	120015	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTAATTTACTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	26421710	26421257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_26421300_26421700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003379	chr11	-	663	3	ISM	ENSMUSG00000064090.15	ENSMUST00000109504.8	1642	12	108442	79	108438	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTTTAAGCATTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	26433287	26421400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_26421787_26426553_26426701_26433157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003380	chr11	-	477	3	ISM	ENSMUSG00000064090.15	ENST00000340157.9	1688	12	108548	205	108548	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTATTTTCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	26433177	26421463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_26421787_26426566_26426701_26433157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003381	chr11	+	401	1	Genic_Genomic	ENSMUSG00000004018.10	novel	NA	NA	NA	NA	84276	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAGTCATTAACACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	26421477	26421878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_26421500_26421900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003382	chr11	+	305	2	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	5315	22860	5315	-22860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCCTGTGCAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	29088154	29088607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29088270_29088417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003383	chr11	+	265	1	Genic_Genomic	ENSMUSG00000020464.16	novel	NA	NA	NA	NA	28726	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTGCCTACTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	29111565	29111830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_29111600_29111800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003384	chr11	+	1008	2	ISM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	40776	1465	40776	-1465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGCTGCTGGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	29163665	29169332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29163797_29168455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003385	chr11	+	950	1	ISM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	46958	0	46958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	NA	NA	NA	NA	NA	NA	NA	29169847	29170797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29169800_29170800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003386	chr11	-	352	2	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	24826	252	24826	-252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAACTGTGAACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	29172583	29171783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_29171986_29172433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003387	chr11	-	293	2	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	24524	901	24524	-901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTAGTTTTGGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	29172885	29172432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_29172584_29172743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003388	chr11	-	265	2	NNC	ENSMUSG00000020462.15	novel	1664	10	NA	NA	24524	-923	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTACCAGGGAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	29172885	29172454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_29172574_29172739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003389	chr11	-	275	3	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	17470	1212	17470	-1212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGAAAGCTAATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	29179939	29172743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_29172884_29175856_29175960_29179907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003390	chr11	-	285	3	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	3248	9075	3248	-9075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAAGAGAGGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	29194161	29180606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_29180674_29184357_29184473_29194058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003391	chr11	-	278	2	ISM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	184	23552	184	-23552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTTCCCCCTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	29197225	29195083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_29195151_29197014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003392	chr11	+	491	2	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	87425	41271	87425	40123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTAGAAAAAGAGAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	29411772	29413534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29411849_29413119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003393	chr11	+	970	2	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	88974	39094	88974	-39094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGATGAGCAGAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	29413321	29415711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29414191_29415610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003394	chr11	+	449	3	ISM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	115245	10706	115245	-10706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTAAACAGATTATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	29439592	29444099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29439728_29443699_29443793_29443878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003395	chr11	+	482	3	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	120037	12231	119347	-6228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCCGATCCAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	29443694	29448577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29443793_29443878_29444094_29448408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003396	chr11	+	652	3	NNC	ENSMUSG00000032740.18	novel	6051	31	NA	NA	126684	-593	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGAGCATCCATGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	29451031	29454212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_29451057_29453385_29453652_29453851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003397	chr11	+	3210	3	ISM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	129867	470	129500	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAATATGAATAGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	29453847	29460341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29454312_29457124_29457224_29457694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003398	chr11	+	2660	1	Genic_Genomic	ENSMUSG00000032740.18	novel	NA	NA	NA	NA	133806	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTACAGTCATTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	29458153	29460813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_29458200_29460800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003399	chr11	-	920	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTCTTTAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	29465034	29462874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_29463677_29464916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003400	chr11	-	805	1	NIC	ENSMUSG00000032673.6	novel	2126	3	NA	NA	1352	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTCTTTAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	29463679	29462874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_29462900_29463700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003401	chr11	-	641	5	NNC	ENSMUSG00000020460.16	novel	637	5	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	29497860	29495845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_29496030_29496290_29496423_29496702_29496789_29497201_29497261_29497680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003402	chr11	-	777	6	NNC	ENSMUSG00000020460.16	novel	791	6	NA	NA	1	-17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGGAACTCGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	29498108	29495862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_29496030_29496290_29496423_29496702_29496789_29497201_29497261_29497680_29497746_29497840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003403	chr11	+	993	2	ISM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	23128	0	23128	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	29691690	29692916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_29691754_29691986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003404	chr11	-	419	3	ISM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	76640	13840	76640	-13840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAAGGCGCAGCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	30071617	30070624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_30070812_30070975_30071066_30071475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003405	chr11	-	278	1	ISM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	143319	0	143319	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTACTGTTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	30456268	30455990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_30456000_30456300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003406	chr11	-	313	2	ISM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	17269	247	17269	-247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTCTTCTGGAATTATA	NA	NA	NA	NA	NA	NA	NA	NA	30582318	30456237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_30456440_30582207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003407	chr11	+	1083	2	FSM	ENSMUSG00000043999.7	ENST00000394705.3	1864	2	1	780	1	-780	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGTCAAACTCATGGATA	NA	NA	NA	NA	NA	NA	NA	NA	30835414	30841939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_30835547_30840988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003408	chr11	+	981	1	ISM	ENSMUSG00000043999.7	ENSMUST00000109430.2	2926	2	6383	1008	6327	2	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGCGAGTCTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	30841740	30842721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_30841700_30842700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003409	chr11	-	233	1	ISM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	22975	171	22972	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTCAGTTACTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	30881177	30880944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_30880900_30881200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003410	chr11	-	503	1	ISM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	9141	0	9125	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAGTGTCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30927209	30926706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_30926700_30927200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003411	chr11	-	986	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	40	-8	40	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTTTTCTTTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	30936294	30926943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_30927747_30936111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003412	chr11	+	1789	3	ISM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	127036	202	127012	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAATTCTGATAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31031430	31052502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_31031623_31035000_31035132_31051036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003413	chr11	+	1521	1	Genic_Genomic	ENSMUSG00000020305.14	novel	NA	NA	NA	NA	146766	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTATTATTGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	31051184	31052705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_31051200_31052700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003414	chr11	-	689	1	NIC	ENSMUSG00000044502.17	novel	1394	4	NA	NA	5858	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGACGATCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	31615869	31615180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_31615200_31615900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003415	chr11	-	1267	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	97	30	-61	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAATAAATAGTGGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	31621788	31615210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003416	chr11	+	385	2	ISM	ENSMUSG00000020300.15	ENSMUST00000020543.13	2312	10	905	41632	890	-41632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAATAGAACTATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	31823115	31839945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_31823413_31839857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003417	chr11	+	257	2	ISM	ENSMUSG00000020300.15	ENST00000520867.5	2599	8	17955	11048	-4	-10995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTCAGAAAGGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	31839856	31870582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_31839940_31870408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003418	chr11	+	1275	6	ISM	ENSMUSG00000020300.15	ENST00000522336.5	1405	8	30550	-2	30550	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTGAGATAATCACCA	NA	NA	NA	NA	NA	NA	NA	NA	31870410	31881901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003419	chr11	+	327	1	NIC	ENSMUSG00000020300.15	novel	2599	8	NA	NA	41443	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGCAGTGTGTAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	31881303	31881630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_31881300_31881600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003420	chr11	+	828	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	-2	-5	-2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAAAGCCATAGTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	32155412	32158989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003421	chr11	-	553	1	ISM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	12163	0	4298	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	32160137	32159584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_32159600_32160100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003422	chr11	-	670	2	ISM	ENSMUSG00000020282.19	ENST00000427504.1	1943	14	3914	-129	3914	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCCCATGATAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	32160521	32159677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_32160224_32160397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003423	chr11	-	569	4	ISM	ENSMUSG00000020282.19	ENST00000427504.1	1943	14	-136	3602	-136	-3602	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTATCGCTGTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	32164571	32163408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_32163518_32163951_32164110_32164181_32164305_32164392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003424	chr11	+	1740	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	32176507	32182700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003425	chr11	+	1741	4	NNC	ENSMUSG00000020287.16	novel	1737	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	32176510	32182700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_32176718_32177751_32177950_32179848_32180058_32181573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003426	chr11	-	1355	2	ISM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	33603	0	33443	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTTGCTGAGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	32184104	32181962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_32183117_32183903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003427	chr11	+	330	2	ISM	ENSMUSG00000069917.8	ENSMUST00000093207.4	554	3	348	-2	348	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGCATGCCTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	32246836	32247300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_32246946_32247079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003428	chr11	+	1013	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTACAATTTCTAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	32405369	32466688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_32405547_32449224_32449462_32466089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003429	chr11	-	350	1	NIC	ENSMUSG00000044056.4	novel	754	4	NA	NA	3890	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGGAGGTAGTGATAACA	NA	NA	NA	NA	NA	NA	NA	NA	32473689	32473339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_32473300_32473700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003430	chr11	+	1897	2	ISM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	99897	167	99746	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTACAGTAGTAATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	32692620	32696402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_32692645_32694529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003431	chr11	+	1865	1	ISM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	102059	0	102050	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGTCACATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32694924	32696789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_32694900_32696800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003432	chr11	-	575	1	Genic_Genomic	ENSMUSG00000057113.14	novel	NA	NA	NA	NA	10222	11	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAGTGTCTTTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	33102850	33102275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_33102300_33102800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003433	chr11	-	933	6	ISM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	3232	-7	3098	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGGATAGTGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33109974	33102279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003434	chr11	-	302	1	Genic_Genomic	ENSMUSG00000057113.14	novel	NA	NA	NA	NA	7850	6	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTGACAATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	33105222	33104920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_33104900_33105200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003435	chr11	-	520	4	ISM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	6049	-2	6044	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGATGTATGTGACAATA	NA	NA	NA	NA	NA	NA	NA	NA	33107028	33104924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003436	chr11	-	338	3	NNC	ENSMUSG00000057113.14	novel	1157	10	NA	NA	6349	-107	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGCAGAAAACTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	33106723	33105033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_33105221_33106013_33106105_33106663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003437	chr11	-	106	1	Genic_Genomic	ENSMUSG00000057113.14	novel	NA	NA	NA	NA	7641	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGGTGTCACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	33105431	33105325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_33105300_33105400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003438	chr11	-	748	6	ISM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	-130	4606	0	-4606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATAAGTACTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	33113206	33109933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003439	chr11	+	332	1	FSM	ENSMUSG00000099902.2	ENSMUST00000119969.2	447	1	112	3	112	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAACGGATGATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	33123030	33123362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_33123000_33123400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003440	chr11	-	967	6	ISM	ENSMUSG00000020159.9	ENST00000519385.5	1085	7	4358	-2	4358	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGAACTCTTGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	33518135	33502536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_33502843_33504967_33505121_33506929_33507068_33513865_33513949_33517212_33517431_33518066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003441	chr11	-	598	1	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	12863	0	12863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	40570738	40570140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_40570100_40570700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003442	chr11	+	989	2	Antisense	novelGene_ENSMUSG00000042032.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACAACAATTACAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40570140	40571597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_+_40571017_40571484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003443	chr11	-	1285	4	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	7997	0	7997	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	40575604	40570140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003444	chr11	-	579	4	ISM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	7430	1342	7430	-1342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTCGACAACCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	40576171	40571482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_40571597_40573290_40573485_40575508_40575662_40576053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003445	chr11	-	555	2	ISM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	38	8290	38	-8290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTATGGGCTTGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	40585992	40578430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_40578623_40585629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003446	chr11	-	1615	2	ISM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	29490	0	29434	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	40594759	40592221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_40593686_40594608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003447	chr11	-	1466	1	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	30506	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	40593687	40592221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_40592200_40593700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003448	chr11	+	1567	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	12	-2	12	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTTTTCTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	40624505	40630875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003449	chr11	+	893	1	Genic_Genomic	ENSMUSG00000020328.11	novel	NA	NA	NA	NA	5210	2	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTTTTCTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	40629982	40630875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_40630000_40630900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003450	chr11	-	3514	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTTTGGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	40646139	40639377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003451	chr11	-	2099	6	NNC	ENSMUSG00000020326.8	novel	2112	6	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACCTTCCTTGTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	40644890	40639382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_40640613_40641699_40641887_40642087_40642187_40642266_40642346_40642930_40643179_40644634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003452	chr11	-	2112	6	FSM	ENSMUSG00000020326.8	ENST00000393929.5	2112	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACCTTCCTTGTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	40644897	40639382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_40640613_40641699_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003453	chr11	-	181	1	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	3009	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATTTGTTAGTTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	40641888	40641707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_40641700_40641900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003454	chr11	-	471	3	ISM	ENSMUSG00000020326.8	ENST00000512163.5	749	5	1	558	1	-558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATATTTTATATGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	40645964	40642265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_40642346_40642930_40643185_40645827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003455	chr11	-	330	2	NNC	ENSMUSG00000020326.8	novel	749	5	NA	NA	1711	-561	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACATATTTTATATGAT	NA	NA	NA	NA	NA	NA	NA	NA	40643186	40642268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_40642343_40642930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003456	chr11	+	831	1	FSM	ENSMUSG00000058809.9	ENSMUST00000119713.2	1722	1	1356	-465	1356	465	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTTCACTAACTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	41390919	41391750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_41390900_41391800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003457	chr11	-	2280	1	ISM	ENSMUSG00000020436.18	ENSMUST00000070725.11	4041	9	88360	15	87833	12	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCATTCTAATCTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	41803324	41801044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_41801000_41803300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003458	chr11	-	2785	4	ISM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	32674	153	32674	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATTAAAGCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	41858483	41801209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_41803513_41807110_41807317_41811224_41811378_41858360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003459	chr11	-	2855	1	Genic_Genomic	ENSMUSG00000010803.14	novel	NA	NA	NA	NA	46490	3	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATCCACAGGTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	42024596	42021741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_42021700_42024600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003460	chr11	-	3321	4	ISM	ENSMUSG00000010803.14	ENSMUST00000205546.2	4045	10	34930	31	33026	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAAGCTTACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	42038060	42021796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003461	chr11	+	390	4	ISM	ENSMUSG00000007653.13	ENST00000517547.5	1348	7	39	35069	-15	-34887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAGAAGATTTAAGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	42312161	42482831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_42312254_42313407_42313476_42420238_42420322_42482684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003462	chr11	+	445	4	ISM	ENSMUSG00000007653.13	ENST00000517547.5	1348	7	1283	33123	1229	-32941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATTTGTAAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	42313405	42484777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_42313476_42420238_42420322_42482684_42482823_42484623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003463	chr11	+	1100	4	ISM	ENSMUSG00000007653.13	ENST00000517547.5	1348	7	170562	-34	170508	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTACACATGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	42482684	42517934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_42482823_42484623_42484777_42488367_42488613_42517370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003464	chr11	+	453	3	NNC	ENSMUSG00000007653.13	novel	1348	7	NA	NA	170518	-29183	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAGCGCCAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	42482694	42488535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_42482827_42484623_42484777_42488367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003465	chr11	+	385	1	ISM	ENSMUSG00000007653.13	ENSMUST00000007797.10	3989	10	206936	1951	205343	4	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGCGGTTTTCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	42517519	42517904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_42517500_42517900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003466	chr11	-	746	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGATTGGTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	43317078	43311071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003467	chr11	-	141	1	NIC	ENSMUSG00000020415.17	novel	741	6	NA	NA	5270	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGATTGTGAATACTTA	NA	NA	NA	NA	NA	NA	NA	NA	43311236	43311095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_43311100_43311200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003468	chr11	-	698	5	FSM	ENSMUSG00000020415.17	ENST00000393964.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATATGTTCAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	43316540	43311104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003469	chr11	+	837	2	ISM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	8024	1239	8024	-1239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATGTACATGCCGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	43336193	43337569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_43336300_43336838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003470	chr11	+	1581	1	Genic_Genomic	ENSMUSG00000020409.11	novel	NA	NA	NA	NA	9059	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGAGTTGTTTGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	43337228	43338809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_43337200_43338800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003471	chr11	+	1395	6	FSM	ENSMUSG00000044707.8	ENST00000644313.1	1395	6	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACCACAGGGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	43419246	43476548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_43419430_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003472	chr11	+	1508	3	FSM	ENSMUSG00000044950.8	ENST00000429776.2	1854	3	10	336	10	-336	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTCAAAAAATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	43573313	43596669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_43573444_43577183_43577253_43595360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003473	chr11	+	1393	1	ISM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	22788	1013	20641	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGACACAATTTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	43595612	43597005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_43595600_43597000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003474	chr11	-	1018	6	ISM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	6158	-1	-1993	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGGGGACTATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	43632651	43620834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003475	chr11	-	438	1	ISM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	17529	7	9378	5	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGACAGTTGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	43621280	43620842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_43620800_43621300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003476	chr11	-	534	4	FSM	ENSMUSG00000041278.11	ENST00000684018.1	794	4	18	242	18	-242	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCGTGTCCCTGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	43630640	43621089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_43621435_43627245_43627301_43629623_43629661_43630543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003477	chr11	-	1532	2	FSM	ENSMUSG00000050541.15	ENSMUST00000167574.2	3047	2	354	1161	354	-1161	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAGTCCTGAGTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	43726805	43666593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_43667287_43725966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003478	chr11	+	329	3	ISM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	10	15322	10	-6077	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGATTTTTACAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	44422111	44439727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44422212_44433455_44433548_44439590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003479	chr11	+	283	2	ISM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	17575	12446	17575	-3201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCATCCCGGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	44439676	44442603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44439827_44442470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003480	chr11	+	288	2	ISM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	20399	8943	20399	302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGTTCACTTACAATC	NA	NA	NA	NA	NA	NA	NA	NA	44442500	44446106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44442647_44445964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003481	chr11	+	302	2	ISM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	23861	6808	23861	2437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACTGGGAGCATCGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	44445962	44448241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44446106_44448082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003482	chr11	+	267	2	ISM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	26047	4101	26047	-4101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTCACAGTGACGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	44448148	44450948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44448266_44450798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003483	chr11	+	276	2	ISM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	28697	2630	28697	-2630	internal_fragment	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTGGTGGCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	44450798	44452419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44450947_44452291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003484	chr11	-	303	2	Antisense	novelGene_ENSMUSG00000019189.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGCCCATCACAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	44454860	44452485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_44452654_44454725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003485	chr11	+	173	1	ISM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	45087	1297	32776	1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGCTGGAGAGGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44454877	44455050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44454900_44455000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003486	chr11	+	381	3	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	14720	80607	14720	-80420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGTGCCTGCAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	44774635	44815402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44774759_44798733_44798865_44815275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003487	chr11	+	360	4	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	38869	14603	38869	-14416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGTGTTCTAGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44798784	44881406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44798865_44815275_44815403_44863690_44863780_44881342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003488	chr11	+	421	4	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	55358	13633	55358	-13446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGAATGTCTCGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	44815273	44882376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44815403_44863690_44863780_44881342_44881409_44882239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003489	chr11	+	557	3	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	122321	8981	122321	-8794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCCCAGAGATCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44882236	44887028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44882418_44883135_44883316_44886832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003490	chr11	+	712	3	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	123226	123	123226	64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTTTATAAACCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	44883141	44895886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44883316_44886832_44887028_44895543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003491	chr11	+	414	1	ISM	ENSMUSG00000057098.15	ENSMUST00000101326.10	3422	16	387505	294	135733	53	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGTATGGACAGAATAGG	NA	NA	NA	NA	NA	NA	NA	NA	44895648	44896062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_44895600_44896100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003492	chr11	-	966	1	ISM	ENSMUSG00000011254.17	ENSMUST00000109254.2	2202	7	7380	0	7380	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTCCTACAGAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45838635	45837669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_45837700_45838600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003493	chr11	-	1087	3	ISM	ENSMUSG00000011254.17	ENSMUST00000109254.2	2202	7	3579	574	3579	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45842436	45838243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_45839156_45841022_45841131_45842369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003494	chr11	+	2596	4	FSM	ENSMUSG00000040489.6	ENST00000311371.9	2614	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTGTTAAATGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	45871045	45908822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_45872201_45874145_45874386_45875543_45875724_45907801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003495	chr11	+	1201	1	Genic_Genomic	ENSMUSG00000011256.17	novel	NA	NA	NA	NA	90153	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTTTGGATGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46036971	46038172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_46037000_46038200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003496	chr11	+	1848	3	FSM	ENSMUSG00000020401.7	ENST00000302938.4	1844	3	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCCCAGAGACCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	46295566	46298714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_46296254_46297321_46297454_46297685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003497	chr11	+	1813	3	NNC	ENSMUSG00000020401.7	novel	1844	3	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCAGCCCCAGAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	46295594	46298710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_46296254_46297321_46297454_46297688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003498	chr11	+	1773	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	66	708	66	486	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCACAAAGCTACCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	46327866	46332840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_46328019_46330632_46330803_46331389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003499	chr11	+	1754	2	FSM	ENSMUSG00000020397.16	ENSMUST00000170928.8	2390	2	119	517	106	-517	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTCCAGTTTTCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	46327906	46333031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_46328019_46331389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003500	chr11	+	2160	1	NIC	ENSMUSG00000020397.16	novel	2390	2	NA	NA	3588	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCAGGAATTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	46331388	46333548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_46331400_46333500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003501	chr11	+	684	1	FSM	ENSMUSG00000080776.2	ENSMUST00000119853.2	813	1	117	12	117	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATGAACTAAGGTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	46618761	46619445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_46618800_46619400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003502	chr11	-	1357	1	ISM	ENSMUSG00000020354.16	ENST00000435422.7	3173	9	401031	0	400843	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCAGTTGCTTATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	46869506	46868149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_46868100_46869500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003503	chr11	-	1959	2	ISM	ENSMUSG00000020354.16	ENST00000435422.7	3173	9	400272	63	400084	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTGCTATTTTCGATA	NA	NA	NA	NA	NA	NA	NA	NA	46870265	46868212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_46869533_46869626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003504	chr11	+	1452	8	NIC	ENSMUSG00000020372.16	novel	1447	8	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCCACCTTTCCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48691186	48697262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_48691400_48692489_48692666_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003505	chr11	+	366	3	FSM	ENSMUSG00000020372.16	ENST00000504726.1	362	3	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTTCTGAAACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	48691214	48696901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_48691400_48696396_48696483_48696806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003506	chr11	+	527	4	ISM	ENSMUSG00000020372.16	ENST00000511900.5	911	7	1269	1777	1269	-1777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGATCTGTTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	48692487	48695124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_48692666_48694230_48694327_48694684_48694796_48694982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003507	chr11	+	451	4	ISM	ENSMUSG00000020372.16	ENST00000511566.5	803	6	1880	0	1880	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTTCTGAAACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	48693098	48696901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_48693248_48694230_48694327_48694684_48694796_48696806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003508	chr11	-	1112	1	ISM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	9838	0	9838	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	48698342	48697230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_48697200_48698300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003509	chr11	+	566	1	Genic_Genomic	ENSMUSG00000040350.17	novel	NA	NA	NA	NA	13158	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGGGGTGTCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	48741449	48742015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_48741400_48742000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003510	chr11	-	488	1	ISM	ENSMUSG00000046879.8	ENSMUST00000049519.4	2259	3	5642	0	5642	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGTATTATCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	48756559	48756071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_48756100_48756600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003511	chr11	-	2085	2	FSM	ENSMUSG00000046879.8	ENSMUST00000097271.4	2082	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCTTTGTATTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	48762249	48756074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_48757831_48761920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003512	chr11	-	703	2	ISM	ENSMUSG00000046879.8	ENSMUST00000049519.4	2259	3	2592	1277	2592	-1273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTGAAGCTGTCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	48759609	48757348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_48757831_48759388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003513	chr11	-	2405	3	ISM	ENSMUSG00000069893.11	ENSMUST00000097494.9	3863	4	-15	19667	2	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGCGTCCTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	48870223	48856643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_48858803_48869865_48870015_48870126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003514	chr11	-	1366	1	ISM	ENSMUSG00000078921.4	ENSMUST00000046745.7	2810	2	5645	0	5645	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAGTTTCCATGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	48949386	48948020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_48948000_48949400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003515	chr11	-	1439	2	FSM	ENSMUSG00000078921.4	ENSMUST00000046745.7	2810	2	28	1343	28	-1343	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATATATATCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	48955003	48949363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_48950589_48954789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003516	chr11	+	1007	2	FSM	ENSMUSG00000046311.14	ENST00000502412.2	3608	2	25	2576	13	-2511	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGTGATGAGTGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	49094337	49106869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_49094366_49105890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003517	chr11	+	1769	2	FSM	ENSMUSG00000046311.14	ENSMUST00000061757.4	3852	2	9	2074	9	-1818	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTACATCTCACTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	49105384	49107562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_49105482_49105890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003518	chr11	+	1729	1	ISM	ENSMUSG00000046311.14	ENSMUST00000109197.8	4029	5	13590	0	2539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGAGTCATTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	49107914	49109643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49107900_49109600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003519	chr11	+	2333	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	944	552	944	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGGAGGAAGGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	49136016	49153302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49136445_49151397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003520	chr11	+	1779	2	ISM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	1049	795	1049	-760	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGGAGTATTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	49142387	49153062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49142502_49151397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003521	chr11	+	2044	1	ISM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	10475	0	10475	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTGTCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	49151813	49153857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49151800_49153900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003522	chr11	-	476	1	FSM	ENSMUSG00000083061.2	ENSMUST00000118307.2	348	1	-33	-95	-33	95	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTTTTATCATAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	49569917	49569441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_49569400_49569900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003523	chr11	+	498	3	ISM	ENSMUSG00000020366.19	ENST00000347470.8	1464	10	10	19807	10	-11258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGCGCTCCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	49737608	49754504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49737803_49745039_49745210_49754370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003524	chr11	+	354	3	ISM	ENSMUSG00000020366.19	ENST00000539014.5	1365	7	12743	2036	12736	-2036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTACAGTTAGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	49757819	49763726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49757869_49759998_49760138_49763560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003525	chr11	+	904	3	ISM	ENSMUSG00000020366.19	ENST00000539014.5	1365	7	18484	0	18477	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCAGGAGGTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	49763560	49765762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49763727_49764870_49764937_49765090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003526	chr11	+	281	2	ISM	ENSMUSG00000020366.19	ENST00000347470.8	1464	10	25971	3659	18486	-3485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGTTCTCTGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	49763569	49770652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49763727_49770528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003527	chr11	+	676	1	NIC	ENSMUSG00000020366.19	novel	4682	12	NA	NA	20005	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAGGAGGTTTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	49765088	49765764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_49765100_49765800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003528	chr11	+	298	2	ISM	ENSMUSG00000020366.19	ENSMUST00000043321.6	1297	11	27871	-62	27871	62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGAAAAACTCCATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	49772954	49774199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49773027_49773973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003529	chr11	+	283	1	ISM	ENSMUSG00000020366.19	ENSMUST00000109179.9	4682	12	36451	2937	28945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAACCACACTGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	49774028	49774311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49774000_49774300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003530	chr11	+	1062	1	ISM	ENSMUSG00000020366.19	ENSMUST00000109179.9	4682	12	38609	0	31103	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTACTTGTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	49776186	49777248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_49776200_49777200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003531	chr11	+	225	2	ISM	ENSMUSG00000036644.16	ENST00000630103.1	300	3	5	9161	5	-9161	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTACCCTGAATCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	50022270	50026763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_50022384_50026651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003532	chr11	+	188	2	ISM	ENSMUSG00000036644.16	ENST00000630103.1	300	3	4381	-1	4381	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTAAAGATGCGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	50026646	50035925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_50026763_50035853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003533	chr11	+	167	2	NNC	ENSMUSG00000036644.16	novel	300	3	NA	NA	4399	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTAAAGATGCGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	50026664	50035925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_50026760_50035853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003534	chr11	+	458	2	ISM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	22768	209	22768	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACTCCTCGAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	50088443	50090733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_50088531_50090362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003535	chr11	-	2246	6	ISM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	3249	-2	3223	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGAGTGAGCCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	50098369	50090190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003536	chr11	-	1589	1	NIC	ENSMUSG00000015837.16	novel	2673	8	NA	NA	9811	0	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTGAGTGAGCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	50091781	50090192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_50090200_50091800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003537	chr11	+	438	1	ISM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	24829	0	24829	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCTTGCTGCTACACTC	NA	NA	NA	NA	NA	NA	NA	NA	50090504	50090942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_50090500_50090900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003538	chr11	-	1231	3	NNC	ENSMUSG00000015837.16	novel	2037	8	NA	NA	7718	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGATCCGTACGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	50093874	50090977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_50091775_50093221_50093422_50093640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003539	chr11	-	1065	3	NNC	ENSMUSG00000015837.16	novel	2037	8	NA	NA	7753	-124	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAATGGCCACTCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	50093839	50091102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_50091775_50093221_50093416_50093640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003540	chr11	-	1311	6	NNC	ENSMUSG00000015837.16	novel	2037	8	NA	NA	3127	98	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTCTTGCCGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	50098465	50091339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_50091775_50093221_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003541	chr11	-	1104	7	ISM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	95	2289	33	-1830	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCTGAAGGAAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	50101559	50093267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003542	chr11	+	910	5	ISM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	8193	-2	8193	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTCATAGGTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	50124354	50125932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003543	chr11	-	316	1	Genic_Genomic	ENSMUSG00000020368.16	novel	NA	NA	NA	NA	31289	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACACTGAATGTTTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	50185102	50184786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_50184800_50185100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003544	chr11	-	1797	1	ISM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	29469	447	29360	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATCTGTTTCATCATT	NA	NA	NA	NA	NA	NA	NA	NA	50187031	50185234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50185200_50187000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003545	chr11	-	2251	4	ISM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	27326	0	27326	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATCTGTTTCATCATT	NA	NA	NA	NA	NA	NA	NA	NA	50189065	50185234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003546	chr11	-	398	3	ISM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	26228	2917	26228	-2858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAGAAGAGAAGAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	50190163	50188151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50188222_50188943_50189064_50189955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003547	chr11	-	400	3	ISM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	23692	4809	23692	-4750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCATTAGTGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	50192699	50190043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50190172_50191724_50191882_50192584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003548	chr11	-	451	3	ISM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	21060	6489	21060	-6430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCTGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50195331	50191723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50191882_50192584_50192699_50195152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003549	chr11	-	457	3	ISM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	17182	9917	17182	-9858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTTGGAGATCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	50199209	50195151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50195343_50198296_50198490_50199136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003550	chr11	-	406	3	ISM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	16633	13075	16633	-13016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTATACATTAAGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	50199758	50198309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50198490_50199136_50199219_50199614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003551	chr11	-	320	3	ISM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	13884	15904	13775	-15904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTTCCATTTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	50202616	50201197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50201258_50201620_50201695_50202430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003552	chr11	-	568	3	ISM	ENSMUSG00000020368.16	ENST00000681903.1	4191	15	223	16384	223	-16325	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTCCCTGGGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	50250163	50201618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50201695_50202430_50202608_50249848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003553	chr11	-	374	2	ISM	ENSMUSG00000020368.16	ENST00000681712.1	4225	15	377	17194	377	-17135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGCAGATCAGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	50250009	50202428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50202612_50249818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003554	chr11	+	1326	4	ISM	ENSMUSG00000007850.17	ENST00000356731.9	3015	13	93	4961	93	-4961	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTAAAGAAACACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	50268333	50272390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003555	chr11	+	891	3	ISM	ENSMUSG00000007850.17	ENST00000510411.5	2062	12	6337	0	6337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACACTCTGTCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	50275470	50277351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_50275564_50275967_50276018_50276603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003556	chr11	+	753	1	NIC	ENSMUSG00000007850.17	novel	2427	15	NA	NA	7469	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	50276602	50277355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_50276600_50277400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003557	chr11	-	237	1	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	41603	0	41603	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGCCTCCAGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	50280349	50280112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50280100_50280300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003558	chr11	-	277	2	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	40772	456	40772	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGTGCCAAACTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	50281180	50280568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50280786_50281120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003559	chr11	-	220	2	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	29588	9085	29588	-9085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGATCTGGGCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	50292364	50289197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50289318_50292264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003560	chr11	-	260	2	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	24642	15193	24642	-15193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAGATGTTTCACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	50297310	50295305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50295449_50297193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003561	chr11	-	214	3	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	16543	18561	16543	-18561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAGCGAGAAGAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	50305409	50298673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50298752_50301392_50301463_50305343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003562	chr11	-	275	3	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	10702	27896	10702	-27896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTGGATTTAGGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	50311250	50308008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50308135_50310447_50310550_50311203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003563	chr11	-	296	2	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	9319	31090	9319	-31090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAAGAAGTAGTAACGC	NA	NA	NA	NA	NA	NA	NA	NA	50312633	50311202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50311322_50312456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003564	chr11	-	396	2	ISM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	112	32352	112	-32352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAAGGTGAGCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	50321840	50312464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_50312631_50321610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003565	chr11	-	1846	5	FSM	ENSMUSG00000048728.16	ENST00000519564.2	1851	5	9	-4	9	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGAGGGGATGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	50778318	50763802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_50765103_50774010_50774101_50774511_50774639_50777195_50777326_50778119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003566	chr11	-	1270	1	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	5478	0	5478	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTCTTGACCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	51492196	51490926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51490900_51492200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003567	chr11	-	1258	4	ISM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	2028	517	2028	252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGATCCTCAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	51495646	51491443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003568	chr11	-	209	2	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	5077	117	5077	-117	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATTTCCCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	51492597	51492117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51492306_51492576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003569	chr11	-	505	4	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	2069	567	2069	-567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGAGGCCCTATCTACT	NA	NA	NA	NA	NA	NA	NA	NA	51495605	51492567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51492718_51493419_51493523_51495226_51495359_51495485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003570	chr11	-	296	2	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	1222	3513	1222	-3513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAATACTTCGGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	51496452	51495513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51495645_51496287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003571	chr11	-	526	3	ISM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	62	4296	62	-4296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAAAGGTAAGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	51497612	51496296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51496457_51497166_51497414_51497493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003572	chr11	+	1030	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	13	-1	13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCAGTTCTAACGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	51510574	51514542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003573	chr11	+	633	1	Genic_Genomic	ENSMUSG00000001056.4	novel	NA	NA	NA	NA	3352	5	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTCTAACGGGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	51513913	51514546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_51513900_51514500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003574	chr11	-	815	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTATGAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	51579481	51576211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_51576920_51579374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003575	chr11	-	792	2	NNC	ENSMUSG00000007777.10	novel	813	2	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	51579462	51576212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_51576917_51579374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003576	chr11	-	721	1	NIC	ENSMUSG00000007777.10	novel	813	2	NA	NA	2547	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	51576933	51576212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_51576200_51576900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003577	chr11	-	108	2	ISM	ENSMUSG00000036391.17	ENSMUST00000109092.8	2094	11	32768	216	32511	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAACATTTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	51614490	51612732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51612761_51614410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003578	chr11	-	105	2	ISM	ENSMUSG00000036391.17	ENSMUST00000109092.8	2094	11	26908	4872	26651	-4872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTATGGAGAACCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	51620350	51617388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51617422_51620278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003579	chr11	-	128	2	ISM	ENSMUSG00000036391.17	ENSMUST00000109092.8	2094	11	22603	11806	22346	-11806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCAATCTTCTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	51624655	51624322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51624392_51624596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003580	chr11	-	111	2	ISM	ENSMUSG00000036391.17	ENSMUST00000109092.8	2094	11	19998	12944	19741	-12944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCGGCTCATAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	51627260	51625460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51625489_51627177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003581	chr11	-	119	2	ISM	ENSMUSG00000036391.17	ENSMUST00000109092.8	2094	11	336	22211	79	-22211	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATCCATTCTCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	51646922	51634727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51634828_51646903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003582	chr11	-	1542	3	ISM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	32170	-2	31270	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTGTCTTTCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	51716239	51707587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51708528_51709323_51709456_51715769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003583	chr11	-	573	1	ISM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	40186	3440	39215	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACCCAGGCCCTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	51708294	51707721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51707700_51708300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003584	chr11	-	1054	4	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	31681	472	31270	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGGCAAGGGGACGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	51716239	51708193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003585	chr11	-	622	3	ISM	ENSMUSG00000020387.16	ENST00000681498.1	1688	10	30005	86	30005	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAAACACACCATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	51717504	51711985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51712024_51715769_51716235_51717385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003586	chr11	-	601	3	ISM	ENSMUSG00000020387.16	ENST00000681498.1	1688	10	28303	3965	28303	-3965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGACGAGGTGGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	51719206	51715864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51716235_51717385_51717503_51719092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003587	chr11	-	633	4	ISM	ENSMUSG00000020387.16	ENST00000681498.1	1688	10	21020	7191	21020	-7191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGCTTTCAGGGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	51726489	51719090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51719261_51721242_51721455_51722079_51722241_51726399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003588	chr11	+	900	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	53	879	53	-879	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTGAAGTAGCAGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	51858540	51867282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_51858785_51860970_51861071_51866726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003589	chr11	+	584	1	Genic_Genomic	ENSMUSG00000020392.9	novel	NA	NA	NA	NA	9092	2	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGGTTCAAGTTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	51867579	51868163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_51867600_51868200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003590	chr11	-	1199	1	Genic_Genomic	ENSMUSG00000020390.13	novel	NA	NA	NA	NA	13792	3	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGCCTCCTAGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	51877519	51876320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_51876300_51877500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003591	chr11	-	1465	5	ISM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	2585	136	2585	-136	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTAATACAAAGCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	51888726	51876459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003592	chr11	-	1182	4	NNC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	2593	-415	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGATTAAAAAGAAAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	51888718	51876738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_51877638_51879438_51879528_51882220_51882311_51888614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003593	chr11	+	499	3	ISM	ENSMUSG00000020389.20	ENSMUST00000063321.13	2008	13	-15	22615	1	-16310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAGTAAGCGGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	51895052	51902081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_51895245_51895736_51895920_51901957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003594	chr11	+	722	4	ISM	ENSMUSG00000020389.20	ENSMUST00000109078.8	2216	9	18511	540	11607	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTAGAGTGAGAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	51913562	51918170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_51913705_51916665_51916755_51917585_51917746_51917839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003595	chr11	+	646	4	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	14738	7570	14738	2054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAGATACTAGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	51916693	51920764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_51916755_51917585_51917746_51917839_51918169_51920668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003596	chr11	+	740	4	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	15636	4983	15636	-1278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAGATGCTCGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	51917591	51923351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_51917746_51917839_51918169_51920668_51920763_51923188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003597	chr11	+	662	4	ISM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	15906	3896	15906	-191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACACTTTATAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	51917861	51924438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_51918169_51920668_51920763_51923188_51923352_51924340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003598	chr11	+	460	1	Genic_Genomic	ENSMUSG00000020389.20	novel	NA	NA	NA	NA	26589	12	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTGGCTCATAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	51928544	51929004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_51928500_51929000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003599	chr11	+	1233	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	12	195	12	-195	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTACTTCATGTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	52122847	52137490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003600	chr11	+	625	2	ISM	ENSMUSG00000036309.15	ENST00000521216.5	808	5	8110	-99	8110	99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACCATGTGGGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	52135773	52137261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_52135949_52136811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003601	chr11	+	673	1	Genic_Genomic	ENSMUSG00000036309.15	novel	NA	NA	NA	NA	9354	5	mono-exon	FALSE	NA	NA	NA	NA	NA	619	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTCTTAATGAATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	52137017	52137690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_52137000_52137700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003602	chr11	-	897	1	ISM	ENSMUSG00000000782.17	ENSMUST00000086844.10	2471	10	28982	322	28970	1	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGTTTTAACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52144416	52143519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_52143500_52144400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003603	chr11	-	1589	4	ISM	ENSMUSG00000000782.17	ENST00000395023.5	2084	9	25448	0	25448	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTGTTTTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	52147938	52143520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003604	chr11	+	528	4	ISM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	38	12854	38	-11974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGAGCTCCCTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	52251724	52267370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003605	chr11	+	246	3	ISM	ENSMUSG00000020402.12	ENST00000603132.1	844	8	627	11816	627	-11816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTCTCCTTACCCACG	NA	NA	NA	NA	NA	NA	NA	NA	52265755	52267528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_52265795_52267217_52267371_52267474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003606	chr11	+	435	3	ISM	ENSMUSG00000020402.12	ENST00000603132.1	844	8	2088	4440	2088	-4440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTATGTGGGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	52267216	52274904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_52267371_52267474_52267528_52274676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003607	chr11	+	682	4	ISM	ENSMUSG00000020402.12	ENST00000603132.1	844	8	9547	-160	9547	154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATTTCAGAGGTACAGC	NA	NA	NA	NA	NA	NA	NA	NA	52274675	52279504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_52274903_52276409_52276561_52278242_52278301_52279258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003608	chr11	+	422	3	ISM	ENSMUSG00000020402.12	ENSMUST00000020673.3	891	8	9589	1063	9550	-1057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAAAACCAGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	52274678	52278287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_52274905_52276409_52276561_52278242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003609	chr11	+	263	1	ISM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	28275	0	14833	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	52279961	52280224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_52280000_52280200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003610	chr11	+	2471	3	FSM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCTGTTAGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	52287256	52299556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_52287431_52293872_52294385_52297771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003611	chr11	+	1988	3	NNC	ENSMUSG00000036275.14	novel	2467	3	NA	NA	67	-408	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACCTGTTTAACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	52287321	52299142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_52287431_52293876_52294385_52297771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003612	chr11	+	498	1	Genic_Genomic	ENSMUSG00000036275.14	novel	NA	NA	NA	NA	11807	4	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTAGTGTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52299061	52299559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_52299100_52299600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003613	chr11	-	2284	3	ISM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	37458	0	37458	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTTAATTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	53153826	53150640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_53152643_53153090_53153253_53153706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003614	chr11	+	503	3	FSM	ENSMUSG00000018239.10	ENST00000513848.5	492	3	0	-11	0	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACACCGGGACGGT	NA	NA	NA	NA	NA	NA	NA	NA	53215517	53223421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_53215569_53218095_53218255_53223128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003615	chr11	+	200	2	FSM	ENSMUSG00000018239.10	ENST00000512933.1	197	2	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAAGGTAGGTTTACATG	NA	NA	NA	NA	NA	NA	NA	NA	53215524	53218247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_53215573_53218095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003616	chr11	+	164	1	NIC	ENSMUSG00000018239.10	novel	1267	4	NA	NA	2564	8	mono-exon	FALSE	NA	NA	NA	NA	NA	500	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGTTTACATGTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	53218089	53218253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_53218100_53218300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003617	chr11	+	440	2	NNC	ENSMUSG00000018239.10	novel	492	3	NA	NA	2571	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCTCTGTACACCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	53218096	53223417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_53218255_53223135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003618	chr11	+	933	3	ISM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	2612	249	2592	-249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAATGAATGCTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	53218117	53223879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53218255_53221513_53221559_53223128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003619	chr11	+	1005	1	Genic_Genomic	ENSMUSG00000018239.10	novel	NA	NA	NA	NA	7601	3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAAGTTTCAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	53223126	53224131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_53223100_53224100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003620	chr11	-	886	1	Genic_Genomic	ENSMUSG00000044894.15	novel	NA	NA	NA	NA	1639	12	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGTGTTATAAGTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	53319622	53318736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_53318700_53319600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003621	chr11	-	1124	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	1	396	1	-396	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCACTTTGTGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	53321653	53319144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_53319978_53321362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003622	chr11	-	199	1	NIC	ENSMUSG00000044894.15	novel	1521	2	NA	NA	1283	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	53319978	53319779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_53319800_53320000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003623	chr11	-	341	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	2	62	2	-62	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTCTGGGAGAGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	53321652	53319841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_53319978_53321362_53321530_53321614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003624	chr11	+	988	4	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	565	1168	565	-1168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGTTCAAGAGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	53354645	53356690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53355021_53355101_53355158_53355946_53356136_53356322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003625	chr11	+	760	3	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	2438	380	2438	-380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATAGGTTGAGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	53356518	53357478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53356872_53356950_53357084_53357204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003626	chr11	+	594	3	ISM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	2937	-1	2937	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCTGGGCCCCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	53357017	53357859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53357084_53357204_53357478_53357604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003627	chr11	+	491	2	ISM	ENSMUSG00000018387.13	ENSMUST00000018531.12	2630	7	9166	300	3142	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCTCAGCCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	53357222	53357825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53357478_53357589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003628	chr11	+	258	1	ISM	ENSMUSG00000018387.13	ENSMUST00000109013.9	3312	8	9571	733	3522	2	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGGGCCCCAGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	53357602	53357860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53357600_53357900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003629	chr11	+	1614	3	ISM	ENSMUSG00000018398.19	ENSMUST00000121334.8	2801	10	17714	-12	17557	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCCAAAGCCTGACATC	NA	NA	NA	NA	NA	NA	NA	NA	53428310	53440404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53428447_53428551_53428743_53439117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003630	chr11	+	1326	2	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	18034	1696	17853	501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTATCCGAGACGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	53428606	53433226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53428743_53432036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003631	chr11	+	1209	1	ISM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	23141	0	22960	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	53433713	53434922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53433700_53434900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003632	chr11	+	1150	2	ISM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	5421	-1	5421	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	53666741	53668150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53666880_53667138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003633	chr11	+	1014	1	Genic_Genomic	ENSMUSG00000018899.18	novel	NA	NA	NA	NA	5816	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTGGCTTTTTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	53667136	53668150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_53667100_53668200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003634	chr11	-	1009	6	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	5227	-1	5145	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTAGTGTCTGGCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	53954613	53945752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003635	chr11	-	684	4	NNC	ENSMUSG00000020388.13	novel	1182	7	NA	NA	12698	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTAGTGTCTGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	53947060	53945753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_53946066_53946184_53946301_53946615_53946780_53946968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003636	chr11	-	765	6	ISM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	17	517	17	-497	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCAAACCAGCAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	53959823	53946270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003637	chr11	+	164	2	ISM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	45	30002	17	-30002	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGAGTTAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	53991833	53992476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53991867_53992345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003638	chr11	+	152	2	ISM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	560	21417	532	-21417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTTGGTGTTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	53992348	54001061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_53992474_54001034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003639	chr11	+	339	3	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	9231	20107	9215	-20097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGATGCTTCGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	54001031	54002381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54001141_54001811_54001909_54002248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003640	chr11	+	335	3	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	10064	17387	10048	-17377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACACCTCCATTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	54001864	54005101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54001909_54002248_54002401_54004962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003641	chr11	+	478	3	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	10500	13979	10484	-13969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGATTAGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	54002300	54008509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54002401_54004962_54005101_54008269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003642	chr11	+	593	3	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	16487	11416	16471	-11406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCTCTGAGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	54008287	54011072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54008510_54009959_54010154_54010895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003643	chr11	+	342	3	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	18255	6939	18239	-6929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGAGTGGTGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	54010055	54015549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54010154_54010895_54011073_54015482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003644	chr11	+	136	2	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	23969	5866	23953	-5856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTTGACTTCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	54015769	54016622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54015872_54016588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003645	chr11	+	151	2	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	28088	2100	28072	-2090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCTTGAGGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	54019888	54020388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54019943_54020291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003646	chr11	+	562	2	ISM	ENSMUSG00000018906.15	ENSMUST00000174616.8	2094	15	28489	10	28473	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAATAGCCTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	54020289	54022478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54020389_54022015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003647	chr11	+	494	1	NIC	ENSMUSG00000018906.15	novel	2104	15	NA	NA	30198	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	54022014	54022508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_54022000_54022500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003648	chr11	+	519	2	ISM	ENSMUSG00000020333.18	ENSMUST00000094194.10	2554	21	33133	-3	33133	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTCCATTAAACATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	54243814	54252330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54243889_54251885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003649	chr11	+	450	1	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	41199	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTCCATTAAACATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	54251880	54252330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_54251900_54252300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003650	chr11	+	573	1	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGACAGGCTAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	54292818	54293391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr11_+_54292800_54293400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003651	chr11	-	1026	1	ISM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	69194	0	69194	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	54609307	54608281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54608300_54609300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003652	chr11	-	1559	5	ISM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	31185	1325	31185	-1325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATTCACAGTGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	54647316	54609606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003653	chr11	+	641	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTTACTCTGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	54757205	54761329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_54757427_54760673_54760779_54761014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003654	chr11	+	630	3	NNC	ENSMUSG00000020267.7	novel	636	3	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTGTTACTCTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	54757213	54761328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_54757427_54760673_54760777_54761014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003655	chr11	+	594	3	NNC	ENSMUSG00000020267.7	novel	636	3	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	54757243	54761327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_54757427_54760673_54760779_54761021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003656	chr11	+	652	4	ISM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	1	1238	1	-1238	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGTGGGTAATATGGA	NA	NA	NA	NA	NA	NA	NA	NA	54793598	54799965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003657	chr11	+	379	2	NNC	ENSMUSG00000018339.13	novel	1594	5	NA	NA	14	-3135	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGCCAGCTACTGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	54793611	54798068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_54793879_54797956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003658	chr11	+	742	4	ISM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	4369	557	4369	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACACGTGACAATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	54797966	54800646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54798107_54799366_54799485_54799865_54799966_54800262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003659	chr11	+	383	2	ISM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	6257	669	6257	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGCTCTTCAGGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	54799854	54800534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_54799966_54800262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003660	chr11	+	386	1	Genic_Genomic	ENSMUSG00000018339.13	novel	NA	NA	NA	NA	7221	1	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCTACTTGGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	54800818	54801204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_54800800_54801200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003661	chr11	-	267	1	ISM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	45069	2	29793	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	54801879	54801612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54801600_54801900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003662	chr11	-	503	3	ISM	ENSMUSG00000020400.18	ENST00000521591.6	2705	16	23891	563	23857	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGGGCGCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	54807815	54802179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54802398_54806322_54806414_54807621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003663	chr11	-	387	3	ISM	ENSMUSG00000020400.18	ENST00000522226.5	1839	14	22958	0	22918	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCGTGTGTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54808754	54807621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54807814_54808081_54808148_54808625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003664	chr11	-	293	3	ISM	ENSMUSG00000020400.18	ENST00000523200.5	1607	13	22107	33	22107	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCCCTCAAACAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54809565	54808114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54808148_54808625_54808752_54809431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003665	chr11	-	401	3	NNC	ENSMUSG00000020400.18	novel	1607	13	NA	NA	16615	-1348	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCCGAGAGCTGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	54815057	54809429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_54809564_54811586_54811716_54814919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003666	chr11	-	281	3	ISM	ENSMUSG00000020400.18	ENST00000523200.5	1607	13	14060	6842	14060	-6842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGTGGACAGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	54817612	54814923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54815056_54815201_54815268_54817529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003667	chr11	-	215	2	ISM	ENSMUSG00000020400.18	ENST00000523200.5	1607	13	11627	9448	11627	-9448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGGCCAAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	54820045	54817529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54817620_54819920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003668	chr11	-	413	3	ISM	ENSMUSG00000020400.18	ENST00000523200.5	1607	13	6665	11838	6665	-11838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCCCAAGCTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	54825007	54819919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54820045_54821590_54821686_54824814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003669	chr11	-	488	3	ISM	ENSMUSG00000020400.18	ENST00000523200.5	1607	13	1134	16733	1134	-16733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGCCAGCAAGAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	54830538	54824814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54825007_54827286_54827368_54830323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003670	chr11	-	371	2	ISM	ENSMUSG00000020400.18	ENST00000523200.5	1607	13	-39	22284	0	-22284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACAGGGCCTACCCATT	NA	NA	NA	NA	NA	NA	NA	NA	54831711	54830365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_54830562_54831536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003671	chr11	+	3875	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	11	241	11	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGCCAAGGCCACGAAT	NA	NA	NA	NA	NA	NA	NA	NA	54988951	55003614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003672	chr11	+	3443	1	ISM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	11472	0	11472	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGTTAATTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	55000412	55003855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_55000400_55003900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003673	chr11	+	2845	1	ISM	ENSMUSG00000020261.16	ENSMUST00000108872.9	5264	11	29136	0	19691	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55124311	55127156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_55124300_55127200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003674	chr11	-	721	1	Genic_Genomic	ENSMUSG00000018593.14	novel	NA	NA	NA	NA	24680	2	mono-exon	FALSE	NA	NA	NA	NA	NA	775	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCCCGGGTGATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	55286044	55285323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_55285300_55286000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003675	chr11	-	1336	6	ISM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	14597	453	14597	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCATGTTTGGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	55296127	55285778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003676	chr11	-	712	4	NNC	ENSMUSG00000018593.14	novel	2115	10	NA	NA	20573	89	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACCCAGTGTCTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	55290151	55286157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_55286440_55286626_55286776_55289373_55289523_55290019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003677	chr11	-	663	6	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	13692	481	13300	-481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAACATTGCACCACAC	NA	NA	NA	NA	NA	NA	NA	NA	55297424	55286727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003678	chr11	-	652	6	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	13036	3124	12644	-3124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCAGGGTCCTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	55298080	55289370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003679	chr11	-	730	6	ISM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	213	6551	3	-6551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACATCGGACCATGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	55310903	55292797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003680	chr11	-	403	3	ISM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	6274	-5	6274	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTGTATGTTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	55345791	55337461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_55337611_55341282_55341452_55345706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003681	chr11	-	152	1	Genic_Genomic	ENSMUSG00000018585.10	novel	NA	NA	NA	NA	14451	4	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGGTGTATGTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	55337614	55337462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_55337500_55337600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003682	chr11	-	399	3	ISM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	-6	3820	-6	-3820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGGGTGAGGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	55352071	55341286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_55341452_55345706_55345783_55351913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003683	chr11	-	234	2	ISM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	3	8231	3	-8231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTGGAGATGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	55352062	55345697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_55345783_55351913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003684	chr11	+	3140	4	ISM	ENSMUSG00000018583.6_ENSMUSG00000098906.3	ENST00000678646.1	2749	11	12055	-1300	-3548	993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCACTGGGGTGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	55388503	55393100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_55388589_55388738_55388868_55389383_55389494_55390284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003685	chr11	+	398	1	ISM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	30893	3863	14954	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTGGACAAGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	55391403	55391801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_55391400_55391800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003686	chr11	+	2876	1	Genic_Genomic	ENSMUSG00000018583.6	novel	NA	NA	NA	NA	16344	5	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTCTTTTTTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	55392793	55395669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_55392800_55395700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003687	chr11	+	574	1	ISM	ENSMUSG00000020524.17	ENSMUST00000036315.16	5546	16	317654	207	315937	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGGCCTTTTATTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	57220289	57220863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57220300_57220900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003688	chr11	-	733	1	ISM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	34892	0	30462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	57374551	57373818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_57373800_57374600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003689	chr11	-	829	3	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	28413	-345	23997	345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCTTCAAATGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	57381016	57374272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_57374967_57378392_57378447_57380935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003690	chr11	-	730	6	ISM	ENSMUSG00000020523.15	ENST00000351797.9	1267	12	-99	23803	-99	-23083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGGAGATGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	57405112	57397700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003691	chr11	+	3134	2	ISM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	9175	1640	9175	-1640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAGGTAGACATATTGA	NA	NA	NA	NA	NA	NA	NA	NA	57418687	57423000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57419116_57420294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003692	chr11	+	2791	1	ISM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	12361	0	12338	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGAATGATGTATATTA	NA	NA	NA	NA	NA	NA	NA	NA	57421850	57424641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57421800_57424600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003693	chr11	+	466	3	FSM	ENSMUSG00000020520.15	ENSMUST00000108846.2	1745	3	29	1250	7	-1250	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCACGTCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	57536319	57616487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_57536544_57612120_57612224_57616348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003694	chr11	+	411	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	75806	47589	75806	10233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCCTCAGCCACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	57612118	57627970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57612224_57616348_57616488_57627803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003695	chr11	+	495	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	80033	15056	80033	-15056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAACTTATCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	57616345	57660503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57616488_57627803_57627971_57660317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003696	chr11	+	358	1	ISM	ENSMUSG00000020520.15	ENSMUST00000108846.2	1745	3	81089	0	81067	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAACGGTGTCTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	57617379	57617737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57617400_57617700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003697	chr11	+	383	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	91580	13145	91580	-13145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTCTCCCATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	57627892	57662414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57627971_57660317_57660502_57662293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003698	chr11	+	629	4	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	124008	3462	124008	-3462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGAATGGAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	57660320	57672097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57660502_57662293_57662412_57668456_57668565_57671875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003699	chr11	+	434	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	132160	2408	132160	-2408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCACTTAAAGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	57668472	57673151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57668565_57671875_57672098_57673031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003700	chr11	+	487	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	135566	893	135566	-893	internal_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGGCGTGGTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	57671878	57674666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57672098_57673031_57673149_57674515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003701	chr11	+	435	3	ISM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	136717	-2	136717	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTGACAAACCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57673029	57675561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57673149_57674515_57674666_57675395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003702	chr11	+	676	1	ISM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	141397	0	141352	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTGTCACCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	57677664	57678340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57677700_57678300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003703	chr11	+	625	3	FSM	ENSMUSG00000020519.6	ENST00000440364.6	685	3	5	55	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCGGTCAGGAGGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	57692866	57701044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_57693116_57698849_57698949_57700767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003704	chr11	+	377	3	FSM	ENSMUSG00000020519.6	ENST00000426761.2	670	3	60	233	60	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAGAGGGCAGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	57692921	57700866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_57693116_57698864_57698949_57700767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003705	chr11	+	316	1	Genic_Genomic	ENSMUSG00000020519.6	novel	NA	NA	NA	NA	7928	6	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCAGACTGGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	57700789	57701105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_57700800_57701100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003706	chr11	+	224	2	ISM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	23	8912	23	-8912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGAGGTGTGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	57995077	58000508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_57995175_58000381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003707	chr11	+	264	2	ISM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	5408	7201	-1622	-7201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGGAGTACCCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58000462	58002219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58000593_58002085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003708	chr11	+	832	5	ISM	ENSMUSG00000020515.14	ENST00000517876.5	1034	6	58	883	58	-879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAAGTCTTCCTCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	58002142	58008541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003709	chr11	+	680	4	ISM	ENSMUSG00000020515.14	ENST00000517876.5	1034	6	2689	-1	2689	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGGTCTTTGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	58004773	58009425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58004921_58006090_58006202_58008264_58008541_58009279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003710	chr11	+	143	1	ISM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	14223	0	7193	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	58009277	58009420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58009300_58009400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003711	chr11	+	544	5	ISM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	1449	-1	1449	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	58063935	58070392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003712	chr11	+	292	1	Genic_Genomic	ENSMUSG00000020514.9	novel	NA	NA	NA	NA	7614	1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTCATTGAATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	58070100	58070392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_58070100_58070400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003713	chr11	+	367	3	ISM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	4284	299	4284	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCACCCAGCCCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	58202281	58205154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58202397_58204791_58204892_58205002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003714	chr11	+	425	1	Genic_Genomic	ENSMUSG00000037243.18	novel	NA	NA	NA	NA	7032	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATAAGAATCTGGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	58205029	58205454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_58205000_58205500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003715	chr11	-	2041	1	Genic_Genomic	ENSMUSG00000049755.15	novel	NA	NA	NA	NA	5960	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAGTGTCACTTCGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	58207979	58205938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_58205900_58208000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003716	chr11	-	2857	4	FSM	ENSMUSG00000049755.15	ENSMUST00000057836.12	2862	4	6	-1	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGTTTCAATAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58214143	58205948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_58208361_58210149_58210417_58213425_58213556_58214095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003717	chr11	+	465	2	ISM	ENSMUSG00000013646.18	ENSMUST00000116376.9	3016	7	5	16084	5	-16081	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGCATAGGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	58221554	58222470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58221629_58222079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003718	chr11	+	1332	2	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	14566	634	14566	-634	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAGTGGGTCCCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	58236141	58237917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58236312_58236755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003719	chr11	+	1307	1	ISM	ENSMUSG00000013646.18	ENSMUST00000116376.9	3016	7	15698	0	15672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACTGTCTGTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	58237247	58238554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58237200_58238600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003720	chr11	-	1117	1	Genic_Genomic	ENSMUSG00000020496.11	novel	NA	NA	NA	NA	5513	1	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATACCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	58824229	58823112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_58823100_58824200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003721	chr11	-	1926	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	0	23	0	-23	multi-exon	TRUE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAAGTGGTTTGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	58829742	58823136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003722	chr11	+	466	1	FSM	ENSMUSG00000078851.5	ENSMUST00000108817.5	2146	1	1681	-1	1681	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCGGAGGAACAGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	58847191	58847657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_58847200_58847700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003723	chr11	+	858	4	NNC	ENSMUSG00000020455.17	novel	1410	5	NA	NA	8	-1805	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGCACAGTCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	58869071	58879756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_58869471_58872066_58872167_58872818_58873050_58879628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003724	chr11	+	817	3	ISM	ENSMUSG00000020455.17	ENST00000284551.11	1410	5	3784	61	3784	-61	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTATGACTATCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	58872847	58881500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58873050_58879628_58879756_58881012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003725	chr11	+	503	1	ISM	ENSMUSG00000020455.17	ENSMUST00000108809.8	3522	5	12145	715	12000	5	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAAGAAAGTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	58881063	58881566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_58881100_58881600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003726	chr11	-	1115	3	NNC	ENSMUSG00000061462.19	novel	8959	33	NA	NA	379	-88906	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGTATCAGGTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	59026810	59024538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_59024787_59025370_59025647_59026219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003727	chr11	+	908	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	33	-1	-13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACAGCTTCAGACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59093350	59096961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003728	chr11	+	549	3	ISM	ENSMUSG00000036860.15	ENSMUST00000108784.4	729	4	1632	0	1632	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	59094995	59096714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59095082_59095360_59095584_59096474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003729	chr11	+	807	4	ISM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	804	-1	804	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTATATTATCTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	59099950	59101565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59100027_59100133_59100220_59100798_59100931_59101052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003730	chr11	-	1796	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	7	-3	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTGTCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	59119089	59102236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003731	chr11	-	1289	1	Genic_Genomic	ENSMUSG00000048076.15	novel	NA	NA	NA	NA	15033	1	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTGTCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	59103525	59102236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_59102200_59103500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003732	chr11	-	1353	3	ISM	ENSMUSG00000048076.15	ENST00000541182.1	1814	5	14470	175	14470	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTGTTAAATTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	59104088	59102413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59103522_59103646_59103772_59103968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003733	chr11	-	1895	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGGGTCTATAACAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	59340823	59297958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003734	chr11	+	1412	2	ISM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	4920	1870	4920	-1870	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGCCTCCATGAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	59345790	59347429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59345906_59346132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003735	chr11	-	1825	2	ISM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	7402	1326	7402	-1326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTAAGGCTTCAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	59355898	59353348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59355113_59355837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003736	chr11	-	644	1	ISM	ENSMUSG00000020472.15	ENSMUST00000013262.15	4064	10	20481	0	17649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	59376989	59376345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59376300_59377000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003737	chr11	-	1805	7	FSM	ENSMUSG00000020472.15	ENST00000294753.8	1804	7	1	-2	1	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCCCCACAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	59394637	59377887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_59378644_59382940_59383055_59383996_59384087_59384514_59384674_59390369_59390447_59393745_59393927_59394209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003738	chr11	-	1782	7	NNC	ENSMUSG00000020472.15	novel	1804	7	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTGGCCCCACAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	59394625	59377888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_59378644_59382940_59383045_59383996_59384087_59384514_59384674_59390369_59390447_59393745_59393927_59394209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003739	chr11	+	866	3	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	465	17647	465	-17647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATAACGACGAGGCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	59434102	59439450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59434220_59437599_59437714_59438815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003740	chr11	+	919	3	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	6309	10401	6309	-10401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGTGGGACTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	59439946	59446696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59440572_59442596_59442768_59446573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003741	chr11	-	194	1	FSM	ENSMUSG00000059610.6	ENSMUST00000071943.6	1115	1	834	87	834	2	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAAATGTAATCCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	59461805	59461611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_59461600_59461800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003742	chr11	-	318	2	FSM	ENSMUSG00000059610.6	ENST00000641149.1	928	2	104	506	104	-506	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATGGCCTGGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	59464398	59462119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_59462286_59464246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003743	chr11	+	656	1	ISM	ENSMUSG00000005417.18	ENSMUST00000072031.13	8718	23	117704	6	117625	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCATGCATATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	59671024	59671680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59671000_59671700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003744	chr11	-	1198	1	Genic_Genomic	ENSMUSG00000032633.13	novel	NA	NA	NA	NA	16991	8	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGTACCAGGGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	59683423	59682225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_59682200_59683400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003745	chr11	-	1206	2	ISM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	15395	-76	15395	76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTATGTGCTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	59685019	59682539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59683638_59684911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003746	chr11	-	1093	7	ISM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	11811	0	8995	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGTGTGTTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59718853	59708620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003747	chr11	-	642	5	ISM	ENSMUSG00000019373.12	ENST00000505334.1	1021	9	9024	0	9024	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGACCAAGAGGTAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	59718824	59710841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003748	chr11	-	613	5	ISM	ENSMUSG00000019373.12	ENST00000505334.1	1021	9	4089	4268	4089	-4268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAAAGGTGAGGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	59723759	59715109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59715275_59717115_59717257_59718687_59718852_59720972_59721066_59723709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003749	chr11	-	628	6	ISM	ENSMUSG00000019373.12	ENST00000505334.1	1021	9	22	6281	22	-6281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGGTAAGTTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59727826	59717122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59717257_59718687_59718852_59720972_59721066_59723709_59723760_59723893_59723971_59727716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003750	chr11	+	324	3	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	8	15144	8	-15144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGAGTCCGTTCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	59739036	59751636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59739199_59743616_59743718_59751575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003751	chr11	+	291	3	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	4595	1266	4595	-1266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGACGGTGGGAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	59743623	59765514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59743718_59751575_59751637_59765378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003752	chr11	+	312	3	ISM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	12582	-1	12582	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGCTCTCTCGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	59751610	59766781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59751637_59765378_59765514_59766630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003753	chr11	+	192	2	NNC	ENSMUSG00000032615.15	novel	617	5	NA	NA	26365	-62	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCATGGGCAGACGACT	NA	NA	NA	NA	NA	NA	NA	NA	59765393	59766718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_59765498_59766630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003754	chr11	+	155	1	NIC	ENSMUSG00000032615.15	novel	1306	5	NA	NA	27599	2	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTCTCTCGTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	59766627	59766782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_59766600_59766800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003755	chr11	+	139	1	ISM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	28322	0	28192	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59767220	59767359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_59767200_59767400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003756	chr11	-	465	2	FSM	ENSMUSG00000085260.8	ENSMUST00000146334.2	527	2	63	-1	62	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAAGGTATATCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	59838905	59837713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_59837923_59838649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003757	chr11	+	1930	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	-6	-4	-6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGCCTGTTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59839025	59853035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_59839305_59851384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003758	chr11	-	1589	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTTGCTTTTAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	59855748	59854006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_59855193_59855345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003759	chr11	-	817	1	ISM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	683	264	601	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGCCATGGCCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	59855087	59854270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_59854300_59855100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003760	chr11	-	1109	2	FSM	ENSMUSG00000049892.8	ENST00000579152.1	1191	2	5	77	5	-77	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGTGAGACTTAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	59855683	59854347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_59855119_59855345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003761	chr11	+	2574	1	ISM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	25442	0	25442	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAATTTGTAAGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	60333529	60336103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60333500_60336100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003762	chr11	+	235	2	ISM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	-1	11438	-1	-11438	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGATGGTCTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	60345495	60347537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60345570_60347376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003763	chr11	+	308	3	ISM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	1879	8066	1879	-8066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGTGGGAGCAGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	60347375	60350909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60347538_60350267_60350358_60350853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003764	chr11	+	247	3	ISM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	4769	7269	4769	-7269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAGCAGGGCAGGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	60350265	60351706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60350358_60350853_60350915_60351612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003765	chr11	+	205	3	ISM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	5371	6761	5371	-6761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGTATGCTCTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	60350867	60352214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60350915_60351612_60351704_60352147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003766	chr11	+	260	3	ISM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	6655	5876	6655	-5876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTGCAGTGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	60352151	60353099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60352221_60352339_60352431_60352999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003767	chr11	+	255	4	ISM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	7887	435	7887	-435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCAAGTACGCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	60353383	60358540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60353461_60354959_60355049_60355658_60355718_60358510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003768	chr11	+	274	4	ISM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	9461	0	9461	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGACACCTTCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	60354957	60358975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60355049_60355658_60355718_60358510_60358549_60358889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003769	chr11	+	693	2	ISM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	15736	3738	15736	-3738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTTGCCAGCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	60444539	60445600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60444696_60445063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003770	chr11	+	573	1	ISM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	19962	0	19962	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTTTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	60448765	60449338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60448800_60449300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003771	chr11	+	1996	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	1625	3770	1235	3450	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCACTGGAAAAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	60669975	60675343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_60671208_60674579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003772	chr11	-	667	1	ISM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	22495	0	15640	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTCATATTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	60679596	60678929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_60678900_60679600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003773	chr11	+	1175	4	ISM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	21108	-3	21060	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCTTAGTTTGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	60742564	60749252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60742785_60743244_60743338_60746525_60746679_60748543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003774	chr11	+	811	1	ISM	ENSMUSG00000042569.14	ENSMUST00000108718.2	3277	7	28706	0	28706	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTCTTTAATCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	60750210	60751021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60750200_60751000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003775	chr11	-	901	1	Genic_Genomic	ENSMUSG00000043284.13	novel	NA	NA	NA	NA	13688	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTCTTTTCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	60756176	60755275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_60755300_60756200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003776	chr11	-	1450	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	8	-1	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTCTCTTTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60770090	60755276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_60756175_60769538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003777	chr11	-	1381	2	NNC	ENSMUSG00000043284.13	novel	1457	2	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	60770028	60755277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_60756169_60769538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003778	chr11	-	1286	2	FSM	ENSMUSG00000042549.11	ENSMUST00000123544.2	1291	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGGGTATAAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	60822688	60811742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_60812732_60822391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003779	chr11	+	1085	5	ISM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	14687	279	14687	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACCCTGGGTGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	60837545	60843358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003780	chr11	+	868	3	NNC	ENSMUSG00000018932.10	novel	2198	12	NA	NA	17887	-364	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTCCCTTTGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	60840745	60843273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_60840884_60841983_60842030_60842589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003781	chr11	-	765	2	Antisense	novelGene_ENSMUSG00000018932.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAGGAAAGAGGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	60843313	60841985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_60842024_60842586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003782	chr11	+	818	1	Genic_Genomic	ENSMUSG00000018932.10	novel	NA	NA	NA	NA	19969	8	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCTTTCTTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	60842827	60843645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_60842800_60843600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003783	chr11	+	2367	3	FSM	ENSMUSG00000042529.15	ENSMUST00000041944.9	2459	3	88	4	88	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGAATCTGGCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	60956717	60961949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_60956804_60957491_60957777_60959953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003784	chr11	-	978	1	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	22293	0	22293	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	61043588	61042610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61042600_61043600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003785	chr11	-	984	2	ISM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	19726	1895	19726	-1895	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGATTCCTTGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	61046155	61044505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61045340_61046005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003786	chr11	-	1402	1	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	20931	0	20931	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGTGTTAATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	61137080	61135678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61135700_61137100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003787	chr11	-	1414	2	ISM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	18194	185	18194	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGCCCGTTATAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	61139817	61135863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61137148_61139687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003788	chr11	-	245	2	ISM	ENSMUSG00000001034.18	ENSMUST00000101085.9	3254	6	1196	2797	1196	-2797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATACTTCCTGTACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	61383896	61382434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61382513_61383729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003789	chr11	+	475	4	ISM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	3962	-1	3962	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCCTTCATTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	61399931	61403758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_61399995_61400295_61400359_61403197_61403266_61403477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003790	chr11	+	282	1	NIC	ENSMUSG00000001039.13	novel	817	7	NA	NA	7506	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCCTTCATTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	61403475	61403757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_61403500_61403800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003791	chr11	+	543	4	FSM	ENSMUSG00000004837.3	ENST00000573099.5	540	4	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACAAGACCAGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	61544114	61562684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_61544251_61551047_61551146_61555010_61555134_61562498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003792	chr11	-	289	2	ISM	ENSMUSG00000042371.13	ENST00000417251.6	1649	14	43629	867	43629	-867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGCATCTTCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	61567107	61564689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61564824_61566952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003793	chr11	-	314	2	ISM	ENSMUSG00000042371.13	ENST00000417251.6	1649	14	11910	31283	11910	-31283	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATGATCAGCCGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	61598826	61595105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61595213_61598619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003794	chr11	-	140	1	ISM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	32299	0	32273	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	61620615	61620475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61620500_61620600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003795	chr11	-	163	2	ISM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	30531	593	30531	-593	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACTGTGGACATCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	61622357	61621072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61621129_61622250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003796	chr11	-	195	2	ISM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	13071	15292	13071	-15292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGCTAGCTCTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	61639817	61635771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_61635887_61639737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003797	chr11	+	471	2	ISM	ENSMUSG00000042331.14	ENSMUST00000049836.14	6091	8	24120	23664	26	-20009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCCCAGAAAGTGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	61933793	62008888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_61933902_62008525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003798	chr11	+	932	2	ISM	ENSMUSG00000042331.14	ENSMUST00000201723.4	2690	6	-16	20053	16	-19602	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCAAGGGCTCCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	61967900	62009295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_61968063_62008525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003799	chr11	+	1012	3	ISM	ENSMUSG00000042331.14	ENSMUST00000201723.4	2690	6	41463	6618	41457	-6167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCGCAGACCAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	62009379	62022730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62010109_62019025_62019234_62022655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003800	chr11	+	448	3	ISM	ENSMUSG00000042331.14	ENSMUST00000202744.4	674	5	51168	5616	51130	-5603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCACACTTCTGTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	62019052	62023294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62019234_62022655_62022730_62023101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003801	chr11	+	2196	1	ISM	ENSMUSG00000042331.14	ENSMUST00000049836.14	6091	8	120683	0	62434	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGGATATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	62030356	62032552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62030400_62032600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003802	chr11	+	339	2	ISM	ENSMUSG00000042331.14	ENST00000678019.1	3129	12	162441	0	128286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCGAGAGGCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	62096208	62110331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62096327_62110110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003803	chr11	+	1114	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	100	631	100	-631	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAATGGCCCGTCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	62139909	62156648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_62140263_62155887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003804	chr11	+	886	1	ISM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	16584	0	16584	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCACTGGCTTCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	62156393	62157279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62156400_62157300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003805	chr11	-	730	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	2	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62172199	62158049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003806	chr11	-	223	2	FSM	ENSMUSG00000014243.6	ENST00000399277.6	209	2	-8	-6	-8	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGGTGGGGATAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	62172176	62164529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_62164659_62172082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003807	chr11	-	130	1	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	7509	6	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGGTGGGGATAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	62164659	62164529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_62164500_62164700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003808	chr11	-	191	2	NNC	ENSMUSG00000014243.6	novel	209	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCTAGAGGTGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	62172168	62164534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_62164659_62172101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003809	chr11	-	723	1	ISM	ENSMUSG00000018501.18	ENSMUST00000101066.10	8852	45	121095	272	42371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCAGATTTGTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	62208246	62207523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_62207500_62208200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003810	chr11	-	762	3	ISM	ENSMUSG00000018501.18	ENSMUST00000037575.15	4246	24	38689	-244	38689	244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATGTCTTTAAATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	62211928	62208378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_62208857_62210191_62210369_62211821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003811	chr11	-	155	2	ISM	ENSMUSG00000018501.18	ENST00000395848.5	2811	19	53761	16310	-24958	-16310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTCGATGACAAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	62275575	62274078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_62274202_62275543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003812	chr11	-	162	2	ISM	ENSMUSG00000018501.18	ENST00000395848.5	2811	19	40122	28248	-38597	6192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAGTGAGCATGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	62289214	62286016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_62286055_62289090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003813	chr11	-	368	2	FSM	ENSMUSG00000018501.18	ENST00000618784.1	360	2	-2	-6	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCCTCCCTGGTTACCG	NA	NA	NA	NA	NA	NA	NA	NA	62329338	62310413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_62310607_62329163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003814	chr11	-	198	1	NIC	ENSMUSG00000018501.18	novel	8852	45	NA	NA	18655	1	mono-exon	FALSE	NA	NA	NA	NA	NA	916	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCCCTCCCTGGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	62310612	62310414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_62310400_62310600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003815	chr11	-	351	2	NNC	ENSMUSG00000018501.18	novel	360	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCAAGCCCTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	62329334	62310419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_62310600_62329163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003816	chr11	+	750	6	FSM	ENSMUSG00000014245.9	ENST00000395844.8	745	6	0	-5	0	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCAAGAAGTCGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	62349304	62403870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62402963_62403098_62403729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003817	chr11	+	1517	1	Genic_Genomic	ENSMUSG00000014245.9	novel	NA	NA	NA	NA	54423	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTACATAAAGCAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	62403727	62405244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_62403700_62405200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003818	chr11	-	252	2	FSM	ENSMUSG00000087120.2	ENSMUST00000142533.2	294	2	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCCAGCAATTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	62441825	62440872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_62440986_62441686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003819	chr11	+	788	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	-5	-332	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATCTTTGCCGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	62441991	62443552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62442422_62443194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003820	chr11	+	1006	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	-3	496	-3	-341	multi-exon	FALSE	canonical	NA	NA	NA	NA	3415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGAGGCTGATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	62441993	62443543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_62442422_62442965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003821	chr11	+	755	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	4	-130	intron_retention	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCATCCCCCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	62442000	62443754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62442422_62443420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003822	chr11	+	786	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	5	-85	intron_retention	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTAGAAGATGGCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	62442001	62443799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62442422_62443433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003823	chr11	+	911	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	12	-413	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTGGAGCCCAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	62442008	62443471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62442414_62442965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003824	chr11	+	584	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	14	-61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGATTACAACATCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	62442010	62443823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62442422_62443650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003825	chr11	+	658	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	15	-431	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAAGACCATCACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	62442011	62443453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62442422_62443205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003826	chr11	+	877	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	19	-436	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTGGCAAGACCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	62442015	62443448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62442422_62442977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003827	chr11	+	531	2	NNC	ENSMUSG00000019505.8	novel	1499	2	NA	NA	45	-306	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGGCCGCACCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	62442041	62443578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62442428_62443433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003828	chr11	-	274	2	Antisense	novelGene_ENSMUSG00000019505.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGATGTTGTAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	62443889	62443388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_62443470_62443696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003829	chr11	+	267	2	NNC	ENSMUSG00000019505.8	novel	271	2	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCGGTCTGCATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	62443393	62443889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_62443486_62443714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003830	chr11	+	620	1	Genic_Genomic	ENSMUSG00000019505.8	novel	NA	NA	NA	NA	-5	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCACTTGTGAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	62443422	62444042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_62443400_62444000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003831	chr11	+	217	3	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	29	1160	29	-1160	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTTCAGCTTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	62493731	62494473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62493850_62494060_62494109_62494422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003832	chr11	+	165	3	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	357	339	357	-339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGTCTGTACAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	62494059	62495294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62494109_62494422_62494473_62495228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003833	chr11	+	200	3	ISM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	733	54	733	-54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACCACAGGATCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	62494435	62495579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62494473_62495228_62495293_62495480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003834	chr11	+	155	1	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	1776	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	62495478	62495633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_62495500_62495600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003835	chr11	-	1009	3	FSM	ENSMUSG00000046417.15	ENST00000409083.7	1007	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGCCAGGAAAGTACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	62539356	62496578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_62497073_62511259_62511389_62538970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003836	chr11	+	1001	2	FSM	ENSMUSG00000048497.12	ENSMUST00000129162.3	1828	2	9	818	9	300	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGACATGCTTTTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	62540283	62556362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_62540418_62555495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003837	chr11	+	919	1	ISM	ENSMUSG00000048497.12	ENSMUST00000129162.3	1828	2	15987	0	15987	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGTCTGTGTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	62556261	62557180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62556300_62557200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003838	chr11	-	669	3	FSM	ENSMUSG00000047342.18	ENST00000472486.5	669	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGGTACTTATCCGACAC	NA	NA	NA	NA	NA	NA	NA	NA	62675812	62671314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_62671786_62674497_62674588_62675704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003839	chr11	-	473	1	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	4025	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGGTACTTATCCGACAC	NA	NA	NA	NA	NA	NA	NA	NA	62671787	62671314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_62671300_62671800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003840	chr11	+	1539	5	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	0	19670	0	-15740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACGTAAGTGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	62737894	62748615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62738622_62741397_62741499_62743734_62744219_62746111_62746235_62748511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003841	chr11	+	473	4	ISM	ENSMUSG00000090173.9	ENST00000395906.8	2069	11	8159	10778	8159	-10778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATTTGCATTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	62746194	62753577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62746235_62748511_62748622_62750665_62750867_62753455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003842	chr11	+	483	4	ISM	ENSMUSG00000090173.9	ENST00000395906.8	2069	11	12675	4462	12675	-4462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCTGGAGGTGCTGACG	NA	NA	NA	NA	NA	NA	NA	NA	62750710	62759893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62750867_62753455_62753578_62758346_62758496_62759837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003843	chr11	+	1584	6	ISM	ENSMUSG00000090173.9	ENST00000308799.8	3420	12	15660	-9	15519	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGTTGTCCAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	62753554	62768294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62753578_62758346_62758496_62759837_62759981_62764196_62764356_62765767_62766033_62767449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003844	chr11	+	1418	4	ISM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	5619	-1	5619	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGTGTGGTCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	62775899	62786012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_62775992_62777014_62777147_62782767_62782897_62784947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003845	chr11	+	1070	1	Genic_Genomic	ENSMUSG00000014177.11	novel	NA	NA	NA	NA	14663	2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTGTGGTCCCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	62784943	62786013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_62784900_62786000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003846	chr11	+	1787	5	FSM	ENSMUSG00000018217.13	ENSMUST00000018361.10	1800	5	14	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTCTCTCCCGGGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	63022351	63050374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_63022481_63023950_63024071_63025246_63025347_63041944_63042086_63049077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003847	chr11	+	532	3	ISM	ENSMUSG00000018217.13	ENST00000675808.1	2076	5	61	25073	21	-24017	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACATCCGCCTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	63022358	63025293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_63022481_63023707_63024071_63025246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003848	chr11	+	684	4	FSM	ENSMUSG00000018217.13	ENSMUST00000108700.2	733	4	-193	242	193	-160	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTCGCCTACATCC	NA	NA	NA	NA	NA	NA	NA	NA	63023700	63049150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_63024071_63025246_63025347_63041944_63042086_63049077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003849	chr11	+	1387	2	FSM	ENSMUSG00000018217.13	ENST00000676161.1	1380	2	-1	-6	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTCACTTGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	63025245	63050363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_63025347_63049077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003850	chr11	+	1359	2	NIC	ENSMUSG00000018217.13	novel	1621	3	NA	NA	15	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGAGTAACTCACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	63025261	63050358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_63025340_63049077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003851	chr11	+	498	3	FSM	ENSMUSG00000018217.13	ENST00000676329.1	1621	3	36	1087	36	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCCACAGGGAGGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	63025282	63049286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_63025340_63041853_63042086_63049077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003852	chr11	+	1302	1	Genic_Genomic	ENSMUSG00000018217.13	novel	NA	NA	NA	NA	23827	2	mono-exon	FALSE	NA	NA	NA	NA	NA	651	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTCCCGGGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	63049073	63050375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_63049100_63050400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003853	chr11	-	1014	1	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	115826	0	115823	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCGTGTGTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	63854466	63853452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_63853500_63854500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003854	chr11	-	1103	2	ISM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	103098	924	103095	-924	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCTTCCTCTACCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	63867194	63854376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_63855355_63867069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003855	chr11	+	1031	2	NNC	ENSMUSG00000086359.2	novel	1072	4	NA	NA	-494	8438	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAGAGCAGAGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	63854557	63867304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_63855357_63867072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003856	chr11	-	257	1	NIC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	7705	4	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTTAAAATTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	63962584	63962327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_63962300_63962600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003857	chr11	-	346	2	ISM	ENSMUSG00000042148.9	ENST00000429152.6	598	3	5787	125	5787	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCTCGACACAGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	63964502	63962456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_63962663_63964362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003858	chr11	-	266	2	ISM	ENSMUSG00000042148.9	ENST00000429152.6	598	3	2	2030	2	-2030	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGAAGCCATCGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	63970287	63964361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_63964497_63970156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003859	chr11	+	463	5	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	10	19556	10	-19556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTTGACTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	64869939	64872500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003860	chr11	+	303	4	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	2512	15609	2512	-15609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTGGGCAAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	64872441	64876447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64872501_64873581_64873651_64874419_64874546_64876398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003861	chr11	+	307	4	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	4490	13750	4490	-13750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTCCTGGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	64874419	64878306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64874546_64876398_64876448_64878096_64878156_64878233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003862	chr11	+	284	3	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	8304	11780	8304	-11780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGACCAGTCCAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	64878233	64880276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64878307_64878857_64878971_64880178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003863	chr11	+	438	4	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	8925	8705	8925	-8705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGCAGCTCTGAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	64878854	64883351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64878971_64880178_64880275_64883046_64883186_64883264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003864	chr11	+	444	4	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	13114	5828	13114	-5828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATGTGTCTTAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	64883043	64886228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64883186_64883264_64883351_64885061_64885181_64886131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003865	chr11	+	358	3	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	15130	3223	15130	-3223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGCATGTGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	64885059	64888833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64885181_64886131_64886229_64888693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003866	chr11	+	388	4	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	16199	2613	16199	-2613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCATCATGTGTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	64886128	64889443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64886229_64888693_64888833_64889166_64889206_64889333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003867	chr11	+	349	3	NNC	ENSMUSG00000020549.15	novel	2612	24	NA	NA	16217	-2613	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCATCATGTGTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	64886146	64889443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_64886229_64888693_64888851_64889333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003868	chr11	+	479	5	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	18799	1787	18799	-1787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGAAGTGGGCCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	64888728	64890269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003869	chr11	+	370	4	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	19444	1466	19444	-1466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAACGCTGCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	64889373	64890590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64889444_64889962_64890063_64890143_64890265_64890511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003870	chr11	+	386	4	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	20086	796	20086	-796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGGTCTGTATGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	64890015	64891260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64890063_64890143_64890265_64890511_64890591_64891121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003871	chr11	+	468	3	ISM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	20574	0	20574	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGCCATCCTGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	64890503	64892056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_64890591_64891121_64891267_64891820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003872	chr11	+	389	2	NNC	ENSMUSG00000020549.15	novel	2468	24	NA	NA	21188	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGCCATCCTGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	64891117	64892056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_64891271_64891820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003873	chr11	+	240	1	NIC	ENSMUSG00000020549.15	novel	2771	25	NA	NA	21888	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCCATCCTGGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	64891817	64892057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_64891800_64892100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003874	chr11	-	1047	4	ISM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	152694	-1	152544	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGTGCAGAAGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	64900849	64893801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003875	chr11	-	867	1	ISM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	99188	0	99188	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTCTGGTTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	65579935	65579068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_65579100_65579900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003876	chr11	-	977	3	ISM	ENSMUSG00000033352.12	ENST00000415385.7	3703	12	94785	1697	94785	-1697	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATAGAAGGGTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	65584338	65580790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_65581631_65582553_65582600_65584247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003877	chr11	+	866	5	ISM	ENSMUSG00000018347.17	ENST00000454073.7	1672	6	18	5891	18	-5891	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGTATCATAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65705304	65713764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003878	chr11	+	1283	5	ISM	ENSMUSG00000018347.17	ENST00000454073.7	1672	6	1456	-1	1456	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCCAGGTACTACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65706742	65719656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_65706952_65707314_65707407_65712755_65712841_65713656_65713765_65718867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003879	chr11	+	1078	4	ISM	ENSMUSG00000018347.17	ENST00000580306.7	1675	6	2026	0	2026	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCCAGGTACTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65707312	65719655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_65707407_65712755_65712841_65713653_65713765_65718867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003880	chr11	+	903	2	NNC	ENSMUSG00000018347.17	novel	1675	6	NA	NA	8368	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCCAGGTACTACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65713654	65719656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_65713769_65718867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003881	chr11	+	868	2	NNC	ENSMUSG00000018347.17	novel	1672	6	NA	NA	8395	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCCCAGGTACTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65713681	65719655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_65713769_65718874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003882	chr11	+	791	1	NIC	ENSMUSG00000018347.17	novel	2270	7	NA	NA	13579	1	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCCAGGTACTACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65718865	65719656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_65718900_65719700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003883	chr11	+	264	1	ISM	ENSMUSG00000018347.17	ENSMUST00000018491.8	2302	8	21732	0	14515	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTGTAGCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	65719801	65720065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_65719800_65720100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003884	chr11	-	405	1	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	14125	0	14125	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	66929271	66928866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_66928900_66929300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003885	chr11	-	909	3	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	10703	0	10703	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	66932693	66928866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_66929272_66931044_66931162_66932306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003886	chr11	-	488	2	NNC	ENSMUSG00000020910.17	novel	1283	5	NA	NA	12265	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	66931131	66928866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_66929272_66931048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003887	chr11	-	533	2	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	791	3633	791	-3633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATCCTGAGACCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	66942605	66932499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_66932934_66942506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003888	chr11	+	633	5	FSM	ENSMUSG00000069844.13	ENST00000551045.1	631	5	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAGCCAGAGCCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	66944593	66954859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_66944692_66946556_66946755_66947344_66947434_66949152_66949273_66954731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003889	chr11	+	257	3	ISM	ENSMUSG00000069844.13	ENST00000577427.1	516	4	2	5720	2	-5638	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGTGTATTACAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	66946563	66949218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_66946662_66947340_66947434_66949152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003890	chr11	+	270	2	ISM	ENSMUSG00000069844.13	ENST00000577427.1	516	4	2589	55	2589	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCAGGATTGGCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	66949150	66954883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_66949269_66954731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003891	chr11	+	214	1	NIC	ENSMUSG00000069844.13	novel	2186	6	NA	NA	8165	2	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTAACATACAACATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	66954726	66954940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_66954700_66954900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003892	chr11	+	503	2	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	10923	11120	10923	-11042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGACGTCTACACGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	67102152	67104279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_67102411_67104034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003893	chr11	+	482	2	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	14333	9265	14333	-9187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAACATGATATAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	67105562	67106134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_67105654_67105743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003894	chr11	+	519	2	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	14511	8607	14511	-8529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGCTGTATCCTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	67105740	67106792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_67106134_67106666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003895	chr11	+	631	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	19490	3582	19490	-3504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAGGTGTGTAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	67110719	67111817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_67110845_67111227_67111537_67111620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003896	chr11	+	438	3	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	21765	-2	21765	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCGTCAGTCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	67112994	67115401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_67113078_67113196_67113293_67115142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003897	chr11	+	729	7	FSM	ENSMUSG00000033066.17	ENST00000396115.6	745	7	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGGGGCTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	67487405	67574331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_67487526_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67573460_67573560_67574163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003898	chr11	+	159	1	Genic_Genomic	ENSMUSG00000033066.17	novel	NA	NA	NA	NA	92270	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGCCATCCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	67579659	67579818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_67579700_67579800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003899	chr11	-	467	3	ISM	ENSMUSG00000020904.12	ENST00000576499.1	496	4	11380	-1	11380	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGCACAGAGAGAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	67844998	67840389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_67840523_67844306_67844440_67844797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003900	chr11	-	139	1	NIC	ENSMUSG00000020904.12	novel	2199	14	NA	NA	15850	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGCACAGAGAGAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	67840528	67840389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_67840400_67840500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003901	chr11	-	269	3	ISM	ENSMUSG00000020904.12	ENST00000576499.1	496	4	4	4007	4	-4007	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTCACTTCACAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	67856374	67844397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_67844440_67844797_67844998_67856347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003902	chr11	+	1496	3	FSM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	4	-3	4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGGGCCTTCTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	67857309	67865420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_67857344_67860597_67860698_67864058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003903	chr11	+	871	1	ISM	ENSMUSG00000020903.14	ENSMUST00000021286.11	1638	5	20268	0	20257	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGAGTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	67877562	67878433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_67877600_67878400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003904	chr11	+	1561	1	ISM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	239395	0	239108	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAACTGGTACTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	68096413	68097974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68096400_68098000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003905	chr11	+	820	3	ISM	ENSMUSG00000020901.14	ENST00000611902.4	2503	19	58331	8627	16674	-3438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCACCCTCACACCAC	NA	NA	NA	NA	NA	NA	NA	NA	68381297	68383638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68381473_68382772_68382857_68383077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003906	chr11	+	583	3	ISM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	17043	3602	17043	-3602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTCGGAGCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	68381666	68383474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68381769_68382772_68382857_68383077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003907	chr11	+	975	4	ISM	ENSMUSG00000020901.14	ENSMUST00000021283.8	4370	19	60278	3562	18601	-1963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGCCGCTGTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	68383224	68385113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68383778_68383901_68384065_68384367_68384494_68384980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003908	chr11	-	564	1	ISM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	30615	523	30521	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCCGGGACATGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	68713346	68712782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68712800_68713300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003909	chr11	-	725	3	ISM	ENSMUSG00000018736.15	ENST00000402554.7	1832	10	23017	161	22985	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTAGCCTCACCCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	68720882	68712943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68713492_68716995_68717031_68720740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003910	chr11	-	781	3	ISM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	19691	694	19597	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATGTGTCCCCTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	68724270	68712953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68713492_68720740_68720893_68724179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003911	chr11	-	454	4	FSM	ENSMUSG00000018736.15	ENST00000585098.5	454	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAGTGATACATACG	NA	NA	NA	NA	NA	NA	NA	NA	68743919	68713152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_68713272_68734715_68734801_68736152_68736251_68743767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003912	chr11	-	434	4	NNC	ENSMUSG00000018736.15	novel	454	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAGTGATACATACG	NA	NA	NA	NA	NA	NA	NA	NA	68743905	68713152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_68713272_68734721_68734801_68736152_68736251_68743767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003913	chr11	-	453	4	NNC	ENSMUSG00000018736.15	novel	454	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACAAGTGATACATACG	NA	NA	NA	NA	NA	NA	NA	NA	68743917	68713152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_68713279_68734721_68734801_68736152_68736251_68743767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003914	chr11	-	544	4	ISM	ENSMUSG00000018736.15	ENSMUST00000108672.2	1653	8	9137	6832	9137	-6832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTATTTTCTCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	68734730	68726975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68727150_68730696_68730834_68732845_68732995_68734646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003915	chr11	+	542	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	-7	-9	-7	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTGTTTTCCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	68792401	68795369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003916	chr11	+	494	3	ISM	ENSMUSG00000060938.15	ENSMUST00000101014.9	657	4	16	1192	-9	-1192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGTGTTTTTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	68792451	68794144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68792639_68793095_68793263_68794004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003917	chr11	+	603	4	FSM	ENSMUSG00000060938.15	ENSMUST00000167436.3	606	4	4	-1	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTGTGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	68792464	68795360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_68792584_68793095_68793269_68794004_68794146_68795190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003918	chr11	+	460	3	ISM	ENSMUSG00000060938.15	ENSMUST00000101014.9	657	4	659	-5	634	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGACTGCTTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	68793094	68795341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68793263_68794004_68794146_68795190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003919	chr11	-	352	3	ISM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	683	36	683	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGCAGAAATAAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	68863986	68863345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68863568_68863768_68863855_68863942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003920	chr11	-	263	3	ISM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	360	482	360	-482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCACCTTCAATCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	68864309	68863791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68863855_68863942_68864100_68864266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003921	chr11	-	282	2	ISM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	19	975	19	-975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGAAGCGGCTGCGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	68864650	68864284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68864384_68864467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003922	chr11	-	380	1	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	22384	0	22384	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	68876902	68876522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68876500_68876900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003923	chr11	-	619	2	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	19786	2266	19786	-2266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCGCATGACCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	68879500	68878788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68879100_68879192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003924	chr11	-	410	4	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	17042	4816	17042	-4816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAGGAAACAAGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	68882244	68881338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68881402_68881498_68881645_68881865_68881986_68882163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003925	chr11	-	415	2	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	16048	6158	16048	-6158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGATGAGGCCCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	68883238	68882680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68882863_68883005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003926	chr11	-	392	3	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	8320	11968	8320	-11968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGAGCCACCACCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	68890966	68888490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68888619_68888738_68888871_68890834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003927	chr11	-	412	3	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	5867	15408	5867	-15408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGAGTCTGTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	68893419	68891930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_68892123_68892558_68892665_68893305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003928	chr11	+	686	4	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	36	3299	36	-3299	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTGTCACCCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	68936513	68939191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003929	chr11	+	509	4	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	2132	3016	2132	-3016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTACCTGGTGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	68938609	68939474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68938714_68938797_68938868_68938999_68939192_68939331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003930	chr11	+	628	4	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	2530	1207	2530	-1207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGTCGGATTGTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	68939007	68941283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68939192_68939331_68939471_68939556_68939706_68941127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003931	chr11	+	1021	4	ISM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	2856	205	2856	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCCATGCACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	68939333	68942285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68939471_68939556_68939706_68941127_68941303_68941725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003932	chr11	+	611	1	Genic_Genomic	ENSMUSG00000020897.13	novel	NA	NA	NA	NA	5404	2	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGGTCTGAATATGC	NA	NA	NA	NA	NA	NA	NA	NA	68941881	68942492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_68941900_68942500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003933	chr11	+	253	1	FSM	ENSMUSG00000045176.4	ENSMUST00000051888.4	1862	1	1609	0	1609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGCCTGTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	68952151	68952404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_68952200_68952400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003934	chr11	+	1259	4	FSM	ENSMUSG00000020895.15	ENSMUST00000094081.5	1263	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAAATAGATATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	68961640	68964119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003935	chr11	+	651	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	133	-5	128	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTATACTATTTTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	68961764	68963861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003936	chr11	+	288	1	NIC	ENSMUSG00000020895.15	novel	779	5	NA	NA	1932	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	68963568	68963856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_68963600_68963900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003937	chr11	+	778	4	ISM	ENSMUSG00000020894.17	ENST00000488857.5	843	5	6	681	6	-670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCGGTGAGTGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	68979405	68980846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68979859_68979931_68980053_68980556_68980716_68980801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003938	chr11	+	911	1	ISM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	2984	0	2900	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	68982299	68983210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_68982300_68983200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003939	chr11	+	750	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGAGTGTGAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	69214807	69216620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003940	chr11	+	562	3	NNC	ENSMUSG00000049299.15	novel	759	4	NA	NA	236	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	69215218	69216619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_69215292_69215649_69215784_69216264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003941	chr11	+	439	2	NNC	ENSMUSG00000049299.15	novel	759	4	NA	NA	727	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGAGTGTGAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	69215709	69216620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_69215793_69216264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003942	chr11	+	356	1	NIC	ENSMUSG00000049299.15	novel	751	5	NA	NA	1281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	69216263	69216619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_69216300_69216600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003943	chr11	+	2039	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	44	-2	44	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAGACTGTTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	69231330	69233469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69231885_69231984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003944	chr11	-	541	1	NIC	ENSMUSG00000044795.13	novel	1034	4	NA	NA	1530	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGGAAATTAGCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	69284629	69284088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_69284100_69284600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003945	chr11	+	381	2	ISM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	130	319	-24	-313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTCCAGGGAATACAC	NA	NA	NA	NA	NA	NA	NA	NA	69286602	69287187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69286799_69287002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003946	chr11	+	346	2	FSM	ENSMUSG00000059278.10	ENST00000333775.9	715	2	375	-6	375	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	69287001	69287506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69287187_69287345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003947	chr11	+	166	1	NIC	ENSMUSG00000059278.10	novel	671	3	NA	NA	714	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	69287340	69287506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_69287300_69287500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003948	chr11	-	329	3	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	12603	1708	12603	-1703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACTGCAACGAATGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	69291898	69291041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69291149_69291532_69291675_69291818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003949	chr11	-	1478	2	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	8319	5282	8319	-5277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTATGCTGTCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	69296182	69294615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69294743_69294831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003950	chr11	-	319	2	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	6833	7929	6833	-7924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCAGAGTTCAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	69297668	69297262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69297436_69297522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003951	chr11	-	831	5	ISM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	15888	14	15888	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGTCACACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	69454262	69452598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003952	chr11	-	836	5	ISM	ENSMUSG00000041346.12	ENST00000431639.6	1761	11	3	2086	3	-2086	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGTAATGACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	69472425	69454684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69454774_69468451_69468564_69469272_69469372_69469495_69469880_69472273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003953	chr11	-	438	2	ISM	ENSMUSG00000041346.12	ENST00000457584.6	1717	11	57	16897	57	-16897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACACTGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	69471171	69469495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69469880_69471117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003954	chr11	+	229	2	ISM	ENSMUSG00000059552.14	ENSMUST00000171247.8	1867	11	11	4899	11	-4459	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGATCTTTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	69471195	69477799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69471342_69477716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003955	chr11	+	367	3	ISM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	6485	4241	-1455	-3800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGCCCCGGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	69477715	69478458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69477800_69478082_69478105_69478197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003956	chr11	+	468	3	ISM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	6852	3325	-1088	-2884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCCTCAACACCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	69478082	69479374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69478105_69478197_69478459_69479189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003957	chr11	+	357	3	ISM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	7169	3134	-771	-2693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTAATTTTGTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	69478399	69479565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69478459_69479189_69479374_69479451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003958	chr11	+	1051	7	FSM	ENSMUSG00000059552.14	ENST00000504290.5	873	7	20	-198	20	198	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTCTATCCAGCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	69479190	69482456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480705_69481451_69481589_69482175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003959	chr11	+	851	7	NNC	ENSMUSG00000059552.14	novel	873	7	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGCATCCCGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	69479196	69482258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_69479374_69479451_69479569_69479966_69480077_69480398_69480536_69480614_69480705_69481451_69481589_69482175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003960	chr11	+	310	3	ISM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	9166	1121	1226	-680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTCCAGGTAAGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	69480396	69481578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69480536_69480614_69480689_69481481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003961	chr11	+	343	3	ISM	ENSMUSG00000059552.14	ENSMUST00000108658.10	1771	11	9428	363	1442	77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCGGTCCCTTCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	69480612	69482335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69480689_69481481_69481589_69482175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003962	chr11	+	343	1	Genic_Genomic	ENSMUSG00000059552.14	novel	NA	NA	NA	NA	3190	4	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGAGAGGTTGATATCA	NA	NA	NA	NA	NA	NA	NA	NA	69482360	69482703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_69482400_69482700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003963	chr11	-	636	4	ISM	ENSMUSG00000005202.3	ENST00000441599.6	794	6	486	-3	251	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAACGATACCCGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	69508160	69505821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69505943_69507162_69507323_69507517_69507680_69507967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003964	chr11	-	403	3	FSM	ENSMUSG00000005202.3	ENST00000572182.5	400	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCAACGATACCCGCACC	NA	NA	NA	NA	NA	NA	NA	NA	69508412	69505822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_69505943_69507967_69508158_69508319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003965	chr11	-	302	2	NNC	ENSMUSG00000005202.3	novel	400	3	NA	NA	254	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAACGATACCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69508157	69505823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_69505936_69507967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003966	chr11	-	306	2	NNC	ENSMUSG00000005202.3	novel	400	3	NA	NA	254	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAACGATACCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69508157	69505823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_69505940_69507967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003967	chr11	-	611	4	ISM	ENSMUSG00000005202.3	ENST00000576728.5	697	5	249	-1	249	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAACGATACCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69508162	69505823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69505943_69506857_69506995_69507162_69507323_69507967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003968	chr11	-	773	5	ISM	ENSMUSG00000005202.3	ENST00000574539.5	859	6	249	-1	249	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCAACGATACCCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	69508162	69505823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69505943_69506857_69506995_69507162_69507323_69507517_69507680_69507967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003969	chr11	-	745	5	ISM	ENSMUSG00000005202.3	ENST00000574539.5	859	6	-3	1032	-3	-1032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGGACAGGGTCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	69508414	69506856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69506995_69507162_69507323_69507517_69507680_69507967_69508158_69508319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003970	chr11	-	558	4	ISM	ENSMUSG00000005202.3	ENST00000576728.5	697	5	-1	1055	-1	-1055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTCACCTCCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	69508412	69506879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69506995_69507162_69507323_69507967_69508158_69508319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003971	chr11	-	461	4	ISM	ENSMUSG00000005202.3	ENST00000441599.6	794	6	9	1739	9	-1739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTAGGGGGGCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	69508637	69507563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69507680_69507967_69508158_69508319_69508412_69508574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003972	chr11	-	118	1	FSM	ENSMUSG00000080573.3	ENSMUST00000116923.3	120	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACATTTTGATGTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	69526343	69526225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_69526200_69526300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003973	chr11	+	750	2	FSM	ENSMUSG00000041287.6	ENST00000250055.3	745	2	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGACGCCCAGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	69546150	69547449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69546730_69547278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003974	chr11	+	733	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	24	104	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGACGCCCAGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	69546163	69547449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69546726_69547278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003975	chr11	-	637	1	Genic_Genomic	ENSMUSG00000018761.15	novel	NA	NA	NA	NA	5310	1	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTAGTGTGCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	69548158	69547521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_69547500_69548200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003976	chr11	-	864	3	ISM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	4797	0	4797	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	69548671	69547522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69548155_69548245_69548357_69548550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003977	chr11	-	690	1	Genic_Genomic	ENSMUSG00000059796.17	novel	NA	NA	NA	NA	4693	1	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGCTTCTTGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	69558450	69557760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_69557800_69558400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003978	chr11	-	753	2	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	4534	18	4534	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTGGAAACTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	69558609	69557779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69558444_69558520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003979	chr11	-	938	5	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	3846	119	3846	-119	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGTGAGGGGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	69559297	69557880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003980	chr11	-	653	3	NNC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	4228	-172	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGACCAAATCTACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	69558915	69557933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_69558444_69558520_69558596_69558847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003981	chr11	-	647	5	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	2099	1260	2099	-1260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTTAATGGCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	69561044	69559021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003982	chr11	-	699	5	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	1568	1468	1568	-1468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCCAGTGCAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	69561575	69559229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003983	chr11	-	894	1	NIC	ENSMUSG00000018752.20	novel	2235	13	NA	NA	8715	-2970	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTGGTCCTCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	69577920	69577026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_69577000_69577900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003984	chr11	-	960	2	ISM	ENSMUSG00000097328.8	ENSMUST00000181810.8	1435	7	8478	2	8478	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAAAGGTACCAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69578197	69577077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69577918_69578077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003985	chr11	-	646	1	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	11262	0	11262	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTGTCTATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	69675507	69674861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69674900_69675500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003986	chr11	-	895	3	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	10079	137	10079	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCCCAGCAATGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	69676690	69674998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69675588_69675875_69676024_69676532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003987	chr11	-	652	4	ISM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	3138	1014	3138	-1014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCCAAAGAGTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	69683631	69675875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69676024_69676532_69676706_69677706_69677931_69683524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003988	chr11	-	869	5	FSM	ENSMUSG00000042826.14	ENST00000575235.5	929	5	60	0	60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAGATCCTGGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	69693693	69688833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_69689099_69689389_69689589_69690177_69690282_69690491_69690603_69693503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003989	chr11	+	487	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	69729354	69730444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003990	chr11	+	456	3	NNC	ENSMUSG00000070394.11	novel	492	4	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	69729363	69730444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_69729486_69730013_69730095_69730191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003991	chr11	+	332	2	NNC	ENSMUSG00000070394.11	novel	492	4	NA	NA	662	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	69730011	69730444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_69730095_69730195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003992	chr11	+	1942	3	ISM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	1638	56	1579	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACAAGGGACCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	69739080	69742828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69739202_69740837_69741000_69741169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003993	chr11	+	1665	1	ISM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	3777	0	3718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTGATTATGTGAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	69741219	69742884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69741200_69742900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003994	chr11	-	688	3	ISM	ENSMUSG00000018570.18	ENSMUST00000108621.9	1455	8	74	2158	74	-2153	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCCCTCTCAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	69791638	69790341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69790415_69790531_69790637_69791128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003995	chr11	+	269	2	ISM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	83	1730	83	-1715	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGCCTCTCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	69805100	69805687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69805260_69805577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003996	chr11	+	206	2	ISM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	577	1546	577	-1531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGATGAGATGGCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69805594	69805871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69805688_69805758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003997	chr11	+	249	3	ISM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	738	1231	738	-1216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGATGTTTGGACCACA	NA	NA	NA	NA	NA	NA	NA	NA	69805755	69806186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69805872_69805964_69806045_69806133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003998	chr11	+	224	2	ISM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	1115	821	1115	-806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGCTCAGAGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	69806132	69806596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69806217_69806456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000003999	chr11	+	329	3	ISM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	1434	479	1434	-464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATGGAGTCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	69806451	69806938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69806611_69806690_69806781_69806858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004000	chr11	+	264	3	ISM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	1671	302	1671	-287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAAGGCTGGCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	69806688	69807115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69806781_69806858_69806939_69807023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004001	chr11	+	268	2	ISM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	2006	0	2006	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69807023	69807417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69807120_69807245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004002	chr11	+	175	1	NIC	ENSMUSG00000023170.15	novel	1220	10	NA	NA	2225	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69807242	69807417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_69807200_69807400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004003	chr11	-	486	1	Genic_Genomic	ENSMUSG00000078812.11	novel	NA	NA	NA	NA	1107	2	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTGTTTATTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	69808023	69807537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_69807500_69808000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004004	chr11	-	842	3	ISM	ENSMUSG00000078812.11	ENSMUST00000108610.8	1409	6	2889	-1	563	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAACTCAGTTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	69808567	69807544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69808168_69808253_69808328_69808422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004005	chr11	-	1343	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAACTCAGTTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	69812211	69807544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004006	chr11	-	825	3	NNC	ENSMUSG00000078812.11	novel	1409	6	NA	NA	572	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69808558	69807545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_69808168_69808253_69808321_69808422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004007	chr11	-	673	4	ISM	ENSMUSG00000078812.11	ENST00000572815.5	819	5	38	194	38	-194	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCATGACAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	69812132	69808316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69808555_69808742_69808848_69809976_69810163_69811988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004008	chr11	-	346	3	ISM	ENSMUSG00000078812.11	ENSMUST00000043419.10	1437	7	115	2474	73	-1897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGATGTCTACTTCGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	69812097	69810019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_69810163_69811166_69811261_69811988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004009	chr11	+	687	5	ISM	ENSMUSG00000018554.14	ENST00000557561.2	985	8	3189	0	2906	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCAACTCAGAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	69830058	69831920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69830154_69830699_69830985_69831153_69831249_69831430_69831594_69831871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004010	chr11	+	637	4	NNC	ENSMUSG00000018554.14	novel	985	8	NA	NA	2906	-327	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGTCTTGGTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69830058	69831593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_69830160_69830706_69830985_69831153_69831249_69831430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004011	chr11	-	1453	9	FSM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	69872077	69859049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039_69871389_69872032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004012	chr11	+	278	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	10	5029	10	-5029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTATGGAACGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	69872319	69875365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69872412_69875079_69875147_69875246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004013	chr11	+	271	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	2769	4746	2769	-4746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGCGGCTCCGACTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	69875078	69875648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69875147_69875246_69875361_69875559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004014	chr11	+	309	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	2931	839	2931	-839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGCCAGAGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	69875240	69879555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69875361_69875559_69875632_69879438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004015	chr11	+	304	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	3248	628	3248	-628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAAAGTTCTGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	69875557	69879766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69875632_69879438_69879556_69879653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004016	chr11	+	288	3	ISM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	7160	-3	7160	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGTGGCCTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	69879469	69880397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69879556_69879653_69879766_69880307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004017	chr11	+	1348	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	69881971	69885777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004018	chr11	+	270	2	ISM	ENSMUSG00000018567.15	ENST00000571253.1	838	3	477	1849	477	-1849	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACGATGGGTCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	69883093	69883501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69883270_69883407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004019	chr11	+	234	2	ISM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	-24	2381	-24	-2137	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTGTCCCATACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	69886677	69888454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69886880_69888422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004020	chr11	+	1699	3	ISM	ENSMUSG00000018572.11	ENSMUST00000135814.2	2214	4	635	-3	635	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	69888569	69890835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69888665_69889126_69889959_69890063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004021	chr11	+	219	1	ISM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	4014	0	2682	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	69890616	69890835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_69890600_69890800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004022	chr11	+	869	3	ISM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	6132	0	6037	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTAGCTCCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	70027286	70028376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70027419_70027495_70027603_70027746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004023	chr11	+	388	2	ISM	ENSMUSG00000040950.14	ENSMUST00000165951.8	1635	9	6064	596	6064	-596	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACATATGCTAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70027313	70027778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70027419_70027495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004024	chr11	+	637	1	Genic_Genomic	ENSMUSG00000040950.14	novel	NA	NA	NA	NA	6491	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTAGCTCCATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70027740	70028377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_70027700_70028400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004025	chr11	+	1790	6	ISM	ENSMUSG00000040938.17	ENSMUST00000126388.8	1938	7	1043	0	-115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTTGAGAGTTCCATTA	NA	NA	NA	NA	NA	NA	NA	NA	70104620	70107239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70104704_70104919_70105091_70105191_70105539_70105780_70105925_70106109_70106878_70106962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004026	chr11	+	1434	4	ISM	ENSMUSG00000040938.17	ENSMUST00000171032.8	1754	5	45	360	45	-360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGCTGAGCTCGCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	70104780	70106878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70105091_70105327_70105539_70105780_70105925_70106109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004027	chr11	+	1773	4	FSM	ENSMUSG00000040938.17	ENSMUST00000094055.10	1788	4	15	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGAGAGTTCCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	70104955	70107240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_70105539_70105780_70105925_70106109_70106878_70106962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004028	chr11	-	568	3	ISM	ENSMUSG00000020831.19	ENSMUST00000100950.10	545	4	686	-157	686	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCTGCCAGCTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	70127818	70126030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70126295_70126849_70127038_70127702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004029	chr11	-	419	2	ISM	ENSMUSG00000020831.19	ENSMUST00000108577.8	659	4	1719	-2	1495	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70127009	70126031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70126291_70126849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004030	chr11	-	847	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	33	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70128707	70126031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004031	chr11	-	582	3	ISM	ENSMUSG00000020831.19	ENSMUST00000108575.9	643	4	219	0	44	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70128460	70126031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70126295_70126822_70127038_70128356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004032	chr11	-	264	1	NIC	ENSMUSG00000020831.19	novel	643	4	NA	NA	2209	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	70126295	70126031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_70126000_70126300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004033	chr11	-	479	4	FSM	ENSMUSG00000020831.19	ENSMUST00000100950.10	545	4	51	15	51	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGACCTGTGGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	70128453	70126202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004034	chr11	-	333	3	ISM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	277	215	51	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTCTCCTGCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	70128453	70126246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70126295_70126849_70127038_70128356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004035	chr11	-	334	3	ISM	ENSMUSG00000020831.19	ENSMUST00000108575.9	643	4	-17	854	-17	-656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGGGGTTCCTCCCATA	NA	NA	NA	NA	NA	NA	NA	NA	70128696	70126885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70127038_70128356_70128452_70128609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004036	chr11	-	613	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCTGTGCTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70130669	70128948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_70129297_70129763_70129841_70130481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004037	chr11	-	566	3	NNC	ENSMUSG00000093989.2	novel	611	3	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGTCTGTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	70130627	70128949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_70129297_70129763_70129841_70130485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004038	chr11	-	462	2	FSM	ENSMUSG00000093989.2	ENSMUST00000141880.2	465	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTGCTGTCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	70129881	70128952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_70129297_70129763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004039	chr11	-	1175	2	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	15217	-1	15217	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGACCCTGTGCTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70285625	70283711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70283849_70284587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004040	chr11	-	1146	2	NNC	ENSMUSG00000018921.12	novel	3415	17	NA	NA	15242	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGACCCTGTGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70285600	70283712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_70283846_70284587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004041	chr11	-	1359	3	ISM	ENSMUSG00000018921.12	ENST00000436683.6	3375	18	14910	0	14822	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGACCCTGTGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70286020	70283712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70283849_70284587_70284777_70284986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004042	chr11	-	1405	3	ISM	ENSMUSG00000018921.12	ENST00000436683.6	3375	18	14592	902	14504	-902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAAGTTCCAGCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	70286338	70284614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70284777_70284986_70286019_70286127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004043	chr11	-	1824	7	ISM	ENSMUSG00000018921.12	ENST00000572293.7	3415	17	12913	1255	12913	-1255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGGTGGAAGAAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70287929	70284967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70286019_70286127_70286335_70286485_70286542_70287111_70287264_70287377_70287530_70287643_70287761_70287840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004044	chr11	+	903	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGAGTCTCTCTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	70342744	70344554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_70342890_70343033_70343165_70343927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004045	chr11	+	459	2	FSM	ENSMUSG00000018923.14	ENST00000674339.1	457	2	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACCCTGCCCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	70342802	70344299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_70342890_70343927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004046	chr11	+	471	3	FSM	ENSMUSG00000018923.14	ENST00000575284.5	468	3	-1	-2	-1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCGGATGATCCAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70342803	70344065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_70342890_70343033_70343165_70343811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004047	chr11	+	461	3	NNC	ENSMUSG00000018923.14	novel	468	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCGGATGATCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	70342804	70344063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_70342890_70343033_70343165_70343818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004048	chr11	+	375	1	NIC	ENSMUSG00000018923.14	novel	902	3	NA	NA	1121	1	mono-exon	FALSE	NA	NA	NA	NA	NA	666	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACCCTGCCCTGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	70343925	70344300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_70343900_70344300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004049	chr11	-	1248	1	ISM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	4754	0	4754	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGACTTCTGCAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	70346056	70344808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70344800_70346100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004050	chr11	-	1302	2	ISM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	4106	384	4106	-384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCAAGGTACAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70346704	70345192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70346271_70346480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004051	chr11	+	442	4	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	0	974	0	-974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCCTCCTCACCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	70416211	70417501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004052	chr11	+	477	4	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	498	325	498	-325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTCTGTGCTTCCACG	NA	NA	NA	NA	NA	NA	NA	NA	70416709	70418150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70416779_70417119_70417252_70417369_70417500_70418004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004053	chr11	+	633	4	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	899	-4	899	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTGTGTGAAGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	70417110	70418479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70417252_70417369_70417500_70418004_70418150_70418262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004054	chr11	+	346	2	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	1784	21	1784	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATAAACAGTTTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	70417995	70418454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70418150_70418262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004055	chr11	-	259	2	Antisense	novelGene_ENSMUSG00000018286.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAACATAGCCATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	70418475	70418096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_70418141_70418260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004056	chr11	+	219	1	Genic_Genomic	ENSMUSG00000018286.7	novel	NA	NA	NA	NA	2047	2	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTTCTGTGTGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	70418258	70418477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_70418300_70418500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004057	chr11	+	1546	2	FSM	ENSMUSG00000050675.8	ENST00000611961.1	1883	2	337	0	337	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAGTGGAGATCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	70530572	70532440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_70531583_70531904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004058	chr11	-	1268	6	ISM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	1067	0	980	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	70536817	70535021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004059	chr11	-	157	1	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	2049	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCATGGTCCCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	70535748	70535591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_70535600_70535700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004060	chr11	-	451	3	ISM	ENSMUSG00000014606.15	ENST00000544061.6	901	7	1	814	1	-814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCTAGTTAGGATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	70537796	70536405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70536447_70536609_70536817_70537593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004061	chr11	+	880	6	ISM	ENSMUSG00000040746.16	ENST00000572430.5	1366	10	2006	0	2006	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGAAGCCATAGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	70540275	70542172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004062	chr11	-	880	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	-11	-8	-11	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGTTTGCACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	70545481	70542667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_70543048_70543612_70543806_70545174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004063	chr11	-	859	3	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTGGTTTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	70545470	70542671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_70543042_70543612_70543806_70545174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004064	chr11	-	874	3	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACCTGTGTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70545469	70542675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_70543048_70543612_70543806_70545160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004065	chr11	-	852	3	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACCTGTGTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70545470	70542675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_70543048_70543612_70543797_70545174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004066	chr11	-	859	3	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACCTGTGTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70545472	70542675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_70543048_70543612_70543802_70545174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004067	chr11	+	266	3	ISM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	52	4063	52	-4056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGGAGGAGCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	70548673	70549273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70548785_70548990_70549087_70549214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004068	chr11	+	232	3	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	368	-3837	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGGTGCCAGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	70548989	70549492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_70549087_70549214_70549278_70549420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004069	chr11	+	248	3	NNC	ENSMUSG00000060600.16	novel	1461	11	NA	NA	613	-3341	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGGCTGTGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	70549234	70549988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_70549278_70549420_70549491_70549853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004070	chr11	+	302	2	ISM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	1232	1683	1232	-1676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACGTGGGGGATGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	70549853	70551653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70549988_70551485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004071	chr11	+	735	4	ISM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	2864	437	2864	-430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGGTTTCTCTCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	70551485	70552899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70551709_70551822_70552021_70552214_70552417_70552787
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004072	chr11	-	246	2	Antisense	novelGene_ENSMUSG00000060600.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTGACTTGAAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	70552394	70551949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_70552013_70552211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004073	chr11	+	211	2	ISM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	4415	-1	4415	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGCTGTGTTCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	70553036	70553337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70553099_70553188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004074	chr11	+	153	1	NIC	ENSMUSG00000060600.16	novel	1454	12	NA	NA	4563	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGCTGTGTTCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	70553184	70553337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_70553200_70553300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004075	chr11	-	519	1	Genic_Genomic	ENSMUSG00000018287.13	novel	NA	NA	NA	NA	4983	5	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGATACTAGTCCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	70555110	70554591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_70554600_70555100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004076	chr11	-	493	3	ISM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	4745	208	4596	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAAGTGTTTATCACT	NA	NA	NA	NA	NA	NA	NA	NA	70555497	70554804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70555047_70555145_70555303_70555403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004077	chr11	-	694	4	ISM	ENSMUSG00000018287.13	ENST00000575142.5	1091	6	4190	259	4190	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGGACCCATTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	70555903	70554873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70555303_70555403_70555494_70555608_70555694_70555813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004078	chr11	-	249	3	ISM	ENSMUSG00000018287.13	ENST00000575142.5	1091	6	3897	993	3897	-993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCCTGCCGCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70556196	70555607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70555694_70555813_70555903_70556122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004079	chr11	-	371	3	ISM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	6	1217	6	-1199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTCTGGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70560236	70555813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70555903_70556122_70556191_70560022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004080	chr11	-	470	1	ISM	ENSMUSG00000040712.17	ENSMUST00000108545.9	4377	21	18009	2	17997	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCCTCCGGCCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	70560760	70560290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70560300_70560800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004081	chr11	-	724	3	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	17193	338	17193	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGGGTGACTGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	70561564	70560629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70561089_70561171_70561247_70561374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004082	chr11	-	468	3	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	16295	1082	16295	-1082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACCACCCCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70562462	70561373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70561563_70561813_70561906_70562275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004083	chr11	-	499	2	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	13675	2419	13675	-2419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGACCAGCTCACCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	70565082	70562710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70562907_70564779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004084	chr11	-	528	2	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	13096	4486	13096	-4486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTCTGTTGATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	70565661	70564777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70565082_70565437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004085	chr11	-	681	3	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	6665	8841	6665	-8841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGACTGGTTGTCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	70572092	70569132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70569245_70570352_70570480_70571650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004086	chr11	-	613	3	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	4938	11925	4938	-11925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGGTTCTGAGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	70573819	70572216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70572595_70573286_70573422_70573719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004087	chr11	-	447	4	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	3757	13428	3757	-13428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAACAAGCAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	70575000	70573719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70573874_70574104_70574192_70574715_70574852_70574930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004088	chr11	+	2061	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCTGGCCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	70655034	70663754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_70655376_70662034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004089	chr11	-	173	2	FSM	ENSMUSG00000057135.13	ENST00000571800.5	164	2	-4	-5	-4	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGAGGGGAGACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70691639	70688832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_70688899_70691532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004090	chr11	-	173	2	NIC	ENSMUSG00000057135.13	novel	164	2	NA	NA	-1	4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGAGGGGAGACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	70691636	70688833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_70688903_70691532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004091	chr11	-	161	2	NNC	ENSMUSG00000057135.13	novel	164	2	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGGGAGGGGAGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	70691635	70688834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_70688903_70691542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004092	chr11	-	146	2	NNC	ENSMUSG00000057135.13	novel	164	2	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGAGGGAGGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	70691621	70688837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_70688903_70691540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004093	chr11	+	1254	5	FSM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	10	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCCCTCCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	70735627	70784947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004094	chr11	+	1283	2	ISM	ENSMUSG00000020817.17	ENSMUST00000177731.8	3167	19	95046	-698	94996	340	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAGTTTCAAAGTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70830796	70832464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70830823_70831207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004095	chr11	+	1245	1	ISM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	97083	0	96886	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAATAAATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	70832686	70833931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70832700_70833900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004096	chr11	-	1176	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTCGCCCACATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	70873852	70868660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004097	chr11	-	410	1	NIC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	4781	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTTTCGCCCACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	70869071	70868661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_70868700_70869100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004098	chr11	-	355	1	Genic_Genomic	ENSMUSG00000018442.14	novel	NA	NA	NA	NA	11452	6	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTATTTTTAATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	70898616	70898261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_70898300_70898600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004099	chr11	-	297	2	ISM	ENSMUSG00000018442.14	ENSMUST00000171041.8	1466	7	6203	3167	5604	-3167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTGTTCCATGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	70904464	70903925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70904027_70904268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004100	chr11	-	358	3	ISM	ENSMUSG00000018442.14	ENSMUST00000171041.8	1466	7	4041	3516	3442	-3516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTAAGTGTCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	70906626	70904274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_70904465_70905375_70905470_70906552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004101	chr11	+	2755	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	116	132	116	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTCAGGTCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	70910552	70918065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_70911016_70915375_70915538_70915935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004102	chr11	+	2175	1	ISM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	5586	0	5586	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	70916022	70918197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_70916000_70918200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004103	chr11	+	954	4	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	0	17673	0	-17672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAACAATTATTAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	71650561	71662801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_71651093_71657614_71657730_71659454_71659640_71662678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004104	chr11	+	783	6	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	7051	1897	7051	-1896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCACCATCTGTGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71657612	71678577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004105	chr11	+	1007	4	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	23515	506	23515	-505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTTGAAGGGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	71674076	71679968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_71674244_71675094_71675260_71678543_71678745_71679494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004106	chr11	+	1211	4	ISM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	24626	-2	24626	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTCTGCCTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	71675187	71680476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_71675260_71678543_71678745_71679494_71679969_71680012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004107	chr11	-	706	4	FSM	ENSMUSG00000040554.11	ENST00000250087.9	703	4	-3	0	-3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCTGGATTCCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	71927620	71920078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_71920283_71921032_71921175_71921251_71921429_71927437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004108	chr11	-	669	4	FSM	ENSMUSG00000040554.11	ENST00000571740.5	668	4	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCAGGGGTGAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	71927616	71921026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_71921175_71921251_71921405_71922242_71922432_71927437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004109	chr11	+	736	4	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	43	-1579	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGCATCTTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	71933323	71936600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_71933361_71933842_71934164_71935806_71936089_71936504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004110	chr11	+	1443	5	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	-31	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	71933836	71938196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_71934164_71935806_71936089_71936504_71936601_71937165_71937220_71937512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004111	chr11	+	1440	4	NNC	ENSMUSG00000020808.4	novel	1433	4	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTTCCATGCTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	71933867	71938182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_71934260_71935806_71936089_71936504_71936601_71937512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004112	chr11	-	759	2	Antisense	novelGene_ENSMUSG00000020808.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAAGGAGATGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	71938180	71936501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_71936591_71937510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004113	chr11	+	694	1	Genic_Genomic	ENSMUSG00000020808.4	novel	NA	NA	NA	NA	3636	1	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTTTTTAGATATCTA	NA	NA	NA	NA	NA	NA	NA	NA	71937503	71938197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_71937500_71938200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004114	chr11	+	975	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	7	-1	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTCAGGCAGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72098379	72100842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004115	chr11	+	603	1	Genic_Genomic	ENSMUSG00000020803.4	novel	NA	NA	NA	NA	1867	1	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTCAGGCAGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72100239	72100842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_72100200_72100800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004116	chr11	-	369	1	Genic_Genomic	ENSMUSG00000020801.9	novel	NA	NA	NA	NA	2139	5	mono-exon	FALSE	NA	NA	NA	NA	NA	424	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTCTCTGGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	72102904	72102535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_72102500_72102900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004117	chr11	-	451	2	FSM	ENSMUSG00000020801.9	ENST00000575197.1	443	2	-7	-1	-7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTTTGATTTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	72105050	72102539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_72102904_72104963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004118	chr11	-	427	2	NNC	ENSMUSG00000020801.9	novel	443	2	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACTTTGATTTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72105037	72102540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_72102894_72104963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004119	chr11	-	440	2	NNC	ENSMUSG00000020801.9	novel	443	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACTTTGATTTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72105041	72102540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_72102894_72104954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004120	chr11	-	396	2	NNC	ENSMUSG00000020801.9	novel	443	2	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACTTTGATTTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72105002	72102540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_72102894_72104959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004121	chr11	+	395	2	Antisense	novelGene_ENSMUSG00000020801.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAACCGAAGCCGATT	NA	NA	NA	NA	NA	NA	NA	NA	72102540	72105010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_+_72102900_72104974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004122	chr11	-	911	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	159	91	159	-91	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTCTGCCCCCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	72106259	72102640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004123	chr11	+	454	3	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	1389	7860	1389	-7860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGACACTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72333569	72334734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_72333680_72334301_72334478_72334566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004124	chr11	+	344	3	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	4251	5563	4251	-5563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATTGCCTTCCAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	72336431	72337031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_72336560_72336719_72336888_72336983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004125	chr11	+	370	2	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	6886	2804	6886	-2804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCAGGGTCAGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	72339066	72339790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_72339204_72339557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004126	chr11	+	318	2	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	7377	2640	7377	-2640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTACGGTCCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	72339557	72339954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_72339790_72339868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004127	chr11	+	329	2	ISM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	9354	629	9354	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGAATGGGATAACT	NA	NA	NA	NA	NA	NA	NA	NA	72341534	72341965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_72341601_72341702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004128	chr11	+	284	1	Genic_Genomic	ENSMUSG00000040463.17	novel	NA	NA	NA	NA	10131	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACTTGGACCTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72342311	72342595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_72342300_72342600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004129	chr11	+	1709	3	ISM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	70490	1484	70490	-1484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATACAAGAGCTAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	72568598	72575823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_72568710_72570194_72570319_72574349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004130	chr11	+	1530	1	ISM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	77669	0	77669	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72575777	72577307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_72575800_72577300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004131	chr11	+	2283	1	ISM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	79858	0	79717	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACTTGGACTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	72660689	72662972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_72660700_72663000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004132	chr11	-	1145	1	ISM	ENSMUSG00000057778.15	ENSMUST00000079681.6	2393	4	17480	0	17480	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTTTTTTTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72669202	72668057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_72668100_72669200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004133	chr11	-	1402	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	1409	-1	1409	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGATTTGGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	73027711	73026309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_73026300_73027700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004134	chr11	+	657	6	ISM	ENSMUSG00000005950.15	ENST00000345901.7	915	8	18	933	18	-933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTGAAGGTGGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	73051439	73057866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73051560_73055681_73055833_73056968_73057045_73057130_73057232_73057387_73057469_73057738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004135	chr11	-	806	1	Genic_Genomic	ENSMUSG00000047260.5	novel	NA	NA	NA	NA	680	2	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCGCATGGAATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	73067148	73066342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_73066300_73067100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004136	chr11	-	886	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	3	443	3	374	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGATGTTACTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	73067860	73066787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_73067578_73067764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004137	chr11	+	1424	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	2	97	2	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTAGATGTTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	73067910	73072881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004138	chr11	+	999	1	Genic_Genomic	ENSMUSG00000040158.13	novel	NA	NA	NA	NA	3885	1	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTTTGTCTGGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	73071980	73072979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_73072000_73073000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004139	chr11	-	1747	3	ISM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	12581	0	2325	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAACGTTTACTAGA	NA	NA	NA	NA	NA	NA	NA	NA	73077287	73074421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_73075878_73076063_73076182_73077114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004140	chr11	+	316	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	37	18995	37	-18995	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACTGGCTGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	73158398	73168658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73158489_73160485_73160607_73168553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004141	chr11	+	307	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	2130	18801	2130	-18801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGCCCCTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	73160491	73168852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73160607_73168553_73168659_73168765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004142	chr11	+	415	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	10409	16888	10409	-16888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGAAGGCAGAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	73168770	73170765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73168853_73169741_73169897_73170587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004143	chr11	+	433	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	11421	15012	11421	-15012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGATGCCGCAGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	73169782	73172641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73169897_73170587_73170765_73172499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004144	chr11	+	551	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	12274	12954	12274	-12954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGCCCCGCAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	73170635	73174699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73170765_73172499_73172641_73174418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004145	chr11	+	619	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	16056	9317	16056	-9317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGGGTCCCGGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	73174417	73178336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73174700_73176687_73176865_73178176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004146	chr11	+	345	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	20631	5091	20631	-5091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAGGAACTGTGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	73178992	73182562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73179096_73180060_73180135_73182394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004147	chr11	+	574	4	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	21697	1368	21697	-1368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTGCAGGTGAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	73180058	73186285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73180135_73182394_73182561_73184758_73184826_73186020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004148	chr11	+	317	2	NNC	ENSMUSG00000043029.3	novel	2427	17	NA	NA	26395	-1381	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGGATCTGGCGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	73184756	73186272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_73184822_73186020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004149	chr11	+	457	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	26396	285	26396	-285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGAGGGAAGGGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	73184757	73187368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73184826_73186020_73186296_73187254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004150	chr11	+	294	3	ISM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	27833	20	27833	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTACTGTTGCTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	73186194	73187633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73186296_73187254_73187368_73187553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004151	chr11	+	295	3	ISM	ENSMUSG00000043029.3	ENST00000301365.8	2506	18	28890	0	28890	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGCTTAAGGCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	73187251	73188027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_73187368_73187553_73187634_73187928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004152	chr11	-	313	1	ISM	ENSMUSG00000020774.10	ENSMUST00000021119.9	1530	6	19330	0	19330	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGATGACTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	73196130	73195817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_73195800_73196100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004153	chr11	-	145	1	FSM	ENSMUSG00000081552.2	ENSMUST00000118611.2	197	1	57	-5	57	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTAGTCTGCATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	73662889	73662744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_73662700_73662900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004154	chr11	+	1743	4	ISM	ENSMUSG00000020741.18	ENST00000570628.6	5185	25	11226	0	11226	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	74558485	74561673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74558587_74558672_74558808_74558892_74558967_74560240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004155	chr11	-	1322	1	ISM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	49398	2	48586	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATCTGGTGGGGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74566098	74564776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_74564800_74566100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004156	chr11	-	1560	3	ISM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	41532	2482	41532	-2474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGCTGTTTCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	74573152	74567257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_74568569_74570283_74570441_74573060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004157	chr11	+	1203	1	ISM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	56493	0	56493	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTAAGGCTGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	74718148	74719351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74718100_74719400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004158	chr11	+	587	2	FSM	ENSMUSG00000000282.13	ENST00000575394.1	602	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCAGACAGGCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	74721780	74733126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_74722228_74732986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004159	chr11	+	511	2	NNC	ENSMUSG00000000282.13	novel	602	2	NA	NA	88	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCAGACAGGCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	74721853	74733126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_74722225_74732986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004160	chr11	+	202	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	1	9834	1	-9834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGAAGCGGGGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	74788945	74789308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74789042_74789202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004161	chr11	+	302	3	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	256	8019	256	-8019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTGGCTAACCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	74789200	74791123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74789307_74790007_74790059_74790978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004162	chr11	+	207	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	300	8990	300	-8990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAAGCACCCAGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74789244	74790152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74789307_74790007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004163	chr11	+	283	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	2302	6702	2302	-6702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCACTGAGGAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	74791246	74792440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74791404_74792314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004164	chr11	+	367	3	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	3368	4360	3368	-4360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAATGTTTCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	74792312	74794782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74792479_74792928_74792993_74794645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004165	chr11	+	214	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	3921	4410	3921	-4410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAGAGGACGAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	74792865	74794732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74792993_74794645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004166	chr11	+	346	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	5709	3328	5709	-3328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTACCTGCCTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	74794653	74795814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74794840_74795654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004167	chr11	+	408	3	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	6709	2293	6709	-2293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACAGACAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74795653	74796849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74795818_74796031_74796143_74796716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004168	chr11	+	257	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	7770	860	7770	-860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTTGGGATGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	74796714	74798282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74796850_74798160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004169	chr11	+	247	2	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	9214	365	9214	-365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCAACAGAGGTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	74798158	74798777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74798278_74798649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004170	chr11	+	340	3	ISM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	9704	-34	9704	34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTGGGTTAAAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	74798648	74799176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74798791_74798871_74798947_74799053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004171	chr11	+	94	1	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	10106	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACTTATGACCCATATG	NA	NA	NA	NA	NA	NA	NA	NA	74799050	74799144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_74799000_74799100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004172	chr11	+	183	1	ISM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	11082	0	11041	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTGGATTCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	74799985	74800168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_74800000_74800200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004173	chr11	-	445	1	ISM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	2449	0	2449	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGTAGGCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	75067212	75066767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75066800_75067200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004174	chr11	-	563	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	15	2092	15	-2092	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTCTCAGGAGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	75069646	75068859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_75069214_75069437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004175	chr11	-	519	1	ISM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	49640	0	49626	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTCTGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75189510	75188991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75189000_75189500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004176	chr11	-	621	3	ISM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	42156	567	42156	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGGAGAAGAGTAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	75196980	75191742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75192230_75193493_75193581_75196933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004177	chr11	-	543	4	ISM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	35520	6779	35520	-6779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATCTTATCGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	75203616	75197954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75198118_75200958_75201092_75203125_75203275_75203518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004178	chr11	-	498	4	ISM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	32073	12628	32073	-12628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCCAGGGTTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	75207063	75203803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75203997_75204126_75204196_75205638_75205742_75206930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004179	chr11	-	617	1	Genic_Genomic	ENSMUSG00000000753.16	novel	NA	NA	NA	NA	7613	7	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGCTGCATTAGCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	75301204	75300587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_75300600_75301200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004180	chr11	-	1113	4	ISM	ENSMUSG00000000753.16	ENST00000254722.9	1250	7	2867	-305	2867	-70	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTCCACACACAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	75305950	75300664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004181	chr11	-	566	3	NNC	ENSMUSG00000000753.16	novel	1250	7	NA	NA	3941	-43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGGGGGCCCTCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	75304876	75301012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_75301220_75301659_75301871_75304728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004182	chr11	-	590	4	NNC	ENSMUSG00000000753.16	novel	1250	7	NA	NA	3009	-71	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTCTTTGTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	75305808	75301040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_75301220_75301659_75301862_75304728_75304876_75305746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004183	chr11	-	687	4	ISM	ENSMUSG00000000753.16	ENST00000254722.9	1250	7	2251	727	2251	-727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGAAGGCGAACTTACCAA	NA	NA	NA	NA	NA	NA	NA	NA	75306566	75301696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75301871_75304732_75304876_75305746_75305951_75306400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004184	chr11	-	584	4	NNC	ENSMUSG00000000753.16	novel	1250	7	NA	NA	2251	-834	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGACCATGATAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75306566	75301803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_75301871_75304728_75304876_75305746_75305951_75306400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004185	chr11	-	705	4	ISM	ENSMUSG00000000753.16	ENST00000254722.9	1250	7	1561	3762	1561	1564	internal_fragment	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAGGGATGGAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75307256	75304731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75304876_75305746_75305951_75306400_75306557_75307055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004186	chr11	-	623	4	ISM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	4703	5178	-7	523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCGTGGCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	75308824	75305772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75305951_75306400_75306557_75307055_75307255_75308734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004187	chr11	-	495	3	NNC	ENSMUSG00000000753.16	novel	605	4	NA	NA	1561	488	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACGAGGGAAATGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	75307256	75305807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_75305942_75306396_75306557_75307055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004188	chr11	-	752	4	FSM	ENSMUSG00000000753.16	ENSMUST00000125982.2	605	4	-146	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTGAAGTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	75313524	75306294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_75306557_75307055_75307255_75308734_75308823_75313321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004189	chr11	+	347	2	ISM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	2273	1069	2273	-1069	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTCTATAAACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75354637	75356433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75354684_75356132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004190	chr11	+	336	1	ISM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	4802	0	4802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAAAATTTTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	75357166	75357502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75357200_75357500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004191	chr11	+	356	2	ISM	ENSMUSG00000038217.14	ENSMUST00000043598.14	1153	5	1551	174	1551	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTCCTGGGCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	75360455	75361309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75360728_75361225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004192	chr11	+	264	1	NIC	ENSMUSG00000038217.14	novel	1112	5	NA	NA	2319	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGACATGACAGCCGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	75361223	75361487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_75361200_75361500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004193	chr11	+	144	2	ISM	ENSMUSG00000038195.7	ENST00000301336.7	966	6	890	525	890	-525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAGCTCAAAGCCAACG	NA	NA	NA	NA	NA	NA	NA	NA	75401863	75402203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75401931_75402126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004194	chr11	+	218	2	ISM	ENSMUSG00000038195.7	ENST00000301336.7	966	6	1167	25	1167	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACACCTGAAGAAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75402140	75402703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75402261_75402605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004195	chr11	+	124	1	NIC	ENSMUSG00000038195.7	novel	1489	8	NA	NA	1631	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGATCCTGCCTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	75402604	75402728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_75402600_75402700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004196	chr11	+	1003	1	ISM	ENSMUSG00000017781.18	ENSMUST00000143219.8	3761	12	39705	0	39683	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAGTATGGATTCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	75518627	75519630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75518600_75519600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004197	chr11	+	715	2	ISM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	15887	381	15887	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTACTCTGGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75538268	75539128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75538333_75538477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004198	chr11	+	1136	1	ISM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	16748	0	16180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGACTCCTTTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	75538561	75539697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75538600_75539700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004199	chr11	+	159	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	1885	15509	1885	-15509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCAGGCAGTGATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	75548583	75549225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75548695_75549177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004200	chr11	+	158	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	2602	15188	2602	-15188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGTGGGTATAATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	75549300	75549546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75549377_75549464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004201	chr11	+	204	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	2764	13617	2764	-13617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTCCGTCGGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	75549462	75551117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75549546_75550996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004202	chr11	+	194	3	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	4460	12933	4460	-12933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTACTACTGAGAACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	75551158	75551801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75551177_75551258_75551358_75551724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004203	chr11	+	186	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	6151	11592	6151	-11592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTGTCCTCTGCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	75552849	75553142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75552954_75553060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004204	chr11	+	174	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	6361	11245	6361	-11245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGCTGTGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	75553059	75553489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75553142_75553397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004205	chr11	+	160	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	6727	8295	6727	-8295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGATCCTGATGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	75553425	75556439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75553490_75556343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004206	chr11	+	183	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	12351	5379	12351	-5379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGGTCGGCCCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	75559049	75559355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75559113_75559235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004207	chr11	+	189	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	13133	4638	13133	-4638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTGAGAGAGACTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	75559831	75560096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75559948_75560023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004208	chr11	+	149	2	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	13322	4059	13322	-4059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGGGCGTGGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75560020	75560675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75560101_75560606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004209	chr11	+	275	3	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	14272	2671	14272	-2671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAACTACCCCCAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75560970	75562063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75561117_75561368_75561453_75562018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004210	chr11	+	932	3	ISM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	16083	567	16083	-567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGGGGAAAAGTCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	75562781	75564167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75562882_75562977_75563078_75563435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004211	chr11	+	1307	1	Genic_Genomic	ENSMUSG00000017774.20	novel	NA	NA	NA	NA	16736	5	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTGTGAGTGTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75563434	75564741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_75563400_75564700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004212	chr11	+	3119	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	196	975	169	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAATATGAACATGTG	NA	NA	NA	NA	NA	NA	NA	NA	75570305	75596759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_75570491_75583022_75583389_75594191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004213	chr11	+	2606	1	Genic_Genomic	ENSMUSG00000017776.16	novel	NA	NA	NA	NA	24993	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTATGTTGAATGTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	75595129	75597735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_75595100_75597700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004214	chr11	+	739	4	ISM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	0	8820	0	-7766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGTGGACAAAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75623694	75647851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004215	chr11	+	540	3	FSM	ENSMUSG00000020849.14	ENST00000575977.1	540	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTTCCTGCCCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	75623749	75655617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_75623918_75642706_75642907_75655445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004216	chr11	+	808	2	FSM	ENSMUSG00000020849.14	ENST00000573026.1	799	2	-5	-4	-5	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTCATTCTTGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	75623777	75656113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_75623918_75655445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004217	chr11	+	774	2	NNC	ENSMUSG00000020849.14	novel	799	2	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGCTGCTCATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75623801	75656109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_75623918_75655451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004218	chr11	+	765	2	NNC	ENSMUSG00000020849.14	novel	799	2	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGCTGCTCATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75623805	75656109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_75623918_75655456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004219	chr11	+	520	4	ISM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	19101	6142	19062	-5356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCAATGTCCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75642844	75650261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75642907_75646399_75646507_75647642_75647850_75650117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004220	chr11	+	1413	4	ISM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	22655	-3	22616	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGCCTCCATCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	75646398	75656406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_75646507_75647642_75647850_75650117_75650255_75655445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004221	chr11	+	456	2	NNC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	26369	187	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTACTGTATTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	75650151	75655804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_75650249_75655445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004222	chr11	+	1230	1	Genic_Genomic	ENSMUSG00000020849.14	novel	NA	NA	NA	NA	31660	1	mono-exon	FALSE	NA	NA	NA	NA	NA	703	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAACTATGGATCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	75655442	75656672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_75655400_75656700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004223	chr11	-	3510	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGGAATGCGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	75918606	75910019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_75913067_75915773_75915884_75918253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004224	chr11	-	465	2	ISM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	132476	-1	132345	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCCCTGAAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	75937997	75937050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75937409_75937890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004225	chr11	-	482	4	ISM	ENSMUSG00000017288.16	ENST00000680128.1	1900	16	62315	29238	62315	-29238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGACAACATTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	76008027	75983046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_75983142_75992812_75992915_76004766_76004909_76007884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004226	chr11	-	426	4	FSM	ENSMUSG00000017288.16	ENST00000679961.1	425	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATCCTCACAGACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	76070343	76025230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_76025355_76027024_76027141_76065452_76065534_76070238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004227	chr11	-	648	2	FSM	ENSMUSG00000017288.16	ENSMUST00000129256.2	650	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTATGTGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	76070462	76067784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_76068209_76070238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004228	chr11	+	2131	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTATGTGCCCTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	76092840	76100243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004229	chr11	-	1488	1	ISM	ENSMUSG00000017286.16	ENSMUST00000169701.8	4203	9	31605	0	31401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	76102884	76101396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76101400_76102900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004230	chr11	-	1506	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	71	1963	71	-1963	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCGGGTTATCCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	76108419	76103359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_76104750_76108303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004231	chr11	-	1112	6	ISM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	5911	-19	5645	19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAATCTACTGCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76128640	76112316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004232	chr11	-	457	4	ISM	ENSMUSG00000017286.16	ENSMUST00000170710.8	1445	9	2533	12595	2533	-12443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACTTGCAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	76131752	76125214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76125352_76128494_76128640_76130277_76130399_76131698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004233	chr11	-	688	4	ISM	ENSMUSG00000017286.16	ENST00000536578.5	1619	10	547	15791	-269	-15791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAACTGAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	76134820	76128562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76128640_76130277_76130399_76131698_76131749_76134380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004234	chr11	-	684	2	ISM	ENSMUSG00000017286.16	ENST00000536578.5	1619	10	1	21716	1	-21716	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGTGTTGGGAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	76135366	76134487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76134908_76135102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004235	chr11	+	1488	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATGAGTGTTTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	76134562	76141445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004236	chr11	-	912	1	ISM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	141031	0	141031	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGAGTCCTTTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	76148935	76148023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76148000_76148900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004237	chr11	-	997	2	ISM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	137506	646	137506	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCCCTTAGCCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	76152460	76148669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76149574_76152367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004238	chr11	+	2250	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	91	476	91	-476	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACTCAATTAGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	76298059	76306642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004239	chr11	+	1810	1	Genic_Genomic	ENSMUSG00000020843.16	novel	NA	NA	NA	NA	7341	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTGATTAAGTCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	76305309	76307119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_76305300_76307100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004240	chr11	-	882	1	ISM	ENSMUSG00000017631.20	ENSMUST00000094012.11	5236	22	91804	0	19500	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	76308441	76307559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76307600_76308400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004241	chr11	-	217	3	ISM	ENSMUSG00000017631.20	ENST00000572441.5	373	4	11780	-2	11780	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATAGAAGAGGTGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	76316161	76314961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76315000_76315739_76315850_76316092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004242	chr11	-	336	3	ISM	ENSMUSG00000017631.20	ENST00000572441.5	373	4	2	775	2	-775	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGCTGTCTTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	76327939	76315738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76315850_76316092_76316153_76327774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004243	chr11	+	290	1	FSM	ENSMUSG00000024205.8	ENSMUST00000136893.3	311	1	75	-54	75	54	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCACCTGTAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76492219	76492509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_76492200_76492500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004244	chr11	-	418	1	ISM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	36560	0	27784	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTCTTTGGTTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	76617845	76617427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76617400_76617800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004245	chr11	-	889	7	ISM	ENSMUSG00000010392.9	ENST00000225724.9	857	8	1	9081	1	-3221	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGGCCAGATGATCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	76645628	76620648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004246	chr11	+	659	3	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	13	37336	13	-37336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTACCTGTTTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	76836342	76840869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_76836720_76837067_76837266_76840785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004247	chr11	+	913	5	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	21299	335	21299	-335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCATGCTGCCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	76857628	76877870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004248	chr11	+	602	1	ISM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	41274	0	41274	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCGGCGTGTCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76877603	76878205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_76877600_76878200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004249	chr11	-	1379	1	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	32765	0	32765	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACATCCTGTAAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	76936496	76935117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76935100_76936500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004250	chr11	-	1681	3	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	28951	1103	28951	-1103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTACATGTAAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	76940310	76936220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_76937581_76939178_76939288_76940098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004251	chr11	+	607	2	Genic_Genomic	ENSMUSG00000102038.2	novel	898	1	NA	NA	182	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCATCAAGAATGACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	77040635	77041326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_77040807_77040890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004252	chr11	+	479	1	FSM	ENSMUSG00000102038.2	ENSMUST00000119288.2	898	1	484	-65	484	65	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCTCTCCTTCACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	77040937	77041416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_77040900_77041400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004253	chr11	+	232	2	FSM	ENSMUSG00000037926.16	ENST00000582084.1	231	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCCCTCCAGGCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	77106990	77107342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_77107119_77107238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004254	chr11	+	227	2	NNC	ENSMUSG00000037926.16	novel	231	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCCTCCAGGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	77106991	77107341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_77107116_77107238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004255	chr11	+	587	6	FSM	ENSMUSG00000037926.16	ENST00000324677.12	590	6	6	-3	6	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCTTTTGATATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	77239222	77308361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004256	chr11	+	1840	2	ISM	ENSMUSG00000037926.16	ENST00000649863.1	4463	14	101225	996	101127	-996	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCACACCCTTCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	77340343	77345350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77341049_77344215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004257	chr11	+	1218	1	ISM	ENSMUSG00000037926.16	ENSMUST00000037912.12	9178	15	238022	4694	105918	6	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGTGTAATATGTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	77345134	77346352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77345100_77346400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004258	chr11	+	360	2	ISM	ENSMUSG00000020836.16	ENSMUST00000102493.8	2804	11	243	6374	243	-5391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGGGTGAGGGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	77353479	77354936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77353581_77354677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004259	chr11	+	335	2	ISM	ENSMUSG00000020836.16	ENSMUST00000021190.9	1418	10	-10	3711	-10	-3711	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGACTAGTGGATGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	77354726	77356616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77354937_77356491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004260	chr11	+	371	3	ISM	ENSMUSG00000020836.16	ENSMUST00000021190.9	1418	10	1798	2923	1798	-2923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAGAGTCAAGTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	77356534	77357404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77356615_77357020_77357151_77357243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004261	chr11	+	364	3	ISM	ENSMUSG00000020836.16	ENSMUST00000108391.9	1593	10	2572	1284	2497	-1184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTACCATTCTACGAT	NA	NA	NA	NA	NA	NA	NA	NA	77357233	77359143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77357426_77358575_77358696_77359091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004262	chr11	+	364	1	ISM	ENSMUSG00000020836.16	ENSMUST00000102493.8	2804	11	7710	0	6210	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTGAAACCGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77360946	77361310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77360900_77361300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004263	chr11	-	1013	3	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	4096	0	4096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTGGGAGATTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	77400100	77398924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_77399204_77399282_77399818_77399901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004264	chr11	+	664	2	Antisense	novelGene_ENSMUSG00000044328.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCCTGGGGGCGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	77398924	77399668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_+_77399206_77399285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004265	chr11	-	831	3	ISM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	3640	393	3640	-393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCCACGGCAGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	77400556	77399317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_77399818_77399901_77400100_77400423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004266	chr11	+	575	3	FSM	ENSMUSG00000037857.17	ENST00000579665.1	562	3	-8	-5	-8	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATACATATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77576989	77600706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_77577334_77596334_77596368_77600508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004267	chr11	-	554	2	Antisense	novelGene_ENSMUSG00000037857.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCTTCTCCGCGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	77600704	77576996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_77577336_77600489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004268	chr11	+	550	2	NNC	ENSMUSG00000037857.17	novel	562	3	NA	NA	-1	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATACATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77576996	77600704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_77577351_77600508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004269	chr11	-	544	2	Antisense	novelGene_ENSMUSG00000037857.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTGCTTCTCCGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	77600704	77576998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_77577336_77600497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004270	chr11	+	548	2	NNC	ENSMUSG00000037857.17	novel	562	3	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATACATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77577003	77600702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_77577334_77600484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004271	chr11	+	1377	6	ISM	ENSMUSG00000000632.14	ENSMUST00000000646.14	3964	16	22462	5849	22462	-5849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTTCTTCGTGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	77844299	77864017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004272	chr11	+	1373	3	ISM	ENSMUSG00000020834.18	ENSMUST00000122342.2	1791	4	1729	-2	1729	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGCTCCCGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	77924906	77928692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77924963_77925100_77925413_77927687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004273	chr11	+	1890	5	ISM	ENSMUSG00000061981.15	ENST00000394906.6	2733	13	19735	1	19735	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTCATCGTATATTCT	NA	NA	NA	NA	NA	NA	NA	NA	77948544	77951258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004274	chr11	+	1243	1	Genic_Genomic	ENSMUSG00000061981.15	novel	NA	NA	NA	NA	21209	1	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATCGTATATTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	77950018	77951261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_77950000_77951300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004275	chr11	-	414	1	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	6594	0	6594	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	77964615	77964201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_77964200_77964600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004276	chr11	-	430	2	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	6020	453	6020	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCAGCCAGCCTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	77965189	77964654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_77965001_77965105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004277	chr11	-	518	3	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	4544	1101	4544	-1101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGGCAGAGGAAAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	77966665	77965302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_77965454_77966216_77966466_77966547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004278	chr11	-	434	2	ISM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	3	4884	3	-4884	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTACAGATATCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	77971206	77969085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_77969216_77970902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004279	chr11	+	2691	3	FSM	ENSMUSG00000037750.17	ENST00000582059.6	3706	3	21	994	21	262	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCCCTCTTGCCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	78006672	78047163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_78006713_78033918_78034041_78044634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004280	chr11	+	2434	2	ISM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	27487	692	27267	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTAGGTAAAGGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	78033918	78046834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78034041_78044522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004281	chr11	+	3059	1	ISM	ENSMUSG00000037750.17	ENST00000582059.6	3706	3	38447	0	38447	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCAACCTCATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78045098	78048157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78045100_78048200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004282	chr11	-	278	2	ISM	ENSMUSG00000017386.11	ENST00000262396.10	618	5	4033	-1	4033	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTTTGGCTTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	78052261	78050738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78050868_78052112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004283	chr11	-	132	1	ISM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	5545	513	5424	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTTTGGCTTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	78050870	78050738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78050700_78050900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004284	chr11	-	238	2	ISM	ENSMUSG00000017386.11	ENST00000262396.10	618	5	3848	1400	3848	-1400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTCAGTGGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	78052446	78052139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78052275_78052343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004285	chr11	-	305	3	ISM	ENSMUSG00000017386.11	ENST00000262396.10	618	5	24	1603	24	-1603	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGGGTGGGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	78056270	78052342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78052449_78053207_78053260_78056123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004286	chr11	+	333	3	ISM	ENSMUSG00000019437.18	ENST00000394933.7	733	4	13	711	13	-255	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGGGAGAACCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	78068893	78070446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78069063_78070195_78070279_78070365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004287	chr11	+	302	2	ISM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	871	639	794	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGGACCCTGGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	78070381	78071007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78070449_78070772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004288	chr11	+	286	1	NIC	ENSMUSG00000019437.18	novel	2897	6	NA	NA	1287	3	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAACCCAGGACTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	78070874	78071160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_78070900_78071200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004289	chr11	+	125	1	ISM	ENSMUSG00000019437.18	ENSMUST00000092880.14	2700	4	2043	1091	1932	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGTCTTAATTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	78071519	78071644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78071500_78071600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004290	chr11	-	500	4	ISM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	592	0	592	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78073818	78071760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004291	chr11	-	440	3	NNC	ENSMUSG00000058546.9	novel	560	5	NA	NA	593	-219	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATAATCATTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	78073817	78071979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_78072050_78072242_78072420_78073624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004292	chr11	-	430	3	ISM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	-2	481	-2	-481	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGGGCCAGGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78074412	78072241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78072420_78073628_78073813_78074344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004293	chr11	-	405	3	NNC	ENSMUSG00000058546.9	novel	560	5	NA	NA	2	-506	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAAAGTCAATACCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	78074408	78072266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_78072420_78073624_78073813_78074344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004294	chr11	+	690	4	FSM	ENSMUSG00000002059.19	ENST00000636513.1	689	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGAGGATGCCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	78079746	78081563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_78080217_78081114_78081217_78081303_78081369_78081510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004295	chr11	+	120	2	ISM	ENSMUSG00000002059.19	ENSMUST00000207728.2	567	3	404	510	404	-510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGCCTGCCAGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	78080151	78080451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78080217_78080396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004296	chr11	+	95	2	ISM	ENSMUSG00000002059.19	ENSMUST00000056241.12	1558	10	1252	1867	1209	183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTACCATCGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	78080956	78081144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78081022_78081114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004297	chr11	+	1095	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	3	170	3	-170	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATAGCTTTCTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	78136574	78146152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_78136997_78141841_78142039_78145676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004298	chr11	+	491	3	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	370	-403	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGAGTTGCTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	78136941	78145919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_78136997_78141845_78142039_78145676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004299	chr11	+	487	2	NNC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	5293	-329	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTTTGTAGACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	78141864	78145993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_78142039_78145680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004300	chr11	+	498	1	Genic_Genomic	ENSMUSG00000002064.11	novel	NA	NA	NA	NA	9255	2	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTCATTTATTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	78145826	78146324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_78145800_78146300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004301	chr11	+	784	2	ISM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	1776	-126	1776	126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTCAAGTTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	78216801	78217712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78216961_78217087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004302	chr11	+	459	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	582	7169	582	-7169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGCTCAAGTCCAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	78219822	78226439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78219913_78223775_78223866_78224492_78224585_78226252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004303	chr11	+	444	3	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	5251	5952	5251	-5952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACCAGGAATGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	78224491	78227656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78224585_78226252_78226461_78227513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004304	chr11	+	470	3	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	7009	4878	7009	-4878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCTGAGAGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	78226249	78228730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78226461_78227513_78227657_78228614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004305	chr11	+	412	3	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	8270	3289	8270	-3289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACCCTATGCAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	78227510	78230319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78227657_78228614_78228730_78230168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004306	chr11	+	490	4	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	9450	1354	9450	-1354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGGTAAATGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	78228690	78232254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78228730_78230168_78230315_78230834_78230936_78232050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004307	chr11	+	728	3	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	11612	615	11612	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCACTGGCTTGCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78230852	78232993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78230936_78232050_78232262_78232559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004308	chr11	+	447	1	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	13921	0	13921	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATAACTCGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78233161	78233608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78233200_78233600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004309	chr11	+	734	2	ISM	ENSMUSG00000020829.10	ENST00000618626.1	1254	4	-124	4654	5	-4654	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCATGGCTCTATACGCA	NA	NA	NA	NA	NA	NA	NA	NA	78356527	78357606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78356832_78357176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004310	chr11	+	1008	3	ISM	ENSMUSG00000020829.10	ENST00000618626.1	1254	4	922	-331	922	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGAGACCGACCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78357573	78362591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78358030_78361520_78361678_78362196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004311	chr11	+	554	3	ISM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	1115	1173	986	-662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCCACTCTGAACTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	78357637	78361598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78358030_78359450_78359535_78361520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004312	chr11	+	445	1	ISM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	5804	0	5675	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTTTGGGGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	78362326	78362771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78362300_78362800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004313	chr11	-	228	1	Genic_Genomic	ENSMUSG00000051232.14	novel	NA	NA	NA	NA	4891	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCTTTGGTCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78398107	78397879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_78397900_78398100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004314	chr11	-	370	3	ISM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	3480	534	3480	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGGTTCTTTGGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	78399518	78398414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78398632_78399144_78399258_78399478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004315	chr11	-	313	4	ISM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	1754	1268	1754	-1268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGTGAGTAGGCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	78401244	78399148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78399258_78399478_78399522_78400550_78400641_78401173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004316	chr11	-	329	3	ISM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	71	2710	71	-2710	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAGTATAAGCGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	78402927	78400590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78400641_78401173_78401248_78402722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004317	chr11	-	2285	1	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	11137	0	11130	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGTTCCCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	78415960	78413675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78413700_78416000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004318	chr11	-	2577	4	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	7805	441	7798	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACATAGCAGGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	78419292	78414116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004319	chr11	-	485	2	ISM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	5930	6219	5923	-4605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGAAGTGTCACGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	78421167	78419894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78420066_78420853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004320	chr11	+	1131	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	78427196	78432563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004321	chr11	+	240	2	ISM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	19	2531	19	-2531	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTGAGTACCATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	78427287	78429784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_78427403_78429659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004322	chr11	+	144	1	NIC	ENSMUSG00000001105.16	novel	1141	6	NA	NA	4916	13	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACCCCAACCAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	78432184	78432328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_78432200_78432300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004323	chr11	-	1336	3	NNC	ENSMUSG00000037278.10	novel	1375	3	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78441564	78432642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_78433619_78434307_78434457_78441353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004324	chr11	-	1376	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78441604	78432642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_78433623_78434311_78434457_78441353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004325	chr11	-	1372	3	NNC	ENSMUSG00000037278.10	novel	1375	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78441596	78432642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_78433623_78434307_78434457_78441353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004326	chr11	-	1362	3	NNC	ENSMUSG00000037278.10	novel	1375	3	NA	NA	8	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	78441595	78432642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_78433623_78434311_78434452_78441353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004327	chr11	-	326	1	FSM	ENSMUSG00000082110.2	ENSMUST00000119052.2	395	1	95	-26	95	26	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATTTTTAGGTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	78476286	78475960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_78476000_78476300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004328	chr11	-	1002	2	FSM	ENSMUSG00000017376.16	ENST00000582037.2	969	2	-2	-31	-2	31	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTTTAAACTAGCTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	78587128	78581163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_78581672_78586634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004329	chr11	-	727	2	NNC	ENSMUSG00000017376.16	novel	969	2	NA	NA	116	-130	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATTTCAACTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	78587010	78581324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_78581672_78586630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004330	chr11	-	412	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	812	0	812	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTGCCTTATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	78641743	78641331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_78641300_78641700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004331	chr11	-	700	4	FSM	ENSMUSG00000001123.16	ENST00000581545.5	705	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATAAGGGCTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	78864012	78854205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_78854368_78856823_78856997_78862087_78862254_78863813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004332	chr11	-	618	4	ISM	ENSMUSG00000001123.16	ENST00000583322.5	868	5	1810	0	1810	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATAAGGGCTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	78862207	78854205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_78854368_78856517_78856681_78856823_78856997_78862087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004333	chr11	-	1093	1	Genic_Genomic	ENSMUSG00000017677.12	novel	NA	NA	NA	NA	14143	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCATGGGTTGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	79131289	79130196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_79130200_79131300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004334	chr11	-	1366	4	ISM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	12515	120	12450	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTTTTATTTATCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	79132982	79130317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004335	chr11	+	447	4	FSM	ENSMUSG00000020716.17	ENST00000457709.1	446	4	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATATGGATTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	79302322	79325746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_79302496_79302880_79303004_79303509_79303585_79325670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004336	chr11	+	775	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	45	29255	45	9298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCACTTTGTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	79331754	79335042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79331924_79332454_79332529_79332716_79332801_79334594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004337	chr11	+	626	3	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	1046	28732	1046	9821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCATTCTGTCCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	79332755	79335565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79332801_79334594_79335036_79335425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004338	chr11	+	518	3	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	3072	28324	3072	10229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTCTCAGAAGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	79334781	79335973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79335036_79335425_79335566_79335849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004339	chr11	+	507	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	4881	25174	4881	13379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTCTTGCCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	79336590	79339123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79336626_79337631_79337749_79338309_79338492_79338950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004340	chr11	+	662	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	6600	19267	6600	-19267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCATCTTGTCACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	79338309	79345030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79338492_79338950_79339163_79344628_79344791_79344924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004341	chr11	+	508	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	12924	3611	12924	-3611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCACGAAGGTAAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	79344633	79360686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79344791_79344924_79345029_79359542_79359702_79360598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004342	chr11	+	467	4	ISM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	27913	0	27913	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTAAAACACAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	79359622	79364297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79359702_79360598_79360697_79362260_79362408_79364154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004343	chr11	-	717	1	Genic_Genomic	ENSMUSG00000078771.11	novel	NA	NA	NA	NA	3314	2	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTATGTATCTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	79418100	79417383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_79417400_79418100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004344	chr11	-	909	2	FSM	ENSMUSG00000078771.11	ENSMUST00000103236.4	1463	2	0	554	0	-546	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGTGGGTTGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	79421414	79417939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_79418629_79421194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004345	chr11	-	284	2	FSM	ENSMUSG00000078771.11	ENSMUST00000170799.8	2289	2	147	1858	126	-1858	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGCATCCTAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	79421288	79419251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_79419442_79421194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004346	chr11	+	572	3	ISM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	51	9427	51	-9427	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCATGCCCCGACGATGA	NA	NA	NA	NA	NA	NA	NA	NA	79551461	79574293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79551683_79571613_79571838_79574166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004347	chr11	+	262	3	ISM	ENSMUSG00000017548.16	ENST00000578070.5	416	5	14308	-2	14308	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATATTCCTTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	79904187	79906129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_79904224_79904356_79904422_79905968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004348	chr11	+	160	1	NIC	ENSMUSG00000017548.16	novel	4303	15	NA	NA	16088	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGATATTCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79905967	79906127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_79906000_79906100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004349	chr11	-	434	1	ISM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	34012	0	34012	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTGGTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79937752	79937318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_79937300_79937800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004350	chr11	-	613	3	NNC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	24405	-831	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTGGACAAAACCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	79947359	79938149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_79938564_79939417_79939531_79947273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004351	chr11	-	404	2	ISM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	21558	11299	21558	-11299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATGCTCTTACCATG	NA	NA	NA	NA	NA	NA	NA	NA	79950206	79948617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_79948841_79950025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004352	chr11	-	543	4	ISM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	12	12781	12	-12781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCCCGCCCACCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	79971752	79950099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_79950204_79950923_79951012_79955017_79955226_79971609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004353	chr11	-	604	1	NIC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	4894	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80028107	80027503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_80027500_80028100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004354	chr11	-	1171	3	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	1850	41	1850	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGAGCCAAGACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	80031151	80027544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_80028106_80028743_80028894_80030691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004355	chr11	-	499	2	FSM	ENSMUSG00000086507.2	ENST00000442757.1	492	2	-4	-3	-4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCCCAGAAAAACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	80068552	80067907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_80068225_80068370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004356	chr11	-	492	2	NNC	ENSMUSG00000086507.2	novel	492	2	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCCCAGAAAAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80068550	80067908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_80068221_80068370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004357	chr11	-	317	1	NIC	ENSMUSG00000086507.2	novel	984	3	NA	NA	229	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTCCCAGAAAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	80068226	80067909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_80067900_80068200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004358	chr11	-	468	2	NNC	ENSMUSG00000086507.2	novel	492	2	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTCCCAGAAAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	80068528	80067909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_80068241_80068391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004359	chr11	+	1439	3	ISM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	10031	0	10031	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGAGTTCATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	80084707	80090583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80084875_80087698_80087774_80089386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004360	chr11	-	1417	1	ISM	ENSMUSG00000057181.16	ENSMUST00000179332.8	4536	10	16107	0	16107	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGCTTAAATAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80252734	80251317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_80251300_80252700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004361	chr11	-	1440	3	ISM	ENSMUSG00000057181.16	ENSMUST00000179332.8	4536	10	9897	2248	9897	-2247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTCAAGATGAAACATTC	NA	NA	NA	NA	NA	NA	NA	NA	80258944	80253565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_80254845_80255661_80255766_80258887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004362	chr11	+	786	7	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	5727	1076	5633	-394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGTTGGACCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	80279855	80285998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004363	chr11	+	1308	4	ISM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	8561	86	8467	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGCTGTGGACCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	80282689	80286988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80282819_80285111_80285358_80285927_80286088_80286215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004364	chr11	+	791	2	NNC	ENSMUSG00000017421.19	novel	2311	11	NA	NA	11729	-196	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTGCAGGGTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	80285951	80286875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_80286088_80286220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004365	chr11	+	789	1	NIC	ENSMUSG00000017421.19	novel	2898	17	NA	NA	12065	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATACATGATTGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	80286287	80287076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_80286300_80287100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004366	chr11	+	287	3	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	9	33598	7	-33598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCGTCTGGTCCGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80319457	80329137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80319582_80322530_80322633_80329076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004367	chr11	+	343	4	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	3081	25953	3079	-25953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTGCATTTGGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	80322529	80336782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80322633_80329076_80329202_80336067_80336140_80336739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004368	chr11	+	341	4	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	9651	15561	9649	-15561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGCTGCCTTAACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80329099	80347174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80329202_80336067_80336140_80336739_80336798_80347065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004369	chr11	+	400	3	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	17289	11169	17287	-11169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGATCACTAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80336737	80351566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80336798_80347065_80347261_80351421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004370	chr11	+	266	3	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	27752	9238	27750	-9238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGAATATTGTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	80347200	80353497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80347261_80351421_80351567_80353436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004371	chr11	+	398	4	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	31970	1982	31968	-1982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAACCTTCCTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	80351418	80360753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80351567_80353436_80353498_80355839_80355903_80360627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004372	chr11	+	426	3	ISM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	41759	121	41757	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTCCACTTTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	80361207	80362614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80361245_80361451_80361504_80362277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004373	chr11	+	439	3	ISM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	41999	1297	41999	42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCTTACACTACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	80361449	80362777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80361504_80362277_80362421_80362535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004374	chr11	+	335	1	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	42975	25	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTCTAAATAAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80362425	80362760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_80362400_80362800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004375	chr11	+	269	1	ISM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	44355	0	44355	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCTTTCTTGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	80363805	80364074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80363800_80364100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004376	chr11	+	665	5	ISM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	20	4481	20	-4481	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAAGATGAAGACGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	80701020	80708378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004377	chr11	+	993	6	ISM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	2431	255	2431	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGCTAGGTCGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	80703431	80712604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004378	chr11	+	613	1	Genic_Genomic	ENSMUSG00000035413.9	novel	NA	NA	NA	NA	11247	1	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAGTTACCGAGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	80712247	80712860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_80712200_80712900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004379	chr11	-	980	1	NIC	ENSMUSG00000020704.14	novel	3436	10	NA	NA	90455	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCACACCATCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	80771985	80771005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_80771000_80772000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004380	chr11	-	1081	3	ISM	ENSMUSG00000020704.14	ENST00000359872.6	1865	9	88142	18	88142	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGTCTTGTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80774298	80771023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_80771985_80772438_80772508_80774247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004381	chr11	-	1426	4	ISM	ENSMUSG00000020704.14	ENSMUST00000021045.13	3436	10	539	13834	539	-13823	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAACTGCCGCATGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	81043608	80784828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_80784951_80843305_80843434_80862289_80862441_81042583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004382	chr11	+	815	3	FSM	ENSMUSG00000035385.6	ENSMUST00000000193.6	813	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTGAGTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	81926395	81928280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_81926564_81927308_81927427_81927751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004383	chr11	+	796	3	NNC	ENSMUSG00000035385.6	novel	813	3	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACTTTGAGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81926411	81928279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_81926564_81927308_81927425_81927751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004384	chr11	+	786	3	NNC	ENSMUSG00000035385.6	novel	813	3	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACTTTGAGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81926418	81928279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_81926564_81927308_81927422_81927751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004385	chr11	+	767	3	NNC	ENSMUSG00000035385.6	novel	813	3	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACTTTGAGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81926436	81928279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_81926564_81927314_81927427_81927751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004386	chr11	+	748	3	FSM	ENSMUSG00000035373.3	ENSMUST00000021011.3	801	3	1	52	1	-52	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTATGACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	81936538	81938299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_81936686_81937343_81937456_81937810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004387	chr11	+	527	1	Genic_Genomic	ENSMUSG00000035373.3	novel	NA	NA	NA	NA	1291	4	mono-exon	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGATGCTGTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	81937828	81938355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_81937800_81938400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004388	chr11	+	577	1	ISM	ENSMUSG00000020676.3	ENSMUST00000000342.3	1082	3	4556	0	4556	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTAACATTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	81953204	81953781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_81953200_81953800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004389	chr11	+	193	1	ISM	ENSMUSG00000009185.3	ENSMUST00000009329.3	511	3	1422	0	1422	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGCATTTTTATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	82007432	82007625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_82007400_82007600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004390	chr11	+	1598	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	-6	-1	-6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGGGTATTCTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	82655164	82656762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_82655200_82656800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004391	chr11	-	886	1	ISM	ENSMUSG00000020696.19	ENSMUST00000074515.11	4973	7	24337	1372	24325	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTGTCCCATCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	82695532	82694646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82694600_82695500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004392	chr11	-	1323	4	ISM	ENSMUSG00000020696.19	ENST00000394597.7	1783	6	33215	-2	16371	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGTTGAGTCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	82703486	82696263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82697016_82700818_82701045_82701853_82701938_82703225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004393	chr11	-	752	1	NIC	ENSMUSG00000020696.19	novel	4973	7	NA	NA	22841	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAGGTTGAGTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	82697016	82696264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_82696300_82697000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004394	chr11	-	1370	3	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	58363	4	16219	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTCTAGGTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	82703638	82696269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82697016_82700833_82701045_82703225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004395	chr11	-	977	4	ISM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	2	4567	2	-2585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACTGTTGGGGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	82761999	82700832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82701045_82703225_82703637_82709241_82709430_82761833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004396	chr11	-	147	2	ISM	ENSMUSG00000018841.18	ENSMUST00000092844.13	1228	9	8916	542	8916	-542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTACCCGGATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	82772499	82770104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82770179_82772426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004397	chr11	-	126	2	ISM	ENSMUSG00000018841.18	ENSMUST00000021033.16	1201	8	7069	4148	7069	-4148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCGCTCATCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	82774346	82773710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82773809_82774318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004398	chr11	-	147	2	ISM	ENSMUSG00000018841.18	ENSMUST00000021033.16	1201	8	6647	4804	6647	-4804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTCCTCCAGCTACTACA	NA	NA	NA	NA	NA	NA	NA	NA	82774768	82774366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82774454_82774708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004399	chr11	-	126	2	ISM	ENSMUSG00000018841.18	ENSMUST00000092844.13	1228	9	557	11011	557	-11011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCTATGAGGAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	82780858	82780573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82780637_82780795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004400	chr11	-	694	4	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	5237	0	5206	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	82794000	82791593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004401	chr11	-	2632	4	FSM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	2	-5	2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTATATTCTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	82879092	82872061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_82872813_82872979_82873704_82875382_82875512_82878064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004402	chr11	+	217	2	ISM	ENSMUSG00000093483.2	ENSMUST00000177533.2	308	3	224	0	224	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTATTTGTTTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	83182791	83185455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83182894_83185340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004403	chr11	+	251	2	ISM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	246	-1	224	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTTGTTTGGGTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	83182791	83185459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83182924_83185340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004404	chr11	+	120	1	NIC	ENSMUSG00000093483.2	novel	356	3	NA	NA	2771	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATTTGTTTGGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	83185338	83185458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_83185300_83185500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004405	chr11	-	617	1	ISM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	3286	433	3204	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83186517	83185900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_83185900_83186500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004406	chr11	-	672	2	ISM	ENSMUSG00000018733.11	ENSMUST00000175741.8	2337	4	1096	1006	1096	-1005	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCAGCATCTAATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83188625	83186906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_83187267_83188313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004407	chr11	-	642	2	ISM	ENSMUSG00000018733.11	ENSMUST00000175741.8	2337	4	492	2413	492	-2412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCCATTCCTAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	83189229	83188313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_83188868_83189141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004408	chr11	+	2783	2	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	25728	3	25728	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGTTGGTTTCTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	83670249	83674577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83670432_83671976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004409	chr11	+	2603	1	ISM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	27456	0	27456	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTGGTTTCTGGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83671977	83674580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83672000_83674600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004410	chr11	+	256	1	FSM	ENSMUSG00000081342.2	ENSMUST00000122379.2	629	1	386	-13	386	13	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGCAAAGGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	83691675	83691931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_83691700_83691900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004411	chr11	+	864	3	ISM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	-1	27201	-1	-27201	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCAGGAGCCCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	83741742	83752807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83742219_83746729_83746930_83752619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004412	chr11	+	626	3	ISM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	4984	25003	2942	-25003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAAGGCCAGCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	83746727	83755005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83746930_83752619_83752807_83754768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004413	chr11	+	584	3	ISM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	10876	6369	8834	-6369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACTCCTGGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	83752619	83773639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83752807_83754768_83755005_83773478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004414	chr11	+	530	3	ISM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	13023	0	10981	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAAGTGCTGCCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	83754766	83780008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83755005_83773478_83773640_83779877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004415	chr11	+	165	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	123	19761	123	-19761	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGGAGCATTGCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	83833010	83834153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83833091_83834068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004416	chr11	+	151	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	1270	18512	1270	-18512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCTCTGTAGAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	83834157	83835402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83834268_83835361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004417	chr11	+	145	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	2546	16901	2546	-16901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGGAATATAAAATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	83835433	83837013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83835496_83836930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004418	chr11	+	134	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	4169	14570	4169	-14570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTGAAACAACCAACAAATA	NA	NA	NA	NA	NA	NA	NA	NA	83837056	83839344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83837117_83839270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004419	chr11	+	153	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	6401	13479	6401	-13479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGTACAGGATTCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	83839288	83840435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83839415_83840408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004420	chr11	+	144	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	7549	11739	7549	-11739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACCTAACAAAGTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	83840436	83842175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83840521_83842115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004421	chr11	+	139	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	9227	10912	9227	-10912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCTGGCTTCCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	83842114	83843002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83842189_83842937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004422	chr11	+	143	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	11163	7958	11163	-7958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTTTCCATGAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	83844050	83845956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83844144_83845906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004423	chr11	+	148	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	13017	7777	13017	-7777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGCAGGAAAAATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	83845904	83846137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83846030_83846114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004424	chr11	+	134	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	13906	5569	13906	-5569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAGAAACTACTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	83846793	83848345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83846874_83848291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004425	chr11	+	151	2	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	15402	3565	15402	-3565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTAAACAGTAAGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	83848289	83850349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83848364_83850272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004426	chr11	+	138	1	ISM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	20889	0	20889	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	83853776	83853914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83853800_83853900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004427	chr11	+	656	4	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	23439	46466	23439	-46466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAACAGAGTTGAATATG	NA	NA	NA	NA	NA	NA	NA	NA	83878740	83885288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83878817_83880505_83880703_83881520_83881770_83885154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004428	chr11	+	694	4	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	25203	38958	25203	-38958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGACAATTTGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	83880504	83892796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83880703_83881520_83881770_83885154_83885289_83892683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004429	chr11	+	1040	4	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	29851	31583	29851	-31583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCAAAGAAGACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83885152	83900171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83885289_83892683_83892797_83892998_83893062_83899443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004430	chr11	+	1474	3	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	44372	17540	44365	-17498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTTTTCCACTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	83899666	83914256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83900377_83910185_83910780_83914086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004431	chr11	+	723	3	ISM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	54975	16595	54975	-16595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATCTGGTCCTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	83910276	83915159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_83910780_83914086_83914251_83915103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004432	chr11	-	506	1	ISM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	19811	0	18534	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	83939372	83938866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_83938900_83939400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004433	chr11	-	1452	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	-5	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	83959188	83938866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_83940137_83941657_83941747_83959095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004434	chr11	-	228	3	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	64395	-3	64332	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAGTGCTTGTATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	84340016	84333387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84333464_84336452_84336534_84339945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004435	chr11	-	403	4	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	42854	3060	42791	-3060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTGCTAAGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	84361557	84336450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84336534_84339945_84340014_84358286_84358371_84361389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004436	chr11	-	323	2	NNC	ENSMUSG00000018697.15	novel	1689	11	NA	NA	42280	-27998	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAACTCGGGATGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	84362068	84361388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_84361555_84361911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004437	chr11	-	482	3	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	40417	27998	40354	-27998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAACTCGGGATGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	84363994	84361388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84361555_84361913_84362113_84363877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004438	chr11	-	420	3	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	3168	28636	3105	-28636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTATCCCAGCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	84401243	84362026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84362113_84363877_84363993_84401024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004439	chr11	-	253	2	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	3258	30478	3195	-30478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGAGCCATGGCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	84401153	84363868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84363993_84401024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004440	chr11	-	425	2	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	2006	67631	1943	-67631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGCTTTTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	84402405	84401021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84401244_84402202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004441	chr11	-	393	2	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	1254	68812	1191	-68812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTACACCTGAGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	84403157	84402202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84402405_84402966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004442	chr11	-	419	2	ISM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	64	69576	1	-69576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGACATTTTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	84404347	84402966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84403156_84404117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004443	chr11	-	383	1	ISM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	7726	0	7726	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCCCCCCCCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	84712064	84711681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84711700_84712100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004444	chr11	-	464	3	ISM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	7245	103	7245	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTACACCCTACCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	84712545	84711784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84712128_84712228_84712295_84712490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004445	chr11	-	704	1	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	37674	0	37582	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	84723890	84723186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84723200_84723900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004446	chr11	-	1166	3	ISM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	34310	0	34218	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	84727254	84723186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84724040_84725160_84725410_84727190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004447	chr11	-	858	3	ISM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	2079	-1	2079	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTCCCTTAGTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	84805113	84801774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_84802475_84804047_84804129_84805036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004448	chr11	-	702	1	NIC	ENSMUSG00000020526.13	novel	998	5	NA	NA	4715	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTCCCTTAGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	84802477	84801775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_84801800_84802500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004449	chr11	+	636	5	FSM	ENSMUSG00000018479.13	ENST00000269127.5	679	5	45	-2	20	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCATGCTGGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	85061941	85069232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_85062072_85063681_85063762_85064013_85064190_85064842_85064943_85069082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004450	chr11	-	361	1	Genic_Genomic	ENSMUSG00000018481.10	novel	NA	NA	NA	NA	47509	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCGATTGAATTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	85078447	85078086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_85078100_85078400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004451	chr11	-	541	3	ISM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	38997	4331	38997	-4331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCAAACCATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	85086959	85082418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_85082726_85085400_85085567_85086891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004452	chr11	+	1260	2	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	28319	405	28319	-405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTTTAAAATTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	85230388	85237487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_85230623_85236461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004453	chr11	+	1258	1	ISM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	34565	0	34565	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGGCGTTTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	85236634	85237892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_85236600_85237900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004454	chr11	-	1405	1	ISM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	45465	0	44461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	86102911	86101506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86101500_86102900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004455	chr11	+	830	3	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	8505	2542	8505	-2542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTATTATGCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	86383987	86387309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_86384053_86386053_86386156_86386646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004456	chr11	+	687	1	ISM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	13682	0	13682	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTAATTTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	86389164	86389851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_86389200_86389900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004457	chr11	-	1922	1	Genic_Genomic	ENSMUSG00000020516.16	novel	NA	NA	NA	NA	16853	7	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTTTCTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	86391611	86389689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_86389700_86391600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004458	chr11	-	3705	2	ISM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	41909	-11	14721	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTTTTTATTACTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86393743	86389829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86391610_86391818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004459	chr11	+	3667	2	NNC	ENSMUSG00000020521.8	novel	4452	9	NA	NA	14352	3863	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGTCTGAGGATTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	86389834	86393714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_86391605_86391817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004460	chr11	-	2133	3	ISM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	37861	-1304	10739	276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATTGAAGTGAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	86397725	86391877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86393789_86395091_86395205_86397616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004461	chr11	-	1921	3	ISM	ENSMUSG00000020516.16	ENST00000441215.2	1029	10	10771	-1499	10771	101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACACAGTGAGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	86397693	86392052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86393784_86395091_86395205_86397616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004462	chr11	-	1849	2	ISM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	40371	-1118	13249	90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGTAGATGGTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	86395215	86392063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86393789_86395091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004463	chr11	-	577	1	ISM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	42901	2457	15734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGCCTTAAGGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	86392730	86392153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86392200_86392700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004464	chr11	-	687	3	ISM	ENSMUSG00000020516.16	ENST00000406116.7	1950	15	37872	80	10764	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAATTGTAACAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	86397700	86392233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86392724_86395091_86395205_86397616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004465	chr11	+	1035	6	FSM	ENSMUSG00000020513.16	ENST00000539018.5	1046	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGTCTTGGACCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	86435833	86457952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_86436057_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004466	chr11	+	781	4	ISM	ENSMUSG00000020513.16	ENST00000376094.8	945	5	3	1329	3	-1257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGAACATAAGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	86440150	86456695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_86440298_86443613_86443831_86445898_86446131_86456510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004467	chr11	+	792	4	ISM	ENSMUSG00000020513.16	ENST00000376094.8	945	5	3469	0	3469	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGCTCAGTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	86443616	86458024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_86443831_86445898_86446131_86456510_86456695_86457862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004468	chr11	-	217	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	97237	1474	97237	-1474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCTTGAACTCAGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	86477425	86476164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86476278_86477321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004469	chr11	-	169	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	81764	2630	81764	-2630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGATCCCTCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86492898	86477320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86477425_86492833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004470	chr11	-	179	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	76544	18143	76544	-18143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAATTCCTTAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	86498118	86492833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86492896_86498001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004471	chr11	-	206	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	72410	23307	72410	-23307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGCTGAGTCACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86502252	86497997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86498119_86502167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004472	chr11	-	214	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	48529	27477	48529	-27477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGATTATATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	86526133	86502167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86502249_86526000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004473	chr11	-	224	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	40240	51317	40240	-51317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCACAAGTAAGAACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	86534422	86526007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86526133_86534323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004474	chr11	-	235	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	22600	59680	22600	-59680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGGAGTATCATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	86552062	86534370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86534492_86551948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004475	chr11	-	203	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	20263	77257	20263	-77257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCATGGCTTTCTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	86554399	86551947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86552060_86554308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004476	chr11	-	228	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	19046	79618	19046	-79618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGCTGTGTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	86555616	86554308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86554400_86555479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004477	chr11	-	239	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	17957	80789	17957	-80789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGAGCTTTCTTACTAC	NA	NA	NA	NA	NA	NA	NA	NA	86556705	86555479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86555616_86556602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004478	chr11	-	199	2	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	0	81912	0	-81912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGACCGTGTGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86574662	86556602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86556705_86574565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004479	chr11	+	369	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	27	2642	27	-2642	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTCTCATGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	86574837	86580641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_86574950_86580384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004480	chr11	+	374	1	Genic_Genomic	ENSMUSG00000072582.10	novel	NA	NA	NA	NA	8100	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGGTGTCTGATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	86582910	86583284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_86582900_86583300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004481	chr11	-	722	1	Genic_Genomic	ENSMUSG00000047126.18	novel	NA	NA	NA	NA	62422	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTATTTCTTTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	86585897	86585175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_86585200_86585900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004482	chr11	-	1626	2	ISM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	36507	0	29846	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGTATGTGGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86662065	86659671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86661088_86661855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004483	chr11	-	825	5	FSM	ENSMUSG00000018427.9	ENST00000585166.1	828	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTATCTGTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86868230	86831233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86868153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004484	chr11	-	747	4	NNC	ENSMUSG00000018427.9	novel	828	5	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTATCTGTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86862949	86831233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_86831515_86835398_86835508_86836760_86836803_86862634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004485	chr11	-	371	1	ISM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	39825	0	39825	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGATTCCAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	86925063	86924692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86924700_86925100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004486	chr11	-	463	3	ISM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	36171	1079	36171	-1079	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAACTGGCAACTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	86928717	86925771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_86926122_86926417_86926470_86928656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004487	chr11	+	900	2	ISM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	8432	1981	8432	-1981	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCACGGCTCAGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	87008491	87013480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87008671_87012759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004488	chr11	+	853	1	ISM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	14549	0	14549	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTCCATGTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	87014608	87015461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87014600_87015500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004489	chr11	+	766	1	ISM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	92841	0	92841	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTTGTTGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	87110743	87111509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87110700_87111500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004490	chr11	+	213	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	4295	17439	4295	-17439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCGTCTTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	87488017	87488559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87488112_87488440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004491	chr11	+	331	3	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	4725	14531	4725	-14531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATACCCACCTGTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	87488447	87491467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87488558_87489688_87489772_87491329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004492	chr11	+	234	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	7625	14308	7625	-14308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAGTGAGGGTGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	87491347	87491690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87491491_87491599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004493	chr11	+	207	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	7874	14007	7874	-14007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGGTGAGGCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	87491596	87491991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87491697_87491884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004494	chr11	+	262	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	8162	12617	8162	-12617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCACTGGGACTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	87491884	87493381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87491999_87493233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004495	chr11	+	286	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	9551	12264	9551	-12264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTGACTAGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	87493273	87493734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87493431_87493605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004496	chr11	+	247	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	9878	11672	9878	-11672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGTTCTCTTAGATATC	NA	NA	NA	NA	NA	NA	NA	NA	87493600	87494326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87493735_87494213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004497	chr11	+	239	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	10489	11061	10489	-11061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGACCGTACACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	87494211	87494937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87494326_87494812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004498	chr11	+	320	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	11112	10609	11112	-10609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTTCCCCTGCCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	87494834	87495389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87495009_87495243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004499	chr11	+	267	2	ISM	ENSMUSG00000018401.18	ENSMUST00000092802.12	5525	18	12247	11178	11569	-10048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTTCTGGTCGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87495291	87495950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87495430_87495821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004500	chr11	+	267	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	12117	4110	12117	-4110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCAGTCCTGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	87495839	87501888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87495977_87501758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004501	chr11	+	341	3	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	19279	1312	19279	-1312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACAAGTTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	87503001	87504686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87503143_87504247_87504359_87504597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004502	chr11	+	241	2	ISM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	20873	947	20873	-947	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCATTGCTACGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	87504595	87505051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87504687_87504901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004503	chr11	+	187	1	ISM	ENSMUSG00000018401.18	ENST00000579925.5	5525	18	23903	0	23222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTCTTTTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87506944	87507131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87506900_87507100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004504	chr11	+	1803	5	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	27498	3153	27498	-74	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTTCAGGGAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	87618220	87623212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004505	chr11	+	1954	4	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	29502	1055	29502	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTCCTCAAGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	87620224	87625310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87620388_87620957_87621061_87621852_87623212_87624981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004506	chr11	+	1934	3	ISM	ENSMUSG00000034177.16	ENST00000583753.5	2831	9	66480	-1	31132	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATCTGGCTTTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	87621854	87626361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87623212_87624981_87625330_87626132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004507	chr11	+	656	1	NIC	ENSMUSG00000034177.16	novel	3623	11	NA	NA	31910	2	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGTGAATTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	87622632	87623288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_87622600_87623300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004508	chr11	+	509	4	ISM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	685	10	685	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAACATACTTAAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	87629062	87634433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87629100_87633621_87633678_87633883_87633938_87634071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004509	chr11	+	345	1	ISM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	5721	0	5721	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGGGTACTGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87634098	87634443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87634100_87634400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004510	chr11	+	663	3	ISM	ENSMUSG00000034156.17	ENSMUST00000100644.10	7390	31	14912	9362	14912	-9358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGCTCCACCCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	87666324	87667392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87666480_87666798_87667165_87667250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004511	chr11	+	656	3	ISM	ENSMUSG00000034156.17	ENSMUST00000100644.10	7390	31	15384	8834	15384	-8830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACAGCCGCAACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	87666796	87667920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87667165_87667250_87667491_87667872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004512	chr11	+	761	3	ISM	ENSMUSG00000034156.17	ENSMUST00000100644.10	7390	31	16047	7621	16047	-7617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCCTGCTCCAGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	87667459	87669133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87667491_87667872_87668062_87668592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004513	chr11	+	673	2	ISM	ENSMUSG00000034156.17	ENST00000343736.9	7549	31	24419	238	24373	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATGCAGCTATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87675785	87676512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87676168_87676221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004514	chr11	+	506	5	ISM	ENSMUSG00000034121.13	ENST00000313863.11	1580	16	10	6475	10	-6475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCAGGACAGGCGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	87744063	87747465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004515	chr11	+	413	3	ISM	ENSMUSG00000034121.13	ENST00000678463.1	1714	17	8754	0	8754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAACTGGATGATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	87752807	87753940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87752945_87753566_87753665_87753762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004516	chr11	+	188	1	ISM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	10401	0	10388	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	87754441	87754629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87754400_87754600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004517	chr11	-	1073	1	ISM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	3415	0	3415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGGGGTTTCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	87871423	87870350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_87870400_87871400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004518	chr11	-	1421	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	60	995	60	-995	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGGGTGGGTTTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	87878299	87871345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_87872397_87874697_87874837_87878068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004519	chr11	+	2585	2	ISM	ENSMUSG00000018379.18	ENSMUST00000107920.10	1209	5	1239	-1412	1239	332	intron_retention	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAGTGGAACTCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	87939867	87942648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87940042_87940237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004520	chr11	+	2482	1	Genic_Genomic	ENSMUSG00000018379.18	novel	NA	NA	NA	NA	3477	6	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGTTCTCCATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	87942105	87944587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_87942100_87944600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004521	chr11	+	630	2	ISM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	10124	2855	10124	-2855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCTTAGTTGATTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87969228	87972700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87969382_87972223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004522	chr11	+	530	1	ISM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	15921	0	15921	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGACTGTTAATGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	87975025	87975555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87975000_87975600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004523	chr11	+	568	2	ISM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	1	24205	1	-24205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGCTCAACAACAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	87989972	88060761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_87990170_88060390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004524	chr11	+	598	2	ISM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	70541	16761	70541	-16761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGACCCCACCTCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	88060512	88068205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_88061001_88068095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004525	chr11	+	536	1	ISM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	94459	0	94459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCAGCGGCGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	88084430	88084966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_88084400_88085000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004526	chr11	+	1235	4	ISM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	777	0	764	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	88096013	88102333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_88096186_88100678_88100757_88100929_88101057_88101475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004527	chr11	+	858	1	ISM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	6262	0	6226	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	88101475	88102333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_88101500_88102300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004528	chr11	-	1873	1	ISM	ENSMUSG00000069769.14	ENST00000674964.1	6434	14	377031	0	72738	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTAGTGTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	88232080	88230207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_88230200_88232100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004529	chr11	-	1884	2	ISM	ENSMUSG00000069769.14	ENST00000674964.1	6434	14	371160	3410	66867	1097	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAATATTTTTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	88237951	88233617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_88235429_88237878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004530	chr11	-	343	4	FSM	ENSMUSG00000069769.14	ENST00000674898.1	334	4	0	-9	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATCACGGACATGCT	NA	NA	NA	NA	NA	NA	NA	NA	88304818	88272402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_88272471_88276870_88276946_88285390_88285506_88304733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004531	chr11	-	1345	6	ISM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	19513	0	19513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88826778	88814845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004532	chr11	+	2029	4	FSM	ENSMUSG00000110344.2	ENSMUST00000134929.8	2031	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCAATCTTTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	90078511	90142081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_90079062_90099809_90099873_90139630_90140562_90141596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004533	chr11	+	1649	5	ISM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	10476	561	10476	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGCTGACTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	90150777	90168854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004534	chr11	+	1387	1	Genic_Genomic	ENSMUSG00000003948.18	novel	NA	NA	NA	NA	27730	3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAGAGTAATGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	90168031	90169418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_90168000_90169400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004535	chr11	-	2291	1	ISM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	50044	2025	48840	1	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCCGGTCTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	90231677	90229386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90229400_90231700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004536	chr11	-	2807	3	ISM	ENSMUSG00000003949.17	ENST00000573945.5	3066	4	1562	171	1562	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTAAGGTTGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	90278955	90229558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90231801_90236583_90236805_90278611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004537	chr11	-	1649	1	ISM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	159944	0	159925	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCTAGATTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	90368966	90367317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90367300_90369000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004538	chr11	+	623	3	ISM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	40	1152	40	-882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACTGAATATAAACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	90529038	90534605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_90529379_90531202_90531359_90534478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004539	chr11	+	486	2	ISM	ENSMUSG00000020544.15	ENSMUST00000099960.3	773	3	3483	-76	3483	76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGAAAAGATGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	90534486	90535563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_90534605_90535195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004540	chr11	+	393	1	Genic_Genomic	ENSMUSG00000020544.15	novel	NA	NA	NA	NA	4362	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGCCTGACAACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	90535365	90535758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_90535400_90535800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004541	chr11	-	243	3	ISM	ENSMUSG00000020541.13	ENST00000536554.5	1271	13	37696	-4	13112	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGAGACACCAGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	90540713	90537661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90537726_90540173_90540241_90540601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004542	chr11	-	137	2	ISM	ENSMUSG00000020541.13	ENSMUST00000107867.8	2439	9	13575	1150	13575	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGTAAGAGACACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90540250	90537665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90537726_90540173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004543	chr11	+	177	2	Antisense	novelGene_ENSMUSG00000020541.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGAAGAAAGTACAACA	NA	NA	NA	NA	NA	NA	NA	NA	90540173	90540711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_+_90540239_90540599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004544	chr11	-	229	3	ISM	ENSMUSG00000020541.13	ENST00000536554.5	1271	13	35621	2511	11037	-2511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTAAGTCATTTATACAA	NA	NA	NA	NA	NA	NA	NA	NA	90542788	90540176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90540241_90540601_90540715_90542736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004545	chr11	-	377	4	ISM	ENSMUSG00000020541.13	ENSMUST00000107867.8	2439	9	5168	4092	5168	-2942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAGCCTACCCTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	90548657	90540607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90540715_90542736_90542789_90547176_90547277_90548539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004546	chr11	-	406	4	ISM	ENSMUSG00000020541.13	ENSMUST00000107867.8	2439	9	1101	10677	1101	-9527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATACCCACCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	90552724	90547192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90547277_90548539_90548658_90548973_90549035_90552581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004547	chr11	-	320	3	ISM	ENSMUSG00000020541.13	ENST00000536554.5	1271	13	16375	11308	-8209	-11308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGATTAGAAACGCCC	NA	NA	NA	NA	NA	NA	NA	NA	90562034	90548973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90549035_90552581_90552716_90561909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004548	chr11	-	314	3	ISM	ENSMUSG00000020541.13	ENST00000536554.5	1271	13	14644	14960	-9940	9282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGAACGAGGATCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	90563765	90552625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90552716_90561909_90562027_90563658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004549	chr11	-	659	6	ISM	ENSMUSG00000020541.13	ENST00000572405.5	745	7	2458	-1	2436	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGGGACAGTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	90575969	90561906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004550	chr11	-	282	3	ISM	ENSMUSG00000020541.13	ENST00000572158.5	1430	15	4285	26874	4265	-2632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTCAATTCCCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	90574140	90564539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90564613_90565495_90565625_90574060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004551	chr11	-	297	3	ISM	ENSMUSG00000020541.13	ENST00000572158.5	1430	15	2447	27832	2427	-3590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGTCTGTCGACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	90575978	90565497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_90565625_90574060_90574140_90575887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004552	chr11	+	3720	5	ISM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	24473	12	24473	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTAAAGTTAAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	93820454	93837791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004553	chr11	+	3206	1	ISM	ENSMUSG00000059474.14	ENSMUST00000107853.8	5245	16	57923	5	38619	1	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTTATCAATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	93834600	93837806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_93834600_93837800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004554	chr11	-	1017	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTCAGTACTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	93847086	93840635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004555	chr11	-	1001	5	NNC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	93847083	93840639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_93840873_93842725_93842839_93843634_93843728_93846320_93846451_93846651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004556	chr11	-	232	1	NIC	ENSMUSG00000020857.12	novel	1012	5	NA	NA	5735	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGCAGTGTTCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	93840874	93840642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_93840600_93840900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004557	chr11	-	461	3	ISM	ENSMUSG00000020857.12	ENSMUST00000072566.5	734	4	21	2105	21	-2105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCATTCAAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	93846588	93842747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_93842839_93843625_93843728_93846320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004558	chr11	-	942	1	Genic_Genomic	ENSMUSG00000037601.12	novel	NA	NA	NA	NA	10353	1	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTGTAGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	93848745	93847803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_93847800_93848700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004559	chr11	-	1530	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	37	1614	37	-1614	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGTTCAGAGTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	93859310	93849418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004560	chr11	+	542	3	ISM	ENSMUSG00000020859.17	ENST00000510283.5	4667	27	53066	24604	52850	-24604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGTACCAGTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	93988040	93989976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_93988263_93988506_93988703_93989852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004561	chr11	+	546	1	ISM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	127107	2330	78845	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGGAGGGGACACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94014035	94014581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_94014000_94014600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004562	chr11	+	1376	2	FSM	ENSMUSG00000037573.6	ENST00000268957.3	1360	2	-2	-14	-2	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAACATGTATCGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	94101077	94105568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_94101197_94104311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004563	chr11	-	1245	2	Antisense	novelGene_ENSMUSG00000037573.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCTGTCTGGTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94105513	94101147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_94101195_94104315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004564	chr11	+	802	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	25	1461	25	-694	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCGGAGGCCCAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	94102304	94104860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_94102558_94104311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004565	chr11	+	1266	1	NIC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	2031	22	mono-exon	FALSE	NA	NA	NA	NA	NA	763	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATCGTACAAGTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	94104310	94105576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_94104300_94105600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004566	chr11	+	584	1	ISM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	3458	0	3458	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATCCTGTGGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	94105737	94106321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_94105700_94106300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004567	chr11	+	486	1	Genic_Genomic	ENSMUSG00000020864.14	novel	NA	NA	NA	NA	13103	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCATTCTCTCTCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94232182	94232668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_94232200_94232700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004568	chr11	-	433	1	ISM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	8969	0	8969	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGCGTAGCTCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	94431056	94430623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94430600_94431100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004569	chr11	-	478	3	ISM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	4496	3775	4496	-3775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGAAAGCTGGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	94435529	94434398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94434529_94434930_94434995_94435245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004570	chr11	+	1663	4	FSM	ENSMUSG00000039084.9	ENST00000258969.4	1661	4	2	-4	2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCACCTCCTCTCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	94455894	94459947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_94456695_94458623_94458788_94459034_94459192_94459405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004571	chr11	+	592	4	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	65	10210	65	-10210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACAAGGTAAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	94520657	94525832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004572	chr11	+	935	4	ISM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	5155	1330	5155	-1330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCATAAACCCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94525747	94534712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_94525843_94529356_94529430_94532045_94532220_94534119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004573	chr11	+	626	1	Genic_Genomic	ENSMUSG00000020869.9	novel	NA	NA	NA	NA	14825	1	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTCCTTTGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	94535417	94536043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_94535400_94536000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004574	chr11	-	813	2	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	4938	-4	4938	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTTGGAGGAAGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	94536840	94535817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94536432_94536641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004575	chr11	-	613	1	NIC	ENSMUSG00000039055.5	novel	2138	8	NA	NA	5344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	94536434	94535821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_94535800_94536400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004576	chr11	-	1014	5	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	2964	102	2964	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAGCTAGGGAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	94538814	94535923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538609_94538769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004577	chr11	-	1014	4	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	3	2998	3	-2998	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGGAAAGCATTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	94541775	94538819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94538889_94538968_94539056_94540833_94540965_94541048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004578	chr11	-	729	2	ISM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	151	4993	151	-4993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTTCCCCTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	94541627	94540814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94540965_94541048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004579	chr11	+	758	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGGGACAGGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	94544592	94550917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004580	chr11	+	484	1	Genic_Genomic	ENSMUSG00000024414.14	novel	NA	NA	NA	NA	5841	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGGGACAGGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	94550433	94550917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_94550400_94550900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004581	chr11	+	1125	1	ISM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	14740	0	9711	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGCCTGGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	94896600	94897725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_94896600_94897700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004582	chr11	+	845	4	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	130	6103	130	-6103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGGCTCCCCAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	94900834	94910810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_94901403_94905177_94905233_94910186_94910354_94910755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004583	chr11	+	846	2	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	13609	792	13609	-792	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGAGGGGGAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	94914313	94916121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_94914442_94915403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004584	chr11	+	826	1	ISM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	15383	0	15383	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCTTCTTGTCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	94916087	94916913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_94916100_94916900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004585	chr11	-	916	1	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	14181	0	14181	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGGCTTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	94917999	94917083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94917100_94918000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004586	chr11	-	889	2	ISM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	13375	291	13375	-291	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTAGCTGCTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	94918805	94917374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94918149_94918690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004587	chr11	-	1292	1	NIC	ENSMUSG00000001507.17	novel	4636	25	NA	NA	23433	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTGCTCCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	94936591	94935299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_94935300_94936600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004588	chr11	-	204	2	ISM	ENSMUSG00000001507.17	ENSMUST00000107739.8	4636	25	15885	7969	15885	-7969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCTGGGTTTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	94944139	94943268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94943384_94944050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004589	chr11	-	206	2	ISM	ENSMUSG00000001507.17	ENSMUST00000107739.8	4636	25	11178	12795	11178	-12795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGGCCCTCTCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	94948846	94948094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94948247_94948792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004590	chr11	-	258	2	ISM	ENSMUSG00000001507.17	ENSMUST00000107739.8	4636	25	3215	18711	3215	-18711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAATATAGCTACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	94956809	94954010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_94954048_94956588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004591	chr11	+	2419	3	FSM	ENSMUSG00000001510.9	ENSMUST00000092768.7	2607	3	35	153	35	-153	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACGTGGTGGGTCTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	95010979	95015969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_95011473_95012533_95012725_95014234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004592	chr11	+	1829	1	ISM	ENSMUSG00000001510.9	ENSMUST00000092768.7	2607	3	3349	0	3349	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGTACTCTTTGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	95014293	95016122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95014300_95016100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004593	chr11	-	965	1	ISM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	34379	0	34379	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	95166049	95165084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_95165100_95166000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004594	chr11	-	1023	3	ISM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	32045	802	32045	429	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGCAGAAAATGCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	95168383	95165886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_95166714_95167268_95167376_95168294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004595	chr11	-	283	2	ISM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	6291	25856	6291	-24442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATGAGAGCATTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	95194137	95190940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_95191045_95193958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004596	chr11	+	870	6	ISM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	2515	0	2515	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	95278032	95282602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004597	chr11	+	539	4	ISM	ENSMUSG00000038845.12	ENST00000355202.9	983	7	1016	4351	1016	-4351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTTCACGGGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	95558860	95566512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95558978_95562212_95562375_95565967_95566111_95566395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004598	chr11	+	507	4	ISM	ENSMUSG00000038845.12	ENST00000355202.9	983	7	4367	1903	4367	-1903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGAAAAGGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	95562211	95568960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95562375_95565967_95566111_95566395_95566513_95568876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004599	chr11	+	874	4	ISM	ENSMUSG00000038845.12	ENST00000504124.6	1735	7	8231	361	8221	272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGGGCCAGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95566065	95571135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95566111_95566395_95566513_95568876_95568973_95570519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004600	chr11	+	791	1	Genic_Genomic	ENSMUSG00000038845.12	novel	NA	NA	NA	NA	12967	3	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGTGTTTTCAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95570811	95571602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_95570800_95571600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004601	chr11	+	2116	3	FSM	ENSMUSG00000050860.7	ENST00000413580.5	2107	3	-2	-7	-2	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTTGTTCTCTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	95715354	95722970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_95715649_95719491_95719602_95721258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004602	chr11	+	554	3	FSM	ENSMUSG00000038811.14	ENST00000300406.6	544	3	-5	-5	-5	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCACACCCATCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95735856	95736824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_95735967_95736308_95736689_95736760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004603	chr11	+	545	3	NNC	ENSMUSG00000038811.14	novel	544	3	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCCCACACCCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95735861	95736822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_95735967_95736308_95736687_95736760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004604	chr11	+	543	3	NNC	ENSMUSG00000038811.14	novel	544	3	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCCCACACCCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95735861	95736822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_95735967_95736308_95736685_95736760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004605	chr11	-	479	2	Antisense	novelGene_ENSMUSG00000038811.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGTCCTGACGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	95736688	95735866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_95735964_95736306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004606	chr11	+	445	2	NNC	ENSMUSG00000038811.14	novel	544	3	NA	NA	438	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCCCACACCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	95736299	95736820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_95736685_95736760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004607	chr11	+	438	2	NNC	ENSMUSG00000038811.14	novel	544	3	NA	NA	446	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCCCACACCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	95736307	95736820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_95736689_95736763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004608	chr11	+	275	3	ISM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	8	8023	8	-8023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCCTGTAAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	95925798	95930233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95925894_95926144_95926196_95930104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004609	chr11	+	219	2	ISM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	4324	5716	4324	-5716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCGGAATGGAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	95930114	95932540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95930244_95932450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004610	chr11	+	174	2	ISM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	8439	2169	8439	-2169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCAATATGGATCACACT	NA	NA	NA	NA	NA	NA	NA	NA	95934229	95936087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95934303_95935986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004611	chr11	+	186	2	ISM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	10276	1107	10196	-1107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGAGACGGAGCGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	95935986	95937149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95936129_95937105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004612	chr11	+	169	1	ISM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	12377	0	12297	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTTCCCCCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	95938087	95938256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_95938100_95938300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004613	chr11	-	744	1	Genic_Genomic	ENSMUSG00000006057.16	novel	NA	NA	NA	NA	5443	1	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTCCAATTTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	95960420	95959676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_95959700_95960400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004614	chr11	-	1063	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	3	-470	3	467	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGAGAGACCTGTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	95966442	95963345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004615	chr11	-	179	1	ISM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	2506	4134	1873	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95963990	95963811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_95963800_95964000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004616	chr11	-	389	3	ISM	ENSMUSG00000006057.16	ENST00000506855.1	456	4	614	46	2	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTGGTGCTGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95965861	95963883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_95964045_95964348_95964528_95965812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004617	chr11	-	183	2	ISM	ENSMUSG00000006057.16	ENSMUST00000107686.8	691	5	5	2014	5	-1989	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAGCTCTGGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	95966402	95965826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_95965860_95966252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004618	chr11	+	744	2	FSM	ENSMUSG00000056648.6	ENST00000576562.1	743	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGGGCCCGGACTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	96173788	96175311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_96174213_96174991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004619	chr11	-	243	2	FSM	ENSMUSG00000085645.2	ENST00000466037.6	240	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCCATTACCCACACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	96191730	96184278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_96184381_96191589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004620	chr11	+	1866	5	FSM	ENSMUSG00000048763.12	ENST00000489475.5	1800	5	1	-67	1	-36	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTAGAGTCCTGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	96205389	96237297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_96205726_96214089_96214272_96231889_96231978_96235188_96235523_96236371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004621	chr11	+	1352	5	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	226	-219	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGCCGCCCCCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	96205614	96237011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_96205726_96214089_96214272_96231892_96231978_96235188_96235523_96236371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004622	chr11	+	1349	4	NNC	ENSMUSG00000048763.12	novel	1800	5	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCGGGCTGGGGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	96214200	96237230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_96214272_96231889_96231978_96235188_96235523_96236374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004623	chr11	+	1162	1	ISM	ENSMUSG00000048763.12	ENST00000472863.5	1919	4	38683	0	2001	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTTCTCTCCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	96236595	96237757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96236600_96237800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004624	chr11	+	432	2	ISM	ENSMUSG00000057058.17	ENSMUST00000071510.14	1425	12	289401	0	289347	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTATGGTGGGGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	96644853	96649767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96644966_96649447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004625	chr11	-	1982	2	ISM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	6680	-1	6680	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAAAGCCCTGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	96661677	96658379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_96660149_96661464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004626	chr11	+	1096	3	ISM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	11643	502	11521	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCAGCGTGGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	96691595	96694293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96691774_96692254_96692433_96693553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004627	chr11	+	512	3	ISM	ENSMUSG00000018666.14	ENSMUST00000079702.4	912	5	12191	107	12191	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATAATTGCTGAACATA	NA	NA	NA	NA	NA	NA	NA	NA	96692265	96699259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96692433_96693553_96693649_96699009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004628	chr11	+	922	1	Genic_Genomic	ENSMUSG00000018666.14	novel	NA	NA	NA	NA	13820	21	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGTGTCCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	96693894	96694816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_96693900_96694800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004629	chr11	-	2859	1	Genic_Genomic	ENSMUSG00000038615.18	novel	NA	NA	NA	NA	3725	1	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCCCCCCTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	96711097	96708238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_96708200_96711100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004630	chr11	-	2838	4	FSM	ENSMUSG00000038615.18	ENST00000536222.5	2164	4	206	-880	206	-105	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGTGACATCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	96714616	96709112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004631	chr11	+	657	6	ISM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	4183	0	4183	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTTTCTTGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96744884	96752029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004632	chr11	+	345	1	NIC	ENSMUSG00000018672.16	novel	930	9	NA	NA	10983	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTTTCTTGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96751684	96752029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_96751700_96752000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004633	chr11	-	1166	4	ISM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	6466	-1	6466	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCACCTTTACTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	96800856	96798250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004634	chr11	-	528	5	ISM	ENSMUSG00000018659.13	ENST00000225573.5	755	6	1424	-1	1422	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96833362	96829733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_96829910_96830080_96830152_96830841_96830896_96831681_96831782_96833235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004635	chr11	-	804	6	FSM	ENSMUSG00000018659.13	ENST00000434554.7	830	6	27	-1	25	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGAATGTTGGGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	96834759	96829733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96831681_96831782_96833235_96833361_96834556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004636	chr11	-	438	1	ISM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	15880	8053	6834	3	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCCCACCCCACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	96852657	96852219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_96852200_96852700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004637	chr11	-	622	3	NNC	ENSMUSG00000018678.14	novel	834	3	NA	NA	2	-214	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGCCATCACCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	96868588	96852436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_96852836_96854186_96854268_96868446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004638	chr11	+	3468	2	FSM	ENSMUSG00000038560.8	ENSMUST00000047997.8	3546	2	14	64	14	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGGCGAGGAGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	96904233	96915496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_96904437_96912231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004639	chr11	+	3330	1	NIC	ENSMUSG00000038560.8	novel	3546	2	NA	NA	2672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACACTCTCGCTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96912230	96915560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_96912200_96915600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004640	chr11	+	293	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	2	3366	2	-3366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGGACTTAGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	96920765	96921418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96920882_96921241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004641	chr11	+	352	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	477	2902	477	-2902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTAGAGAGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96921240	96921882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96921416_96921705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004642	chr11	+	398	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	935	1661	935	-1661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGTAGAGCCTGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	96921698	96923123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96921888_96922914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004643	chr11	+	316	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	2222	1017	2222	-1017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGTGAGATGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	96922985	96923767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96923115_96923580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004644	chr11	+	324	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	2877	727	2877	-727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGTGAAGGGGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	96923640	96924057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96923797_96923889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004645	chr11	+	340	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	3124	468	3124	-468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCAGGTAACCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	96923887	96924316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96924056_96924144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004646	chr11	+	298	2	ISM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	3536	21	3536	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATCTCCTTCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	96924299	96924763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_96924326_96924491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004647	chr11	+	267	1	Genic_Genomic	ENSMUSG00000020877.12	novel	NA	NA	NA	NA	3756	2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATCTCAAGTCTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	96924519	96924786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_96924500_96924800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004648	chr11	+	1706	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	96932387	96940039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004649	chr11	+	1136	1	NIC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	6483	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	96938903	96940039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_96938900_96940000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004650	chr11	-	1881	1	Genic_Genomic	ENSMUSG00000001440.6	novel	NA	NA	NA	NA	26288	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTGCTTCGTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97052419	97050538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_97050500_97052400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004651	chr11	-	252	1	ISM	ENSMUSG00000001441.14	ENSMUST00000167806.8	2307	18	74393	0	61583	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97096919	97096667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97096700_97096900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004652	chr11	-	311	3	ISM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	67451	1318	54489	-1318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGTACCTCCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	97104013	97097987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97098095_97103105_97103154_97103857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004653	chr11	-	366	2	ISM	ENSMUSG00000001441.14	ENSMUST00000172108.8	2924	22	57399	12664	44505	-12662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTATTGTAATAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	97113997	97109331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97109477_97113776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004654	chr11	-	458	4	ISM	ENSMUSG00000001441.14	ENST00000611212.1	1167	11	26631	0	26631	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTTTAATTTTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	97131871	97125870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97125942_97126890_97126996_97128919_97129085_97131754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004655	chr11	-	415	4	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	25635	3037	25627	-3037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTATACTTTGCAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	97132875	97128917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97129085_97131754_97131870_97132629_97132664_97132776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004656	chr11	-	482	4	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	24880	5885	24872	-5885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACTATGGTATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	97133630	97131765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97131870_97132629_97132664_97132776_97132874_97133383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004657	chr11	-	519	4	ISM	ENSMUSG00000001441.14	ENST00000569955.2	1165	11	19361	6894	19353	-6894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAATTTCATTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	97139149	97132774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97132874_97133383_97133630_97135253_97135362_97139083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004658	chr11	-	299	2	ISM	ENSMUSG00000001441.14	ENSMUST00000167806.8	2307	18	37681	36110	24871	-6897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAGTAAATTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	97133631	97132777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97132874_97133428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004659	chr11	-	362	3	ISM	ENSMUSG00000001441.14	ENST00000620148.2	1482	12	32158	7602	19376	-7594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACACCCCTGTTGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	97139126	97133474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97133630_97135253_97135362_97139027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004660	chr11	-	425	3	ISM	ENSMUSG00000001441.14	ENST00000620148.2	1482	12	-1	23224	-1	-23216	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACATGCCTTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	97171285	97149096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97149178_97158420_97158506_97171026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004661	chr11	+	601	4	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	18	5971	18	-5971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGACACCCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	97206559	97214775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004662	chr11	+	901	3	ISM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	11061	867	11061	-867	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAATTATAGGCCGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	97217602	97219879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_97217758_97218911_97219086_97219307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004663	chr11	+	620	1	Genic_Genomic	ENSMUSG00000018882.13	novel	NA	NA	NA	NA	13588	3	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGCTTAAAATTACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	97220129	97220749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_97220100_97220700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004664	chr11	-	1977	1	FSM	ENSMUSG00000043439.6	ENSMUST00000052281.6	2314	1	339	-2	339	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCGAGGTCCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97520189	97518212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_97518200_97520200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004665	chr11	+	743	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTGTGGTCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	97576776	97579451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_97577042_97577326_97577447_97579093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004666	chr11	-	290	1	ISM	ENSMUSG00000018537.17	ENSMUST00000179765.8	2485	11	9356	916	2379	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTGTGTGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	97580854	97580564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97580600_97580900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004667	chr11	-	370	2	ISM	ENSMUSG00000018537.17	ENSMUST00000103149.9	817	5	1364	280	1364	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTTCGAACTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	97581869	97580897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97581185_97581786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004668	chr11	+	762	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGCCTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97594229	97604327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004669	chr11	-	2029	2	ISM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	18424	-2	18408	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTAGAGCGATCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	97638958	97636438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97638296_97638786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004670	chr11	-	1858	1	Genic_Genomic	ENSMUSG00000018541.11	novel	NA	NA	NA	NA	19070	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTAGAGCGATCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	97638296	97636438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_97636400_97638300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004671	chr11	-	248	1	Genic_Genomic	ENSMUSG00000071415.7	novel	NA	NA	NA	NA	4665	2	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAGTGCTTGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	97668598	97668350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_97668400_97668600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004672	chr11	-	443	3	ISM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	969	444	969	-444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCATGACCTTCATGACC	NA	NA	NA	NA	NA	NA	NA	NA	97672294	97668796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97668991_97669090_97669205_97672159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004673	chr11	-	271	3	ISM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	546	796	546	-796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTTACTTTGAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	97672717	97669148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97669205_97672159_97672289_97672631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004674	chr11	-	196	2	NNC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	562	-3807	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGGGGAGGAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	97672701	97672159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_97672286_97672631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004675	chr11	-	274	3	ISM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	1	3839	1	-3839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAGGCAAACCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	97673262	97672191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97672289_97672631_97672716_97673169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004676	chr11	+	1849	4	ISM	ENSMUSG00000038366.16	ENST00000433206.6	1259	6	25333	-1039	25274	1039	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCTTCAAAGCTGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	97715664	97728374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_97715776_97724371_97724529_97724909_97725014_97726897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004677	chr11	+	1526	1	Genic_Genomic	ENSMUSG00000038366.16	novel	NA	NA	NA	NA	37675	1	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCTTCTTCCTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	97728065	97729591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_97728100_97729600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004678	chr11	+	2199	2	FSM	ENSMUSG00000050538.9	ENSMUST00000155954.3	2181	2	-1	-17	-1	17	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAACTCTAGCTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	97732124	97734942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_97732391_97733009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004679	chr11	+	864	1	ISM	ENSMUSG00000050538.9	ENSMUST00000155954.3	2181	2	890	1046	871	10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAATGAATAATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	97733015	97733879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_97733000_97733900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004680	chr11	+	737	6	FSM	ENSMUSG00000017404.13	ENSMUST00000092425.11	737	6	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTGCTGTGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	97917537	97921320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_97917589_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004681	chr11	+	752	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97917749	97921319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004682	chr11	+	736	6	NNC	ENSMUSG00000017404.13	novel	751	6	NA	NA	9	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97917758	97921319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004683	chr11	+	607	5	NNC	ENSMUSG00000017404.13	novel	737	6	NA	NA	968	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97918717	97921319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_97918756_97919171_97919295_97920220_97920342_97920609_97920712_97921096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004684	chr11	+	600	5	NNC	ENSMUSG00000017404.13	novel	737	6	NA	NA	983	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97918732	97921319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_97918760_97919176_97919295_97920220_97920342_97920600_97920712_97921096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004685	chr11	+	589	4	ISM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	1411	-1	1411	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCTGCTGTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	97919160	97921319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_97919295_97920220_97920342_97920600_97920712_97921096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004686	chr11	-	1034	1	Genic_Genomic	ENSMUSG00000017400.11	novel	NA	NA	NA	NA	15807	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGCTTGGTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	97928481	97927447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_97927400_97928500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004687	chr11	-	1167	2	ISM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	13706	419	13706	-419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTTGGCCACCATCA	NA	NA	NA	NA	NA	NA	NA	NA	97930582	97927867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97928897_97930444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004688	chr11	-	771	1	Genic_Genomic	ENSMUSG00000020883.19	novel	NA	NA	NA	NA	66257	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTTCATTTCCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	97974150	97973379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_97973400_97974200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004689	chr11	-	315	2	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	59484	0	58717	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGGGGTGGCCCACCATG	NA	NA	NA	NA	NA	NA	NA	NA	97981690	97980416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97980525_97981483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004690	chr11	-	109	1	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	59882	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGGGGTGGCCCACCATG	NA	NA	NA	NA	NA	NA	NA	NA	97980525	97980416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_97980400_97980500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004691	chr11	-	232	2	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	58145	1107	57378	-1107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGCAGATCACCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	97983029	97981523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97981697_97982970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004692	chr11	-	294	4	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	53289	2554	52522	-2554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTGACTTCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	97987885	97982970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97983028_97983938_97983984_97985958_97986020_97987754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004693	chr11	-	243	3	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	51851	5569	51084	-5569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGGCTTCACTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	97989323	97985985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97986020_97987754_97987886_97989245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004694	chr11	-	204	2	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	50237	8829	49470	-8829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACCCCGTACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	97990937	97989245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97989321_97990808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004695	chr11	-	299	3	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	40779	10392	40012	-10392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGCTCTGTGTAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	98000395	97990808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97990936_97992526_97992623_98000319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004696	chr11	-	262	3	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	39317	12110	38550	-12110	internal_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTCTTATAATATGC	NA	NA	NA	NA	NA	NA	NA	NA	98001857	97992526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_97992623_98000319_98000389_98001760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004697	chr11	-	204	3	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	37052	19939	36285	-19939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGTCTCAACGGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	98004122	98000355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98000389_98001760_98001856_98004046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004698	chr11	-	198	3	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	34899	21373	34132	-21373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGGAGTAGGAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	98006275	98001789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98001856_98004046_98004122_98006218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004699	chr11	-	320	3	ISM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	31	25801	31	-25801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACGGTTGACATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	98041143	98006217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98006274_98019140_98019203_98040941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004700	chr11	-	1036	3	ISM	ENSMUSG00000018160.16	ENST00000394287.7	2815	18	32245	182	31911	-182	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGAGCAATGGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98051870	98043164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98043952_98049154_98049296_98051762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004701	chr11	+	366	2	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	48	8757	48	-8757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGGATCCATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	98249241	98263168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98249335_98262895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004702	chr11	+	434	3	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	13699	5544	13699	-5544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCCATCTGCGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98262892	98266381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98263169_98265905_98265984_98266301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004703	chr11	+	273	3	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	17306	4248	17306	-4248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCTGCTGGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	98266499	98267677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98266555_98267315_98267434_98267577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004704	chr11	+	282	3	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	20368	1032	20368	-1032	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCACGGCAGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	98269561	98270893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98269644_98269719_98269825_98270798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004705	chr11	+	397	3	ISM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	20593	377	20593	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAACAGGGTCCTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98269786	98271548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98269825_98270798_98270893_98271283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004706	chr11	+	297	1	Genic_Genomic	ENSMUSG00000018167.11	novel	NA	NA	NA	NA	22445	10	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTGTGATGGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	98271638	98271935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_98271600_98271900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004707	chr11	+	585	3	FSM	ENSMUSG00000007877.3	ENST00000578283.1	579	3	-4	-2	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTAGGTGTCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	98274665	98275515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_98274783_98274977_98275035_98275104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004708	chr11	+	683	1	ISM	ENSMUSG00000007877.3	ENSMUST00000008021.3	948	2	460	0	427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTTCTCTCTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	98275096	98275779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98275100_98275800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004709	chr11	-	657	4	FSM	ENSMUSG00000038208.14	ENST00000579146.5	653	4	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGGTTTGGACCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98291261	98280742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_98280928_98288721_98288875_98289710_98289809_98291040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004710	chr11	-	509	4	FSM	ENSMUSG00000038208.14	ENST00000619169.4	512	4	4	-1	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGGGGTTTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	98282580	98280745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_98280928_98281112_98281318_98281905_98281968_98282520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004711	chr11	-	489	4	NNC	ENSMUSG00000038208.14	novel	512	4	NA	NA	28	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGGGGTTTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	98282556	98280745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_98280928_98281108_98281318_98281905_98281968_98282520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004712	chr11	+	669	4	ISM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	24	14477	24	-14477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATGTCCATGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	98303398	98313017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004713	chr11	+	1205	2	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	23458	453	23379	-453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGAGAGTGGTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	98326753	98328089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98327008_98327138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004714	chr11	+	1041	1	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	24206	0	24127	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTAATTACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	98327501	98328542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98327500_98328500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004715	chr11	-	736	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	12	-1	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGTGTTTATGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98329805	98328532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004716	chr11	-	435	1	ISM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	846	3	816	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGGCGTGTGTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	98328971	98328536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98328500_98329000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004717	chr11	+	728	2	FSM	ENSMUSG00000084835.2	ENSMUST00000154452.2	760	2	32	0	32	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGCCCTCTGCCGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	98328894	98329872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_98329543_98329792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004718	chr11	-	232	2	ISM	ENSMUSG00000002580.8	ENST00000577810.1	618	3	236	263	236	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTCCGCTAGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	98329551	98328986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98329140_98329472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004719	chr11	+	222	2	ISM	ENSMUSG00000019312.11	ENST00000394204.1	1523	13	-12	3923	-12	-3923	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGAGCTCTGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	98341581	98341908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98341749_98341853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004720	chr11	+	228	2	ISM	ENSMUSG00000019312.11	ENST00000394204.1	1523	13	1353	1745	1353	-1745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCACTGACTTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	98342946	98344086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98343095_98344006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004721	chr11	+	208	1	ISM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	8332	0	4398	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	98345991	98346199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98346000_98346200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004722	chr11	-	1196	5	FSM	ENSMUSG00000018168.9	ENST00000377958.6	1197	5	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAATGCGAGGGTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	98407761	98357803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98379677_98379846_98407676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004723	chr11	-	1051	3	FSM	ENSMUSG00000018168.9	ENST00000377945.7	1053	3	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAATGCGAGGGTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	98407760	98357803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_98358513_98381157_98381416_98407676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004724	chr11	-	710	1	NIC	ENSMUSG00000018168.9	novel	3658	8	NA	NA	49250	1	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAATGCGAGGGTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	98358513	98357803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_98357800_98358500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004725	chr11	-	897	2	NNC	ENSMUSG00000018168.9	novel	1053	3	NA	NA	26412	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAATGCGAGGGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98381351	98357804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_98358508_98381157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004726	chr11	-	1029	4	FSM	ENSMUSG00000018168.9	ENST00000377944.7	1029	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAATGCGAGGGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98407763	98357804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98407676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004727	chr11	-	797	2	ISM	ENSMUSG00000018168.9	ENST00000350532.7	1331	5	31269	-1	31269	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTCAATGCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	98376494	98357810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98358513_98376399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004728	chr11	-	1114	4	ISM	ENSMUSG00000018168.9	ENST00000467757.5	1280	5	26346	81	26346	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGGCTATCGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98381417	98357892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98358513_98367752_98367870_98376399_98376517_98381157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004729	chr11	-	858	3	ISM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	26343	274	26343	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTCCCTCGCTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	98381420	98358085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98358513_98379677_98379846_98381157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004730	chr11	-	562	3	FSM	ENSMUSG00000018168.9	ENST00000394189.6	912	3	10	340	10	-333	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTACCAGCAAAGCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	98407753	98358144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_98358513_98367752_98367870_98407676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004731	chr11	-	616	4	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	31246	465	31246	-458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGATGGAAAAGAAACGG	NA	NA	NA	NA	NA	NA	NA	NA	98376517	98358269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98358513_98367752_98367870_98367967_98368106_98376399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004732	chr11	-	548	4	ISM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	27917	9941	27917	-9934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACGGCCCTCTCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	98379846	98367745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98367870_98367967_98368106_98376399_98376517_98379677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004733	chr11	-	458	3	ISM	ENSMUSG00000018168.9	ENST00000350532.7	1331	5	26402	18619	26402	-18619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAGAACCCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	98381361	98376430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98376517_98379677_98379846_98381157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004734	chr11	-	477	3	ISM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	-2	21904	-2	-21904	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGCGCTCACGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	98407765	98379715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98379846_98381157_98381416_98407676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004735	chr11	-	625	1	Genic_Genomic	ENSMUSG00000038150.8	novel	NA	NA	NA	NA	2236	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCCTCTGCTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	98472705	98472080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_98472100_98472700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004736	chr11	-	831	3	FSM	ENSMUSG00000038150.8	ENST00000584220.5	414	3	-2	-415	-2	415	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTCAGTGTGTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	98474943	98473122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_98473674_98473961_98474114_98474815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004737	chr11	-	388	3	NNC	ENSMUSG00000038150.8	novel	414	3	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGCCCCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98474911	98473537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_98473674_98473957_98474114_98474815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004738	chr11	-	385	3	NNC	ENSMUSG00000038150.8	novel	414	3	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTAGCCCCTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98474917	98473537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_98473674_98473966_98474114_98474815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004739	chr11	+	890	5	ISM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	11023	0	11023	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGCACGGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	98584402	98586805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004740	chr11	-	485	1	ISM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	6917	0	6917	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTCTGTGATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98659242	98658757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98658800_98659200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004741	chr11	-	520	2	ISM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	6077	176	6077	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATATTCCAAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	98660082	98658933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98659246_98659874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004742	chr11	+	853	1	NIC	ENSMUSG00000058756.14	novel	2452	10	NA	NA	26281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGCCTCCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	98658979	98659832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_98659000_98659800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004743	chr11	-	537	2	ISM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	4741	1825	4741	-1825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACCTTTCTCAGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	98661418	98660582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98660715_98661013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004744	chr11	-	496	2	ISM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	4067	2471	4067	-2471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCGGCTCAGCGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	98662092	98661228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98661658_98662025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004745	chr11	-	507	2	ISM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	216	4096	216	-4096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTCCCACATACTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	98665943	98662853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_98662961_98665543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004746	chr11	+	1371	7	ISM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	4168	-439	1346	343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGAAAGTTTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98690825	98696776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004747	chr11	+	1072	5	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	110	6969	110	-6969	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCTTGGAAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	98755044	98783545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98755079_98775799_98775931_98781525_98781659_98782321_98782439_98782888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004748	chr11	+	462	3	ISM	ENSMUSG00000038013.15	ENST00000394103.7	1169	5	16	3907	16	-3361	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGTTAGGGATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98775812	98787153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98775931_98781525_98781659_98786942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004749	chr11	+	418	3	ISM	ENSMUSG00000038013.15	ENST00000394103.7	1169	5	5760	1398	5760	-852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGAGGGAGGGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98781556	98789662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98781659_98786942_98787153_98789556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004750	chr11	+	1051	4	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	26657	3362	5795	-3362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGTTAGGGATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	98781591	98787152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98781659_98782321_98782439_98782888_98783546_98786942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004751	chr11	+	1289	4	ISM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	27970	-292	7108	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGTGAATGGACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	98782904	98790806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98783546_98786942_98787153_98789556_98789659_98790470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004752	chr11	+	397	1	ISM	ENSMUSG00000038013.15	ENSMUST00000037480.9	7011	8	36201	4805	14868	1	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTCCCCCATCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	98790664	98791061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98790700_98791100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004753	chr11	+	437	2	ISM	ENSMUSG00000037992.17	ENSMUST00000164748.8	3129	9	32	24291	32	-23510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCGGGCACCTCAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	98830568	98841477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98830599_98841070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004754	chr11	+	470	3	ISM	ENSMUSG00000037992.17	ENST00000394086.7	1978	8	64	5975	64	-5975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCGCAGGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	98850617	98859012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98850797_98857172_98857322_98858870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004755	chr11	+	438	3	ISM	ENSMUSG00000037992.17	ENST00000394086.7	1978	8	8356	3495	7672	-3495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGAGAGTCTGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	98858909	98861492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98859013_98860982_98861144_98861318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004756	chr11	+	466	3	ISM	ENSMUSG00000037992.17	ENST00000394086.7	1978	8	10472	2409	9788	-2409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCTCAGTGCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	98861025	98862578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98861144_98861318_98861496_98862407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004757	chr11	+	1706	4	ISM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	10080	359	10080	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGGGGTCCAAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	98861317	98865409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98861496_98862407_98862613_98863337_98863497_98864245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004758	chr11	+	1447	1	ISM	ENSMUSG00000037992.17	ENST00000425707.7	2938	7	35778	0	13081	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCCTCTTGCCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	98864318	98865765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98864300_98865800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004759	chr11	+	345	1	ISM	ENSMUSG00000017493.13	ENSMUST00000017637.13	3831	4	12804	0	6737	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGGCAGATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	98944873	98945218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_98944900_98945200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004760	chr11	-	2025	6	ISM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	11268	-1	10719	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTGTTTTTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	99110575	99099871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004761	chr11	-	969	7	ISM	ENSMUSG00000037935.17	ENST00000431889.6	1431	9	5333	3230	5333	-6	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCGCCTCCTCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	99115961	99103945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004762	chr11	-	724	2	ISM	ENSMUSG00000019761.11	ENSMUST00000103131.5	2094	8	3093	0	-174	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCAGAATTATTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	99277097	99276079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_99276463_99276756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004763	chr11	-	1130	5	ISM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	2024	58	-1240	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTAATTTCTCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	99278163	99276143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_99276463_99276736_99277096_99277356_99277575_99277823_99277950_99278055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004764	chr11	-	515	2	NNC	ENSMUSG00000044041.5	novel	1654	8	NA	NA	2690	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGTTTCTGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	100009702	100008152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_100008493_100009527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004765	chr11	-	580	2	ISM	ENSMUSG00000044041.5	ENSMUST00000007275.3	1654	8	31	2660	31	-2660	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCAGGCTCAAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	100012361	100010812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100010882_100011850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004766	chr11	-	1431	3	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	2597	1667	-602	-1667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGTCGGGATGTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100027356	100024492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100024618_100025000_100025158_100026207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004767	chr11	-	1219	2	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	4	3797	4	-3797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTGCTGGGGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	100029949	100026622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100027784_100029891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004768	chr11	-	439	3	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	3315	0	1421	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCCTCCCTGGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	100095059	100093987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100094236_100094781_100094847_100094933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004769	chr11	-	672	5	FSM	ENSMUSG00000045545.9	ENST00000398469.5	674	5	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTGGCCCTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	100096477	100094931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_100095155_100095249_100095376_100095458_100095621_100095773_100095871_100096413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004770	chr11	-	611	4	NNC	ENSMUSG00000045545.9	novel	674	5	NA	NA	602	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTGGCCCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	100095878	100094932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_100095155_100095249_100095372_100095458_100095621_100095773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004771	chr11	-	623	4	ISM	ENSMUSG00000045545.9	ENST00000398469.5	674	5	594	0	594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTGGCCCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	100095886	100094932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100095155_100095249_100095376_100095458_100095621_100095773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004772	chr11	-	609	4	ISM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	367	1533	367	-588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTACGAGAAGATGGCG	NA	NA	NA	NA	NA	NA	NA	NA	100098007	100095520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100095621_100095773_100095931_100096446_100096530_100097738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004773	chr11	-	321	2	ISM	ENSMUSG00000084257.2	ENSMUST00000121423.2	964	7	2007	820	2007	-820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGGAGCCACCAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100120897	100120490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100120658_100120743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004774	chr11	-	309	1	Genic_Genomic	ENSMUSG00000053797.11	novel	NA	NA	NA	NA	435	2	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATGTCTATGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	100137223	100136914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_100136900_100137200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004775	chr11	-	947	5	ISM	ENSMUSG00000053797.11	ENST00000301653.9	1589	7	1212	0	-880	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGATGTCTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100138538	100136916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100137204_100137435_100137657_100137927_100138054_100138139_100138302_100138387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004776	chr11	-	494	2	FSM	ENSMUSG00000053797.11	ENST00000584759.1	648	2	4	150	4	-150	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTAATGTTTTGCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	100137654	100137066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_100137342_100137435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004777	chr11	-	292	1	NIC	ENSMUSG00000053797.11	novel	1589	7	NA	NA	-75	2	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGTGAGTTGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100137733	100137441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_100137400_100137700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004778	chr11	-	709	5	ISM	ENSMUSG00000053797.11	ENSMUST00000007280.9	1565	8	961	561	944	-34	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGCCACCTACCGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	100138767	100137477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100137657_100137927_100138054_100138139_100138302_100138387_100138545_100138682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004779	chr11	-	1133	5	FSM	ENSMUSG00000053797.11	ENST00000580621.5	1526	5	-25	418	-8	-418	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGCGCCATGGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	100139736	100137861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_100138054_100138139_100138302_100138387_100138545_100138682_100138766_100139197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004780	chr11	-	777	5	ISM	ENSMUSG00000053654.8	ENST00000451704.1	879	6	1275	0	1275	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCTGTCTGCGTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	100156590	100153895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100153994_100154119_100154251_100155267_100155525_100155754_100155881_100156425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004781	chr11	+	319	2	ISM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	111	1277	111	-1277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAAGAAGGTGGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100210821	100211645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100210987_100211491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004782	chr11	+	423	3	ISM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	780	624	780	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTCCGCTTTTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	100211490	100212298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100211656_100211773_100211876_100212142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004783	chr11	+	200	1	Genic_Genomic	ENSMUSG00000035530.14	novel	NA	NA	NA	NA	2013	1	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTCCAGATTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	100212723	100212923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_100212700_100212900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004784	chr11	-	543	1	FSM	ENSMUSG00000091478.3	ENSMUST00000081241.2	411	1	-14	-118	-14	118	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTGTGCCTGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	100252966	100252423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_100252400_100253000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004785	chr11	-	320	1	Genic_Genomic	ENSMUSG00000001552.15	novel	NA	NA	NA	NA	26813	2	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCTGTTAAAAGCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	100261762	100261442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_100261400_100261800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004786	chr11	-	438	2	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	25289	558	25289	-558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCCAGCTGCCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	100263286	100262002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100262276_100263121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004787	chr11	-	509	3	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	20766	1807	20766	-1807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGACCCAGCTGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	100267809	100264928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100265026_100265151_100265303_100267548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004788	chr11	-	563	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	19358	4443	19358	-4443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTGTTTGTCCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	100269217	100267564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100267825_100268914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004789	chr11	-	380	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	18123	5857	18123	-5857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTATGGAATCCCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	100270452	100268978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100269254_100270347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004790	chr11	-	322	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	14555	9448	14555	-9448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTAAGTTCCTGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	100274020	100272569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100272704_100273832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004791	chr11	-	401	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	14110	10794	14110	-10794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACAACCTCTCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	100274465	100273915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100274072_100274220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004792	chr11	-	460	2	ISM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	11357	11119	11357	-11119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAACGATGAGGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	100277218	100274240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100274481_100276998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004793	chr11	-	291	2	ISM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	41	15552	41	-13875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACCCCAGGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100288534	100276996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100277215_100288461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004794	chr11	-	1195	5	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	2005	0	2005	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAGTCTGCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100303657	100299281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004795	chr11	-	1229	5	ISM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	29	3275	29	-3275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGCATTGGTCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	100305633	100302556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004796	chr11	+	650	3	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	-69	3047	0	-3047	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTTTGACAACAGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	100306522	100311891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100306852_100311225_100311372_100311716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004797	chr11	+	678	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	4697	2991	4628	-2279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGGGGTGTCCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	100311219	100312659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100311372_100311716_100311907_100312019_100312166_100312469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004798	chr11	+	588	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	5279	2734	5210	-2022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTTTGGTCCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	100311801	100312916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100311907_100312019_100312166_100312469_100312660_100312769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004799	chr11	+	644	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	5528	2006	5459	-1294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTTCTTGGGCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	100312050	100313644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100312166_100312469_100312660_100312769_100312916_100313451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004800	chr11	+	542	4	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	6058	1616	5989	-904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACGGGGAGAATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100312580	100314034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100312660_100312769_100312916_100313451_100313645_100313910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004801	chr11	+	659	4	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	6165	513	6165	-513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTCAGGAACTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100312756	100314425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100312916_100313451_100313645_100313910_100314054_100314261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004802	chr11	+	920	4	ISM	ENSMUSG00000001555.11	ENSMUST00000107400.3	1467	8	6936	-271	6936	271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGTCACTAGGCACGG	NA	NA	NA	NA	NA	NA	NA	NA	100313527	100315209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100313645_100313910_100314054_100314261_100314426_100314713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004803	chr11	+	508	1	ISM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	8620	0	8551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCCAGAAGTGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	100315142	100315650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100315100_100315600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004804	chr11	-	1306	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	49	-7	49	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGCGTCTTTAATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	100331705	100320177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004805	chr11	-	509	4	FSM	ENSMUSG00000017176.18	ENST00000521789.5	513	4	6	-2	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCCACAAAGCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	100327062	100320601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_100320776_100323743_100323907_100325520_100325611_100326980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004806	chr11	-	419	3	NNC	ENSMUSG00000017176.18	novel	513	4	NA	NA	1457	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGCCCACAAAGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	100325611	100320602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_100320776_100323751_100323907_100325520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004807	chr11	-	533	1	ISM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	51113	2	46711	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGATGCTCTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	100367713	100367180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100367200_100367700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004808	chr11	-	566	3	ISM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	45186	577	45186	-577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTCTAGGGCCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	100369238	100367760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100368165_100368840_100368918_100369153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004809	chr11	+	1766	3	ISM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	1340	418	1340	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAAGTTCCTATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100467069	100472136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100467732_100469738_100469879_100471172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004810	chr11	+	975	1	ISM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	5850	0	5850	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100471579	100472554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100471600_100472600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004811	chr11	+	1787	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	46	264	46	-264	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCATCAGAGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	100513747	100518169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004812	chr11	+	751	3	FSM	ENSMUSG00000017837.13	ENST00000316082.4	746	3	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGGGTGGCGAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	100515012	100517098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_100515126_100515768_100516061_100516752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004813	chr11	+	462	3	FSM	ENSMUSG00000017837.13	ENST00000449471.8	461	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGATGGGTGGCGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	100515014	100517096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_100515126_100515768_100515843_100516819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004814	chr11	+	752	3	NNC	ENSMUSG00000017837.13	novel	746	3	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGATGGGTGGCGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	100515015	100517096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_100515126_100515768_100516061_100516746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004815	chr11	+	741	3	NNC	ENSMUSG00000017837.13	novel	746	3	NA	NA	1	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGATGGGTGGCGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	100515016	100517096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_100515122_100515768_100516061_100516752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004816	chr11	+	387	3	ISM	ENSMUSG00000017837.13	ENST00000479407.5	532	4	752	36	752	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGCCCTTCTTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	100515767	100517060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100515843_100515939_100516011_100516819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004817	chr11	+	1618	1	Genic_Genomic	ENSMUSG00000017837.13	novel	NA	NA	NA	NA	1801	1	mono-exon	FALSE	NA	NA	NA	NA	NA	553	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCGTCCCCTACCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	100516816	100518434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_100516800_100518400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004818	chr11	-	427	1	Genic_Genomic	ENSMUSG00000109112.2	novel	NA	NA	NA	NA	2759	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTAGCTAACCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100531184	100530757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_100530800_100531200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004819	chr11	-	786	2	FSM	ENSMUSG00000109112.2	ENST00000587304.3	1745	2	121	838	111	-827	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCCCTGTTGCTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	100533832	100531596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_100531996_100533445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004820	chr11	-	1360	3	ISM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	20262	0	20262	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGATTGTTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	100608779	100605834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100606989_100607583_100607678_100608667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004821	chr11	-	1057	1	ISM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	22148	2	22148	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAAGATTGTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100606893	100605836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100605800_100606900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004822	chr11	-	378	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	2917	-2	2917	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCAGCCAGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100658265	100657628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100657851_100658109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004823	chr11	-	224	1	NIC	ENSMUSG00000017747.14	novel	2462	9	NA	NA	3330	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGCAGCCAGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100657852	100657628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_100657600_100657900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004824	chr11	-	310	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	2206	479	2206	-479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATGATGAGACCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	100658976	100658109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100658283_100658839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004825	chr11	-	489	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	1021	1592	1021	-1592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGACCAGGTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	100660161	100659222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100659404_100659853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004826	chr11	-	371	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	665	2390	665	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCCTAGAGCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	100660517	100660020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100660356_100660481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004827	chr11	-	354	2	ISM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	56	2850	56	-2850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGAGGTACCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	100661126	100660480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100660604_100660895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004828	chr11	+	414	3	ISM	ENSMUSG00000004043.15	ENST00000590726.7	2211	17	1276	16657	1245	-16657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGCCTGAAACAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	100752554	100756331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100752704_100753956_100754047_100756156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004829	chr11	+	614	4	ISM	ENSMUSG00000004043.15	ENST00000590726.7	2211	17	4878	7084	4847	-7084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACGGCTGCCTCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	100756156	100765904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100756332_100764828_100764960_100765164_100765317_100765748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004830	chr11	+	496	3	ISM	ENSMUSG00000004043.15	ENST00000590726.7	2211	17	13885	6493	13854	-6493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTCCCTTCCCACGGG	NA	NA	NA	NA	NA	NA	NA	NA	100765163	100766495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100765317_100765748_100765905_100766308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004831	chr11	+	489	4	ISM	ENSMUSG00000004043.15	ENST00000677893.1	2371	18	16541	1790	16482	-1790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATCAGGACCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	100767791	100771198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100767885_100770104_100770198_100770436_100770644_100771102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004832	chr11	+	534	4	ISM	ENSMUSG00000004043.15	ENST00000590726.7	2211	17	19157	1033	19126	-1033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCCAGACCGACCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	100770435	100771955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100770644_100771102_100771198_100771293_100771425_100771855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004833	chr11	+	441	4	ISM	ENSMUSG00000004043.15	ENST00000590726.7	2211	17	20014	0	19983	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGGTCATGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100771292	100772988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100771425_100771855_100772012_100772563_100772616_100772887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004834	chr11	+	418	1	ISM	ENSMUSG00000004043.15	ENSMUST00000004145.14	3888	20	25401	0	24268	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTGCTTCCTGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100775577	100775995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100775600_100776000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004835	chr11	-	827	1	ISM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	51768	1712	51744	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	100778462	100777635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_100777600_100778500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004836	chr11	-	1160	1	Genic_Genomic	ENSMUSG00000004044.10	novel	NA	NA	NA	NA	12997	2	mono-exon	FALSE	NA	NA	NA	NA	NA	886	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAGGTTATATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	100848716	100847556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_100847600_100848700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004837	chr11	-	2037	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	-1	1455	-1	-1455	multi-exon	FALSE	canonical	NA	NA	NA	NA	3698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCCAAATTTCTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	100861714	100849013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_100850152_100860815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004838	chr11	-	1348	2	NNC	ENSMUSG00000004044.10	novel	3491	2	NA	NA	463	-1673	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGGGAGGTGGTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100861250	100849231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_100850145_100860815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004839	chr11	+	206	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	4	43849	4	-43781	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCAATGTGGTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	100902637	100909469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100902764_100909389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004840	chr11	+	177	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	6756	41922	6743	-41854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACAATTCTCAGATAAC	NA	NA	NA	NA	NA	NA	NA	NA	100909389	100911396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100909469_100911298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004841	chr11	+	293	3	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	8665	35114	8652	-35046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATCCTGTGACTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	100911298	100918204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100911397_100917506_100917590_100918092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004842	chr11	+	307	3	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	15458	31987	15445	-31919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGGACCATGGGAATCG	NA	NA	NA	NA	NA	NA	NA	NA	100918091	100921331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100918220_100920001_100920085_100921235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004843	chr11	+	206	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	18600	28482	18587	-28414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTGTGCAATATAGACG	NA	NA	NA	NA	NA	NA	NA	NA	100921233	100924836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100921330_100924726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004844	chr11	+	354	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	22103	25620	22090	-25552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACATTTGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100924736	100927698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100924940_100927547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004845	chr11	+	266	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	24947	24186	24934	-24118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTGACCCCTGCACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	100927580	100929132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100927699_100928984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004846	chr11	+	301	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	26349	23644	26336	-23576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTGCAGAAGCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	100928982	100929674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100929125_100929515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004847	chr11	+	244	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	26882	22586	26869	-22518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGGTAAGTGTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	100929515	100930732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100929674_100930646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004848	chr11	+	208	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	28015	19424	28002	-19356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCCCTCTGTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100930648	100933894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100930738_100933775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004849	chr11	+	263	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	31142	18558	31129	-18490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGATCCACTTCATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	100933775	100934760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100933895_100934616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004850	chr11	+	387	3	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	32029	13967	32016	-13899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGAGCCGGGGGCGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	100934662	100939351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100934834_100935341_100935450_100939243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004851	chr11	+	227	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	36609	7349	36596	-7281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGCTCTCTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	100939242	100945969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100939352_100945851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004852	chr11	+	293	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	43216	6886	43203	-6818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGCAGGGGGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	100945849	100946432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100945970_100946259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004853	chr11	+	300	2	ISM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	43657	22	43644	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCCTGCTGGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	100946290	100953296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100946432_100953137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004854	chr11	+	170	1	ISM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	52871	1227	50502	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGATGCCTGGGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	100953148	100953318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100953100_100953300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004855	chr11	+	1923	4	ISM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	1883	0	1883	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGACGTTGCTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100962720	100968498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100962869_100963042_100963129_100964672_100964930_100967066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004856	chr11	+	1660	2	ISM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	3824	40	3824	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATAAAGTGCTGAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	100964661	100968458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100964930_100967066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004857	chr11	+	830	2	ISM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	5	2912	5	-2912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAAGGGACCCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	100973395	100974533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100973517_100973824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004858	chr11	+	1035	3	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	376	1751	376	-1751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCAGCCTCCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	100973826	100975694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100974533_100975141_100975357_100975580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004859	chr11	+	704	4	ISM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	2909	0	2909	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	100976359	100977445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100976447_100976615_100976714_100976823_100976971_100977073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004860	chr11	+	1317	3	ISM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	1919	84	1919	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAGGTTTGATCATCC	NA	NA	NA	NA	NA	NA	NA	NA	100980044	100982949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_100980145_100980493_100980696_100981934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004861	chr11	+	1101	1	NIC	ENSMUSG00000017801.16	novel	1826	8	NA	NA	3807	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100981932	100983033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_100981900_100983000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004862	chr11	-	1642	3	FSM	ENSMUSG00000044052.4	ENST00000332438.4	1642	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAAGTTGGTGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	101066269	101051337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_101051356_101063924_101065505_101066225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004863	chr11	-	958	1	ISM	ENSMUSG00000044052.4	ENST00000332438.4	1642	3	1006	12968	1006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGCAAATGAGATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	101065263	101064305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101064300_101065300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004864	chr11	-	1340	2	FSM	ENSMUSG00000044052.4	ENST00000591765.1	1926	2	280	306	280	-306	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTGCTTTATGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101067037	101064611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_101065505_101066590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004865	chr11	-	177	1	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	24363	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAACTAGGCCTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	101083829	101083652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_101083700_101083800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004866	chr11	-	213	2	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	24061	47	24061	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGCTCCTGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	101084131	101083699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101083826_101084044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004867	chr11	-	240	2	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	21694	2069	21694	-2069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTGAGGTGAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	101086498	101085721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101085808_101086344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004868	chr11	-	219	2	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	18022	2739	18022	1823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGTGTCTTGCAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	101090170	101086391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101086524_101090083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004869	chr11	-	1845	1	ISM	ENSMUSG00000006920.15	ENSMUST00000100417.3	3636	15	27193	0	18133	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGCTGCAGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	101090059	101088214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101088200_101090100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004870	chr11	-	367	2	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	13424	10440	13424	-5878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAGCAGGTACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101094768	101094092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101094278_101094586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004871	chr11	-	232	2	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	9963	10949	9963	-6387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTTCTTCAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	101098229	101094601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101094768_101098163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004872	chr11	-	228	2	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	9080	14540	9080	-9978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTGGCACAGACTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	101099112	101098192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101098256_101098947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004873	chr11	-	358	3	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	6665	15359	6665	-10797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCACTCTTTCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	101101527	101099011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101099112_101100205_101100309_101101372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004874	chr11	-	294	2	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	3520	17726	3520	-13164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAAGGTGCACAGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	101104672	101101378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101101550_101104549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004875	chr11	-	229	2	ISM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	241	20920	241	-16358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGTCCACGGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	101107951	101104572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101104671_101107820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004876	chr11	+	1166	4	FSM	ENSMUSG00000001240.14	ENSMUST00000129680.8	1178	4	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTTCCTAGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	101136865	101139076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101137399_101137880_101137971_101138411_101138515_101138636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004877	chr11	+	1106	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTGTTACTACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101144532	101150375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004878	chr11	-	303	1	Genic_Genomic	ENSMUSG00000017188.4	novel	NA	NA	NA	NA	674	1	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTAGTGTGTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	101169095	101168792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_101168800_101169100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004879	chr11	-	521	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	145	220	-26	150	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTTCACGTGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101169795	101169013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_101169279_101169539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004880	chr11	-	873	1	Genic_Genomic	ENSMUSG00000035086.14	novel	NA	NA	NA	NA	15426	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTCCAATTTTCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	101177649	101176776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_101176800_101177600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004881	chr11	-	949	3	ISM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	11785	2287	11748	179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTAAAATTGAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	101181327	101179064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101179808_101180608_101180752_101181264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004882	chr11	-	555	3	ISM	ENSMUSG00000035086.14	ENSMUST00000170502.2	725	4	445	0	445	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTTCCTTTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	101192630	101186732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101187143_101189834_101189903_101192553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004883	chr11	+	2085	5	ISM	ENSMUSG00000078652.10	ENST00000293362.7	2667	11	3894	0	3894	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGGGTCACACATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	101211008	101214395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004884	chr11	+	1748	1	ISM	ENSMUSG00000078652.10	ENST00000293362.7	2667	11	5503	30	5503	2	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGCTGTACTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	101212617	101214365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101212600_101214400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004885	chr11	+	1055	4	FSM	ENSMUSG00000078650.3	ENST00000585489.1	1054	4	3	-4	3	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAGGAACAACTAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	101258569	101267669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101258853_101261531_101261642_101263527_101263634_101267113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004886	chr11	+	887	4	FSM	ENSMUSG00000078650.3	ENST00000592383.5	985	4	100	-2	73	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGCAACAGTTCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	101258639	101267537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101258853_101261531_101261666_101265415_101265532_101267113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004887	chr11	+	948	4	NNC	ENSMUSG00000078650.3	novel	1054	4	NA	NA	106	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTAGGAACAACTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	101258672	101267668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_101258850_101261531_101261642_101263527_101263634_101267113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004888	chr11	-	188	1	NIC	ENSMUSG00000097239.8	novel	1898	17	NA	NA	17493	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	101297852	101297664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_101297700_101297900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004889	chr11	-	620	4	ISM	ENSMUSG00000097487.8	ENSMUST00000107252.9	853	7	788	1	788	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCCTTCCCTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	101314707	101309638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101310013_101310500_101310555_101312690_101312781_101314605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004890	chr11	-	248	3	NNC	ENSMUSG00000097487.8	novel	361	4	NA	NA	625	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGTACAGCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	101314870	101312690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_101312781_101314605_101314696_101314802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004891	chr11	-	360	4	FSM	ENSMUSG00000097487.8	ENST00000409446.8	361	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGTACAGCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	101315545	101312690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_101312781_101314605_101314705_101314802_101314870_101315441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004892	chr11	-	728	2	ISM	ENSMUSG00000097487.8	ENSMUST00000093933.11	748	6	-609	3333	55	-2339	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACCGACGTCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	101316104	101315029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101315095_101315441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004893	chr11	+	1560	3	ISM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	6265	976	6265	-976	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCAGGACCAGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	101322175	101325523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101322373_101322907_101323025_101324277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004894	chr11	+	1281	1	Genic_Genomic	ENSMUSG00000035007.6	novel	NA	NA	NA	NA	9309	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTGCACTCTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	101325219	101326500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_101325200_101326500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004895	chr11	+	623	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	-4	-5	-4	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCCTATTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	101333119	101336360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004896	chr11	+	608	5	NNC	ENSMUSG00000063316.14	novel	614	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	101333123	101336355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_101333283_101333548_101333626_101334326_101334497_101336045_101336157_101336264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004897	chr11	+	740	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	-1	-7	-1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCCTATTGCATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	101333270	101336362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004898	chr11	+	544	4	ISM	ENSMUSG00000010358.14	ENST00000438323.2	1064	7	18	878	18	-878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAGGTGACAGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	101339251	101348341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004899	chr11	+	438	4	ISM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	8894	701	8893	-396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGAAGGTGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	101348126	101348823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101348164_101348241_101348349_101348445_101348633_101348716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004900	chr11	+	709	4	ISM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	9089	110	9088	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGATTTCTCTGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	101348321	101349414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101348349_101348445_101348633_101348716_101348824_101349026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004901	chr11	+	454	1	Genic_Genomic	ENSMUSG00000010358.14	novel	NA	NA	NA	NA	9840	3	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTCTCCAGCAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	101349073	101349527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_101349100_101349500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004902	chr11	-	1007	1	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	6479	0	6479	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGACCAGATGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	101350577	101349570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101349600_101350600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004903	chr11	-	1183	2	ISM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	5616	587	5616	-587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTATGTGCCAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	101351440	101350157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101351103_101351202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004904	chr11	+	916	4	ISM	ENSMUSG00000001313.13	ENST00000587250.4	1343	7	2507	0	2507	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTGTGCTGTGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	101361541	101365278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101361679_101361883_101362129_101363246_101363321_101364818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004905	chr11	+	766	1	ISM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	2913	0	2879	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101361913	101362679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101361900_101362700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004906	chr11	+	97	2	ISM	ENSMUSG00000017119.21	ENST00000589872.1	2703	17	9558	11785	9558	-11785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGTCCTCCAGAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	101456568	101457079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101456608_101457021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004907	chr11	+	120	2	ISM	ENSMUSG00000017119.21	ENST00000589872.1	2703	17	10191	10859	10191	-10859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTTGTGATATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	101457201	101458005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101457237_101457920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004908	chr11	+	105	2	ISM	ENSMUSG00000017119.21	ENST00000589872.1	2703	17	12378	8724	12378	-8724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGCCTGATGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	101459388	101460140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101459435_101460081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004909	chr11	+	107	2	ISM	ENSMUSG00000017119.21	ENST00000589872.1	2703	17	15738	5525	15738	-5525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCTTGGGGCAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	101462748	101463339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101462804_101463287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004910	chr11	+	145	2	ISM	ENSMUSG00000017119.21	ENST00000589872.1	2703	17	16322	5152	16322	-5152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTATGTGAGACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	101463332	101463712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101463399_101463633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004911	chr11	+	125	2	ISM	ENSMUSG00000017119.21	ENST00000589872.1	2703	17	16701	3002	16701	-3002	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGGAGGAGATTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	101463711	101465862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101463799_101465824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004912	chr11	+	133	2	ISM	ENSMUSG00000017119.21	ENST00000589872.1	2703	17	20143	794	20143	-794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGGTAACGACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	101467153	101468070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101467236_101468019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004913	chr11	+	1487	2	ISM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	7693	23	7693	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAAATTGTTCTTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	101480760	101482591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101480815_101481158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004914	chr11	+	1461	1	NIC	ENSMUSG00000034947.14	novel	2304	9	NA	NA	8086	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGGGGCATTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	101481153	101482614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_101481200_101482600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004915	chr11	+	191	1	FSM	ENSMUSG00000119776.1	ENSMUST00000240535.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAGTAAAGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101518191	101518382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101518200_101518400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004916	chr11	+	391	3	FSM	ENSMUSG00000010362.10	ENST00000617591.4	387	3	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTGTGTGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101519087	101526650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101519279_101521063_101521187_101526573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004917	chr11	+	382	3	NIC	ENSMUSG00000010362.10	novel	731	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTGTGTGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101519091	101526650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_101519279_101521063_101521187_101526578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004918	chr11	+	381	3	NNC	ENSMUSG00000010362.10	novel	387	3	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAGCTGTGTGATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	101519101	101526650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_101519283_101521063_101521187_101526573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004919	chr11	+	823	5	ISM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	2294	0	1970	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGGTTTGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	101521061	101526926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004920	chr11	+	191	1	FSM	ENSMUSG00000118718.1	ENSMUST00000240145.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGGAATAAGAATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	101532573	101532764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101532600_101532800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004921	chr11	-	185	1	FSM	ENSMUSG00000119892.1	ENSMUST00000240379.1	191	1	6	0	6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGGAATAAGAATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	101536750	101536565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_101536600_101536800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004922	chr11	+	1380	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	101556368	101558658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_101556464_101557373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004923	chr11	+	1287	1	NIC	ENSMUSG00000034936.3	novel	1382	2	NA	NA	1005	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	101557371	101558658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_101557400_101558700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004924	chr11	-	690	1	ISM	ENSMUSG00000017724.15	ENSMUST00000164750.8	2336	13	14874	5	14233	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTATTTGCTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	101661262	101660572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101660600_101661300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004925	chr11	-	748	4	ISM	ENSMUSG00000017724.15	ENST00000545089.5	1571	11	12915	0	12915	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGCCAAATCTAAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	101662580	101661009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004926	chr11	-	3725	1	Genic_Genomic	ENSMUSG00000003518.14	novel	NA	NA	NA	NA	8638	2	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGTTTTGTGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	101865691	101861966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_101862000_101865700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004927	chr11	-	4109	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	3	100	3	-100	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCCATCCGGGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	101875622	101862068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_101865766_101872442_101872670_101875437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004928	chr11	-	1049	1	ISM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	2810	0	2810	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	102044420	102043371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102043400_102044400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004929	chr11	-	1173	2	ISM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	1691	33	1691	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTCCTCCGAAAATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	102045539	102043404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102044421_102045382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004930	chr11	-	1130	3	ISM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	499	248	499	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGACGTCACATGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	102046731	102043619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102044421_102045382_102045530_102046549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004931	chr11	-	953	1	Genic_Genomic	ENSMUSG00000020922.12	novel	NA	NA	NA	NA	21781	1	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTCAGGTTTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	102054274	102053321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_102053300_102054300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004932	chr11	-	1482	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	14	760	14	-760	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTGTCTCCCATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102076108	102054082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004933	chr11	+	903	3	ISM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	3077	0	3077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	102083571	102084907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_102083694_102083910_102084053_102084268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004934	chr11	+	1295	3	ISM	ENSMUSG00000034773.17	ENST00000319977.8	1529	7	1	5707	1	-5707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGTCCTGAGAAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	102145778	102150287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_102146848_102148712_102148797_102150145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004935	chr11	+	1914	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	102175781	102180063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004936	chr11	+	2248	3	FSM	ENSMUSG00000034757.16	ENST00000319511.6	2282	3	34	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCTAAGCCCTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	102176047	102180006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_102176545_102178051_102178698_102178901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004937	chr11	+	1461	2	FSM	ENSMUSG00000034757.16	ENST00000587172.1	1454	2	-5	-2	-5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTAAGCCCTTAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	102178054	102180008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_102178409_102178901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004938	chr11	-	1462	2	Antisense	novelGene_ENSMUSG00000034757.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGGCTGGGGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102180006	102178059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_102178424_102178908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004939	chr11	+	384	1	NIC	ENSMUSG00000034757.16	novel	1939	4	NA	NA	194	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGAGGCCAGTTGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	102178324	102178708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_102178300_102178700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004940	chr11	-	495	2	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	8074	-257	8074	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCAGACTGAGCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	102197793	102197209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102197593_102197681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004941	chr11	-	173	2	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	6962	609	6962	-609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGTAAGCAGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	102198905	102198075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102198118_102198774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004942	chr11	-	169	2	ISM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	5272	2859	5272	-2859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGCGAAGGCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	102200595	102200325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102200379_102200479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004943	chr11	+	200	1	ISM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	8953	0	8953	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCATCTGTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	102293181	102293381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_102293200_102293400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004944	chr11	-	153	2	ISM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	2947	44	2947	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCAGAGGCTCAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	102294536	102294286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102294362_102294458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004945	chr11	-	150	2	ISM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	2793	221	2793	-221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGTCTGTCTCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	102294690	102294463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102294540_102294616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004946	chr11	-	140	2	ISM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	2569	374	2569	-374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGGGCTGGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102294914	102294616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102294699_102294856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004947	chr11	-	131	2	ISM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	2142	657	2142	-657	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGTGGGCATCAGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	102295341	102294899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102294967_102295277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004948	chr11	-	119	2	ISM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	1808	1145	1808	-1145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATACCGTGAGCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	102295675	102295387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102295452_102295620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004949	chr11	-	141	2	ISM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	1577	1431	1577	-1431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGACCTCTGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102295906	102295673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102295746_102295837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004950	chr11	-	106	2	ISM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	913	1609	913	-1609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGCCACCCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	102296570	102295851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102295906_102296518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004951	chr11	-	105	2	ISM	ENSMUSG00000018677.10	ENSMUST00000107098.8	1606	12	1068	3221	236	-2789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCCCAAGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	102297247	102297031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102297077_102297187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004952	chr11	-	163	2	ISM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	0	2945	0	-2945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACCAGATCAAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	102297483	102297187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102297248_102297380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004953	chr11	-	158	2	ISM	ENSMUSG00000018677.10	ENSMUST00000107098.8	1606	12	10	3602	10	-3170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCGGGGCTGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	102298305	102297412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102297481_102298215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004954	chr11	+	560	4	ISM	ENSMUSG00000034708.13	ENST00000639447.1	796	6	459	-5	459	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGACCCTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	102325222	102327074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_102325336_102325528_102325653_102325884_102325983_102326849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004955	chr11	+	1275	5	ISM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	4740	-2	1124	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATCTGATTTGTTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	102325887	102327635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004956	chr11	-	1651	1	ISM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	78634	0	78634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGAGTCTGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	102368391	102366740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102366700_102368400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004957	chr11	+	1061	1	FSM	ENSMUSG00000050288.7	ENSMUST00000057893.7	3663	1	2602	0	2602	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTAGCTCTTTAATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102497823	102498884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_102497800_102498900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004958	chr11	-	274	1	ISM	ENSMUSG00000086283.8	ENSMUST00000154798.8	1045	4	4347	0	4347	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGCATTGATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	102510895	102510621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102510600_102510900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004959	chr11	-	266	2	ISM	ENSMUSG00000086283.8	ENSMUST00000154798.8	1045	4	2844	494	2844	-494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCCCTCAAACTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	102512398	102511115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102511287_102512303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004960	chr11	-	1641	1	Genic_Genomic	ENSMUSG00000020925.17	novel	NA	NA	NA	NA	11409	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCTGTCTTGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	102577151	102575510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_102575500_102577200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004961	chr11	-	1272	2	ISM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	8873	598	8873	-598	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACACACCTGCAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	102579687	102576111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102577323_102579626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004962	chr11	-	581	1	Genic_Genomic	ENSMUSG00000034520.15	novel	NA	NA	NA	NA	4743	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTTAAAGGGTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	102690984	102690403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_102690400_102691000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004963	chr11	-	620	2	ISM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	1982	1076	1982	-1076	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCTATGTGTTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102693745	102691480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_102692022_102693666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004964	chr11	-	1747	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTCCACTTGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	102907995	102884870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004965	chr11	-	876	5	FSM	ENSMUSG00000020935.9	ENST00000342350.9	875	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTAGGTACCATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102919016	102885657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891173_102918970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004966	chr11	+	2178	1	FSM	ENSMUSG00000048878.7	ENSMUST00000053063.7	3495	1	1317	0	1317	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTCCTCGTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103008373	103010551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_103008400_103010600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004967	chr11	+	662	2	ISM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	719	452	688	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCAGCAAGCAGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	103024858	103029565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_103024968_103029012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004968	chr11	-	925	4	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	24259	-5	24259	5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCGCCCGACCAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	103261882	103257311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004969	chr11	-	1017	4	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	18110	1617	18110	-1617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCACCCCCTGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	103268031	103258933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103258998_103261687_103261882_103264765_103264912_103267418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004970	chr11	-	1208	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	342	10420	342	-10420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGAGACCATCCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	103285799	103267736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103268340_103270859_103271179_103285513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004971	chr11	-	698	3	ISM	ENSMUSG00000034247.10	ENST00000582986.5	2730	9	47	13542	47	-13542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGACTGTAGAGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	103286094	103270858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103271179_103285513_103285800_103286002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004972	chr11	-	157	2	FSM	ENSMUSG00000034239.15	ENST00000582111.2	148	2	-5	-4	-5	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACAAATATAACTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	103499784	103495333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_103495410_103499703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004973	chr11	-	146	2	ISM	ENSMUSG00000034239.15	ENSMUST00000167262.2	4576	14	5785	69934	-1	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTTACAAATATAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	103499780	103495336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103495410_103499707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004974	chr11	-	1372	1	ISM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	19678	0	11089	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	103569046	103567674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103567700_103569000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004975	chr11	-	1601	3	ISM	ENSMUSG00000020946.14	ENST00000640138.1	1246	4	2591	-406	2591	406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACTGGTCAGTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	103577544	103568900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103570224_103574617_103574759_103577407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004976	chr11	-	701	1	ISM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	18722	1627	10133	5	mono-exon	FALSE	NA	NA	NA	NA	NA	593	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGGGCGACTTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	103570002	103569301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103569300_103570000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004977	chr11	-	1504	6	FSM	ENSMUSG00000020946.14	ENST00000623037.2	1510	6	11	-5	3	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGGGCGACTTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	103588533	103569301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_103570224_103574561_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004978	chr11	-	1420	5	NIC	ENSMUSG00000020946.14	novel	1510	6	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCAATGGGCGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	103580147	103569306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_103570224_103574561_103574759_103577407_103577541_103578350_103578457_103580080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004979	chr11	-	652	2	NNC	ENSMUSG00000020946.14	novel	1246	4	NA	NA	5405	-124	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTCTTTCCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	103574730	103569675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_103570215_103574617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004980	chr11	-	774	3	ISM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	10054	147	1669	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCACAAGTGAGAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	103578466	103569698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103570224_103577407_103577541_103578350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004981	chr11	-	566	4	ISM	ENSMUSG00000020946.14	ENST00000638634.1	1315	5	8404	655	-10	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACCTCTCCCCTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	103580145	103569961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103570224_103577407_103577541_103578350_103578457_103580080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004982	chr11	-	913	1	ISM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	131362	0	131362	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	103713520	103712607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_103712600_103713500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004983	chr11	+	2204	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	38	0	38	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCATGTTCTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	103857602	103876163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004984	chr11	+	517	5	ISM	ENSMUSG00000018634.11	ENST00000352855.9	1142	12	20505	4250	44	-4250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCCGGCCCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	104044388	104061104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_104044435_104054629_104054716_104059881_104059989_104060658_104060780_104060947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004985	chr11	+	420	4	ISM	ENSMUSG00000018634.11	ENST00000577353.5	1175	11	15542	4006	15542	-4006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTACGACAATGAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	104059886	104061348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_104059989_104060658_104060780_104060947_104061102_104061305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004986	chr11	+	440	5	ISM	ENSMUSG00000018634.11	ENST00000577353.5	1175	11	16362	1144	16362	-1144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGGTACCTGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	104060706	104064210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_104060780_104060947_104061102_104061305_104061367_104063736_104063810_104064131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004987	chr11	+	411	4	ISM	ENSMUSG00000018634.11	ENST00000352855.9	1142	12	40243	-1	19782	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGCCACAGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	104064126	104065355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_104064218_104064420_104064557_104064714_104064757_104065213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004988	chr11	+	396	4	NNC	ENSMUSG00000018634.11	novel	1142	12	NA	NA	19791	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGCCACAGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	104064135	104065355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_104064212_104064420_104064557_104064714_104064757_104065213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004989	chr11	+	751	4	ISM	ENSMUSG00000018411.18	ENST00000535772.6	1314	10	78792	-17	23145	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGATCTGGCCCCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	104201091	104219084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_104201361_104212176_104212259_104213253_104213367_104218797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004990	chr11	-	2236	2	ISM	ENSMUSG00000020687.14	ENST00000066544.8	5492	20	45572	-2	45453	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAATGGTAATTTTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	104395765	104393349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_104394025_104394204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004991	chr11	-	1804	3	ISM	ENSMUSG00000020687.14	ENSMUST00000106962.9	3160	19	41969	-826	41969	826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTCATCCAGATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	104399249	104394936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_104396507_104397963_104398121_104399172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004992	chr11	+	341	2	NNC	ENSMUSG00000061086.13	novel	900	7	NA	NA	50	-3169	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGACGTGCTGCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	104468156	104474872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_104468401_104474775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004993	chr11	+	355	3	ISM	ENSMUSG00000061086.13	ENSMUST00000106956.10	900	7	3119	2602	3119	-2602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTCCGCTGGGCGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	104471225	104475439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_104471256_104474803_104474954_104475264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004994	chr11	+	337	4	ISM	ENSMUSG00000061086.13	ENSMUST00000106956.10	900	7	7249	0	7249	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCGTTGATTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104475355	104478041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_104475439_104475762_104475841_104476552_104476598_104477910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004995	chr11	-	376	1	FSM	ENSMUSG00000099681.2	ENSMUST00000190120.2	3708	1	3332	0	3332	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGTATTCAAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	105068927	105068551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_105068600_105068900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004996	chr11	+	916	2	ISM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	5523	386	5523	-386	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGCCTCCTTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	105239442	105241263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_105239620_105240524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004997	chr11	+	1445	1	NIC	ENSMUSG00000020695.15	novel	5795	30	NA	NA	6601	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCAGCGTTTGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	105240520	105241965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_105240500_105242000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004998	chr11	-	672	4	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	68911	0	68911	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTGTTTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	105273096	105251623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_105252026_105255341_105255385_105262687_105262802_105272983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000004999	chr11	-	1073	4	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	60880	11103	60880	-11103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGGCACTCAACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	105281127	105262726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_105262802_105272983_105273094_105276242_105276413_105280409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005000	chr11	-	1011	3	ISM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	42363	29450	42363	-29450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGTCAGTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	105299644	105281073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_105281758_105287774_105287922_105299464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005001	chr11	-	830	2	ISM	ENSMUSG00000019590.17	ENSMUST00000184086.8	1130	6	8297	-255	8297	255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGCCTTTCTGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	105826668	105825654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_105826394_105826577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005002	chr11	+	3469	3	FSM	ENSMUSG00000049354.9	ENST00000415273.2	1217	3	0	-2252	0	-1614	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACCTGTGCCTCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	105927764	105948536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_105928088_105944556_105944675_105945508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005003	chr11	+	3078	1	ISM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	19375	0	19308	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGATGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	105947072	105950150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_105947100_105950200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005004	chr11	+	554	3	ISM	ENSMUSG00000020700.12	ENST00000584573.5	2477	17	1	55426	1	-55351	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTATGTGTTTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	105975421	105989765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_105975760_105987816_105987939_105989671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005005	chr11	+	436	4	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	29309	11766	29309	-11766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGAATTCATCCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	106005008	106033350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106005110_106008315_106008430_106014611_106014733_106033250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005006	chr11	+	433	4	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	32614	8543	32614	-8543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCAGACAGGTATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	106008313	106036573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106008430_106014611_106014733_106033250_106033385_106036511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005007	chr11	+	572	4	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	63935	3149	63935	-3149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCCCTTGGATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	106039634	106041967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106039733_106040307_106040500_106041095_106041245_106041834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005008	chr11	+	512	4	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	64700	2542	64700	-2542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCAGAGAAAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106040399	106042574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106040500_106041095_106041245_106041834_106041967_106042443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005009	chr11	+	557	4	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	65429	1895	65429	-1895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTGGCTATGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	106041128	106043221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106041245_106041834_106041967_106042443_106042574_106043042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005010	chr11	+	778	4	ISM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	66198	-76	66198	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTGGCATCAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	106041897	106045192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106041967_106042443_106042574_106043042_106043221_106044791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005011	chr11	+	475	2	NNC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	67444	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTGGCATCAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	106043143	106045192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_106043218_106044791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005012	chr11	+	408	1	NIC	ENSMUSG00000020700.12	novel	3450	16	NA	NA	69089	5	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCATCAAGACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	106044788	106045196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_106044800_106045200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005013	chr11	-	1188	1	Genic_Genomic	ENSMUSG00000040699.14	novel	NA	NA	NA	NA	2486	2	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCATGTCCACAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106048267	106047079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_106047100_106048300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005014	chr11	-	1327	3	ISM	ENSMUSG00000040699.14	ENSMUST00000064545.11	798	5	721	-739	721	739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAATTCACTACACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	106050032	106048517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106049660_106049760_106049901_106049987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005015	chr11	-	1443	5	ISM	ENSMUSG00000069631.15	ENSMUST00000007444.14	2099	13	25051	-35	4891	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCCTTGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	106059311	106054141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005016	chr11	-	682	1	ISM	ENSMUSG00000069631.15	ENST00000638708.1	2097	11	29576	13	9366	2	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGAATGGCACCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106054836	106054154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106054200_106054800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005017	chr11	-	818	3	ISM	ENSMUSG00000069631.15	ENST00000640679.1	1767	11	25089	220	4942	176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGCCGCAGGCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	106059260	106054430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106055018_106058637_106058743_106059134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005018	chr11	-	385	3	ISM	ENSMUSG00000069631.15	ENST00000638888.1	1509	12	22254	187	8448	62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGGCCACAGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	106055754	106054793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106055018_106055256_106055300_106055636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005019	chr11	-	503	4	ISM	ENSMUSG00000069631.15	ENST00000640397.1	864	9	15885	0	2109	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCCTCCAGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	106062093	106054855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106055018_106058637_106058743_106061779_106061904_106061981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005020	chr11	-	617	4	ISM	ENSMUSG00000069631.15	ENST00000638888.1	1509	12	16104	966	2298	-68	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTTCAGCGCAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	106061904	106055572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106055788_106058637_106058743_106059134_106059307_106061779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005021	chr11	-	563	5	ISM	ENSMUSG00000069631.15	ENST00000640397.1	864	9	13371	3782	-405	-1	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTGCCGTCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	106064607	106058637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106058743_106061779_106061904_106061981_106062091_106064078_106064201_106064504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005022	chr11	-	561	5	ISM	ENSMUSG00000069631.15	ENST00000638888.1	1509	12	13851	4059	45	-29	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTCAAAGATATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	106064157	106058665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005023	chr11	-	562	5	ISM	ENSMUSG00000069631.15	ENST00000638888.1	1509	12	13417	4580	-389	-550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATATAGTATCAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	106064591	106059186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005024	chr11	-	398	4	NNC	ENSMUSG00000069631.15	novel	864	9	NA	NA	2532	-3344	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACGAAGGCTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	106075446	106061980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_106062091_106064078_106064201_106064504_106064608_106075383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005025	chr11	-	306	4	ISM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	50	9427	11	-5464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGGTGACATTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	106084338	106064100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106064201_106064504_106064608_106077950_106078007_106084291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005026	chr11	-	1736	1	Genic_Genomic	ENSMUSG00000078622.9	novel	NA	NA	NA	NA	5288	3	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGGTTAGGCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	106089966	106088230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_106088200_106090000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005027	chr11	-	1965	3	ISM	ENSMUSG00000078622.9	ENSMUST00000106865.8	704	6	1934	-1448	1934	1448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTGTCCTACAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	106093320	106090156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106091843_106092836_106093005_106093209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005028	chr11	+	386	2	ISM	ENSMUSG00000020705.7	ENST00000583590.5	3798	18	7122	24082	7107	-23231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTGGCTCTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	106114910	106115761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106115145_106115609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005029	chr11	+	316	3	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	14154	13254	14154	-13254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTATGCACCAGATTAGG	NA	NA	NA	NA	NA	NA	NA	NA	106121957	106125738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106122108_106123631_106123737_106125677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005030	chr11	+	360	3	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	15870	12383	15870	-12383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGCTTTGTATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	106123673	106126609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106123737_106125677_106125798_106126432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005031	chr11	+	356	3	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	17938	11049	17938	-11049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGTAAGTATATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	106125741	106127943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106125798_106126432_106126610_106127820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005032	chr11	+	247	3	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	21530	8066	21530	-8066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAATCCTGCTTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	106129333	106130926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106129434_106129961_106130010_106130827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005033	chr11	+	366	2	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	23022	6350	23022	-6350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTTGCAGGTAAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	106130825	106132642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106130926_106132376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005034	chr11	+	506	2	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	24570	5066	24570	-5066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGGGTTAGGCAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	106132373	106133926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106132654_106133700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005035	chr11	+	443	3	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	25894	1289	25894	-1289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAAACAAATATTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	106133697	106137703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106133928_106136152_106136264_106137601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005036	chr11	+	801	3	ISM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	28343	93	28343	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGACAAAGTGGACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	106136146	106138899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106136264_106137601_106137704_106138317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005037	chr11	+	614	1	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	30628	972	30576	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTATGTGAAAATCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	106138379	106138993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106138400_106139000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005038	chr11	+	347	1	ISM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	31745	122	31693	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGGGCTGTCGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	106139496	106139843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106139500_106139800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005039	chr11	-	740	3	ISM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	6038	-1	6038	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTCTGATAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	106140867	106139966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106140443_106140529_106140625_106140698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005040	chr11	+	659	5	ISM	ENSMUSG00000020708.13	ENST00000589763.1	1136	9	0	1026	0	-1026	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGGCTAAGACTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	106147670	106152859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005041	chr11	+	771	5	ISM	ENSMUSG00000020708.13	ENST00000589763.1	1136	9	4013	749	4013	-749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGGTATAAGCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	106151683	106153136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005042	chr11	+	780	5	ISM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	5300	434	4609	-373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTAACTGGAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	106152279	106153512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005043	chr11	+	593	5	ISM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	5776	235	5085	-174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGCCTCCACTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	106152755	106153711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005044	chr11	+	590	5	ISM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	5974	0	5283	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106152953	106153946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005045	chr11	-	1223	1	Genic_Genomic	ENSMUSG00000040548.17	novel	NA	NA	NA	NA	75762	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTTAGAGAAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	106394177	106392954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_106393000_106394200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005046	chr11	-	1527	3	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	100784	398	66997	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGCATCCAATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	106402942	106393353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106394545_106397692_106397814_106402727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005047	chr11	-	2046	5	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	44768	31817	10981	10111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGACTTCTTGGGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	106458958	106424772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106424844_106434997_106435264_106437489_106437830_106439539_106439741_106457790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005048	chr11	-	1235	2	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	6	65300	6	-23372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTGAAGACAAGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106503720	106458255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106459454_106503683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005049	chr11	+	339	2	ISM	ENSMUSG00000040528.16	ENSMUST00000086353.11	1348	7	3588	6271	3560	-5848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTTCTCCCTGGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	106645653	106652123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106645878_106652008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005050	chr11	+	354	1	ISM	ENSMUSG00000040528.16	ENSMUST00000106794.9	1514	7	15967	177	15967	20	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGACACTACTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	106658060	106658414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106658100_106658400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005051	chr11	-	299	2	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	6593	-26	6593	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGGACTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	106663557	106659078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106659298_106663477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005052	chr11	-	223	1	NIC	ENSMUSG00000020718.13	novel	1506	8	NA	NA	10849	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGGACTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	106659301	106659078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_106659100_106659300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005053	chr11	+	202	1	Genic_Genomic	ENSMUSG00000040528.16	novel	NA	NA	NA	NA	17332	7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAGGATTTGGAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	106659425	106659627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_106659400_106659600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005054	chr11	-	328	3	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	5587	4370	5587	-4370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCCCTTTCTTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	106664563	106663474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106663579_106664210_106664292_106664420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005055	chr11	-	430	3	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	2073	5310	2073	-5310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGATTTCACACAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	106668077	106664414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106664562_106666252_106666427_106667968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005056	chr11	-	295	3	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	1762	7259	1762	-7259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAACTTTACTACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	106668388	106666363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106666427_106667968_106668073_106668260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005057	chr11	-	406	2	ISM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	87	9156	87	-9156	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAACTGTGACAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	106670063	106668260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106668388_106669784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005058	chr11	-	2362	5	ISM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	4008	-2	4008	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATTTATTTATTCGC	NA	NA	NA	NA	NA	NA	NA	NA	106675350	106671178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005059	chr11	-	1905	1	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	6273	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	106673085	106671180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_106671200_106673100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005060	chr11	+	266	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	82	22557	82	-22557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTAAATATGGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	106681640	106687061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106681686_106683302_106683411_106686948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005061	chr11	+	296	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	1769	18647	1769	-18647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGCAGTGCCTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	106683327	106690971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106683411_106686948_106687060_106690869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005062	chr11	+	298	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	5422	17211	5422	-17211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGACACATTTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	106686980	106692407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106687060_106690869_106690970_106692288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005063	chr11	+	428	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	14259	9491	14259	-9491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTTGCTATGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	106695817	106700127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106695948_106697067_106697256_106700017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005064	chr11	+	286	2	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	18894	7442	18894	-7442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAACCCAGAGAGGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	106700452	106702176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106700584_106702021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005065	chr11	+	401	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	20462	4926	20462	-4926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGTCTCCACCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	106702020	106704692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106702176_106703221_106703362_106704586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005066	chr11	+	378	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	23045	3155	23045	-3155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCCTGCCTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	106704603	106706463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106704693_106705443_106705563_106706293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005067	chr11	+	375	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	25001	812	25001	-812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCTTGATGCCAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	106706559	106708806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106706635_106707478_106707632_106708659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005068	chr11	+	437	3	ISM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	27142	0	27142	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTTATTTATGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	106708700	106709618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_106708807_106709021_106709094_106709359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005069	chr11	+	264	1	NIC	ENSMUSG00000018372.14	novel	2597	19	NA	NA	27796	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTTATTTATGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	106709354	106709618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_106709400_106709600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005070	chr11	-	148	2	ISM	ENSMUSG00000018363.17	ENST00000398849.6	391	4	4328	0	4328	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAAGTGGACATCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	106755603	106750540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106750623_106755537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005071	chr11	-	169	2	ISM	ENSMUSG00000018363.17	ENST00000398849.6	391	4	474	4991	474	-4991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAATTTAAAATTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	106759457	106755531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106755604_106759360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005072	chr11	-	171	2	ISM	ENSMUSG00000018363.17	ENST00000398849.6	391	4	11	8881	11	-8881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCTTGGTTGTGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	106759920	106759421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106759495_106759822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005073	chr11	-	1173	5	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	8209	9	8037	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGACTTGCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106882158	106879463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005074	chr11	-	534	3	ISM	ENSMUSG00000018362.15	ENST00000676857.1	2074	11	9214	126	9023	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTGAACAGTTATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	106881172	106879577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106879800_106880145_106880300_106881014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005075	chr11	-	506	3	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	7533	2444	7361	-2444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGGTGTTAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	106882834	106881898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106882159_106882238_106882334_106882683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005076	chr11	-	309	2	ISM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	6878	3250	6706	-3250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTCTTGGAAACATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	106883489	106882704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106882953_106883428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005077	chr11	-	203	1	ISM	ENSMUSG00000018362.15	ENSMUST00000106768.2	541	3	2952	0	2952	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATATAGTTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	106887243	106887040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106887000_106887200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005078	chr11	-	317	3	FSM	ENSMUSG00000018362.15	ENSMUST00000106768.2	541	3	-149	373	23	-373	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGATGCTGAAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	106890344	106887413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_106887473_106888063_106888162_106890184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005079	chr11	+	1492	4	FSM	ENSMUSG00000078607.7	ENST00000580729.3	1510	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCCAAGTGCAAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	106916558	106921014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_106916796_106918635_106919095_106919191_106919384_106920410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005080	chr11	-	271	2	ISM	ENSMUSG00000040481.18	ENST00000579873.1	453	3	853	-5	853	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTTGCACTAAATAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	106934640	106933496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106933586_106934458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005081	chr11	-	89	1	NIC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	1904	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGCTTGCACTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	106933589	106933500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_106933500_106933600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005082	chr11	-	359	2	ISM	ENSMUSG00000040481.18	ENST00000579873.1	453	3	10	957	10	-957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGGCTGCTGACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	106935483	106934458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_106934652_106935317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005083	chr11	-	185	1	NIC	ENSMUSG00000040481.18	novel	11488	28	NA	NA	126	4	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCAGGCCGCCGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	107022280	107022095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_107022100_107022300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005084	chr11	-	274	2	FSM	ENSMUSG00000040481.18	ENST00000675608.1	599	2	291	34	-48	-34	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGAGCCATAGTACATA	NA	NA	NA	NA	NA	NA	NA	NA	107022454	107022133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_107022281_107022327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005085	chr11	-	219	1	Genic_Genomic	ENSMUSG00000018433.15	novel	NA	NA	NA	NA	22503	3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAAATGTCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	107057704	107057485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_107057500_107057700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005086	chr11	-	237	2	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	20989	853	20989	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTTCTGAACTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	107059218	107058341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107058468_107059107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005087	chr11	-	367	3	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	15927	4479	15927	-4479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCTACCATGACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107064280	107061967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107062011_107062440_107062520_107064035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005088	chr11	-	332	2	ISM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	15649	6596	15649	-6596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCTGTGACCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	107064558	107064084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107064288_107064429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005089	chr11	-	286	2	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	13656	6941	13656	-6941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTAGATCCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	107066551	107064429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107064556_107066391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005090	chr11	-	255	2	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	12524	8905	12524	-8905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGGTGTGGGTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	107067683	107066393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107066574_107067608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005091	chr11	-	213	2	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	10286	11913	10286	-11913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCAGTAGTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	107069921	107069401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107069488_107069794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005092	chr11	-	376	3	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	7513	13399	7513	-13399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGGAACCAGTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	107072694	107070887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107070945_107071738_107071928_107072564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005093	chr11	-	300	3	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	5751	14342	5751	-14342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGCGGTGTTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	107074456	107071830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107071928_107072564_107072710_107074398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005094	chr11	-	200	2	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	4493	16917	4493	-16917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGTAAGTGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	107075714	107074405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107074457_107075565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005095	chr11	-	264	2	ISM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	71	20190	71	-20190	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTTCAGACTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	107080136	107077678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107077749_107079942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005096	chr11	+	507	2	FSM	ENSMUSG00000086442.2	ENSMUST00000138702.2	534	2	32	-5	32	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCCTACATAGACGCC	NA	NA	NA	NA	NA	NA	NA	NA	107372773	107373938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_107373179_107373836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005097	chr11	+	1410	7	ISM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	9480	0	9387	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCGTGGAGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	107379789	107388999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005098	chr11	+	589	1	Genic_Genomic	ENSMUSG00000020720.14	novel	NA	NA	NA	NA	24198	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTCCAGACCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	107394600	107395189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_107394600_107395200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005099	chr11	-	1250	4	FSM	ENSMUSG00000020722.6	ENSMUST00000021065.6	1249	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTTCCCATATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	107607348	107594042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_107594717_107595130_107595269_107596602_107596678_107606985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005100	chr11	-	1241	4	NNC	ENSMUSG00000020722.6	novel	1249	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTTCCCATATGCC	NA	NA	NA	NA	NA	NA	NA	NA	107607347	107594043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_107594717_107595130_107595262_107596602_107596678_107606985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005101	chr11	-	211	1	ISM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	410331	0	46042	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGGCTGTCATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	107824423	107824212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_107824200_107824400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005102	chr11	+	893	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	21	0	21	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTCCTCTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	109253677	109271301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_109254083_109256361_109256589_109271040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005103	chr11	+	2555	3	ISM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	2764	3120	2764	-3120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATGCTGATGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	109256420	109289075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109256589_109283171_109283223_109286739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005104	chr11	+	2523	1	ISM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	36016	0	36016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTAGCACGACGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	109289672	109292195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109289700_109292200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005105	chr11	+	583	3	ISM	ENSMUSG00000020610.18	ENST00000359783.8	753	4	-5	701	-5	-701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTTAGAAAACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	109319620	109324879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109319911_109320749_109320879_109324715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005106	chr11	+	932	5	FSM	ENSMUSG00000020610.18	ENST00000359904.8	931	5	1	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGACGGGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	109319626	109325582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_109319911_109320489_109320668_109320749_109320879_109324715_109324880_109325405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005107	chr11	+	806	5	NNC	ENSMUSG00000020610.18	novel	931	5	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGTGGGACGGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	109319745	109325580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_109319911_109320489_109320668_109320749_109320879_109324715_109324875_109325405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005108	chr11	+	355	3	NNC	ENSMUSG00000020610.18	novel	753	4	NA	NA	183	-736	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTAGTGTTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	109319810	109324844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_109319911_109320749_109320876_109324715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005109	chr11	+	588	2	ISM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	8370	0	5794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	109325421	109327815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109325583_109327388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005110	chr11	+	427	1	ISM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	10617	1159	7761	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	109327388	109327815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109327400_109327800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005111	chr11	+	370	1	ISM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	11833	0	8977	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTTCGCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	109328604	109328974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109328600_109329000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005112	chr11	+	695	5	FSM	ENSMUSG00000020612.17	ENSMUST00000106676.8	962	5	-135	402	-135	-402	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTGCTGACATGCACT	NA	NA	NA	NA	NA	NA	NA	NA	109541265	109552177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_109541451_109544604_109544788_109550824_109550996_109551860_109551953_109552113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005113	chr11	+	220	2	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	36	15775	36	-7872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCATCGTGCAGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	109541782	109544707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109541900_109544604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005114	chr11	+	151	3	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	10166	7332	10166	571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTTAATGATAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	109551912	109553150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109551953_109552113_109552176_109553101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005115	chr11	+	212	3	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	10377	6595	10377	1308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTGGGGCATCGACC	NA	NA	NA	NA	NA	NA	NA	NA	109552123	109553887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109552176_109553101_109553149_109553774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005116	chr11	+	251	3	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	12094	3695	12094	-3695	internal_fragment	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGAGTTCTTCATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	109553840	109556787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109553934_109555584_109555646_109556690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005117	chr11	+	760	3	ISM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	14944	1671	14944	-1671	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTATTTCTTTATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	109556690	109558811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_109556813_109557469_109557552_109558255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005118	chr11	+	598	1	Genic_Genomic	ENSMUSG00000020612.17	novel	NA	NA	NA	NA	18145	7	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTTTCTTCCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	109559891	109560489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_109559900_109560500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005119	chr11	-	604	1	Genic_Genomic	ENSMUSG00000020614.14	novel	NA	NA	NA	NA	48730	3	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTCTCCAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	109564352	109563748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_109563700_109564400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005120	chr11	-	668	3	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	47086	96	47086	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTGGATCTGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	109565996	109563847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_109564391_109565448_109565509_109565931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005121	chr11	-	795	3	ISM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	386	11712	386	-11712	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACATGACTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	109612696	109575463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_109575515_109576168_109576354_109612137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005122	chr11	+	216	3	ISM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	83431	22766	83431	-22766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAGTTGACATTCCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	110373378	110381701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_110373432_110380970_110381020_110381587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005123	chr11	+	252	3	ISM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	93772	17222	93772	-17222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGTTGCTAAAACGATC	NA	NA	NA	NA	NA	NA	NA	NA	110383719	110387245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_110383839_110385120_110385173_110387164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005124	chr11	+	220	1	ISM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	114300	0	114300	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGCATAGTATTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	110404247	110404467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_110404200_110404500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005125	chr11	+	3672	2	FSM	ENSMUSG00000051497.16	ENSMUST00000106635.2	3671	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACATCCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	110888311	110918794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_110888424_110915234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005126	chr11	+	126	2	ISM	ENSMUSG00000000567.6	ENSMUST00000000579.3	4135	3	733	3885	733	-3885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACCACCCCGATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	112673782	112674701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_112673842_112674634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005127	chr11	-	1908	3	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	315187	-4	315187	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCCGTGCGATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	113141395	113135674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_113137322_113138545_113138705_113141293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005128	chr11	-	1646	1	NIC	ENSMUSG00000041654.16	novel	2664	10	NA	NA	319258	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	NA	NA	NA	NA	NA	NA	NA	NA	113137324	113135678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_113135700_113137300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005129	chr11	+	360	2	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	524	10926	365	-10378	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCCCCATCCTCTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	113540518	113542847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113540702_113542670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005130	chr11	+	213	2	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	3197	10234	3038	-9686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTATAACCTTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	113543191	113543539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113543233_113543367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005131	chr11	+	218	2	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	3390	8980	3231	-8432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTATCGAGTTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	113543384	113544793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113543539_113544729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005132	chr11	+	227	2	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	4793	7852	4634	-7304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGTGTGTCAGCGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	113544787	113545921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113544887_113545793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005133	chr11	+	273	2	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	5833	6992	5674	-6444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCATGTCCACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	113545827	113546781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113546005_113546685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005134	chr11	+	214	2	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	7393	5818	7234	-5270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCGCCTCCCTACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	113547387	113547955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113547475_113547828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005135	chr11	+	277	2	ISM	ENSMUSG00000018661.18	ENSMUST00000063776.14	1476	8	8044	3809	8044	-3809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGCAGACTCCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	113548197	113549416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113548363_113549304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005136	chr11	-	349	1	Genic_Genomic	ENSMUSG00000041629.8	novel	NA	NA	NA	NA	22457	1	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTAATTGGTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	113552492	113552143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_113552100_113552500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005137	chr11	+	200	1	ISM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	13579	0	13420	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATTTTTAAGAGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	113553573	113553773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113553600_113553800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005138	chr11	-	708	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	0	1911	0	117	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTTGCACACAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	113574981	113554055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_113554370_113568129_113568230_113574687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005139	chr11	-	465	2	FSM	ENSMUSG00000041629.8	ENST00000581110.1	459	2	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACAGCACCGAGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	113574950	113554167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_113554370_113574687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005140	chr11	-	448	2	NNC	ENSMUSG00000041629.8	novel	459	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGCCTACAGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	113574949	113554172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_113554359_113574687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005141	chr11	+	1651	2	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	59	5429	59	-5429	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAAGAGAGCATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	113575331	113580044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113575538_113578599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005142	chr11	+	1584	3	ISM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	3353	2196	3353	-2196	internal_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCGCTGGCTACTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	113578625	113583277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_113580048_113582554_113582660_113583220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005143	chr11	-	166	1	ISM	ENSMUSG00000041598.8	ENSMUST00000106616.2	3405	2	24301	2	24301	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113617843	113617677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_113617700_113617800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005144	chr11	-	576	3	NNC	ENSMUSG00000041598.8	novel	579	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAGGTGCAGCTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	113642623	113619240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_113619488_113620272_113620492_113642513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005145	chr11	-	582	3	FSM	ENSMUSG00000041598.8	ENST00000581014.1	579	3	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAGGTGCAGCTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	113642626	113619240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_113619491_113620272_113620492_113642513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005146	chr11	-	464	2	FSM	ENSMUSG00000041598.8	ENSMUST00000106616.2	3405	2	559	2382	559	-817	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAATGCCATGTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	113641585	113620057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_113620492_113641555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005147	chr11	-	834	1	ISM	ENSMUSG00000041592.17	ENSMUST00000041627.14	11287	45	289000	11	125925	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCTGAAGCGGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	113668044	113667210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_113667200_113668000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005148	chr11	+	369	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTCAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	114559352	114563158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005149	chr11	+	365	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114559372	114563157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005150	chr11	+	342	4	NNC	ENSMUSG00000057322.13	novel	364	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114559373	114563157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_114559465_114559731_114559793_114562559_114562683_114563090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005151	chr11	+	1523	3	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	35451	520	35451	-520	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGGAAAGACATGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	114601707	114611283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_114601823_114602585_114602665_114609954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005152	chr11	+	1387	1	ISM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	44160	0	44160	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCAGCTGAGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	114610416	114611803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_114610400_114611800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005153	chr11	+	1004	7	ISM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	2953	2519	2953	-2519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGTGTGGTCCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	114626689	114642748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005154	chr11	+	948	6	NNC	ENSMUSG00000034706.17	novel	1667	11	NA	NA	11388	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGAAACCGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	114635124	114645267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_114635267_114635880_114636004_114641163_114641388_114642611_114642753_114643718_114643830_114645060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005155	chr11	-	410	1	ISM	ENSMUSG00000000202.10	ENSMUST00000000206.4	1717	3	4271	0	4271	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCGGGTCTCAAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	114682452	114682042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_114682000_114682500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005156	chr11	+	1229	4	FSM	ENSMUSG00000051043.17	ENST00000342648.9	1257	4	28	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGCTTTGGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	114742015	114759922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_114742404_114755227_114755373_114757450_114757546_114759321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005157	chr11	+	1494	3	ISM	ENSMUSG00000051043.17	ENSMUST00000021071.14	2200	4	11739	160	11739	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCAAATAGCGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	114754414	114759762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_114755373_114757450_114757546_114759321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005158	chr11	-	765	5	ISM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	2294	0	86	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	115075864	115073657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005159	chr11	-	540	4	ISM	ENSMUSG00000015542.18	ENST00000580632.5	615	5	1712	-5	5	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCGAGCCTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	115075945	115073976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115074092_115074180_115074349_115075308_115075453_115075832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005160	chr11	-	490	5	FSM	ENSMUSG00000015542.18	ENST00000581136.5	512	5	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGGAAGGCCGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115075928	115073981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115074092_115074180_115074261_115074450_115074511_115075308_115075453_115075832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005161	chr11	-	446	4	ISM	ENSMUSG00000015542.18	ENST00000580632.5	615	5	33	225	33	-225	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCCAGAAACTTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	115077624	115074206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115074349_115075308_115075453_115075832_115075943_115077574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005162	chr11	+	1388	2	ISM	ENSMUSG00000045980.14	ENSMUST00000100235.9	4561	10	40992	2302	40992	-2302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGGGTCCCTGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	115119304	115135547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115119341_115134195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005163	chr11	+	1336	1	Genic_Genomic	ENSMUSG00000045980.14	novel	NA	NA	NA	NA	58202	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGTCTCCTCTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	115136514	115137850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_115136500_115137800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005164	chr11	-	747	5	ISM	ENSMUSG00000018861.9	ENST00000583917.5	1332	10	5798	0	5798	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCGTGCAAGACAAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	115161204	115159132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115161148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005165	chr11	-	741	5	ISM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	5744	268	5744	-268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCTAAAGCTGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	115161258	115159400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005166	chr11	-	816	6	ISM	ENSMUSG00000018861.9	ENST00000583917.5	1332	10	4430	298	4430	-298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAAGCCCTGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115162572	115159430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005167	chr11	-	715	6	ISM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	4176	1408	4176	-1408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTACTAGTCTAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	115162826	115160540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005168	chr11	+	1585	2	ISM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	10810	1300	10810	-1300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGCAGAGCAGGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	115283551	115285658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115283650_115284171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005169	chr11	+	1545	1	ISM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	12672	0	12672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAAGTGACCCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	115285413	115286958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115285400_115287000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005170	chr11	+	1792	5	FSM	ENSMUSG00000018858.16	ENST00000301585.10	638	5	2	-1156	2	-783	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGGAGGTAAAGCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	115294597	115302705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_115294835_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005171	chr11	+	286	1	NIC	ENSMUSG00000018858.16	novel	2596	6	NA	NA	6864	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	115301459	115301745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_115301500_115301700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005172	chr11	+	1284	1	Genic_Genomic	ENSMUSG00000018858.16	novel	NA	NA	NA	NA	7622	1	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCACTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	115302217	115303501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_115302200_115303500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005173	chr11	-	555	5	FSM	ENSMUSG00000034566.11	ENSMUST00000180072.8	486	5	-9	-60	-9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCTCTGAGTAGATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	115309342	115306513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005174	chr11	-	248	2	NNC	ENSMUSG00000034566.11	novel	625	6	NA	NA	2430	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115306903	115306514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115306700_115306840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005175	chr11	-	193	1	NIC	ENSMUSG00000034566.11	novel	682	7	NA	NA	2626	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115306707	115306514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_115306500_115306700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005176	chr11	-	371	4	ISM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	0	1164	0	-1105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGTGCGTGGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	115310788	115307678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115307751_115308664_115308762_115309211_115309343_115310717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005177	chr11	+	521	1	ISM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	10626	0	10604	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	115321579	115322100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115321600_115322100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005178	chr11	+	1158	3	FSM	ENSMUSG00000045775.16	ENST00000329783.9	1158	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAGCCTGGGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	115353431	115360973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_115353634_115355739_115355884_115360161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005179	chr11	+	1134	3	NNC	ENSMUSG00000045775.16	novel	1158	3	NA	NA	14	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGAGCCTGGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	115353444	115360972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_115353634_115355739_115355874_115360161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005180	chr11	+	1136	3	NNC	ENSMUSG00000045775.16	novel	1158	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGAGCCTGGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	115353446	115360972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_115353628_115355739_115355884_115360161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005181	chr11	+	1016	3	NNC	ENSMUSG00000045775.16	novel	1158	3	NA	NA	134	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAGCCTGGGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	115353564	115360973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_115353638_115355752_115355884_115360161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005182	chr11	+	562	3	FSM	ENSMUSG00000057219.12	ENST00000581078.1	561	3	5	-6	5	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCCACAGGTATAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	115366751	115379918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_115366854_115366947_115367028_115379538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005183	chr11	+	384	1	NIC	ENSMUSG00000057219.12	novel	2260	3	NA	NA	12788	6	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCCACAGGTATAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	115379534	115379918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_115379500_115379900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005184	chr11	+	905	1	ISM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	13896	0	13642	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTGTGCTAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	115380388	115381293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115380400_115381300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005185	chr11	-	855	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	115382685	115381245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005186	chr11	-	467	2	ISM	ENSMUSG00000020736.13	ENSMUST00000106530.8	836	5	846	0	846	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	115381795	115381245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115381596_115381678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005187	chr11	-	352	1	NIC	ENSMUSG00000020736.13	novel	836	5	NA	NA	1044	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	115381597	115381245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_115381200_115381600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005188	chr11	-	1365	4	NNC	ENSMUSG00000020737.13	novel	765	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGTTTTGTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	115405215	115388177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115389126_115392824_115392929_115393857_115394001_115405045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005189	chr11	-	1371	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGTTTTGTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	115405208	115388177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005190	chr11	-	1361	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115405204	115388178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115389111_115392801_115392929_115393857_115394001_115405045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005191	chr11	-	1309	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115405156	115388178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115389111_115392805_115392929_115393857_115394001_115405045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005192	chr11	-	1358	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115405186	115388178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115389126_115392801_115392929_115393857_115394001_115405045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005193	chr11	-	1382	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115405214	115388178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115389126_115392805_115392929_115393857_115394001_115405045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005194	chr11	-	1356	4	NNC	ENSMUSG00000020737.13	novel	1375	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115405209	115388178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115389126_115392826_115392929_115393857_115394001_115405045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005195	chr11	-	765	4	FSM	ENSMUSG00000020737.13	ENST00000356033.8	765	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGATGTCCTTGGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	115405127	115388683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115389126_115392830_115392929_115393857_115394001_115405045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005196	chr11	-	571	1	ISM	ENSMUSG00000020738.17	ENSMUST00000121185.8	911	4	12145	0	12145	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	115414498	115413927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115413900_115414500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005197	chr11	-	1057	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	-6	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	115427108	115413927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005198	chr11	-	1044	4	NNC	ENSMUSG00000020738.17	novel	1051	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTTCTCTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	115427102	115413930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115414596_115421171_115421244_115425377_115425506_115426923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005199	chr11	+	451	4	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	5267	5699	5267	-5699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGATGGGTCAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	115460526	115469112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115460598_115460824_115460947_115468755_115468891_115468989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005200	chr11	+	566	4	ISM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	17559	0	17559	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGATGGATGTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	115472818	115474811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115472866_115473702_115473855_115474151_115474254_115474546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005201	chr11	-	716	4	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	6553	2177	6553	-2177	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCTGAGGACAGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	115479267	115477820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115478028_115478231_115478543_115478761_115478830_115479137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005202	chr11	+	1884	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	79	-1	79	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTAACTTGCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	115494829	115498863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005203	chr11	+	621	4	FSM	ENSMUSG00000046756.11	ENST00000544148.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGCAGGAGAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	115495545	115497859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_115495739_115495848_115495913_115496815_115496964_115497643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005204	chr11	+	603	4	NNC	ENSMUSG00000046756.11	novel	621	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGCAGGAGAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	115495556	115497859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_115495739_115495848_115495913_115496822_115496964_115497643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005205	chr11	+	1346	2	ISM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	2034	52	1239	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAACAGGCTTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115496784	115498810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115496964_115497643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005206	chr11	+	1233	1	Genic_Genomic	ENSMUSG00000046756.11	novel	NA	NA	NA	NA	2086	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTAACTTGCCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	115497631	115498864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_115497600_115498900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005207	chr11	-	367	1	ISM	ENSMUSG00000020743.16	ENSMUST00000106507.9	1656	5	4048	171	1195	3	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCCATTGGTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	115499281	115498914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115498900_115499300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005208	chr11	-	523	3	FSM	ENSMUSG00000020743.16	ENST00000580571.5	727	3	6	198	6	93	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCGTCTTCCCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	115500470	115499115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115499440_115499886_115499980_115500364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005209	chr11	-	596	4	FSM	ENSMUSG00000020743.16	ENST00000649805.1	596	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTGCACATGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	115500476	115499208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115499440_115499882_115499980_115500105_115500262_115500364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005210	chr11	-	577	4	NNC	ENSMUSG00000020743.16	novel	596	4	NA	NA	15	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCCCAGGTCTGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	115500461	115499215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115499440_115499882_115499980_115500105_115500262_115500361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005211	chr11	-	817	1	ISM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	13151	0	13151	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACTGCAGACCATT	NA	NA	NA	NA	NA	NA	NA	NA	115505820	115505003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115505000_115505800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005212	chr11	-	1034	3	ISM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	10520	619	10520	-613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGGAGGAAACTGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	115508451	115505622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115506418_115507346_115507478_115508343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005213	chr11	-	595	1	ISM	ENSMUSG00000059923.14	ENSMUST00000106499.8	2333	4	54668	0	54668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTTCATTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	115535465	115534870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115534900_115535500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005214	chr11	-	671	4	FSM	ENSMUSG00000059923.14	ENST00000578961.5	675	4	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGTTAAGACCGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	115590214	115536567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115536781_115540596_115540720_115546183_115546282_115589977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005215	chr11	-	460	1	FSM	ENSMUSG00000083394.3	ENSMUST00000118352.3	483	1	23	0	23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTACGCAAAGAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115615611	115615151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115615200_115615600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005216	chr11	+	258	2	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	7536	9672	7536	-9672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGGGGCTGCAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	115679062	115679592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115679217_115679488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005217	chr11	+	275	2	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	9558	7261	9558	-7261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGGAGGGAGGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	115681084	115682003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115681149_115681792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005218	chr11	+	263	2	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	10400	6505	10400	-6505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCAGTGTCACTGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	115681926	115682759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115682003_115682572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005219	chr11	+	260	2	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	11253	5971	11253	-5971	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATCAAAGACACTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	115682779	115683293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115682889_115683142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005220	chr11	+	267	2	ISM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	12191	5187	12191	-5187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCAGCAGCTGGAGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	115683717	115684077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115683790_115683882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005221	chr11	+	165	1	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	17573	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGCCTCATGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	115689099	115689264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_115689100_115689300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005222	chr11	+	273	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	156	7417	156	-7417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGACTTCACCCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	115705737	115706193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115705906_115706000_115706065_115706152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005223	chr11	+	253	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	942	2559	942	-2559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCACCTGCTGCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	115706523	115711051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115706623_115707878_115707932_115710950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005224	chr11	+	384	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	2295	2176	2295	-2176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGGAGCTAAGGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	115707876	115711434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115707932_115710950_115711050_115711204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005225	chr11	+	510	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	6104	663	6104	-663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGAGCAGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	115711685	115712947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115711951_115712420_115712543_115712824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005226	chr11	+	441	3	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	6839	0	6839	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGCCAGCTGTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	115712420	115713610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115712543_115712824_115712942_115713408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005227	chr11	+	203	1	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	7826	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGCCAGCTGTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	115713407	115713610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_115713400_115713600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005228	chr11	+	438	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	10039	7215	10039	-7215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGTGCTGTCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	115735658	115737907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115735777_115736199_115736359_115737746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005229	chr11	+	459	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	10579	6990	10579	-6990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTCTGTGTAGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	115736198	115738132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115736359_115737746_115737910_115737996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005230	chr11	+	585	4	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	13405	4144	13405	-4144	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGGGAGCCTGGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	115739024	115740978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115739167_115740341_115740560_115740636_115740705_115740821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005231	chr11	+	552	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	15442	3137	15442	-3137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCCCAGGCTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	115741061	115741985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115741169_115741452_115741746_115741833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005232	chr11	+	474	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	15832	2145	15832	-2145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGGCCTGCAGAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	115741451	115742977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115741746_115741833_115741985_115742948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005233	chr11	+	446	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	17320	860	17320	-860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGTGACAGGGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	115742939	115744262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115743100_115743856_115743974_115744093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005234	chr11	+	462	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	18233	406	18233	-406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCTCAAGCCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	115743852	115744716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115743974_115744093_115744261_115744542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005235	chr11	+	522	3	ISM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	18490	-2	18490	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGCCCAGCAATGGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	115744109	115745124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115744261_115744542_115744808_115745018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005236	chr11	+	852	3	NNC	ENSMUSG00000048442.16	novel	654	3	NA	NA	0	-116	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGCACTTTATCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	115790882	115796979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_115791069_115795938_115796133_115796507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005237	chr11	+	548	3	NNC	ENSMUSG00000048442.16	novel	1113	3	NA	NA	47	-58	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGTAACCCAGGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	115790929	115796664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_115791169_115795980_115796133_115796507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005238	chr11	+	591	1	NIC	ENSMUSG00000048442.16	novel	1113	3	NA	NA	5477	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGCTGGGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	115796504	115797095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_115796500_115797100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005239	chr11	+	1217	3	ISM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	29221	1433	29221	-1433	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGATCCACCAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115853328	115856118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115853379_115854768_115854854_115855036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005240	chr11	+	1132	1	ISM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	32312	0	32312	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGGTTTTGTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	115856419	115857551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_115856400_115857600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005241	chr11	-	850	5	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	2383	0	2342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTCCTACTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	115901162	115899282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005242	chr11	-	906	6	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	1529	356	1488	-320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATACAGGTGGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	115902016	115899638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005243	chr11	-	872	6	ISM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	114	590	73	-554	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTTTCTGGGTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115903431	115899872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005244	chr11	-	335	1	Genic_Genomic	ENSMUSG00000016559.15	novel	NA	NA	NA	NA	1778	4	mono-exon	FALSE	NA	NA	NA	NA	NA	500	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGATCCATCTGCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	115913068	115912733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_115912700_115913100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005245	chr11	-	1998	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCTTGGCCACAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	115915331	115912782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005246	chr11	-	2161	4	NNC	ENSMUSG00000016559.15	novel	1993	4	NA	NA	-176	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGCCTTGGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	115915506	115912786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115914354_115914450_115914605_115914707_115914846_115915204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005247	chr11	-	1865	3	NNC	ENSMUSG00000016559.15	novel	1993	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGCCTTGGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	115914846	115912786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115914359_115914450_115914605_115914707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005248	chr11	-	1988	4	NNC	ENSMUSG00000016559.15	novel	1993	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGCCTTGGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	115915330	115912786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115914362_115914450_115914600_115914707_115914846_115915204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005249	chr11	-	1912	4	NIC	ENSMUSG00000016559.15	novel	1993	4	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGCCTTGGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	115915260	115912786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_115914362_115914461_115914605_115914707_115914846_115915204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005250	chr11	-	296	1	ISM	ENSMUSG00000016559.15	ENSMUST00000106454.8	2514	6	4536	1219	594	2	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAGCTATTAAGGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	115914252	115913956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115914000_115914300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005251	chr11	-	576	4	FSM	ENSMUSG00000016559.15	ENST00000589599.5	575	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	115915330	115914211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005252	chr11	-	568	4	NNC	ENSMUSG00000016559.15	novel	575	4	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	115915326	115914211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115914362_115914450_115914605_115914707_115914846_115915200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005253	chr11	-	249	2	NNC	ENSMUSG00000016559.15	novel	685	3	NA	NA	239	-43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATACGGGGGGAGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	115914607	115914255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115914359_115914461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005254	chr11	-	270	1	NIC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	-142	-990	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCGCGGCTCTGCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	115915472	115915202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_115915200_115915500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005255	chr11	-	558	3	NNC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	2	-1034	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCGCCTCGGTCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	115918786	115915246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115915545_115916130_115916282_115918677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005256	chr11	-	393	3	NNC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	48	-1149	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATAAATATGGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	115918740	115915361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_115915545_115916134_115916282_115918677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005257	chr11	-	908	1	ISM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	7515	0	7454	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	115970306	115969398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115969400_115970300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005258	chr11	-	938	3	ISM	ENSMUSG00000034341.18	ENST00000590221.5	1680	8	6588	215	6588	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCATGTCTGTCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	115971172	115969686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115970423_115970533_115970611_115971047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005259	chr11	-	360	3	ISM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	5669	1642	5608	-963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCAGCTGCCAGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	115972152	115971040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115971171_115971371_115971507_115972057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005260	chr11	-	362	3	ISM	ENSMUSG00000034341.18	ENST00000590221.5	1680	8	4525	1900	4525	-1294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTCCTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115973235	115971371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115971507_115972057_115972151_115973101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005261	chr11	-	340	3	ISM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	3046	1980	2985	-1980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCCAAGCCCTTAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	115974775	115972057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115972151_115973101_115973238_115974664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005262	chr11	-	374	3	ISM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	5	3019	5	-3019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGCTTAGCCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115977816	115973096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115973238_115974664_115974774_115977692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005263	chr11	-	832	1	ISM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	3654	0	3654	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	115997409	115996577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115996600_115997400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005264	chr11	-	856	3	ISM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	2790	130	2790	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAGGACTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	115998273	115996707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115997468_115997757_115997830_115998249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005265	chr11	-	531	3	ISM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	2681	576	2672	-576	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGCGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	115998391	115997153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115997468_115997757_115997833_115998249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005266	chr11	-	1185	4	ISM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	45	1672	45	-1672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGCTCCATTATGACT	NA	NA	NA	NA	NA	NA	NA	NA	116001018	115998249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_115998449_115998603_115998835_115999091_115999188_116000359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005267	chr11	+	902	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	NA	NA	NA	NA	NA	NA	NA	NA	116089680	116106144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005268	chr11	-	1577	1	ISM	ENSMUSG00000034282.4	ENSMUST00000037007.4	6384	22	15723	219	15675	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGATCCTGTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	116113180	116111603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116111600_116113200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005269	chr11	-	1667	3	ISM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	12654	1963	12654	-1963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTGGTGGTCACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	116116201	116113567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116115028_116115893_116115987_116116087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005270	chr11	-	361	3	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	5090	0	5042	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGGGTGAGCCTGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	116123813	116123225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116123316_116123455_116123564_116123650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005271	chr11	-	425	3	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	4563	228	4515	-228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCCCGCCCCTACGC	NA	NA	NA	NA	NA	NA	NA	NA	116124340	116123453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116123564_116123650_116123813_116124187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005272	chr11	-	405	3	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	3796	459	3748	-459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGACCCCGCTGGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	116125107	116123684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116123813_116124187_116124338_116124980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005273	chr11	-	435	3	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	3551	962	3503	-962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGATCCCCCTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	116125352	116124187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116124338_116124980_116125108_116125194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005274	chr11	-	374	3	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	3045	1764	2997	-1764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAACAGGTCAGGGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	116125858	116124989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116125108_116125194_116125350_116125757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005275	chr11	-	376	3	ISM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	10	2016	10	-2016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCGCGGCGGCTCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	116128893	116125241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116125350_116125757_116125858_116128725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005276	chr11	+	1067	2	FSM	ENSMUSG00000020793.6	ENSMUST00000055872.3	1940	2	476	397	476	-397	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGGAACCTGAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	116172240	116174367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_116172677_116173736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005277	chr11	-	309	1	ISM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	18425	0	18147	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTTCCTCTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	116179135	116178826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116178800_116179100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005278	chr11	-	475	3	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	16463	-193	16462	127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTCACCCAGAGTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	116180820	116179815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116180112_116180350_116180485_116180775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005279	chr11	-	246	3	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	16183	340	16182	-340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCATCTCCTCCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	116181100	116180348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116180485_116180775_116180818_116181032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005280	chr11	-	347	4	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	13870	1	13870	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAAGGCCAGGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	116183412	116181034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116181097_116181964_116182061_116182279_116182401_116183344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005281	chr11	-	282	4	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	12024	1244	12024	-1244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGACCTTGGCTCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	116185258	116182277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116182401_116183344_116183411_116184797_116184865_116185232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005282	chr11	-	318	3	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	11128	4198	11128	-4198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTACTCAGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	116186154	116185231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116185296_116185567_116185667_116185999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005283	chr11	-	338	3	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	10766	4595	10766	-4595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCTCCATGGAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	116186516	116185628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116185667_116185999_116186153_116186369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005284	chr11	-	479	4	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	6021	5335	6021	-5335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCCCTCCCTCCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	116191261	116186368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116186516_116187555_116187625_116188396_116188490_116191091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005285	chr11	-	319	2	ISM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	6297	7542	6019	-5335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCCCTCCCTCCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	116191263	116186368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116186516_116191091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005286	chr11	-	445	3	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	5150	7382	5150	-7382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTCCTCTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	116192132	116188415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116188490_116191091_116191260_116191929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005287	chr11	-	515	3	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	1408	11921	1407	-10896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGGGCTCCCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	116195875	116191929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116192153_116195402_116195509_116195689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005288	chr11	-	254	2	ISM	ENSMUSG00000020792.16	ENST00000509881.1	1748	16	0	14656	0	-14656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCCATGCAGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	116197282	116195689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116195875_116197213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005289	chr11	-	372	1	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	76280	0	76280	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGTGAACGTATTCG	NA	NA	NA	NA	NA	NA	NA	NA	116227550	116227178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116227200_116227600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005290	chr11	+	330	1	FSM	ENSMUSG00000081929.2	ENSMUST00000121547.2	456	1	126	0	126	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACTCTGGCCAATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	116273701	116274031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_116273700_116274000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005291	chr11	+	363	2	ISM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	35	4456	35	-4456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTCCCCAGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	116324954	116325447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116325255_116325384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005292	chr11	+	371	2	ISM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	463	778	463	-778	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGACTGGACGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	116325382	116329125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116325448_116328819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005293	chr11	+	276	1	ISM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	4708	0	4708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTTTTGTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	116329627	116329903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116329600_116329900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005294	chr11	+	1346	4	FSM	ENSMUSG00000061878.17	ENSMUST00000141798.4	1537	4	190	1	190	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATCCTATCCTGGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	116425755	116427500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_116425828_116425905_116426001_116426077_116426194_116426437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005295	chr11	+	813	1	ISM	ENSMUSG00000061878.17	ENSMUST00000141798.4	1537	4	1123	0	1123	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTATCCTGGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	116426688	116427501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116426700_116427500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005296	chr11	-	387	1	ISM	ENSMUSG00000020806.16	ENSMUST00000103029.10	3593	19	24797	852	7976	4	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGATTGTGTGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	116490229	116489842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116489800_116490200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005297	chr11	-	553	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	6876	125	6876	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCCTGGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116491329	116489971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116490265_116490886_116491041_116491223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005298	chr11	-	336	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	6691	1038	6691	-1038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACTTGGGAGACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	116491514	116490884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116491041_116491223_116491325_116491435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005299	chr11	-	334	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	5427	2263	5427	-2263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCAAGAGCCTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	116492778	116492109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116492218_116492419_116492582_116492714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005300	chr11	-	446	4	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	3538	2665	3538	-2665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGAGGGAGCGCGACATT	NA	NA	NA	NA	NA	NA	NA	NA	116494667	116492511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116492582_116492714_116492790_116493014_116493127_116494478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005301	chr11	-	426	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	3328	3167	3328	-3167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTAGGGTTCCTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	116494877	116493013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116493127_116494478_116494668_116494753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005302	chr11	-	451	3	NNC	ENSMUSG00000020806.16	novel	2482	17	NA	NA	2213	-4909	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACAGGGTGGGACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	116495992	116494755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_116494877_116495208_116495333_116495786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005303	chr11	-	375	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	2233	4970	2233	-4970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGAGGTGTCCCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	116495972	116494816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116494877_116495203_116495333_116495786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005304	chr11	-	534	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	1937	5356	1937	-5356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCATGGGGTGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	116496268	116495202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116495333_116495786_116495991_116496068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005305	chr11	-	416	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	1170	6026	1170	-6026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCTCTGGCTACTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	116497035	116495872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116495991_116496068_116496265_116496933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005306	chr11	-	386	3	ISM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	15	6294	15	-6294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCTGCCCAGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	116498190	116496140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116496265_116496933_116497059_116498053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005307	chr11	-	758	3	FSM	ENSMUSG00000020810.6	ENST00000589342.1	754	3	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTGAGTCACTTCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	116544785	116537475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_116537819_116540609_116540842_116544602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005308	chr11	-	712	3	NNC	ENSMUSG00000020810.6	novel	754	3	NA	NA	35	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGTGAGTCACTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	116544749	116537477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_116537811_116540609_116540842_116544602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005309	chr11	-	747	3	NNC	ENSMUSG00000020810.6	novel	754	3	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGTGAGTCACTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	116544781	116537477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_116537819_116540609_116540842_116544607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005310	chr11	-	583	2	ISM	ENSMUSG00000020810.6	ENST00000589342.1	754	3	3933	-1	3933	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGTGAGTCACTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	116540851	116537477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116537819_116540609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005311	chr11	-	2068	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTTCTTAAACGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116718873	116693883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005312	chr11	-	2040	4	NNC	ENSMUSG00000020814.14	novel	2063	4	NA	NA	-16	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCGTTCTTAAACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	116718855	116693886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_116695474_116702748_116702843_116707010_116707069_116718554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005313	chr11	-	2032	4	NNC	ENSMUSG00000020814.14	novel	2063	4	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCGTTCTTAAACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	116718846	116693886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_116695481_116702748_116702837_116707010_116707069_116718554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005314	chr11	-	415	3	ISM	ENSMUSG00000020814.14	ENSMUST00000047715.12	757	5	15996	0	4968	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGCTCCCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	116702843	116698554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116698795_116701613_116701694_116702748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005315	chr11	-	241	1	NIC	ENSMUSG00000020814.14	novel	757	5	NA	NA	9016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGCTCCCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	116698795	116698554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_116698600_116698800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005316	chr11	-	335	4	FSM	ENSMUSG00000020814.14	ENST00000589082.1	360	4	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGGAGGTTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	116707786	116701616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_116701694_116702748_116702843_116707010_116707062_116707673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005317	chr11	-	400	4	ISM	ENSMUSG00000020814.14	ENSMUST00000047715.12	757	5	111	3065	111	-3	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTAAGGAGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	116718728	116701619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116701694_116702748_116702843_116707010_116707069_116718554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005318	chr11	-	249	3	NNC	ENSMUSG00000020814.14	novel	360	4	NA	NA	21	-1139	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGGTAGGTCGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	116707790	116702755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_116702843_116707010_116707056_116707673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005319	chr11	-	610	3	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	2901	0	2645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116731374	116728257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116728590_116729815_116729955_116731235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005320	chr11	-	335	1	NIC	ENSMUSG00000056962.12	novel	1590	7	NA	NA	5427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116728592	116728257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_116728300_116728600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005321	chr11	-	1335	5	FSM	ENSMUSG00000056962.12	ENST00000585429.1	1075	5	-257	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCGCTGTCTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	116734276	116728452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_116728590_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005322	chr11	-	509	3	ISM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	2110	1595	1854	-1397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTAGTTCCAGCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	116732165	116729852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_116729955_116731235_116731372_116731894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005323	chr11	+	431	3	ISM	ENSMUSG00000090266.11	ENST00000586752.5	639	4	5	292	5	-292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATGGACAATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	116734525	116740126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116734634_116739726_116739965_116740041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005324	chr11	+	674	3	ISM	ENSMUSG00000090266.11	ENST00000586752.5	639	4	5206	-148	-1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACTCCCAATCATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	116739726	116740566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116739965_116740041_116740127_116740215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005325	chr11	+	555	3	FSM	ENSMUSG00000090266.11	ENST00000588302.5	546	3	0	-9	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATCTGAGGAAACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	116739727	116740444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_116739965_116740041_116740131_116740215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005326	chr11	-	605	1	Genic_Genomic	ENSMUSG00000034120.19	novel	NA	NA	NA	NA	2429	1	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTGGTCTTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	116741330	116740725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_116740700_116741300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005327	chr11	-	1236	3	FSM	ENSMUSG00000034120.19	ENST00000508921.7	1235	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCACTAGGCGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	116743759	116741192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_116741788_116742846_116743158_116743429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005328	chr11	-	1037	3	NNC	ENSMUSG00000034120.19	novel	1235	3	NA	NA	194	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGCACTAGGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	116743565	116741193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_116741788_116742846_116743158_116743433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005329	chr11	-	1083	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	0	816	0	-349	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGGATATTTGAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	116743920	116741542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_116741788_116742846_116743158_116743393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005330	chr11	+	125	2	ISM	ENSMUSG00000020818.17	ENSMUST00000153084.3	1194	11	8	19266	8	-19266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTGGATATACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	116744911	116745505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116745000_116745468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005331	chr11	+	125	2	ISM	ENSMUSG00000020818.17	ENSMUST00000153084.3	1194	11	588	15380	588	-15380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGTTTTACAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	116745491	116749391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116745525_116749299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005332	chr11	+	120	2	ISM	ENSMUSG00000020818.17	ENSMUST00000153084.3	1194	11	11825	5346	11825	-5346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAGAAAAGCCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	116756728	116759425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116756783_116759359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005333	chr11	+	112	2	ISM	ENSMUSG00000020818.17	ENSMUST00000153084.3	1194	11	14509	2613	14509	-2613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGGAACCCGGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	116759412	116762158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116759486_116762119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005334	chr11	+	130	2	ISM	ENSMUSG00000020818.17	ENSMUST00000153084.3	1194	11	17324	639	17324	-639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTAGCATTCTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	116762227	116764132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116762295_116764069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005335	chr11	+	104	2	ISM	ENSMUSG00000020818.17	ENSMUST00000153084.3	1194	11	19274	89	19274	-89	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGTTTTTTGGAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	116764177	116764682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_116764206_116764606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005336	chr11	+	562	1	FSM	ENSMUSG00000086859.5	ENSMUST00000182811.2	2153	1	1592	-1	1592	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	116969219	116969781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_116969200_116969800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005337	chr11	+	1426	2	ISM	ENSMUSG00000020823.17	ENSMUST00000103026.10	2589	17	41155	-520	41155	520	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGAGGGGCTGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	117047218	117048905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117047366_117047626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005338	chr11	+	1325	1	ISM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	42706	0	42706	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCCTTTTCTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	117048769	117050094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117048800_117050100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005339	chr11	+	713	2	ISM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	24238	10725	24238	-5121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGCTTCGAGTTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	117181309	117242414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117181863_117242254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005340	chr11	+	324	2	ISM	ENSMUSG00000059248.14	ENST00000592951.5	923	8	16627	4432	16627	-4432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCACCACGGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	117242251	117243103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117242447_117242974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005341	chr11	+	2041	3	ISM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	24267	11	21813	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	117247437	117253139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117247536_117250244_117250297_117251248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005342	chr11	+	635	1	Genic_Genomic	ENSMUSG00000059248.14	novel	NA	NA	NA	NA	26893	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTTTGGCAAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	117252517	117253152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_117252500_117253200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005343	chr11	-	639	2	FSM	ENSMUSG00000083705.3	ENSMUST00000165677.2	669	2	30	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGCTCTAGAGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	117312513	117311462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_117311954_117312365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005344	chr11	+	1179	2	FSM	ENSMUSG00000054418.7	ENSMUST00000155384.2	1784	2	129	476	129	-476	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATAGCTTTAAAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	117502201	117504207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_117502261_117503087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005345	chr11	+	1168	1	Genic_Genomic	ENSMUSG00000054418.7	novel	NA	NA	NA	NA	1444	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTTGTGACCAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	117503516	117504684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_117503500_117504700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005346	chr11	-	552	5	ISM	ENSMUSG00000025572.19	ENST00000591436.5	1009	8	3584	0	3584	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCAGCCTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	117661601	117659746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005347	chr11	-	621	5	ISM	ENSMUSG00000025572.19	ENST00000591436.5	1009	8	839	467	839	-467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAAGCCTGTTCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	117664346	117660213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_117660353_117661294_117661371_117661516_117661613_117663772_117663925_117664188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005348	chr11	-	1112	8	FSM	ENSMUSG00000025572.19	ENST00000306591.11	1140	8	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCTACCAGTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	117669839	117665046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669578_117669731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005349	chr11	+	1521	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGCTGGGTGGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	117700494	117705111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005350	chr11	+	828	1	ISM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	3788	0	3760	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	117704281	117705109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117704300_117705100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005351	chr11	-	620	1	Genic_Genomic	ENSMUSG00000025574.14	novel	NA	NA	NA	NA	9950	3	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTCCTTAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	117706968	117706348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_117706300_117707000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005352	chr11	-	976	5	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	1364	0	1364	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	117715554	117706351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005353	chr11	-	631	2	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	9831	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	117707087	117706351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_117706966_117707070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005354	chr11	-	645	5	ISM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	48	1589	48	-1589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCAGAGGAAGGTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	117716870	117707940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005355	chr11	-	616	4	NNC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	50	-1598	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGGACCTTCCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	117716868	117707949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_117708018_117712922_117713017_117715496_117715608_117716525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005356	chr11	+	1259	1	ISM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	12726	0	12726	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	117729475	117730734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117729500_117730700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005357	chr11	+	947	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGCTCTGTCTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	117740078	117746560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005358	chr11	+	735	4	NNC	ENSMUSG00000017716.16	novel	947	4	NA	NA	85	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGAGTTTTCCTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	117740229	117746505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_117740288_117740579_117740690_117743488_117743607_117746056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005359	chr11	-	822	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	23	1707	23	-1707	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCCACCTGCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	117859989	117858611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_117859145_117859700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005360	chr11	+	718	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	-297	23252	274	-23252	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTTAGGGCAGATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	117877391	117891104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117877840_117888266_117888457_117891024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005361	chr11	+	322	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	10580	21859	10580	-21859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGGTCTCCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	117888268	117892497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117888457_117891024_117891103_117892441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005362	chr11	+	358	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	13346	20990	13346	-20990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCACTTTGTGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	117891034	117893366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117891103_117892441_117892542_117893176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005363	chr11	+	472	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	14752	20009	14752	-20009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCCCATGAAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117892440	117894347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117892542_117893176_117893367_117894166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005364	chr11	+	595	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	15492	17931	15492	-17931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGCTGACGGAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	117893180	117896425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117893367_117894166_117894346_117896195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005365	chr11	+	737	3	NNC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	15521	-17756	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGCCTATGTGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	117893209	117896600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_117893363_117894166_117894346_117896195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005366	chr11	+	681	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	18598	3823	18598	-3823	internal_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGAACTTCTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	117896286	117910533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117896718_117905399_117905549_117910432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005367	chr11	+	654	3	ISM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	27709	-247	27709	-234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTTCTCAATGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	117905397	117914603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_117905549_117910432_117910563_117914230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005368	chr11	+	454	1	Genic_Genomic	ENSMUSG00000017715.12	novel	NA	NA	NA	NA	36696	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTGCTCAAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	117914384	117914838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_117914400_117914800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005369	chr11	-	752	1	Genic_Genomic	ENSMUSG00000017132.18	novel	NA	NA	NA	NA	28779	1	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGCTCTGCTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	118055742	118054990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_118055000_118055700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005370	chr11	-	1402	3	NNC	ENSMUSG00000017132.18	novel	2608	13	NA	NA	24524	-269	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACACCGGTTCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	118059997	118055269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_118055976_118056380_118056921_118059841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005371	chr11	-	466	4	ISM	ENSMUSG00000017132.18	ENST00000361101.8	2608	13	16408	1749	16408	-1749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTCTGCCAGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	118068113	118056749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005372	chr11	-	483	5	ISM	ENSMUSG00000017132.18	ENST00000591455.5	2604	13	10780	4925	10780	-4925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGTGGTGGAAGGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	118073741	118059925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005373	chr11	-	2010	1	Genic_Genomic	ENSMUSG00000017466.10	novel	NA	NA	NA	NA	52436	8	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGATTCCTTGGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	118193896	118191886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_118191900_118193900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005374	chr11	-	2284	4	ISM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	35295	881	35295	-881	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACAGTGCCTGTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	118211037	118192775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005375	chr11	-	884	1	ISM	ENSMUSG00000033880.12	ENSMUST00000043722.10	2330	6	8177	281	4648	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACATGGTGTAAATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	118284741	118283857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_118283900_118284700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005376	chr11	-	1004	2	ISM	ENSMUSG00000033880.12	ENST00000591778.5	1406	3	305	224	305	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATCCAGCTACTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	118289084	118284082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_118284949_118288946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005377	chr11	-	1293	1	ISM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	11471	0	8213	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	118298407	118297114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_118297100_118298400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005378	chr11	-	1472	3	ISM	ENSMUSG00000025575.15	ENSMUST00000164927.2	1379	4	4500	-375	4500	375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGGGGGGGGGGGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	118302120	118298094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_118298921_118299506_118299711_118301678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005379	chr11	+	2600	4	FSM	ENSMUSG00000017446.15	ENST00000581774.5	1155	4	9	-1454	9	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTCAATGTACGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	118327570	118340631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_118327826_118334476_118334677_118337326_118337467_118338626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005380	chr11	+	2131	1	Genic_Genomic	ENSMUSG00000017446.15	novel	NA	NA	NA	NA	11098	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCGTTTTTTGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	118338659	118340790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_118338700_118340800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005381	chr11	+	665	1	ISM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	11716	0	9652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTTGAGTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	118379370	118380035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_118379400_118380000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005382	chr11	-	652	1	Genic_Genomic	ENSMUSG00000025576.18	novel	NA	NA	NA	NA	119794	3	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCCGATTTAGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	118381232	118380580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_118380600_118381200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005383	chr11	-	882	4	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	113721	875	113721	522	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTATGTGAGAAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	118387305	118381458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_118382068_118384975_118385055_118386043_118386109_118387176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005384	chr11	-	740	5	FSM	ENSMUSG00000039989.8	ENST00000448310.1	745	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGGAGCTGCAGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118977003	118972777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_118973128_118973342_118973394_118975388_118975455_118976582_118976627_118976774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005385	chr11	-	581	3	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	5585	-4	5585	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGCCCTTGACCATCG	NA	NA	NA	NA	NA	NA	NA	NA	119042034	119038389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119038643_119039756_119039904_119041853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005386	chr11	-	504	3	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	2729	1362	2729	-1362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGCCCTGCCCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	119044890	119039755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119039904_119041853_119042034_119044714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005387	chr11	-	504	3	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	1575	3460	1575	-3460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGTGGTGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	119046044	119041853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119042034_119044714_119044902_119045907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005388	chr11	-	467	4	ISM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	23	6411	23	-6411	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGACACCTTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	119047596	119044804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119044902_119045907_119046043_119046845_119046953_119047468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005389	chr11	-	912	7	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	5683	0	5683	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119185232	119179188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005390	chr11	-	914	8	ISM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	4550	297	4550	-297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTTGGCGGCTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	119186365	119179485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005391	chr11	+	545	5	FSM	ENSMUSG00000039850.17	ENST00000522751.5	547	5	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGGCTGTGGTGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	119382590	119393655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_119382783_119390671_119390712_119391416_119391530_119393118_119393188_119393524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005392	chr11	+	529	4	NNC	ENSMUSG00000039850.17	novel	484	4	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGGTATGGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	119382596	119393646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_119382822_119391416_119391530_119393118_119393188_119393524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005393	chr11	+	357	3	ISM	ENSMUSG00000039850.17	ENST00000520284.5	484	4	-1	465	-1	-465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCCAGAAAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	119382608	119393188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119382783_119391416_119391530_119393118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005394	chr11	+	161	2	NNC	ENSMUSG00000039850.17	novel	484	4	NA	NA	99	-2176	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCCTGCAGGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	119382708	119391477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_119382809_119391416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005395	chr11	+	192	2	ISM	ENSMUSG00000039850.17	ENSMUST00000064513.9	954	7	1071	3600	1071	-465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCCAGAAAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	119391407	119393188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119391530_119393118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005396	chr11	+	192	2	NNC	ENSMUSG00000039850.17	novel	484	4	NA	NA	2784	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGGCTGTGGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	119393120	119393653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_119393192_119393532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005397	chr11	-	180	2	Antisense	novelGene_ENSMUSG00000039850.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCACAATCTGGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	119393653	119393129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr11_-_119393179_119393522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005398	chr11	+	135	1	NIC	ENSMUSG00000039850.17	novel	5070	9	NA	NA	3185	2	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGTGGTGGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	119393521	119393656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_+_119393500_119393700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005399	chr11	-	1140	3	FSM	ENSMUSG00000085081.2	ENSMUST00000127450.2	1174	3	34	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTCCAACATGAATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	119725157	119711637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_119712591_119716652_119716798_119725115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005400	chr11	+	998	4	ISM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	2892	125	2892	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGGAACAAAGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119807527	119810249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119807573_119807754_119807836_119808809_119808865_119809432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005401	chr11	+	829	1	Genic_Genomic	ENSMUSG00000025371.13	novel	NA	NA	NA	NA	4911	1	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTTTAGTGTCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	119809546	119810375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_119809500_119810400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005402	chr11	+	557	4	ISM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	142	21783	142	-21783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAAGAGACGGTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	119833730	119871664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005403	chr11	+	384	5	ISM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	14346	20539	14346	-20539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAGTAAGAACCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	119847934	119872908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005404	chr11	+	358	3	ISM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	38629	8779	38629	-8779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGTGAGCTAGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	119872217	119884668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119872291_119872814_119872953_119884521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005405	chr11	+	516	3	ISM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	39226	5874	39226	-5874	internal_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCTGGGGCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	119872814	119887573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119872953_119884521_119884675_119887348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005406	chr11	+	487	3	ISM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	51026	5531	51026	-5531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGCCTGAGGGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	119884614	119887916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119884675_119887348_119887574_119887714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005407	chr11	+	358	2	ISM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	53751	5609	53751	-5609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGCTGAGCGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	119887339	119887838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119887574_119887714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005408	chr11	+	777	6	ISM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	54125	1443	54125	-1443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTCTTGGGTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119887713	119892004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005409	chr11	+	366	3	ISM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	56391	237	56391	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGCTGGATCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119889979	119897371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119890124_119891377_119891413_119897184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005410	chr11	+	651	1	ISM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	59208	0	59208	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTGGTCTGTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	119892796	119893447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119892800_119893400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005411	chr11	+	409	2	ISM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	60293	45	60293	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCTCACGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	119893881	119897563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119893912_119897184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005412	chr11	+	368	1	ISM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	63652	0	63652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119897240	119897608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119897200_119897600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005413	chr11	-	343	1	ISM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	7858	0	7858	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	119981699	119981356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119981400_119981700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005414	chr11	-	373	2	ISM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	5742	1248	5742	-1248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGGTCCGAACCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	119983815	119982604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119982839_119983676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005415	chr11	-	338	2	ISM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	4456	3159	4456	-3159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAATAGGTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	119985101	119984515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_119984692_119984939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005416	chr11	+	568	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	18	195	2	147	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTGGGTGTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	119989771	119991336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_119989892_119989973_119990085_119990999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005417	chr11	+	397	1	ISM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	1381	0	1365	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGGCTGGAGAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	119991134	119991531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_119991100_119991500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005418	chr11	+	1501	1	ISM	ENSMUSG00000085636.2	ENSMUST00000140273.2	1657	2	278	1	278	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAGGAAAAGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	120041665	120043166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120041700_120043200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005419	chr11	-	613	1	Genic_Genomic	ENSMUSG00000062825.16	novel	NA	NA	NA	NA	1790	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTGGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120237127	120236514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_120236500_120237100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005420	chr11	-	1244	3	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	739	223	739	119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3499	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTGGTTTCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120238178	120236739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120237360_120237462_120237645_120237736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005421	chr11	-	189	2	NNC	ENSMUSG00000062825.16	novel	1827	5	NA	NA	1383	-30	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCCATCGTCCACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	120237534	120237246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120237360_120237458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005422	chr11	-	312	2	NNC	ENSMUSG00000062825.16	novel	1827	5	NA	NA	1047	-246	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCTACCACCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	120237870	120237462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120237637_120237732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005423	chr11	-	849	3	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	213	961	213	-261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATGAAGATTAAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	120238704	120237477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120237645_120237736_120238176_120238461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005424	chr11	-	199	2	NNC	ENSMUSG00000062825.16	novel	1827	5	NA	NA	1092	-322	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATGTACCCAGGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	120237825	120237538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120237645_120237732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005425	chr11	-	765	3	ISM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	-40	1297	-40	-597	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGACGGGCAGGTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	120238957	120237813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120238176_120238461_120238702_120238794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005426	chr11	-	341	3	ISM	ENSMUSG00000062825.16	ENST00000575994.6	1216	6	7	1349	7	-1349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACACCTTCTACAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	120250804	120238565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120238702_120238794_120238958_120250762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005427	chr11	-	315	3	ISM	ENSMUSG00000062825.16	ENSMUST00000062147.14	876	5	-70	1778	-3	-1420	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGACCCTGAAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	120239371	120238636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120238702_120238794_120238924_120239250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005428	chr11	+	275	1	ISM	ENSMUSG00000043644.5	ENSMUST00000143813.2	619	2	2238	0	2238	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAGCTCAACGTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	120241741	120242016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120241700_120242000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005429	chr11	-	1284	1	ISM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	56055	0	55990	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCTCCCAGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	120272479	120271195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120271200_120272500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005430	chr11	-	815	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGGGGCTTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120348895	120347430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120347989_120348638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005431	chr11	-	674	4	ISM	ENSMUSG00000057594.13	ENSMUST00000076921.7	911	5	360	-1	360	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCACCAAGAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	120358066	120356262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005432	chr11	-	442	3	ISM	ENSMUSG00000057594.13	ENST00000573715.2	550	4	354	-6	354	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCTGGCTCCAGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	120357241	120356514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120356648_120356809_120356926_120357048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005433	chr11	-	421	3	ISM	ENSMUSG00000057594.13	ENST00000573715.2	550	4	2	289	2	-289	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGGTCTAAGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120357593	120356809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120356926_120357048_120357240_120357479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005434	chr11	-	331	3	NNC	ENSMUSG00000057594.13	novel	550	4	NA	NA	65	-312	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTCATACTCTTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	120357530	120356832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120356926_120357048_120357236_120357479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005435	chr11	-	357	3	NNC	ENSMUSG00000057594.13	novel	550	4	NA	NA	40	-318	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTCCTCATACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	120357555	120356838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120356926_120357048_120357243_120357479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005436	chr11	+	1092	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	60	164	60	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAATTTCCATATAGATA	NA	NA	NA	NA	NA	NA	NA	NA	120375498	120379727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005437	chr11	+	627	1	Genic_Genomic	ENSMUSG00000039640.8	novel	NA	NA	NA	NA	3832	6	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAACCCTGGCCCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	120379270	120379897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_120379300_120379900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005438	chr11	+	430	5	ISM	ENSMUSG00000025792.10	ENST00000331531.9	891	11	4651	-1	4651	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTGACATGGCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	120387459	120388993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120387533_120387839_120387952_120388196_120388288_120388745_120388803_120388896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005439	chr11	-	605	1	Genic_Genomic	ENSMUSG00000061111.9	novel	NA	NA	NA	NA	1336	1	mono-exon	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACCCTGAAGCCCGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	120434293	120433688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_120433700_120434300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005440	chr11	-	280	2	ISM	ENSMUSG00000061111.9	ENST00000538396.5	796	4	1053	293	1053	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCCTTGCCCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	120434576	120434008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120434185_120434472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005441	chr11	-	671	2	FSM	ENSMUSG00000061111.9	ENST00000573478.5	971	2	-1	301	-1	-301	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCACTGTCCATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	120435630	120434027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120434575_120435506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005442	chr11	-	591	2	ISM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	5713	381	789	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTGGCTCTCTCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	120434840	120434094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120434575_120434729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005443	chr11	-	185	2	NNC	ENSMUSG00000061111.9	novel	822	4	NA	NA	1055	-370	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTGGCTCTCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	120434574	120434096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120434180_120434472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005444	chr11	-	684	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	15	506	15	-493	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCCTTGCCCCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120440538	120434219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005445	chr11	-	556	3	FSM	ENSMUSG00000025129.3	ENSMUST00000026121.3	771	3	122	93	49	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATACCCATTTCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120441836	120440897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120441156_120441437_120441589_120441689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005446	chr11	-	626	3	FSM	ENSMUSG00000025129.3	ENST00000570394.1	623	3	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTGGGGCTTGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	120441884	120441022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120441303_120441437_120441589_120441689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005447	chr11	-	626	3	NNC	ENSMUSG00000025129.3	novel	623	3	NA	NA	5	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCTTTGGGGCTTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	120441880	120441024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120441309_120441437_120441589_120441689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005448	chr11	-	907	1	Genic_Genomic	ENSMUSG00000025130.12	novel	NA	NA	NA	NA	11612	2	mono-exon	FALSE	NA	NA	NA	NA	NA	918	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGCTGCTTTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	120452028	120451121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_120451100_120452000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005449	chr11	-	1677	6	ISM	ENSMUSG00000025130.12	ENST00000681693.1	2333	11	9082	-1	9082	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATTGTCACTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120454558	120451130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005450	chr11	-	950	3	NNC	ENSMUSG00000025130.12	novel	770	4	NA	NA	10269	-228	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGCTTGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120453371	120451407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120452087_120452986_120453074_120453187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005451	chr11	-	1072	4	ISM	ENSMUSG00000025130.12	ENST00000679439.1	2279	10	9515	233	9515	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACAGTGTGGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120454125	120451412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120452087_120453189_120453372_120453480_120453602_120454030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005452	chr11	-	824	6	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	4849	1394	4810	-1394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTCCACCCTATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120458830	120453187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005453	chr11	-	827	6	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	4544	1687	4505	-1687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGGATCTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	120459135	120453480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005454	chr11	-	881	6	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	1140	2253	1101	-2253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGCAAGATCAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120462539	120454046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005455	chr11	-	1275	6	ISM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	-400	2667	0	-2667	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAGAGCAGCCGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120464079	120454460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005456	chr11	-	1869	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	1	-3	1	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCTGTGCAGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120472449	120468926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005457	chr11	-	1762	5	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTCTGTGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120471220	120468929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120470257_120470341_120470398_120470488_120470571_120470792_120470877_120471007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005458	chr11	-	679	1	ISM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	2838	4	1588	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTGTGTGGTCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	120469612	120468933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120468900_120469600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005459	chr11	-	1585	5	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	143	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGGATTGTGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	120471057	120468938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120470257_120470341_120470398_120470493_120470571_120470792_120470877_120471007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005460	chr11	-	1320	6	FSM	ENSMUSG00000025132.14	ENST00000541078.6	1357	6	37	0	37	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCTAACTCTTAACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120472099	120469575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471327_120472004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005461	chr11	-	631	2	FSM	ENSMUSG00000025132.14	ENST00000581876.5	624	2	-4	-3	-4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCCCAGGCCTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	120471204	120469822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120470257_120471007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005462	chr11	-	617	2	NNC	ENSMUSG00000025132.14	novel	624	2	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCCAGCCCAGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	120471189	120469825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120470257_120471003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005463	chr11	-	666	4	ISM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	45	1612	-25	-721	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTTTGTCTTGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	120472161	120470546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120470571_120470792_120470877_120471007_120471220_120471815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005464	chr11	+	1840	3	FSM	ENSMUSG00000025135.13	ENST00000571570.5	387	3	-4	-1449	-4	1105	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACGGTGTCAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	120488557	120497707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_120488670_120490067_120490195_120496106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005465	chr11	+	379	3	NNC	ENSMUSG00000025135.13	novel	387	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGCCACTTCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	120488562	120496258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_120488670_120490074_120490195_120496106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005466	chr11	+	964	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAAAACCTTCATCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	120489356	120496603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_120489697_120490067_120490195_120496106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005467	chr11	+	966	3	NNC	ENSMUSG00000025135.13	novel	962	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTTCATCGTA	NA	NA	NA	NA	NA	NA	NA	NA	120489357	120496602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_120489701_120490067_120490195_120496106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005468	chr11	+	954	3	NNC	ENSMUSG00000025135.13	novel	962	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTTCATCGTA	NA	NA	NA	NA	NA	NA	NA	NA	120489358	120496602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_120489697_120490074_120490195_120496106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005469	chr11	+	959	3	NNC	ENSMUSG00000025135.13	novel	962	3	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAAAACCTTCATCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	120489358	120496603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_+_120489701_120490074_120490195_120496106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005470	chr11	+	1652	1	Genic_Genomic	ENSMUSG00000025135.13	novel	NA	NA	NA	NA	8018	3	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTTTGATCATGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120497375	120499027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_120497400_120499000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005471	chr11	-	384	1	ISM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	7466	0	7455	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	120501296	120500912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120500900_120501300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005472	chr11	-	407	2	ISM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	6957	41	6957	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCCGTGGACAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	120501794	120501283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120501598_120501701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005473	chr11	-	359	4	ISM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	5322	940	5322	-940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCAAGGTGAGGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	120503429	120502182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120502240_120502453_120502532_120502826_120502910_120503288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005474	chr11	-	319	3	ISM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	1987	3914	1987	-3914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCCAGGGAGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120506764	120505156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120505224_120506116_120506279_120506674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005475	chr11	-	375	3	ISM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	25	4887	25	-4887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCACGGCAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	120508726	120506129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120506279_120506674_120506764_120508589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005476	chr11	-	665	1	ISM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	7819	0	4367	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	120516607	120515942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120515900_120516600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005477	chr11	-	1736	7	FSM	ENSMUSG00000025140.16	ENST00000403172.8	962	7	1	-775	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCAGAGCTCCAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	120534590	120530239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005478	chr11	-	477	3	ISM	ENSMUSG00000025140.16	ENST00000577756.5	794	6	1353	0	1353	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120532699	120531014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120531175_120532254_120532348_120532475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005479	chr11	-	329	3	NNC	ENSMUSG00000025140.16	novel	794	6	NA	NA	1505	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120532547	120531014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr11_-_120531175_120532250_120532348_120532475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005480	chr11	-	998	7	ISM	ENSMUSG00000025140.16	ENST00000619204.4	1055	8	499	0	-40	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGCCAGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120534092	120531014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005481	chr11	+	170	2	ISM	ENSMUSG00000025142.19	ENSMUST00000106160.9	1550	14	885	30933	885	-30933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGACCAGGTGAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	120568371	120569335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120568452_120569245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005482	chr11	+	228	2	ISM	ENSMUSG00000025142.19	ENSMUST00000106160.9	1550	14	12560	8192	12560	-8192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGACGCTTGGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	120580046	120592076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120580168_120591969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005483	chr11	+	225	2	ISM	ENSMUSG00000025142.19	ENSMUST00000106160.9	1550	14	24482	7878	24482	-7878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAATGGCTTTCTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120591968	120592390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120592110_120592306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005484	chr11	-	143	1	ISM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	2648	0	2648	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120601910	120601767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120601800_120601900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005485	chr11	-	603	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120604561	120601767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005486	chr11	-	827	5	ISM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	1026	0	1026	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120603532	120601767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005487	chr11	-	115	2	ISM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	1293	389	1255	-389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAAGCTAAGGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	120616814	120616613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120616682_120616767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005488	chr11	-	894	7	ISM	ENSMUSG00000025150.11	ENSMUST00000026148.9	1110	8	1033	0	1033	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCCATTGCACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	120621907	120620314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120620652_120620740_120620859_120621082_120621148_120621249_120621350_120621443_120621487_120621570_120621726_120621831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005489	chr11	+	567	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	0	1059	0	-402	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGGATTCGGCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	120653619	120654186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_120653600_120654200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005490	chr11	+	326	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	24	-586	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCTCCCAGGAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120653643	120654002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_120653817_120653849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005491	chr11	+	971	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	659	-4	-190	4	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGAGTCCTGCCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	120654278	120655249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_120654300_120655200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005492	chr11	-	241	1	ISM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	3219	0	2371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTGGCTCCTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120671814	120671573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120671600_120671800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005493	chr11	-	491	3	ISM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	1653	923	805	306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGTCCAGGAAGAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	120673380	120672496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120672730_120672804_120672891_120673208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005494	chr11	-	505	4	ISM	ENSMUSG00000025158.8	ENST00000429557.7	593	5	195	0	195	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGCACCCTGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120673990	120672802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120672891_120673208_120673375_120673454_120673544_120673828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005495	chr11	-	483	4	ISM	ENSMUSG00000025158.8	ENST00000429557.7	593	5	-11	439	-11	-439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTGCCGTCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	120674196	120673241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120673375_120673454_120673544_120673828_120673987_120674093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005496	chr11	-	331	3	ISM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	1050	1710	202	-481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCATAGCCCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120673983	120673283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120673375_120673454_120673544_120673832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005497	chr11	+	710	3	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	3729	-4	3729	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTCCTTTCCTTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120679069	120679932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120679208_120679287_120679423_120679495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005498	chr11	-	620	4	ISM	ENSMUSG00000025155.16	ENSMUST00000026151.11	1930	14	5044	-1	5044	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	120682177	120680026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005499	chr11	-	362	1	NIC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	6833	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	120680388	120680026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_120680000_120680400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005500	chr11	-	418	2	ISM	ENSMUSG00000025155.16	ENSMUST00000106135.8	1863	14	15	6275	7	-6270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGGGACTGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	120687214	120686301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120686550_120687044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005501	chr11	+	674	2	ISM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	6727	2121	6713	-1896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTACCTCTTCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	120846619	120847705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120846769_120847180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005502	chr11	+	895	2	ISM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	7671	636	7657	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGACCCAGCCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	120847563	120849190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120847949_120848680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005503	chr11	+	644	1	ISM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	9290	0	9276	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCTTCCAACCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120849182	120849826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_120849200_120849800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005504	chr11	+	793	1	Genic_Genomic	ENSMUSG00000025161.17	novel	NA	NA	NA	NA	10997	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGATGTAAATATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	120850903	120851696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_+_120850900_120851700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005505	chr11	-	1495	1	NIC	ENSMUSG00000025162.19	novel	2674	10	NA	NA	27849	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	120854069	120852574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_120852600_120854100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005506	chr11	-	1528	2	ISM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	23242	724	23004	-724	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACATGTGTGTGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	120858914	120853298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120854733_120858820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005507	chr11	-	149	2	ISM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	26073	2081	26073	-2081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATGCATGGCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	120855845	120854655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120854733_120855773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005508	chr11	-	204	2	ISM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	22957	3199	22957	-3199	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGCTCGTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120858961	120855773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120855837_120858820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005509	chr11	-	173	2	ISM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	21949	6334	21949	-6334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCGGCTGCACCGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	120859969	120858908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120858961_120859848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005510	chr11	-	174	2	ISM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	19442	7356	19442	-7356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTCTACAGCTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	120862476	120859930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120860021_120862392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005511	chr11	-	192	2	ISM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	18623	9868	18623	-9868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGGCTTCTCCTACGAC	NA	NA	NA	NA	NA	NA	NA	NA	120863295	120862442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120862542_120863202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005512	chr11	-	152	2	ISM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	17211	11355	17211	-11355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTCTACATCATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	120864707	120863929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120864021_120864646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005513	chr11	-	142	2	ISM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	127	21484	127	-21484	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTTCATGTTCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	120881791	120874058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_120874170_120881760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005514	chr11	+	188	2	ISM	ENSMUSG00000039307.17	ENST00000327949.15	1518	12	62	10270	62	-10270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCAAAGCTAGCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121098523	121102977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121098602_121102867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005515	chr11	+	155	2	ISM	ENSMUSG00000039307.17	ENST00000327949.15	1518	12	4444	8356	4444	-8356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGTGAGTGGGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	121102905	121104891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121102978_121104808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005516	chr11	+	120	2	ISM	ENSMUSG00000039307.17	ENSMUST00000106117.8	2149	13	9585	7819	6384	-7593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGCTGAGTCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	121104845	121105654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121104897_121105585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005517	chr11	+	125	2	ISM	ENSMUSG00000039307.17	ENST00000327949.15	1518	12	7663	5441	7663	-5441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTAGCCAGCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	121106124	121107806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121106162_121107718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005518	chr11	+	162	2	ISM	ENSMUSG00000039307.17	ENST00000327949.15	1518	12	11011	2511	11011	-2511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGTACATGGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	121109472	121110736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121109565_121110666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005519	chr11	+	117	2	ISM	ENSMUSG00000039307.17	ENST00000327949.15	1518	12	12217	1293	12217	-1293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTCAAGCCTGGAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	121110678	121111954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121110750_121111908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005520	chr11	+	143	2	ISM	ENSMUSG00000039307.17	ENST00000327949.15	1518	12	13488	1081	13488	-1081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTCCCACGTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	121111949	121112166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121111988_121112061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005521	chr11	+	135	2	ISM	ENSMUSG00000039307.17	ENST00000327949.15	1518	12	13632	856	13632	-856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACATACAGCCGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	121112093	121112391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121112164_121112326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005522	chr11	+	165	2	ISM	ENSMUSG00000039307.17	ENST00000327949.15	1518	12	13889	110	13889	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGAGTCTGCAGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	121112350	121113137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121112417_121113038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005523	chr11	-	827	1	ISM	ENSMUSG00000039294.15	ENSMUST00000106115.8	2239	7	5891	0	4998	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	121114240	121113413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_121113400_121114200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005524	chr11	-	129	1	NIC	ENSMUSG00000039294.15	novel	2239	7	NA	NA	4176	1	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACTGGCTGCAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	121115062	121114933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr11_-_121114900_121115100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005525	chr11	-	369	3	ISM	ENSMUSG00000039294.15	ENST00000434650.6	525	5	2509	0	2509	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTGGCTGCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	121116729	121114934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_121115059_121115374_121115520_121116629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005526	chr11	-	231	3	ISM	ENSMUSG00000039294.15	ENST00000434650.6	525	5	1563	532	1563	-532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTTTGGGAAGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	121117675	121115466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_121115520_121116629_121116727_121117594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005527	chr11	-	225	3	ISM	ENSMUSG00000039294.15	ENST00000434650.6	525	5	1	1725	1	-1725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTTCTCAGAGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	121119237	121116659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_121116727_121117594_121117669_121119153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005528	chr11	-	258	2	ISM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	55	5841	51	-4320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGGTTCCAAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	121120080	121119254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_121119297_121119864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005529	chr11	+	1059	2	ISM	ENSMUSG00000000056.8	ENST00000390006.8	1354	10	12339	-657	12339	657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATAGTCCTTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	121141583	121144405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121141744_121143506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005530	chr11	+	978	1	ISM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	17626	0	16460	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTGTATGTGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	121145704	121146682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_+_121145700_121146700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005531	chr11	-	1209	1	Genic_Genomic	ENSMUSG00000025173.14	novel	NA	NA	NA	NA	25961	2	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGCCATATGTAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	121219256	121218047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr11_-_121218000_121219300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005532	chr11	-	1503	4	ISM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	24209	52	24155	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTTTCTTTGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	121221062	121218101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005533	chr11	-	964	1	ISM	ENSMUSG00000025170.14	ENSMUST00000106107.3	1861	6	31163	0	31106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTCGTGGTATCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	121247914	121246950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr11_-_121247000_121247900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005534	chr11	-	1251	3	FSM	ENSMUSG00000039238.7	ENST00000572562.1	1252	3	3	-2	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCAAGTGCACTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121410138	121402634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_-_121403326_121403452_121403930_121410055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005535	chr11	+	1402	4	FSM	ENSMUSG00000039208.16	ENSMUST00000036742.14	1401	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTTTTTACAAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	121593235	121607132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr11_+_121593622_121598555_121598942_121605522_121605583_121606562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005536	chr12	+	943	2	ISM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	2109	2487	1698	-311	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAACCACTTTAGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	3287612	3288923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_3287661_3288028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005537	chr12	-	588	1	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	61954	0	61954	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTTTGGTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3298015	3297427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_3297400_3298000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005538	chr12	-	864	4	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	52963	1911	52963	-1911	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACACTCATTTTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	3307006	3299338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005539	chr12	-	744	3	ISM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	134	9439	134	-9439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACATAGCAGGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	3359835	3306866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_3307006_3314688_3314750_3359291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005540	chr12	+	1456	2	ISM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	15033	-1096	15017	1096	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAAGTGACCCGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	3956760	3958938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_3956884_3957605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005541	chr12	+	1374	1	ISM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	103044	0	17726	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCCTGGGGTTAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	3959469	3960843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_3959500_3960800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005542	chr12	+	1585	2	ISM	ENSMUSG00000020657.17	ENSMUST00000049584.6	2934	9	20422	982	20422	-982	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGACTCCTGTCATCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4153050	4158222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4153215_4156801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005543	chr12	+	1583	1	ISM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	26441	0	26395	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTCTGCTGGCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	4159023	4160606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4159000_4160600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005544	chr12	+	522	2	ISM	ENSMUSG00000020654.16	ENST00000679454.1	4553	22	18	79040	18	-79039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACCTTCGTGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	4183536	4184485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4183720_4184146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005545	chr12	+	650	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	479	19077	479	-19077	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGGCGGGGAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	4184631	4244447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4185001_4223454_4223605_4244316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005546	chr12	+	382	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	60731	16601	60731	-16601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTCCTTCCAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	4244883	4246923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4244978_4245131_4245260_4246763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005547	chr12	+	396	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	61010	15090	61010	-15090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAAACAGCCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4245162	4248434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4245260_4246763_4246923_4248294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005548	chr12	+	468	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	62611	14086	62611	-14086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTCTGGCAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	4246763	4249438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4246923_4248294_4248470_4249304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005549	chr12	+	487	4	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	64141	12304	64141	-12304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGACCCAGAGATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	4248293	4251220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4248470_4249304_4249434_4250901_4251045_4251181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005550	chr12	+	627	4	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	67029	6900	67029	-6900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATGAAGCCTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	4251181	4256624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4251344_4253513_4253602_4254721_4254839_4256364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005551	chr12	+	405	4	ISM	ENSMUSG00000020654.16	ENST00000679454.1	4553	22	73009	4061	72375	-4060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGGATGTCATGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4256527	4259464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4256625_4256912_4256979_4258579_4258662_4259304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005552	chr12	+	391	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	74424	3184	74424	-3184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCTCCTGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	4258576	4260340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4258662_4259304_4259464_4260193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005553	chr12	+	400	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	75179	2632	75179	-2632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCCAGTAACTAGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	4259331	4260892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4259464_4260193_4260341_4260771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005554	chr12	+	375	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	76057	1919	76057	-1919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGGCACCACTAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	4260209	4261605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4260341_4260771_4260892_4261481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005555	chr12	+	371	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	76619	1319	76619	-1319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCAGTACTAGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	4260771	4262205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4260892_4261481_4261606_4262078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005556	chr12	+	602	3	ISM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	77327	569	77327	-569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGAGGGTGGCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	4261479	4262955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4261606_4262078_4262204_4262604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005557	chr12	-	976	1	ISM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	21652	0	21323	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTTGCTTTTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	4262642	4261666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_4261700_4262600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005558	chr12	+	371	1	ISM	ENSMUSG00000020654.16	ENSMUST00000124505.8	4962	22	80051	0	79002	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	4263154	4263525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4263200_4263500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005559	chr12	+	1675	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	22	2143	22	-2143	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTCCTCCATCGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	4284048	4287807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_4284279_4286362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005560	chr12	+	1446	1	FSM	ENSMUSG00000112829.2	ENSMUST00000219209.2	872	1	794	-1368	794	1368	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATTACCTAAAATAGATA	NA	NA	NA	NA	NA	NA	NA	NA	4288505	4289951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_4288500_4290000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005561	chr12	-	812	1	ISM	ENSMUSG00000020647.11	ENST00000395856.3	6735	20	106346	0	96346	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCTATGGAGGGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	4298154	4297342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_4297300_4298200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005562	chr12	-	823	2	ISM	ENSMUSG00000020647.11	ENSMUST00000220434.2	4756	19	48950	41630	48950	-41630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTGGGACAACACGT	NA	NA	NA	NA	NA	NA	NA	NA	4345550	4340812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_4340995_4344909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005563	chr12	-	3120	1	FSM	ENSMUSG00000118449.2	ENSMUST00000238375.2	3233	1	115	-2	115	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCACTCCCCTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4642914	4639794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_4639800_4642900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005564	chr12	+	293	2	ISM	ENSMUSG00000020640.11	ENSMUST00000219007.2	4977	38	93781	5452	93781	-5452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGCCAACCACGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4757055	4757745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_4757133_4757529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005565	chr12	+	1180	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTTCTCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	4867543	4877659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005566	chr12	-	592	1	ISM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	7826	0	7670	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTGTGGGAGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4883765	4883173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_4883200_4883800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005567	chr12	-	910	5	FSM	ENSMUSG00000020635.9	ENST00000452109.1	927	5	18	-1	18	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTCTTCCTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4891484	4883192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_4883796_4884738_4884852_4887439_4887496_4888164_4888217_4891398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005568	chr12	-	680	1	ISM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	27994	0	27553	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGTGGTTGTACATG	NA	NA	NA	NA	NA	NA	NA	NA	4929711	4929031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_4929000_4929700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005569	chr12	-	798	2	ISM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	23281	786	23281	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTTCAGTTTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	4933983	4930134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_4930772_4933822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005570	chr12	+	1010	2	Genic_Genomic	ENSMUSG00000073233.5	novel	1008	1	NA	NA	-90	19	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGACACCCAACACAATA	NA	NA	NA	NA	NA	NA	NA	NA	7909809	7910926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_7910084_7910190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005571	chr12	+	1452	1	FSM	ENSMUSG00000073233.5	ENSMUST00000101625.5	1008	1	336	-780	336	780	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTAGAGGTAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	7910235	7911687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_7910200_7911700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005572	chr12	+	1358	4	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	30347	982	30307	-982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTGTGATTCAGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	8288453	8334777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8288616_8318363_8318599_8325807_8325891_8333899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005573	chr12	+	1276	1	Genic_Genomic	ENSMUSG00000037669.16	novel	NA	NA	NA	NA	76338	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGTGGTCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	8334484	8335760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_8334500_8335800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005574	chr12	+	2534	6	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	4442	270	4442	-270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGGGTGTGTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	8367873	8393554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005575	chr12	+	1752	1	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	28641	0	28641	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTGTTGTTCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	8392072	8393824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8392100_8393800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005576	chr12	-	1048	1	FSM	ENSMUSG00000054364.6	ENSMUST00000067384.6	2349	1	1301	0	1301	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGGCTTAATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	8548708	8547660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_8547700_8548700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005577	chr12	+	394	2	ISM	ENSMUSG00000020594.15	ENST00000338086.9	6069	20	12104	38957	12104	-36381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAGCAGGTAAAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	8760192	8763620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8760326_8763359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005578	chr12	+	365	2	ISM	ENSMUSG00000020594.15	ENST00000338086.9	6069	20	15271	38640	15271	-36064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTTTTCAATTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	8763359	8763937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8763631_8763843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005579	chr12	+	403	3	ISM	ENSMUSG00000020594.15	ENST00000338086.9	6069	20	23593	23800	23593	-21224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATGACTGACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	8771681	8778777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8771808_8774046_8774180_8778633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005580	chr12	+	393	2	ISM	ENSMUSG00000020594.15	ENST00000338086.9	6069	20	30828	19145	30828	-16569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAACTCCAGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	8778916	8783432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8779150_8783272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005581	chr12	+	396	2	ISM	ENSMUSG00000020594.15	ENST00000338086.9	6069	20	35214	8628	35214	-6052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCGCTTCCCCAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	8783302	8793949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8783510_8793760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005582	chr12	+	396	2	ISM	ENSMUSG00000020594.15	ENST00000338086.9	6069	20	50672	2786	50672	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGAATCTTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	8798760	8799791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8798954_8799588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005583	chr12	+	376	1	ISM	ENSMUSG00000020594.15	ENSMUST00000178015.8	5874	20	78068	4	54113	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAGAGTGCCTGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	8802201	8802577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8802200_8802600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005584	chr12	+	799	3	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	-73	2323	17	-2323	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCACCTGGTCAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	8821339	8840739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8821702_8839406_8839489_8840384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005585	chr12	+	806	3	ISM	ENSMUSG00000020592.15	ENSMUST00000171158.8	2311	6	19105	1104	19105	-1104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTGTGCTGGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	8840517	8841958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8840867_8841290_8841427_8841637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005586	chr12	+	371	1	Genic_Genomic	ENSMUSG00000020592.15	novel	NA	NA	NA	NA	21933	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTACTTGTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	8843345	8843716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_8843300_8843700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005587	chr12	+	1062	6	ISM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	10044	0	10044	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCATGTTTATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	8981707	8988742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005588	chr12	+	446	2	ISM	ENSMUSG00000020583.5	ENSMUST00000020899.5	3014	8	230	19678	230	-19678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGACAGATGGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	8998158	9002350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_8998252_9001997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005589	chr12	+	174	2	ISM	ENSMUSG00000066643.13	ENST00000281405.9	4037	28	6937	45903	6937	-45903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACACATTTATGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	9031085	9032859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_9031161_9032760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005590	chr12	+	170	2	ISM	ENSMUSG00000066643.13	ENST00000281405.9	4037	28	13156	38787	13156	-38787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGGACACAAAAAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	9037304	9039975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_9037404_9039904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005591	chr12	+	165	2	ISM	ENSMUSG00000066643.13	ENST00000281405.9	4037	28	21917	24665	21917	-24665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTAATCAGATCACACG	NA	NA	NA	NA	NA	NA	NA	NA	9046065	9054097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_9046130_9053996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005592	chr12	+	196	2	ISM	ENSMUSG00000066643.13	ENST00000281405.9	4037	28	38535	12655	38535	-12655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGCTAAAGAACCCCGACA	NA	NA	NA	NA	NA	NA	NA	NA	9062683	9066107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_9062742_9065969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005593	chr12	+	173	2	ISM	ENSMUSG00000066643.13	ENST00000281405.9	4037	28	41819	12292	41819	-12292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGTACACCGCACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	9065967	9066470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_9066107_9066436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005594	chr12	+	164	2	ISM	ENSMUSG00000066643.13	ENST00000281405.9	4037	28	48620	4520	48620	-4520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTACGTGCTGTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	9072768	9074242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_9072884_9074193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005595	chr12	+	787	2	ISM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	4956	-18	4925	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGACAAAGCTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	9084952	9086412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_9085089_9085761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005596	chr12	+	1482	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGCATTTCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10440771	10445564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_10441227_10444537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005597	chr12	+	1282	2	NNC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	10440966	10445562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_10441227_10444540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005598	chr12	+	905	2	NNC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	226	-283	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAAGACACTGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	10441065	10445279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_10441229_10444537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005599	chr12	+	874	3	FSM	ENSMUSG00000020621.7	ENST00000381249.4	1231	3	360	-3	360	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGAAGGTGTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	10441199	10494984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_10441227_10444537_10445340_10494939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005600	chr12	+	260	1	FSM	ENSMUSG00000112298.2	ENSMUST00000220362.2	482	1	358	-136	358	136	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGACAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	11149954	11150214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_11150000_11150200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005601	chr12	+	2387	3	ISM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	16948	173	16948	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTTATAATTCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	11333077	11337482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_11333174_11335098_11335219_11335311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005602	chr12	+	2181	1	ISM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	19345	0	19345	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATGTCATTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	11335474	11337655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_11335500_11337700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005603	chr12	+	1857	3	ISM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	48785	346	48542	-346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACCAGTGCATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	11364671	11369440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_11364761_11366619_11366718_11367770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005604	chr12	+	1686	1	Genic_Genomic	ENSMUSG00000020608.8	novel	NA	NA	NA	NA	51975	4	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATGCTTTTGTGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	11368104	11369790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_11368100_11369800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005605	chr12	+	693	1	FSM	ENSMUSG00000078377.6	ENSMUST00000105169.6	614	1	-13	-66	-13	66	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTAAGAACATCCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	12073032	12073725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_12073000_12073700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005606	chr12	+	310	1	FSM	ENSMUSG00000066629.3	ENSMUST00000085720.3	315	1	55	-50	55	50	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCAATGGACAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	12962077	12962387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_12962100_12962400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005607	chr12	-	1415	1	ISM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	4402	5	3104	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGCGATGTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	12987513	12986098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_12986100_12987500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005608	chr12	-	1564	2	FSM	ENSMUSG00000037169.16	ENST00000638417.1	1702	2	3	135	3	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGGTGCATAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	12991822	12986233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_12987612_12991636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005609	chr12	-	932	1	ISM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	31309	0	31233	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTGTGTGTTTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	13267905	13266973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_13267000_13267900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005610	chr12	-	1113	3	ISM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	28303	-573	28303	573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCCAGCAAAATCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	13270835	13268734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_13269630_13270347_13270469_13270738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005611	chr12	-	215	1	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAGCTGGGCAAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	13486254	13486039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr12_-_13486000_13486300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005612	chr12	+	781	3	ISM	ENSMUSG00000020591.12	ENST00000306928.6	1325	4	273	1524	212	-1287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCGTGGCTCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	16703712	16708460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_16704125_16706597_16706872_16708365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005613	chr12	+	625	3	ISM	ENSMUSG00000020591.12	ENST00000306928.6	1325	4	3173	0	3112	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCTTGGGACACACCC	NA	NA	NA	NA	NA	NA	NA	NA	16706612	16709984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_16706872_16708365_16708461_16709713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005614	chr12	+	271	1	ISM	ENSMUSG00000020591.12	ENST00000306928.6	1325	4	6274	0	6213	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCTTGGGACACACCC	NA	NA	NA	NA	NA	NA	NA	NA	16709713	16709984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_16709700_16710000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005615	chr12	+	379	4	ISM	ENSMUSG00000057469.9	ENST00000428850.2	497	5	3	1823	3	-1823	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTTCCATCAGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	16861290	16870386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_16861317_16866400_16866456_16868917_16869059_16870229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005616	chr12	-	261	2	Antisense	novelGene_ENSMUSG00000057469.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTCAGATCCTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	16872209	16870243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_-_16870391_16872095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005617	chr12	+	572	1	ISM	ENSMUSG00000057469.9	ENSMUST00000020908.9	2418	7	15204	0	14894	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16876181	16876753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_16876200_16876800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005618	chr12	-	1079	1	ISM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	10392	0	10229	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAAGCTGTCATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	17039727	17038648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_17038600_17039700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005619	chr12	-	193	2	ISM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	7748	1047	7636	31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCCATTGCTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	17042320	17039745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_17039897_17042278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005620	chr12	-	161	2	ISM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	6547	3630	6384	-2502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAAACCTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	17043572	17042278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_17042321_17043453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005621	chr12	-	244	3	ISM	ENSMUSG00000045679.15	ENST00000441908.6	595	6	2253	3681	2253	-3681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTAAGATAACCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	17047703	17043457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_17043575_17045614_17045673_17047634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005622	chr12	-	327	3	ISM	ENSMUSG00000045679.15	ENST00000441908.6	595	6	-31	7858	-31	-7858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTCCTGCATATGAG	NA	NA	NA	NA	NA	NA	NA	NA	17049987	17047634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_17047705_17047774_17047858_17049813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005623	chr12	+	429	4	ISM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	8	10257	8	-10257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTCTTCCCTACTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	17316553	17324514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005624	chr12	+	436	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	3800	7465	3800	-7465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTGTTATTTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	17320395	17327306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17320539_17323945_17324004_17324384_17324512_17327198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005625	chr12	+	424	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	7349	6126	7349	-6126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGCCTTCAGCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	17323944	17328645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17324004_17324384_17324512_17327198_17327306_17328514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005626	chr12	+	425	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	7844	5820	7844	-5820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGTCTACAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	17324439	17328951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17324512_17327198_17327306_17328514_17328646_17328836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005627	chr12	+	479	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	10622	5047	10622	-5047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTTACCCCAGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	17327217	17329724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17327306_17328514_17328646_17328836_17328952_17329579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005628	chr12	+	581	5	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	12241	3693	12241	-3693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTAGTTGTTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	17328836	17331078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005629	chr12	+	416	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	13781	1474	13781	-1474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGATCAAGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	17330376	17333297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17330464_17330567_17330641_17330911_17331071_17333200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005630	chr12	+	1142	4	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	13992	0	13992	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGTGATTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	17330587	17334771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17330641_17330911_17331071_17333200_17333298_17333938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005631	chr12	+	334	2	NNC	ENSMUSG00000020571.14	novel	2175	13	NA	NA	16597	-599	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTGTAGCAGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	17333192	17334172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_17333293_17333938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005632	chr12	+	839	1	Genic_Genomic	ENSMUSG00000020571.14	novel	NA	NA	NA	NA	17341	4	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGATTATCTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	17333936	17334775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_17333900_17334800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005633	chr12	+	791	1	ISM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	80847	0	80751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	17479305	17480096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17479300_17480100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005634	chr12	+	639	5	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	260	3001	260	-3001	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGATGAAAGTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	17595054	17598084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005635	chr12	+	803	3	ISM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	4877	0	4877	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGGAATGTTTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	17599671	17601085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17599782_17599863_17600079_17600607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005636	chr12	+	632	2	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	5089	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCATTGTGAAAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	17599883	17601047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_17600076_17600607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005637	chr12	+	444	2	ISM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	-2	5536	-2	-5536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGCACCATCGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	17740854	17836398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17741048_17836147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005638	chr12	+	648	3	ISM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	95427	551	95427	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTTCCAATGGTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	17836283	17841383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17836550_17837545_17837652_17841107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005639	chr12	+	278	2	NNC	ENSMUSG00000071379.3	novel	1526	4	NA	NA	95500	-4298	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAACAATGATGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	17836356	17837636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_17836544_17837545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005640	chr12	+	300	1	ISM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	100778	0	100778	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGAGTTTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	17841634	17841934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_17841600_17841900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005641	chr12	+	1408	2	FSM	ENSMUSG00000113536.2	ENSMUST00000221062.2	1403	2	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTCTGTGAGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	17984687	17989630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_17985255_17988789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005642	chr12	+	817	1	Genic_Genomic	ENSMUSG00000113536.2	novel	NA	NA	NA	NA	4122	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTCTGTGAGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	17988813	17989630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_17988800_17989600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005643	chr12	+	298	1	ISM	ENSMUSG00000113642.2	ENSMUST00000221149.2	550	2	161433	0	76	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGATTGCTTGCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	18112167	18112465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_18112200_18112500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005644	chr12	+	2524	4	FSM	ENSMUSG00000073197.10	ENSMUST00000177778.9	2542	4	18	0	-18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTATTTTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	18564528	18585255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_18564937_18581610_18581738_18581935_18581997_18583327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005645	chr12	+	565	1	ISM	ENSMUSG00000073197.10	ENSMUST00000177778.9	2542	4	20177	3	20141	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCCTTGTATTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	18584687	18585252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_18584700_18585300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005646	chr12	-	1441	1	Genic_Genomic	ENSMUSG00000085642.9	novel	NA	NA	NA	NA	-8	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTTTCATTTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	20927080	20925639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_20925600_20927100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005647	chr12	-	2177	1	ISM	ENSMUSG00000069755.6	ENSMUST00000079237.7	2488	2	1909	0	1909	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACAACTCACACTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	20950751	20948574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_20948600_20950800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005648	chr12	-	2201	2	FSM	ENSMUSG00000069755.6	ENSMUST00000079237.7	2488	2	62	225	62	-225	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATTTAATGTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	20952598	20948799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_20950936_20952533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005649	chr12	-	360	1	ISM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	15837	282	15650	5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTGCATTAAGACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	21320448	21320088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_21320100_21320400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005650	chr12	-	519	3	ISM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	13947	591	13947	-591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGACAGATGGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21322151	21320684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_21320959_21321419_21321570_21322056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005651	chr12	+	323	3	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	-15	16388	-15	-16388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTCCCTTTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	21336384	21341849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21336546_21340248_21340313_21341751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005652	chr12	+	272	3	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	3868	14882	3868	-14882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCACTTCACTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	21340267	21343355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21340313_21341751_21341850_21343226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005653	chr12	+	301	3	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	5420	13065	5420	-13065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCATGTTTATGATAGA	NA	NA	NA	NA	NA	NA	NA	NA	21341819	21345172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21341850_21343226_21343356_21345030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005654	chr12	+	273	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	8627	11499	8627	-11499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATTAACGGACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	21345026	21346738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21345209_21346647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005655	chr12	+	244	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	10245	10297	10245	-10297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTGGGTGCCTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	21346644	21347940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21346738_21347789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005656	chr12	+	298	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	11419	8019	11419	-8019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCGCTCTTGGAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	21347818	21350218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21347941_21350042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005657	chr12	+	318	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	13660	6662	13660	-6662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTACCATCCTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	21350059	21351575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21350219_21351416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005658	chr12	+	312	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	15015	5727	15015	-5727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGGAATGGCATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	21351414	21352510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21351576_21352359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005659	chr12	+	226	2	NNC	ENSMUSG00000054309.10	novel	1858	13	NA	NA	15083	-5749	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCCACCTCACGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	21351482	21352488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_21351580_21352359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005660	chr12	+	306	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	15957	2778	15957	-2778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCAGCAGGTGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	21352356	21355459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21352507_21355303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005661	chr12	+	263	2	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	18944	8175	18903	-1355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACACTATTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	21355302	21356882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21355457_21356773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005662	chr12	+	213	2	ISM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	20372	142	20372	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGACTGAAATTTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	21356771	21358095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21356883_21357993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005663	chr12	+	194	2	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	21635	6058	21594	762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCCAAGCCACCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21357993	21358999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21358093_21358904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005664	chr12	+	203	3	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	22597	2688	22556	-2688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAAGGAGCCGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	21358955	21362369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21359000_21360197_21360286_21362298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005665	chr12	+	227	3	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	23860	1200	23819	-1200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCGGGTACGTAGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	21360218	21363857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21360286_21362298_21362369_21363767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005666	chr12	+	359	3	ISM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	25938	219	25897	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGCCTGTTTACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	21362296	21364838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_21362369_21363767_21363865_21364648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005667	chr12	+	220	1	Genic_Genomic	ENSMUSG00000054309.10	novel	NA	NA	NA	NA	28441	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCCACAGCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	21364840	21365060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_21364800_21365100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005668	chr12	-	1815	1	ISM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	48264	6	48210	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGATACGAGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	21375330	21373515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_21373500_21375300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005669	chr12	-	1829	3	ISM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	45459	430	45405	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTTGTATTTTAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	21378135	21373939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_21375628_21376119_21376171_21378045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005670	chr12	-	411	1	Genic_Genomic	ENSMUSG00000076432.14	novel	NA	NA	NA	NA	26956	1	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGCTGGTATTAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	21440481	21440070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_21440100_21440500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005671	chr12	-	2082	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	21467409	21440329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005672	chr12	-	470	2	ISM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	-50	26465	-1	-26465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGGCGCCGGCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	21467639	21466797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_21467133_21467504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005673	chr12	-	467	1	Genic_Genomic	ENSMUSG00000114139.2	novel	NA	NA	NA	NA	3169	7	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	22880193	22879726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_22879700_22880200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005674	chr12	-	1396	3	FSM	ENSMUSG00000113670.2	ENSMUST00000222206.2	1400	3	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGAGTTTCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	23010303	23003995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_23004839_23008352_23008459_23009856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005675	chr12	-	751	1	Genic_Genomic	ENSMUSG00000073158.5	novel	NA	NA	NA	NA	53295	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTGTCTGTGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	24093952	24093201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_24093200_24094000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005676	chr12	+	404	3	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	16424	35338	16172	13453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTATATTCTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24564781	24573200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_24564935_24566857_24567009_24573100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005677	chr12	+	438	4	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	18515	11473	18263	-11473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTTCTGACGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24566872	24597065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_24567009_24573100_24573201_24594269_24594418_24597011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005678	chr12	+	591	2	ISM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	58160	9	57908	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTAAATGACACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	24606517	24608529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_24606741_24608161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005679	chr12	+	379	1	NIC	ENSMUSG00000059669.9	novel	2209	15	NA	NA	59550	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGGAAACTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	24608159	24608538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_24608200_24608500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005680	chr12	+	1655	6	ISM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	2110	0	2110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTTGGGTAAAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	24760349	24764145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005681	chr12	+	1086	3	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	4418	-199	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTGATCTAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	24762657	24763946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_24762765_24762862_24762974_24763078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005682	chr12	+	1073	1	Genic_Genomic	ENSMUSG00000020649.12	novel	NA	NA	NA	NA	4836	3	mono-exon	FALSE	NA	NA	NA	NA	NA	893	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGGTAAAATGTACATC	NA	NA	NA	NA	NA	NA	NA	NA	24763075	24764148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_24763100_24764100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005683	chr12	+	677	3	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	26143	46703	26143	-46703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATCAAGCCCTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	25058400	25061138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_25058692_25060070_25060212_25060893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005684	chr12	+	462	3	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	28636	44417	28636	-44417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTCGGTGACAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	25060893	25063424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_25061138_25061498_25061588_25063295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005685	chr12	+	464	3	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	54208	17316	54208	-17316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTAAAAACGAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	25086465	25090525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_25086632_25088322_25088550_25090454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005686	chr12	+	624	2	ISM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	71538	875	71538	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAATCCGACCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	25103795	25106966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_25104034_25106580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005687	chr12	+	437	1	ISM	ENSMUSG00000036333.12	ENSMUST00000066652.7	7409	32	82486	1850	75152	5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTGAAGTAGCGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25107409	25107846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_25107400_25107800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005688	chr12	-	621	1	ISM	ENSMUSG00000020644.10	ENSMUST00000221761.2	1969	4	2721	0	1668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGATTCTGAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25144418	25143797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_25143800_25144400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005689	chr12	-	1427	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	-155	-2	-155	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGGGATTCTGAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25146246	25143797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_25144576_25145309_25145374_25145661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005690	chr12	-	1091	2	ISM	ENSMUSG00000020644.10	ENSMUST00000221761.2	1969	4	12	1888	12	-557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCAGCATCCTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25147127	25145685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_25146253_25146603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005691	chr12	-	578	2	FSM	ENSMUSG00000094002.4	ENST00000431182.2	577	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTCAGAGACTCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	27188955	27185221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_27185262_27188417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005692	chr12	-	573	2	NNC	ENSMUSG00000094002.4	novel	577	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTCAGAGACTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	27188955	27185222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_27185258_27188417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005693	chr12	-	768	5	ISM	ENSMUSG00000036655.9	ENST00000382062.6	776	6	1	466	1	-3	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCCGACAGGGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	28667561	28644658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_28645048_28645242_28645339_28645958_28646013_28662861_28662934_28667404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005694	chr12	-	978	6	FSM	ENSMUSG00000061477.5	ENSMUST00000221871.2	820	6	77	-235	77	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCCTATTCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	28685779	28680847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005695	chr12	-	781	5	NNC	ENSMUSG00000061477.5	novel	820	6	NA	NA	361	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTCCTATTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28685495	28680850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_28681193_28681622_28681774_28683766_28683830_28684207_28684352_28685414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005696	chr12	+	1651	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	28725230	28732174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005697	chr12	-	742	1	ISM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	59103	0	59008	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	28741368	28740626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_28740600_28741400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005698	chr12	-	762	2	ISM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	58608	254	58532	-254	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCAAGAGAATTGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	28741844	28740881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_28741557_28741757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005699	chr12	+	541	4	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	87520	2256	87520	-2256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGACACCGCTTCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	28897585	28914834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_28897656_28909250_28909388_28912953_28913122_28914668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005700	chr12	+	2911	3	ISM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	102886	-2405	102886	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTCCATGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	28912951	28919495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_28913122_28914668_28914834_28916919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005701	chr12	+	2582	1	Genic_Genomic	ENSMUSG00000036613.9	novel	NA	NA	NA	NA	107224	7	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGTCTAGCCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	28917289	28919871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_28917300_28919900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005702	chr12	+	166	2	ISM	ENSMUSG00000061911.16	ENST00000649587.1	498	3	1	5464	1	-5464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGCCTGCCTTTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	29833620	29834312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29833675_29834200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005703	chr12	+	320	2	ISM	ENSMUSG00000061911.16	ENST00000649587.1	498	3	579	125	579	-125	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGGGGGAAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29834198	29839651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29834313_29839445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005704	chr12	+	1448	3	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	8762	94184	579	-29965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATTTCTACCTAACGT	NA	NA	NA	NA	NA	NA	NA	NA	29834198	29877836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29834313_29861371_29861734_29876864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005705	chr12	+	1307	3	ISM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	8762	95462	579	-30103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGATGGCCATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	29834198	29877698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29834313_29861371_29861734_29876867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005706	chr12	+	228	1	ISM	ENSMUSG00000061911.16	ENST00000649587.1	498	3	5929	0	5929	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATTTTTTCCCAACCAC	NA	NA	NA	NA	NA	NA	NA	NA	29839548	29839776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29839500_29839800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005707	chr12	+	1329	5	ISM	ENSMUSG00000061911.16	ENST00000649663.1	6548	19	51531	80472	-13241	-15282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGTTACGACAACCATA	NA	NA	NA	NA	NA	NA	NA	NA	29876967	29892519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29877837_29882286_29882422_29886348_29886440_29888038_29888147_29892393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005708	chr12	+	862	2	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	51667	89599	-13105	-25380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCGTGTCTCGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	29877103	29882421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29877831_29882286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005709	chr12	+	861	5	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	62600	67741	-2172	-3522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGGAGGTGACCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	29888036	29904279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005710	chr12	+	3238	5	ISM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	119802	-2	55030	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACTCTGAATAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	29945238	29973162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005711	chr12	+	849	2	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	138795	1389	74023	93	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGACTAGTTTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	29964231	29970631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29964343_29969893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005712	chr12	+	1402	2	ISM	ENSMUSG00000061911.16	ENST00000648665.1	4547	20	144453	-301	79681	301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTATATATATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	29969889	29972321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_29970038_29971067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005713	chr12	+	2868	1	NIC	ENSMUSG00000061911.16	novel	7202	25	NA	NA	80129	1	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTCTAATGGGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29970337	29973205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_29970300_29973200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005714	chr12	-	216	1	NIC	ENSMUSG00000020673.15	novel	3299	17	NA	NA	26801	4	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCCTCTTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	30142755	30142539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_30142500_30142800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005715	chr12	-	441	2	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	24547	0	24547	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCCAAGCCTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30145009	30142543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_30142753_30144777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005716	chr12	-	305	2	NNC	ENSMUSG00000020673.15	novel	1501	8	NA	NA	24607	-80	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCCCCCAAGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30144949	30142623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_30142753_30144773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005717	chr12	-	404	2	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	21215	2242	21215	-2242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACAGGTCAGTACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	30148341	30144785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_30145016_30148167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005718	chr12	-	412	2	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	18998	5624	18998	-5624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCGGGTCTAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	30150558	30148167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_30148339_30150317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005719	chr12	-	441	2	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	15441	7805	15441	-7805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCAGACCCTGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	30154115	30150348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_30150577_30153902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005720	chr12	-	474	3	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	2608	11359	2608	-11359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTCCCTCAAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30166948	30153902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_30154110_30155905_30156036_30166811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005721	chr12	+	190	2	Antisense	novelGene_ENSMUSG00000020673.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGAAACAAATGAAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	30154046	30156037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_30154114_30155914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005722	chr12	-	382	3	ISM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	-3	13400	-3	10673	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTAATTTCTTATACCAC	NA	NA	NA	NA	NA	NA	NA	NA	30169559	30155943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_30156036_30166811_30166945_30169402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005723	chr12	+	2814	4	ISM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	1068	-4	1068	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGTGCTTTCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30635492	30641218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30635590_30637198_30637254_30638472_30638567_30638650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005724	chr12	+	167	2	ISM	ENSMUSG00000054204.7	ENST00000401503.5	588	4	133	3516	133	-3516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTGGCCACACAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30937175	30940114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30937260_30940031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005725	chr12	+	172	2	ISM	ENSMUSG00000054204.7	ENST00000401503.5	588	4	2985	283	2985	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAGATTTATTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	30940027	30943347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30940116_30943263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005726	chr12	-	2308	1	Genic_Genomic	ENSMUSG00000044573.17	novel	NA	NA	NA	NA	9511	1	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTCTGTTGGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	30945631	30943323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_30943300_30945600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005727	chr12	+	115	1	ISM	ENSMUSG00000054204.7	ENSMUST00000067087.7	1509	5	9195	223	6473	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTACAATTAAAATCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	30943515	30943630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30943500_30943600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005728	chr12	-	2567	4	ISM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	6588	343	160	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTCCAAACTATACTTT	NA	NA	NA	NA	NA	NA	NA	NA	30954982	30943667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005729	chr12	-	256	2	FSM	ENSMUSG00000044573.17	ENST00000405233.5	257	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACCACCCTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30955141	30954665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_30954831_30955050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005730	chr12	-	169	1	NIC	ENSMUSG00000044573.17	novel	2754	6	NA	NA	308	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACCACCCTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30954834	30954665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_30954700_30954800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005731	chr12	+	161	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	29	35215	29	-35215	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGGATTGTCCTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	30972262	30974841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30972345_30974762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005732	chr12	+	183	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	2528	33180	2528	-33180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGCTGTCTACACCGTT	NA	NA	NA	NA	NA	NA	NA	NA	30974761	30976876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30974877_30976808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005733	chr12	+	151	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	4574	20399	4574	-20399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCGCAGTTGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	30976807	30989657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30976874_30989572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005734	chr12	+	207	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	17342	19670	17342	-19670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTGATTGAGAGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	30989575	30990386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30989686_30990289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005735	chr12	+	197	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	18088	17991	18088	-17991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATATGAAACTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	30990321	30992065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30990419_30991965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005736	chr12	+	184	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	19798	17186	19798	-17186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTTGCAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	30992031	30992870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30992134_30992788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005737	chr12	+	177	2	ISM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	20555	160	20555	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATATCAAAGACCGACT	NA	NA	NA	NA	NA	NA	NA	NA	30992788	31009896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_30992872_31009802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005738	chr12	+	107	1	ISM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	48283	105	37716	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTACTGCAAACGTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	31009949	31010056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_31009900_31010100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005739	chr12	-	319	1	ISM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	19858	0	19744	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACAATTTATATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	31381594	31381275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31381300_31381600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005740	chr12	-	890	4	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	17283	-1	17283	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACTAGAACAAGATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	31384055	31381769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005741	chr12	-	438	3	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	16556	1714	16556	-1714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAAGATTCTTGGACATA	NA	NA	NA	NA	NA	NA	NA	NA	31384782	31383484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31383562_31383865_31384056_31384611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005742	chr12	-	408	3	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	15682	2240	15682	-2240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAGAAGATGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	31385656	31384010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31384056_31384611_31384783_31385464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005743	chr12	-	440	3	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	10329	3694	10329	-3694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGATACATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31391009	31385464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31385656_31390278_31390381_31390862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005744	chr12	-	385	4	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	8524	8542	8524	-8542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTGGGGCAGGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	31392814	31390312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31390381_31390862_31391007_31391376_31391478_31392742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005745	chr12	-	302	4	ISM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	1774	11467	1660	-10972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATACCTTTTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	31399678	31392742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31392813_31393373_31393443_31394821_31394902_31399595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005746	chr12	-	2586	1	ISM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	41083	0	37342	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGACCACTGGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	31643551	31640965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31641000_31643600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005747	chr12	-	3046	5	ISM	ENSMUSG00000020650.16	ENST00000465919.5	836	6	4016	-2310	4016	1325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGCCTGAGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31676877	31643818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31646377_31650642_31650744_31667073_31667172_31674113_31674250_31676724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005748	chr12	-	1242	1	NIC	ENSMUSG00000020650.16	novel	6155	8	NA	NA	34510	2	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGGAGAGGGCGCACT	NA	NA	NA	NA	NA	NA	NA	NA	31646383	31645141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_31645100_31646400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005749	chr12	-	1329	2	NNC	ENSMUSG00000020650.16	novel	1939	7	NA	NA	30149	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGAGGAGAGGGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	31650744	31645143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_31646367_31650638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005750	chr12	-	1328	2	NNC	ENSMUSG00000020650.16	novel	1939	7	NA	NA	30160	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGAGGAGAGGGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	31650733	31645143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_31646377_31650638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005751	chr12	-	511	5	ISM	ENSMUSG00000020650.16	ENST00000465919.5	836	6	17	4574	17	-4574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCAGAGAGACTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	31680876	31650702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31650744_31667073_31667172_31674113_31674250_31676724_31676876_31680791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005752	chr12	-	152	2	ISM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	21875	1179	20948	-1179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGGAAGACCTTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	31978659	31977431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31977507_31978582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005753	chr12	-	161	2	ISM	ENSMUSG00000002996.18	ENSMUST00000175686.8	1315	9	15238	594	15238	-594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTACCTCCTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	31984369	31983425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31983501_31984283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005754	chr12	-	110	2	ISM	ENSMUSG00000002996.18	ENSMUST00000176103.8	1319	6	13008	560	12395	-560	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCAGCTGTGATAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	31987212	31987017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31987084_31987168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005755	chr12	-	114	2	ISM	ENSMUSG00000002996.18	ENSMUST00000176103.8	1319	6	6340	3987	5727	-3987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCAGATGTATCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	31993880	31990444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31990506_31993827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005756	chr12	-	119	2	ISM	ENSMUSG00000002996.18	ENSMUST00000176103.8	1319	6	-15	7476	-13	-7476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGAGAGCACCAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	32000235	31993933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_31994012_32000194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005757	chr12	-	1760	3	ISM	ENSMUSG00000020573.18	ENSMUST00000217915.2	3340	11	527	23922	527	-23922	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGTGGTTGCGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32255458	32250498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_32250725_32250833_32250900_32253990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005758	chr12	-	1520	2	ISM	ENSMUSG00000020573.18	ENST00000440650.6	3582	11	0	28162	0	-27972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTCCACATGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	32258669	32254548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_32255998_32258598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005759	chr12	+	1100	2	FSM	ENSMUSG00000112218.2	ENST00000605309.1	1098	2	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGATGCCCTAGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	32760264	32762528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_32760940_32762103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005760	chr12	+	976	5	FSM	ENSMUSG00000020572.9	ENST00000491027.6	975	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGCTTAAGACTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	32870502	32891351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_32870626_32884900_32885030_32888297_32888457_32889149_32889287_32890923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005761	chr12	+	770	3	ISM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	22267	606	22245	-606	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGATTTTTATGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	32892748	32901001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_32892804_32898615_32898751_32900421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005762	chr12	+	485	3	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	26405	2684	26235	-943	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTGTTGGTTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	32896738	32900664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_32896846_32898615_32898751_32900421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005763	chr12	+	573	1	ISM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	30701	1741	30531	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	32901034	32901607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_32901000_32901600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005764	chr12	+	298	2	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	8	11402	8	-11402	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAATTTTTTACTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	33004190	33015501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33004359_33015371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005765	chr12	+	293	2	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	11188	9205	11188	-9205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACACGAACCTCTACCGG	NA	NA	NA	NA	NA	NA	NA	NA	33015370	33017698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33015500_33017534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005766	chr12	+	353	2	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	13375	2609	13375	-2609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCTCCCTGAATGTATC	NA	NA	NA	NA	NA	NA	NA	NA	33017557	33024294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33017743_33024126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005767	chr12	+	358	2	ISM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	19944	1149	19944	-1149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTAGCATGCCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	33024126	33025754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33024319_33025588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005768	chr12	+	203	1	ISM	ENSMUSG00000020570.16	ENSMUST00000076698.13	4999	6	22822	2945	22529	11	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCGTTGTTATATTACA	NA	NA	NA	NA	NA	NA	NA	NA	33026711	33026914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33026700_33026900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005769	chr12	+	187	1	Genic_Genomic	ENSMUSG00000020570.16	novel	NA	NA	NA	NA	25495	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTTAAAAATGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	33029677	33029864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_33029700_33029900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005770	chr12	+	1118	2	ISM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	69999	285	69905	-285	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTAGTAACAGCAAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	33267708	33300860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33267816_33299849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005771	chr12	+	1068	1	Genic_Genomic	ENSMUSG00000020564.18	novel	NA	NA	NA	NA	-52432	4	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTACATTGAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	33300081	33301149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_33300100_33301100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005772	chr12	+	498	2	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	10514	30162	10514	13346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTTCCTGTGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	33375909	33392194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33376133_33391919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005773	chr12	+	610	3	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	26523	26269	26523	17239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCGGCATGGGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	33391918	33396087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33392195_33394888_33394972_33395836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005774	chr12	+	530	3	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	29490	13509	29490	-9425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTCTCCTTTGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	33394885	33408847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33394972_33395836_33396088_33408654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005775	chr12	+	642	3	ISM	ENSMUSG00000020564.18	ENSMUST00000154742.2	3548	9	43257	5061	43257	-977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCACAAGCCATCCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	33408652	33417295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33408848_33412971_33413094_33416970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005776	chr12	+	494	3	ISM	ENSMUSG00000020564.18	ENST00000477775.5	2336	10	53277	-2	52163	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCTGCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	33417558	33422927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_33417914_33420981_33421057_33422863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005777	chr12	+	4329	4	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTGTACAGCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	33479633	33491391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_33479908_33483503_33483646_33486934_33487148_33487691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005778	chr12	+	4324	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTGTACAGCGACAT	NA	NA	NA	NA	NA	NA	NA	NA	33479634	33491391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005779	chr12	-	2061	1	ISM	ENSMUSG00000004698.12	ENSMUST00000239340.2	4110	10	154881	2	63748	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCTTTTCATACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	34423558	34421497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_34421500_34423600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005780	chr12	-	2683	5	ISM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	34512	-1257	34440	90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAAAAAGTCCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	34452866	34422122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005781	chr12	+	1157	3	FSM	ENSMUSG00000036169.7	ENST00000396652.1	1803	3	27	619	-7	-619	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTCCCTAAACCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	36364130	36367748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_36364498_36365600_36365673_36367030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005782	chr12	+	779	1	ISM	ENSMUSG00000036169.7	ENSMUST00000041407.7	1781	2	3454	81	3454	3	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTTGTCCTTGCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	36367591	36368370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_36367600_36368400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005783	chr12	+	645	1	ISM	ENSMUSG00000043153.7	ENSMUST00000062041.6	2690	10	307281	0	306620	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTCTCCTACAACAT	NA	NA	NA	NA	NA	NA	NA	NA	36738798	36739443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_36738800_36739400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005784	chr12	+	212	2	ISM	ENSMUSG00000036095.12	ENSMUST00000221176.2	1439	10	101702	52597	-54	-52597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGCTTCTTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	38031874	38134242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38032010_38134165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005785	chr12	+	155	2	ISM	ENSMUSG00000036095.12	ENSMUST00000221176.2	1439	10	207398	36344	105642	-36344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGCTCTTCTTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38137570	38150495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38137593_38150362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005786	chr12	+	287	2	ISM	ENSMUSG00000036095.12	ENSMUST00000221176.2	1439	10	220198	22167	118442	-22167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTTTTGGTAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	38150370	38164672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38150517_38164531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005787	chr12	+	215	2	NNC	ENSMUSG00000036095.12	novel	1439	10	NA	NA	118515	-22170	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTACGTTTTGGTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	38150443	38164669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_38150521_38164531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005788	chr12	+	198	2	ISM	ENSMUSG00000036095.12	ENSMUST00000221176.2	1439	10	234358	16179	132602	-16179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTTCAAACCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38164530	38170660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38164673_38170604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005789	chr12	+	206	2	ISM	ENSMUSG00000036095.12	ENSMUST00000221176.2	1439	10	243994	9447	142238	-9447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGAGGAGGGAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	38174166	38177392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38174243_38177262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005790	chr12	+	245	2	ISM	ENSMUSG00000036095.12	ENSMUST00000221176.2	1439	10	247089	176	145333	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGCTCTGCCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	38177261	38186663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38177383_38186539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005791	chr12	+	209	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	154611	464675	154611	2655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGGCCACACAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	38186539	38189494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38186658_38189403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005792	chr12	+	205	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	157475	464485	157475	2845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGTACCATGACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	38189403	38189684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38189493_38189568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005793	chr12	+	216	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	157640	456569	157640	10761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCGTCTTTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	38189568	38197600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38189686_38197501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005794	chr12	+	206	3	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	165612	430334	165612	36996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGGTAATGGATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	38197540	38223835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38197601_38216738_38216775_38223725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005795	chr12	+	153	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	202966	414034	202966	53296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGCATGAGAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	38234894	38240135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38234971_38240058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005796	chr12	+	149	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	208128	389796	208128	77534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATTGCATAGGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	38240056	38264373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38240134_38264301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005797	chr12	+	179	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	232372	388060	232372	79270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATGCTGTATAGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	38264300	38266109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38264388_38266017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005798	chr12	+	233	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	234108	376046	234108	91284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATTTACCACTAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	38266036	38278123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38266108_38277961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005799	chr12	+	228	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	246031	274113	246031	193217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCAACCAATGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	38277959	38380056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38278123_38379991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005800	chr12	+	269	2	ISM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	445473	165455	445473	-165455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTTTGCAAGTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	38477401	38488714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38477494_38488537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005801	chr12	+	2289	4	ISM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	456832	667	456660	425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAACCACAAACGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	38488588	38682543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38488734_38652714_38652836_38654101_38654163_38680581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005802	chr12	+	2015	1	ISM	ENSMUSG00000036095.12	ENSMUST00000040500.9	6373	25	750492	1028	649267	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGTGTGGGTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	38681195	38683210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_38681200_38683200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005803	chr12	-	610	1	ISM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	999	2530	999	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTAGTGTTTTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	40086429	40085819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_40085800_40086400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005804	chr12	-	729	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	12	459	12	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCATCGACTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	40088012	40086279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_40086833_40087836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005805	chr12	-	675	4	ISM	ENSMUSG00000001627.13	ENSMUST00000165027.9	1293	11	10395	-230	10395	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTGTGTAGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	40257117	40253130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005806	chr12	-	699	1	Genic_Genomic	ENSMUSG00000055917.16	novel	NA	NA	NA	NA	130032	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTTTACTTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	40365741	40365042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_40365000_40365700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005807	chr12	-	1295	1	ISM	ENSMUSG00000036295.6	ENSMUST00000043884.6	3865	2	33467	2	32989	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCTGATTAGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	41502963	41501668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_41501700_41503000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005808	chr12	-	1662	2	FSM	ENSMUSG00000036295.6	ENST00000308478.10	3430	2	11	1757	11	-1757	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCATTGACAGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	41535941	41503425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_41504671_41535524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005809	chr12	-	1278	2	NNC	ENSMUSG00000036295.6	novel	3430	2	NA	NA	321	-1829	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATACGGAGGGGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	41535631	41503497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_41504671_41535526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005810	chr12	+	611	1	Genic_Genomic	ENSMUSG00000056899.11	novel	NA	NA	NA	NA	883452	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGGGTGTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	42001762	42002373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_42001800_42002400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005811	chr12	-	1537	1	ISM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	3231	0	3231	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACGTGCTTGGAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	44253878	44252341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_44252300_44253900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005812	chr12	-	1920	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	113	428	113	-428	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATTAATCCTATGGATG	NA	NA	NA	NA	NA	NA	NA	NA	44256996	44252769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_44254189_44254869_44255097_44256722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005813	chr12	+	499	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	2	61080	2	-59202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAGATTTGTCAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	44579248	44586422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44579443_44584033_44584140_44586223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005814	chr12	+	360	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	4853	59645	4853	-57767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTCTAAATGCTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	44584099	44587857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44584140_44586223_44586421_44587734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005815	chr12	+	428	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	7040	55824	7040	-53946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCTCAGCCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	44586286	44591678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44586421_44587734_44587858_44591507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005816	chr12	+	321	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	8518	55284	8518	-53406	internal_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTACAGTGGTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	44587764	44592218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44587858_44591507_44591679_44592161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005817	chr12	+	340	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	12254	53383	12254	-51505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCTGTGAGTTAATGCG	NA	NA	NA	NA	NA	NA	NA	NA	44591500	44594119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44591679_44592161_44592219_44594014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005818	chr12	+	361	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	12908	50661	12908	-48783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACCCTCATCTCAAACG	NA	NA	NA	NA	NA	NA	NA	NA	44592154	44596841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44592219_44594014_44594127_44596656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005819	chr12	+	367	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	14830	49283	14830	-47405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTCCTTTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	44594076	44598219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44594127_44596656_44596842_44598087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005820	chr12	+	377	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	17494	40914	17494	-39036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCTTCCTTCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	44596740	44606588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44596842_44598087_44598220_44606444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005821	chr12	+	382	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	18851	38177	18851	-36299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGGCTCTATTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44598097	44609325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44598220_44606444_44606589_44609209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005822	chr12	+	287	2	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	29955	36589	29955	-34711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCATTGTTAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44609201	44610913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44609322_44610746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005823	chr12	+	440	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	31500	34307	31500	-32429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGGCAAGACCAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	44610746	44613195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44610914_44611009_44611158_44613070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005824	chr12	+	367	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	31771	32074	31771	-30196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGGTGGTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44611017	44615428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44611158_44613070_44613196_44615326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005825	chr12	+	424	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	33822	30315	33822	-28437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAAGGCTGGAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	44613068	44617187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44613196_44615326_44615429_44616992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005826	chr12	+	495	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	37746	28979	37746	-27101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTCCCCTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	44616992	44618523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44617191_44617288_44617360_44618297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005827	chr12	+	549	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	39049	26695	39049	-24817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAATGGGTGCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	44618295	44620807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44618524_44618984_44619101_44620602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005828	chr12	+	406	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	39780	24717	39780	-22839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACCTCGATAAGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	44619026	44622785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44619101_44620602_44620808_44622658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005829	chr12	+	445	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	41416	23939	41416	-22061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGGGTATGTATACA	NA	NA	NA	NA	NA	NA	NA	NA	44620662	44623563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44620808_44622658_44622782_44623386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005830	chr12	+	373	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	43475	10476	43475	-8598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCGTCGAGTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44622721	44637026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44622782_44623386_44623564_44636890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005831	chr12	+	344	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	44184	9660	44184	-7782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCTTGTTCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	44623430	44637842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44623564_44636890_44637023_44637763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005832	chr12	+	489	3	ISM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	57642	2094	57642	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCCTGAACACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	44636888	44645408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44637023_44637763_44637843_44645132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005833	chr12	+	289	1	ISM	ENSMUSG00000020598.17	ENSMUST00000110748.4	6275	28	271546	40	67968	1	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCCCCCCCACTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44647214	44647503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_44647200_44647500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005834	chr12	+	415	1	FSM	ENSMUSG00000112908.2	ENSMUST00000217815.2	345	1	30	-100	30	100	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTACATCTACACAATG	NA	NA	NA	NA	NA	NA	NA	NA	47859717	47860132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_47859700_47860100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005835	chr12	+	594	2	FSM	ENSMUSG00000112353.2	ENST00000549515.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGGTGTCACATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	50167364	50211852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_50167544_50211437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005836	chr12	+	430	1	Genic_Genomic	ENSMUSG00000112353.2	novel	NA	NA	NA	NA	44062	4	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTCACATGATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	50211426	50211856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_50211400_50211900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005837	chr12	-	1055	2	ISM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	305858	0	305858	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTCATACTAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	50389901	50388013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_50389004_50389836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005838	chr12	-	993	1	NIC	ENSMUSG00000002688.9	novel	3507	18	NA	NA	306753	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTCATACTAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	50389006	50388013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_50388000_50389000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005839	chr12	+	492	5	ISM	ENSMUSG00000020952.11	ENSMUST00000219434.2	2749	14	20112	2292	10644	-2292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGATAGTGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	51444474	51461706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005840	chr12	+	523	6	ISM	ENSMUSG00000020952.11	ENST00000553693.6	1352	15	25491	23867	25491	8896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGCTGACACCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	51459321	51472894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005841	chr12	+	954	4	ISM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	4837	2049	2858	-2049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGATGGCTGTCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	51644976	51650495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_51645083_51648596_51648701_51649429_51649657_51649978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005842	chr12	+	861	3	ISM	ENSMUSG00000020953.18	ENST00000475087.5	1538	9	7338	0	7338	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTCCCCCTAAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	51649456	51656575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_51649657_51649978_51650496_51656431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005843	chr12	+	644	4	NNC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	26000	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACTTGACCATGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	51763819	51785705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_51763934_51767418_51767506_51769762_51769836_51785335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005844	chr12	+	536	3	NIC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	29599	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGACGTTTGAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	51767418	51785715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_51767506_51769762_51769832_51785335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005845	chr12	-	1017	4	NNC	ENSMUSG00000020956.15	novel	1012	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCATGTTTTCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	52053285	52035094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_52035639_52046381_52046657_52051661_52051732_52053157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005846	chr12	-	744	1	Genic_Genomic	ENSMUSG00000020956.15	novel	NA	NA	NA	NA	8259	8	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTCTATGCCACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	52045025	52044281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_52044300_52045000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005847	chr12	+	184	2	ISM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	173300	26319	173300	-26319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTACATCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	52317819	52333208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_52317916_52333120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005848	chr12	+	165	1	ISM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	214843	0	214843	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGATATCAATATACTTC	NA	NA	NA	NA	NA	NA	NA	NA	52359362	52359527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_52359400_52359500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005849	chr12	+	1240	2	ISM	ENSMUSG00000035133.10	ENST00000556611.5	4762	7	14791	24819	2741	-24819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCCTATACCACTATT	NA	NA	NA	NA	NA	NA	NA	NA	52565600	52589364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_52566751_52589274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005850	chr12	+	987	2	ISM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	2988	25280	2988	-24828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACAGCTGAGAAGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	52565847	52589355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_52566751_52589271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005851	chr12	-	331	2	ISM	ENSMUSG00000100315.7	ENSMUST00000191400.2	466	3	256	0	256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTCTATTGAATTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52648845	52648377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_52648636_52648772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005852	chr12	+	420	3	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	1	237427	1	-237287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAAACAATTTAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	53547816	53878570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_53548062_53687236_53687320_53878478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005853	chr12	+	583	4	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	330659	24488	330659	-24348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTTTTCATGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	53878474	54091509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_53878569_53993945_53994121_54050235_54050355_54091314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005854	chr12	+	1093	5	ISM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	543550	907	543550	-767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGCCCAACCGGGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	54091365	54115090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_54091509_54095548_54095656_54108765_54108914_54112573_54112699_54114520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005855	chr12	+	614	1	ISM	ENSMUSG00000021010.10	ENSMUST00000223358.3	3663	11	820444	318	567568	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAAGACATGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	54115383	54115997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_54115400_54116000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005856	chr12	-	840	1	ISM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	24040	0	24040	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTGGTTCATTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	54226606	54225766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54225800_54226600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005857	chr12	-	934	3	ISM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	19943	853	19943	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATTCGTCCGAGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	54230703	54226619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54227442_54228416_54228491_54230665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005858	chr12	-	610	1	FSM	ENSMUSG00000106344.3	ENSMUST00000197752.3	80	1	12	-542	12	542	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTCTTTTATGGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	54692785	54692175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_54692200_54692800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005859	chr12	-	747	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	-1	600	-1	-600	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGTTTTGTAAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	54703359	54692776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_54693321_54703156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005860	chr12	-	1799	1	ISM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	23743	0	23683	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTAAGTCCTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54718923	54717124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54717100_54718900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005861	chr12	-	577	3	FSM	ENSMUSG00000054302.16	ENSMUST00000067272.9	590	3	13	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGAAAAGGAGTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	54742669	54720255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_54720576_54739658_54739742_54742495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005862	chr12	-	202	1	Genic_Genomic	ENSMUSG00000005656.10	novel	NA	NA	NA	NA	48933	1	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGAAGGTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54793334	54793132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_54793100_54793300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005863	chr12	-	410	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	43380	248	43380	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCATCAGCTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	54798887	54793682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54793845_54798566_54798653_54798725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005864	chr12	-	282	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	38402	5301	38402	-5301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACAAGGTACTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	54803865	54798735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54798886_54801074_54801162_54803820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005865	chr12	-	313	4	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	31754	7639	31754	-7639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGCTGTCATTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	54810513	54801073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54801162_54803820_54803861_54807183_54807260_54810404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005866	chr12	-	259	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	29803	13768	29803	-13768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTACAGATATATGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	54812464	54807202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54807260_54810404_54810511_54812368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005867	chr12	-	272	3	ISM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	27340	17024	27340	-17024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGTTAAGGATGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	54814927	54810458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54810511_54812368_54812465_54814803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005868	chr12	-	369	3	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	12186	21662	11965	-21361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAATGAGAGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	54830302	54814795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54814928_54817503_54817626_54830187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005869	chr12	-	271	3	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	11583	24438	11362	-24137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTGGAGAAGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	54830905	54817571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54817626_54830187_54830299_54830799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005870	chr12	+	265	1	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACCGCAGAAGACATAGA	NA	NA	NA	NA	NA	NA	NA	NA	54823305	54823570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr12_+_54823300_54823600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005871	chr12	-	203	3	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	199	37118	-22	-36817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAGGAATTTATCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	54842289	54830251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54830299_54830799_54830905_54842238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005872	chr12	-	828	1	ISM	ENSMUSG00000062929.9	ENST00000341223.8	2932	4	2415	0	2415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTTAAAACAGTGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	54906400	54905572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54905600_54906400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005873	chr12	-	1188	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	116	1636	116	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACCATATGAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	54909546	54907237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005874	chr12	-	517	1	ISM	ENSMUSG00000062929.9	ENST00000341223.8	2932	4	1057	1669	1057	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTACCATATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	54907758	54907241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54907200_54907800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005875	chr12	-	630	3	ISM	ENSMUSG00000062929.9	ENST00000672163.1	1410	4	0	879	0	-879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAACATCGACTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	54908962	54908120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_54908199_54908310_54908619_54908718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005876	chr12	-	257	2	FSM	ENSMUSG00000062198.6	ENST00000556705.5	249	2	-6	-2	-6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTTTTATTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55107975	55104016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_55104138_55107839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005877	chr12	-	122	1	NIC	ENSMUSG00000062198.6	novel	1105	8	NA	NA	3831	2	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTTTTATTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55104138	55104016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_55104000_55104100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005878	chr12	+	289	3	ISM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	-34	21558	-34	-21558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAGTATATCAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	55135952	55138118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55136065_55136920_55137013_55138033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005879	chr12	+	184	2	ISM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	2053	16972	2053	-16972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATACTCTTTATAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	55138039	55142704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55138119_55142599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005880	chr12	+	427	4	ISM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	7905	11403	7905	-11403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCAGTTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55143891	55148273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55143961_55144040_55144099_55146697_55146849_55148124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005881	chr12	+	421	4	ISM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	8093	10967	8093	-10967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTATAGTATTGAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	55144079	55148709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55144099_55146697_55146849_55148124_55148274_55148607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005882	chr12	+	335	3	ISM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	16446	1720	16446	-1720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCACATGGGTAAATATAA	NA	NA	NA	NA	NA	NA	NA	NA	55152432	55157956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55152511_55155286_55155458_55157870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005883	chr12	+	1756	3	ISM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	19311	-1408	19311	1032	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGTTCATGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	55155297	55161084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55155458_55157870_55157967_55159584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005884	chr12	+	342	1	ISM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	32664	2100	23724	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAAGTTAAAGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	55159710	55160052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55159700_55160100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005885	chr12	+	1511	1	Genic_Genomic	ENSMUSG00000073079.7	novel	NA	NA	NA	NA	24656	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGATGAAAGTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	55160642	55162153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_55160600_55162200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005886	chr12	+	3446	3	ISM	ENSMUSG00000095595.3	ENST00000280987.9	792	4	-1	-2431	-1	-50	intron_retention	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACATATAATAAATAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	55182450	55188839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55182520_55183902_55184001_55185560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005887	chr12	+	792	4	FSM	ENSMUSG00000095595.3	ENST00000280987.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATGGGAAAGATTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55182451	55186408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_55182520_55183902_55184001_55185560_55185941_55186162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005888	chr12	+	3339	1	Genic_Genomic	ENSMUSG00000095595.3	novel	NA	NA	NA	NA	3107	8	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGTTCTCGTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	55185558	55188897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_55185600_55188900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005889	chr12	+	726	4	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	4	23214	4	-23214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCAGCATGCTGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	55201892	55213144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005890	chr12	+	355	4	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	15777	14470	15777	-14470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTTCTAATGCTATA	NA	NA	NA	NA	NA	NA	NA	NA	55217665	55221888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55217765_55218953_55219021_55219100_55219159_55221757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005891	chr12	+	360	3	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	17210	13025	17210	-13025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCAGTTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55219098	55223333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55219159_55221757_55221909_55223184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005892	chr12	+	348	3	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	19881	12631	19881	-12631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACCTTTCAAAACACAAC	NA	NA	NA	NA	NA	NA	NA	NA	55221769	55223727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55221909_55223184_55223334_55223667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005893	chr12	+	358	4	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	21779	8801	21779	-8801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACGATCAAGGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	55223667	55227557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55223769_55224312_55224400_55227035_55227110_55227461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005894	chr12	+	282	2	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	25572	5840	25572	-5840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCTGGAAAACACTATCA	NA	NA	NA	NA	NA	NA	NA	NA	55227460	55230518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55227571_55230346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005895	chr12	+	700	3	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	28507	1232	28507	-1232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCGTTAACTTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	55230395	55235126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55230518_55232930_55233027_55234644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005896	chr12	+	338	1	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	32888	1244	32888	-1244	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGTTAAAGGGTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	55234776	55235114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55234800_55235100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005897	chr12	+	592	1	Genic_Genomic	ENSMUSG00000112449.2	novel	NA	NA	NA	NA	33879	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTCTTAGAAAAGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	55235767	55236359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_55235800_55236400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005898	chr12	+	3614	4	ISM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	6089	53	6089	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTACATATAATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	55252465	55263900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55252639_55257516_55257584_55258966_55259065_55260624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005899	chr12	+	793	4	NNC	ENSMUSG00000094103.3	novel	3863	5	NA	NA	11138	-2481	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATGGGAAAGATTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	55257514	55261472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_55257584_55258966_55259065_55260624_55261005_55261226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005900	chr12	+	3338	1	Genic_Genomic	ENSMUSG00000094103.3	novel	NA	NA	NA	NA	14245	6	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGAGTTCTCGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	55260621	55263959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_55260600_55264000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005901	chr12	+	592	4	ISM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	173	22378	173	-21562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTATATCAACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	55277125	55288243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005902	chr12	+	316	4	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	48	16973	48	-16973	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCTTTATAGTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	55286158	55292832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55286189_55287044_55287137_55288157_55288243_55292723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005903	chr12	+	200	2	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	8052	12877	8052	-12877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGCTATAGTAAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	55294162	55296928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55294223_55296788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005904	chr12	+	216	2	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	10676	11314	10676	-11314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCCTTTAAAGACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55296786	55298491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55296940_55298428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005905	chr12	+	210	2	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	12319	10832	12319	-10832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTTTCAAAACACAACCT	NA	NA	NA	NA	NA	NA	NA	NA	55298429	55298973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55298578_55298911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005906	chr12	+	190	2	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	12801	10160	12801	-10160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTTAGCAAAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55298911	55299645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55299013_55299556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005907	chr12	+	356	3	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	16212	5424	16212	-5424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTGGAAAACACTATCA	NA	NA	NA	NA	NA	NA	NA	NA	55302322	55304381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55302398_55302752_55302862_55304209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005908	chr12	+	267	2	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	18101	2520	18101	-2520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAAATTCTTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	55304211	55307285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55304381_55307187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005909	chr12	+	1610	2	ISM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	21070	-613	21070	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTCCAGAGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	55307180	55310418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55307284_55308911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005910	chr12	+	336	1	ISM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	32091	1242	22933	-426	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATAAGTTAAAGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	55309043	55309379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55309000_55309400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005911	chr12	+	1489	1	Genic_Genomic	ENSMUSG00000079108.7	novel	NA	NA	NA	NA	23880	858	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGGATGAAAGTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	55309990	55311479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_55310000_55311500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005912	chr12	-	1537	1	Genic_Genomic	ENSMUSG00000021022.10	novel	NA	NA	NA	NA	22474	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCTTAGGATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	55327309	55325772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_55325800_55327300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005913	chr12	-	1649	3	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	18118	1330	18118	-1330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGGTGCCACCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55331665	55327105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_55328591_55329698_55329759_55331561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005914	chr12	+	719	5	ISM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	10	6089	10	-5945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAGCCGGAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55445569	55459150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005915	chr12	+	828	6	ISM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	8692	-1	8692	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTGCATCCTGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55454251	55465240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005916	chr12	-	1178	5	ISM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	924	-3	806	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCCGCTCGTTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	55538508	55536191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005917	chr12	-	562	1	NIC	ENSMUSG00000021025.9	novel	1578	6	NA	NA	2558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	55536756	55536194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_55536200_55536800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005918	chr12	-	518	3	ISM	ENSMUSG00000021025.9	ENST00000557140.5	1302	6	1669	235	1669	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGGGGAGGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	55537645	55536458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_55536755_55537190_55537323_55537555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005919	chr12	-	804	5	ISM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	214	996	96	-967	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTCCTCCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	55539218	55537190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005920	chr12	-	1362	2	ISM	ENSMUSG00000021027.18	ENST00000637992.1	8263	41	98366	115838	98125	-106936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGCTCAAACTTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	55769427	55766368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_55766494_55768190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005921	chr12	-	1274	2	ISM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	82508	109069	82508	-109069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTAGATACAATCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	55785044	55768501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_55769727_55784995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005922	chr12	+	495	2	ISM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	29627	1207	29627	-1207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTCAGTGTTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	55912735	55915314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_55912863_55914946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005923	chr12	+	499	1	Genic_Genomic	ENSMUSG00000012076.9	novel	NA	NA	NA	NA	32915	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGTTGTGTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	55916023	55916522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_55916000_55916500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005924	chr12	-	622	3	ISM	ENSMUSG00000021028.9	ENST00000318473.11	1246	8	6453	-24	6453	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGTGTATAAACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	56382689	56375105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_56375582_56377013_56377053_56382582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005925	chr12	-	746	4	ISM	ENSMUSG00000021028.9	ENST00000621657.4	1172	7	4533	-17	4533	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACAAATGAATGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	56384609	56375112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_56375547_56382582_56382681_56384087_56384241_56384548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005926	chr12	-	597	2	NNC	ENSMUSG00000021028.9	novel	1246	8	NA	NA	6460	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACAAATGAATGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	56382682	56375112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_56375582_56382554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005927	chr12	-	714	5	ISM	ENSMUSG00000021028.9	ENST00000318473.11	1246	8	4526	96	4526	-96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGACTTTATATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	56384616	56375225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_56375582_56377013_56377053_56382582_56382681_56384087_56384241_56384548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005928	chr12	-	660	6	ISM	ENSMUSG00000021028.9	ENST00000318473.11	1246	8	95	7453	95	-7453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTAATGTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	56389047	56382582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005929	chr12	-	247	1	FSM	ENSMUSG00000066491.5	ENSMUST00000149263.2	231	1	145	-161	145	161	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	56420463	56420216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_56420200_56420500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005930	chr12	+	596	2	FSM	ENSMUSG00000098172.8	ENST00000521292.2	595	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGCTACAGCACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	56581765	56584379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_56582170_56584187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005931	chr12	+	1846	3	ISM	ENSMUSG00000001497.19	ENST00000402703.6	2784	4	1198	449	1028	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTATCCCAGTCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	56743451	56757609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_56743986_56746799_56746940_56756437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005932	chr12	+	1237	1	ISM	ENSMUSG00000001497.19	ENSMUST00000153250.9	4232	5	18270	1434	14398	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTAAACCCTTCTATAC	NA	NA	NA	NA	NA	NA	NA	NA	56756821	56758058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_56756800_56758100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005933	chr12	+	765	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	8	947	8	-459	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGGTGGAGCCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	57277205	57285721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_57277398_57285148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005934	chr12	+	436	2	FSM	ENSMUSG00000079104.5	ENST00000676092.1	476	2	41	-1	41	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTTTGAAAATAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	57285239	57286181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_57285570_57286075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005935	chr12	+	712	1	ISM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	8759	0	758	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAATCCATTACTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57285956	57286668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_57286000_57286700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005936	chr12	-	1701	1	ISM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	51934	0	47152	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	59006869	59005168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_59005200_59006900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005937	chr12	-	1094	2	ISM	ENSMUSG00000020986.14	ENSMUST00000165134.2	2529	18	40232	-687	40232	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAGTCTGACAATGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	59013789	59005802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_59006873_59013765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005938	chr12	-	260	1	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	-5	9	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGGAAAAACTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59054026	59053766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_59053800_59054000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005939	chr12	-	464	2	FSM	ENSMUSG00000020986.14	ENST00000553970.1	463	2	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAATACATGGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59058797	59053773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_59054022_59058581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005940	chr12	-	437	2	NNC	ENSMUSG00000020986.14	novel	463	2	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATTAAATACATGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59058776	59053775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_59054018_59058581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005941	chr12	+	310	3	ISM	ENSMUSG00000060121.16	ENST00000396249.7	759	9	10	10819	10	-10819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCCCTTTTAATGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	59060268	59063745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_59060400_59060755_59060841_59063651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005942	chr12	+	268	3	NIC	ENSMUSG00000060121.16	novel	759	9	NA	NA	3393	-9653	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGGTGCCATAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	59063651	59064911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_59063746_59063953_59064014_59064797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005943	chr12	+	248	3	ISM	ENSMUSG00000060121.16	ENST00000250379.13	1003	9	3697	6265	3697	-6035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTTTTCTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	59063955	59068529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_59064014_59064797_59064912_59068453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005944	chr12	+	439	6	ISM	ENSMUSG00000060121.16	ENST00000396249.7	759	9	3697	0	3697	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTACCTCCTAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	59063955	59074564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59074522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005945	chr12	+	272	3	ISM	ENSMUSG00000060121.16	ENST00000250379.13	1003	9	4548	2908	4548	-2678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTGCTGGTGGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	59064806	59071886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_59064912_59068453_59068523_59071788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005946	chr12	+	393	3	ISM	ENSMUSG00000060121.16	ENST00000250379.13	1003	9	11530	49	11530	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAAAAAGCCCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	59071788	59074745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_59071900_59073640_59073700_59074522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005947	chr12	+	275	1	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	14262	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGGGGGGTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	59074520	59074795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_59074500_59074800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005948	chr12	-	415	1	ISM	ENSMUSG00000020993.10	ENST00000347691.9	1037	5	17738	83	17738	4	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATTAATTTAATCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	59090288	59089873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_59089900_59090300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005949	chr12	-	537	3	ISM	ENSMUSG00000020993.10	ENSMUST00000218686.2	785	4	13239	-42	13061	42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTTATTTAAAAAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	59094965	59090076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_59090463_59091038_59091133_59094908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005950	chr12	-	360	4	ISM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	9752	1166	9531	-811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTAAGTTCAGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	59098495	59091043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_59091133_59094908_59094993_59097053_59097172_59098426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005951	chr12	-	493	3	ISM	ENSMUSG00000020993.10	ENSMUST00000217863.2	797	5	-9	6820	0	-6820	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAGATAAACCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59108247	59097052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_59097172_59098426_59098495_59107941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005952	chr12	+	449	5	ISM	ENSMUSG00000020994.6	ENST00000553331.5	660	6	874	0	874	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGGTTTTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	59114561	59117083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_59114637_59115070_59115140_59115511_59115585_59115901_59115978_59116927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005953	chr12	+	1109	2	ISM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	3494	1604	3476	-1604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGTAGTTCCAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	59117163	59119180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_59117304_59118211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005954	chr12	+	1006	1	ISM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	6109	0	6091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAATATCTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	59119778	59120784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_59119800_59120800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005955	chr12	+	747	1	FSM	ENSMUSG00000066487.4	ENSMUST00000085368.4	882	1	191	-56	191	56	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTGAATCTTTAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	59127995	59128742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_59128000_59128700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005956	chr12	-	552	2	FSM	ENSMUSG00000035329.8	ENST00000554190.1	546	2	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCATTTTTACAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	59265970	59249238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_59249466_59265645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005957	chr12	+	499	2	Antisense	novelGene_ENSMUSG00000035329.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAGCTGGGGCCACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	59249239	59265920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_59249459_59265640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005958	chr12	+	1531	1	FSM	ENSMUSG00000091905.4	ENSMUST00000167639.4	691	1	-119	-721	-119	721	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAATATAAATGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	64832965	64834496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_64833000_64834500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005959	chr12	+	1927	2	ISM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	198	45843	198	-45840	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCTCTCAAGGAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	65012911	65023504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_65014803_65023468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005960	chr12	+	699	1	ISM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	56071	0	55935	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	65068648	65069347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_65068600_65069300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005961	chr12	-	1023	7	NNC	ENSMUSG00000020949.10	novel	1022	7	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	65120778	65109197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115771_65115884_65116724_65116827_65120588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005962	chr12	-	1022	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	65120781	65109197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005963	chr12	+	666	1	ISM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	26388	0	26388	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	65109494	65110160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_65109500_65110200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005964	chr12	+	673	1	FSM	ENSMUSG00000113948.2	ENSMUST00000221295.2	556	1	-37	-80	-37	80	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCAATAATGCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	67557492	67558165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_67557500_67558200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005965	chr12	-	393	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTGTGTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69205962	69204494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_69204596_69205434_69205535_69205770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005966	chr12	-	557	1	FSM	ENSMUSG00000049751.7	ENSMUST00000110619.2	1276	1	726	-7	699	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTTGATTCTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	69230061	69229504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_69229500_69230100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005967	chr12	-	533	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	-4	-3	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	69230861	69229511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_69229940_69230756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005968	chr12	-	449	2	NNC	ENSMUSG00000049751.7	novel	526	2	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGCCTTGTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	69230791	69229513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_69229928_69230756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005969	chr12	-	645	2	FSM	ENSMUSG00000049751.7	ENSMUST00000110620.2	757	2	5	107	5	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAAGTGATCCAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	69230755	69229611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_69229940_69230438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005970	chr12	+	2311	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	304	-1	304	1	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCACATCTTAATATT	NA	NA	NA	NA	NA	NA	NA	NA	69231234	69233545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_69231200_69233500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005971	chr12	-	3391	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTTACCTACATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	69245204	69235860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_69237169_69239581_69239726_69243265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005972	chr12	+	355	4	ISM	ENSMUSG00000020978.11	ENST00000554589.5	1343	12	6550	4740	6550	-4740	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATACCGGGTGAGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	69350305	69352472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_69350424_69350654_69350737_69351317_69351402_69352401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005973	chr12	+	387	2	ISM	ENSMUSG00000020978.11	ENST00000557247.1	1281	11	11976	-2	11976	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTAACACCAGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	69355731	69357225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_69355820_69356926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005974	chr12	+	299	1	ISM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	13431	236	13171	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTAACACCAGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	69356926	69357225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_69356900_69357200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005975	chr12	-	1108	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	69629883	69624401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005976	chr12	-	658	4	FSM	ENSMUSG00000020988.10	ENST00000555610.1	657	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTCTCTACAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	69768969	69753886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_69754124_69759376_69759528_69768085_69768238_69768851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005977	chr12	-	236	1	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	14846	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCTTCTCTACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	69754123	69753887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_69753900_69754100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005978	chr12	-	520	3	NNC	ENSMUSG00000020988.10	novel	657	4	NA	NA	744	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCTTCTCTACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	69768225	69753887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_69754124_69759376_69759521_69768085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005979	chr12	+	1023	4	ISM	ENSMUSG00000054894.7	ENST00000557421.7	586	5	48	5355	48	-362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGCTCAAGCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	69784771	69791070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_69784836_69787672_69787882_69788418_69788591_69790492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005980	chr12	+	665	1	ISM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	19046	0	6046	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCTAGTCTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	69790769	69791434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_69790800_69791400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005981	chr12	-	1531	1	ISM	ENSMUSG00000034761.16	ENSMUST00000110567.8	4250	32	87729	0	87576	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTTCTTTAAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	69852054	69850523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_69850500_69852100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005982	chr12	+	666	2	FSM	ENSMUSG00000113491.2	ENST00000513176.2	1246	2	19	561	19	-558	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGACAGGCATTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	70027900	70028684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_70027964_70028081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005983	chr12	+	698	2	NNC	ENSMUSG00000113491.2	novel	1246	2	NA	NA	81	-514	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACAGGTCATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	70027962	70028728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_70028014_70028081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005984	chr12	+	678	1	Genic_Genomic	ENSMUSG00000113491.2	novel	NA	NA	NA	NA	687	1	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATTCTCTGCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70028568	70029246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_70028600_70029200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005985	chr12	-	781	5	ISM	ENSMUSG00000021069.18	ENST00000544180.6	2625	19	30575	15	30575	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAACTTCCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	70243798	70237613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005986	chr12	-	1374	1	ISM	ENSMUSG00000021071.18	ENSMUST00000110522.10	4405	14	101444	0	101384	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTCTAGAGAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	70292680	70291306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_70291300_70292700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005987	chr12	-	1396	2	ISM	ENSMUSG00000021071.18	ENSMUST00000223160.2	3574	10	98956	56	98920	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGAAGCTCAAATCGGG	NA	NA	NA	NA	NA	NA	NA	NA	70295144	70291935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_70293226_70295038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005988	chr12	-	688	5	NNC	ENSMUSG00000021071.18	novel	2638	12	NA	NA	79095	-2707	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAACAGGTACCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70314969	70297739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_70298035_70298793_70298818_70299212_70299259_70301811_70302001_70314835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005989	chr12	-	741	5	ISM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	65542	6779	65345	-6779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTGAGCTGTCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	70328719	70301811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_70302001_70314835_70314975_70319083_70319230_70327329_70327484_70328606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005990	chr12	-	1057	4	ISM	ENSMUSG00000021071.18	ENSMUST00000222603.3	3700	7	277	15686	217	-15684	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTTACTAGCTTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	70393847	70328606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_70328718_70337044_70337168_70339039_70339136_70393120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005991	chr12	+	1350	4	ISM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	7250	928	4333	-928	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGAAACATCTACTACT	NA	NA	NA	NA	NA	NA	NA	NA	70507118	70513886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_70507165_70507252_70507355_70511173_70511241_70512751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005992	chr12	+	1160	1	ISM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	13786	0	10869	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGTGTTCTCATAAG	NA	NA	NA	NA	NA	NA	NA	NA	70513654	70514814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_70513700_70514800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005993	chr12	+	2412	1	ISM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	74309	0	35935	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	NA	NA	NA	NA	NA	NA	NA	NA	70946596	70949008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_70946600_70949000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005994	chr12	+	889	3	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	20187	2235	20187	-2235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGACAGGAAGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	71004817	71009257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71004888_71006614_71006817_71008640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005995	chr12	+	664	1	ISM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	26198	0	26198	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGCTCTGCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	71010828	71011492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71010800_71011500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005996	chr12	+	2236	7	ISM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	10054	151	9992	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTAATGTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	71031448	71042970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005997	chr12	+	1895	1	Genic_Genomic	ENSMUSG00000060073.10	novel	NA	NA	NA	NA	19774	4	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACTTAGAACCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	71041230	71043125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_71041200_71043100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005998	chr12	+	298	2	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	51218	28592	51218	-28592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGTGCACTACTACGGA	NA	NA	NA	NA	NA	NA	NA	NA	71113981	71116774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71114113_71116607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000005999	chr12	+	299	2	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	59821	22110	59821	-22110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCAAAAGCGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	71122584	71123256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71122844_71123216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006000	chr12	+	309	2	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	70473	11022	70473	-11022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAGGAAAAGATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	71133236	71134344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71133436_71134234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006001	chr12	+	314	2	ISM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	71471	925	71471	-925	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCACAGAAAGCACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	71134234	71144441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71134382_71144274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006002	chr12	-	430	1	Genic_Genomic	ENSMUSG00000021079.17	novel	NA	NA	NA	NA	8438	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTCTTTACTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	71170375	71169945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_71169900_71170400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006003	chr12	-	636	4	FSM	ENSMUSG00000021079.17	ENST00000556007.6	629	4	-2	-5	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATCATTGAGCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71178815	71169957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_71170392_71172235_71172332_71173106_71173172_71178774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006004	chr12	-	404	4	FSM	ENSMUSG00000021079.17	ENST00000556367.6	400	4	0	-4	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTCACCAGAAAGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	71178813	71170169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_71170374_71172235_71172332_71173106_71173172_71178774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006005	chr12	-	284	2	NNC	ENSMUSG00000021079.17	novel	794	4	NA	NA	6480	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTTCACCAGAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	71172333	71170171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_71170358_71172235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006006	chr12	-	303	2	ISM	ENSMUSG00000021079.17	ENSMUST00000221892.2	734	5	11068	209	6480	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTTCACCAGAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	71172333	71170171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_71170377_71172235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006007	chr12	-	308	3	NNC	ENSMUSG00000021079.17	novel	734	5	NA	NA	5685	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTTCACCAGAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	71173128	71170171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_71170377_71172250_71172332_71173106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006008	chr12	+	257	2	ISM	ENSMUSG00000034601.18	ENSMUST00000045907.16	4507	28	12401	90621	12401	-90621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTCAACTTGGCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	71197014	71199456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71197239_71199423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006009	chr12	+	185	1	ISM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	106271	0	105279	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTGTTTCTTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	71289892	71290077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71289900_71290100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006010	chr12	+	1858	4	FSM	ENSMUSG00000044548.12	ENST00000541264.2	2399	4	15	526	15	-428	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGCTCGCAGGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	71357466	71365240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_71357740_71359459_71359593_71360558_71360715_71363944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006011	chr12	+	1363	1	ISM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	7747	1114	6953	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCACTAGGATAAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	71364404	71365767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_71364400_71365800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006012	chr12	+	1038	3	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	96029	1836	96029	-1836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTGAGAACATCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	72032532	72037263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_72032589_72035659_72035831_72036452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006013	chr12	+	844	1	ISM	ENSMUSG00000034574.11	ENSMUST00000223272.2	5835	26	160410	2	101758	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCTGTTTTCTATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	72038261	72039105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_72038300_72039100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006014	chr12	-	420	1	Genic_Genomic	ENSMUSG00000019718.9	novel	NA	NA	NA	NA	11593	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGAGTCAACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72120620	72120200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_72120200_72120600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006015	chr12	+	289	3	ISM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	227	11391	2	-10791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGGTTCTTCATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	72132857	72136844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_72132958_72136106_72136181_72136729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006016	chr12	+	1589	6	ISM	ENSMUSG00000005078.17	ENST00000356057.9	1636	7	3269	0	3269	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTACGACTCATATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72136124	72148295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006017	chr12	+	257	1	ISM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	15348	0	15123	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	72147978	72148235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_72148000_72148200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006018	chr12	-	193	1	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	14364	0	14364	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGACTGCAGACTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	72697319	72697126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_72697100_72697300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006019	chr12	-	265	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	12549	126	12549	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGTTTAATTTTTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	72699134	72697252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_72697392_72699008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006020	chr12	-	256	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	11684	1967	11684	-1967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGGCAGTATATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	72699999	72699093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_72699225_72699874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006021	chr12	-	289	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	8444	2748	8444	-2748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAAATCATCCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	72703239	72699874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_72699998_72703073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006022	chr12	-	261	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	7474	6034	7474	-6034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGATTGTGACTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	72704209	72703160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_72703314_72704101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006023	chr12	-	263	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	5410	6975	5410	-6975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGCATTTTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	72706273	72704101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_72704209_72706117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006024	chr12	-	324	2	ISM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	110	8991	110	-8991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAATTCCCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	72711573	72706117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_72706271_72711402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006025	chr12	-	741	1	Genic_Genomic	ENSMUSG00000051367.9	novel	NA	NA	NA	NA	4613	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTATTGTTTTTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	73089340	73088599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_73088600_73089300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006026	chr12	-	1448	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	591	1277	591	-1277	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATGAAGAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	73093362	73089877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_73090604_73092640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006027	chr12	-	2042	4	ISM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	1432	0	1432	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAATTCAAGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	73332051	73326784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006028	chr12	+	1941	2	ISM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	37014	158	37014	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGATTCTGGTACATGG	NA	NA	NA	NA	NA	NA	NA	NA	73991691	73994146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_73991812_73992325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006029	chr12	+	1878	1	ISM	ENSMUSG00000021109.14	ENSMUST00000110461.8	4385	15	44278	0	37749	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	73992426	73994304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_73992400_73994300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006030	chr12	+	1235	1	ISM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	23206	0	23206	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTATTTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	74034505	74035740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_74034500_74035700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006031	chr12	+	1658	4	FSM	ENSMUSG00000044912.12	ENST00000430451.3	1706	4	56	-8	56	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATTTTGTGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74279977	74314412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_74280004_74281582_74282024_74284954_74285145_74313411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006032	chr12	-	1079	2	Antisense	novelGene_ENSMUSG00000044912.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGGAGGGGAAGAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	74314308	74284955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_-_74285142_74313415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006033	chr12	+	1010	1	NIC	ENSMUSG00000044912.12	novel	8156	7	NA	NA	33481	8	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATTTTGTGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74313402	74314412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_74313400_74314400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006034	chr12	-	577	3	FSM	ENSMUSG00000113031.2	ENSMUST00000223381.2	636	3	59	0	59	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGAGGAGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	74363877	74360974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_74361283_74362065_74362187_74363729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006035	chr12	-	1724	4	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	88743	-1	88743	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTGTCTCAAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75134559	74944338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006036	chr12	-	1200	5	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	56501	79085	56501	-79085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCATTCCGATTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	75166801	75023424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_75023498_75054373_75054574_75134178_75134606_75160964_75161358_75166694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006037	chr12	-	1207	6	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	38844	110133	38844	-110133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGAAATTATATCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	75184458	75054472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_75054574_75134178_75134606_75160964_75161358_75166694_75166811_75177671_75177801_75184417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006038	chr12	+	781	3	ISM	ENSMUSG00000046768.14	ENSMUST00000118602.8	2396	5	27	4070	27	-4070	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACCCAGCCTCTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	75355122	75438521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_75355776_75422121_75422181_75438452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006039	chr12	+	717	2	ISM	ENSMUSG00000046768.14	ENSMUST00000055390.6	2350	5	85642	734	85642	-734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCCAATCACTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	75440737	75447496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_75440839_75446880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006040	chr12	+	676	1	ISM	ENSMUSG00000046768.14	ENSMUST00000055390.6	2350	5	92459	0	92459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTAGTACTGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75447554	75448230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_75447600_75448200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006041	chr12	-	2919	1	ISM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	142401	0	142401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTGGATGCAGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	75500573	75497654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_75497700_75500600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006042	chr12	-	2970	2	ISM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	136476	0	136476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTGGATGCAGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	75506498	75497654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_75500588_75506461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006043	chr12	-	294	1	Genic_Genomic	ENSMUSG00000045690.9	novel	NA	NA	NA	NA	38640	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGTATCTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	75677661	75677367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_75677400_75677700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006044	chr12	-	112	1	FSM	ENSMUSG00000046580.11	ENSMUST00000121461.2	292	1	180	0	180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCTTCACGTCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	76199221	76199109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_76199100_76199200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006045	chr12	-	451	3	FSM	ENSMUSG00000056459.15	ENST00000555424.1	451	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGGGCTTCACGTTA	NA	NA	NA	NA	NA	NA	NA	NA	76402834	76358576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_76358773_76396091_76396175_76402662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006046	chr12	-	201	1	NIC	ENSMUSG00000056459.15	novel	1373	3	NA	NA	44058	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGGGCTTCACGTTA	NA	NA	NA	NA	NA	NA	NA	NA	76358777	76358576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_76358600_76358800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006047	chr12	-	266	2	NNC	ENSMUSG00000056459.15	novel	451	3	NA	NA	6657	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTCCTGCACAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	76396178	76358587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_76358767_76396091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006048	chr12	-	858	1	FSM	ENSMUSG00000112096.2	ENSMUST00000220077.2	857	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCCACACTGGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	76392154	76391296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_76391300_76392200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006049	chr12	-	842	1	NIC	ENSMUSG00000056459.15	novel	451	3	NA	NA	6276	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGAGCTTTTCTATAC	NA	NA	NA	NA	NA	NA	NA	NA	76396559	76395717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_76395700_76396600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006050	chr12	-	963	2	ISM	ENSMUSG00000056459.15	ENSMUST00000176102.8	2707	3	1078	1703	-1	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTTTGCAGATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	76402836	76396258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_76397048_76402662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006051	chr12	+	2535	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	-4	-5	-4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTGGCGTTTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	76451178	76453713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_76451200_76453700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006052	chr12	+	675	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTATGTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76812312	76829954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006053	chr12	-	1634	2	FSM	ENSMUSG00000059436.14	ENST00000555932.5	1611	2	-2	-21	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCCTTGTCGGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	77008923	76984055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_76985530_77008763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006054	chr12	+	1620	2	Antisense	novelGene_ENSMUSG00000112008.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTCACTCACTCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	76984059	77008915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_76985521_77008756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006055	chr12	-	737	1	ISM	ENSMUSG00000059436.14	ENSMUST00000110395.11	1942	5	24102	78	23942	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAAGAATTGTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	76984857	76984120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_76984100_76984900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006056	chr12	-	251	2	ISM	ENSMUSG00000059436.14	ENST00000555667.5	564	4	22104	0	21933	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGGTGACCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76986866	76986163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_76986289_76986740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006057	chr12	-	127	1	ISM	ENSMUSG00000059436.14	ENST00000284165.10	3053	4	22647	2043	22509	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGGTGACCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76986290	76986163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_76986200_76986300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006058	chr12	-	978	3	ISM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	5	2154	0	-38	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACCGCCTGGGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	77008970	76986201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_76986865_76999942_77000051_77008763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006059	chr12	-	252	3	ISM	ENSMUSG00000059436.14	ENST00000557746.5	564	5	22104	-1	21933	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTCCTCCCTCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	76986866	76986243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_76986289_76986423_76986505_76986740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006060	chr12	-	315	3	ISM	ENSMUSG00000059436.14	ENST00000557746.5	564	5	8919	178	8748	-178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACCAGATTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	77000051	76986422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_76986505_76986740_76986865_76999942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006061	chr12	+	936	3	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	-185	143540	46	-143540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTTTGAAATACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	77285620	77379103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_77286028_77324134_77324230_77378669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006062	chr12	+	534	2	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	92882	110783	92849	-110783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATTATACACATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	77378687	77411860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_77379104_77411742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006063	chr12	+	602	3	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	154689	27150	154656	-27150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGTATTTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	77440494	77495493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_77440612_77459485_77459724_77495246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006064	chr12	+	1411	4	ISM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	209439	-10	209406	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTCTCCATTAGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	77495244	77522653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_77495494_77496873_77497051_77510880_77510985_77521772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006065	chr12	+	673	3	ISM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	211043	987	211043	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCATCTCGGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	77496881	77522125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_77497051_77510833_77510985_77521772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006066	chr12	+	490	1	ISM	ENSMUSG00000021065.17	ENST00000673929.1	3496	11	237015	0	236751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGCTCTTGTCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	77522589	77523079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_77522600_77523100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006067	chr12	+	103	2	ISM	ENSMUSG00000047454.13	ENST00000459628.5	1511	11	116969	214305	116596	-214305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGATAGTACCAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	78390123	78423155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_78390205_78423133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006068	chr12	+	1095	3	ISM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	81874	2463	81874	-2463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTCAGGGCCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	78877639	78885025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_78877830_78879138_78879250_78884231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006069	chr12	+	1016	1	ISM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	90707	0	90707	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGTGTCCTTTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	78886472	78887488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_78886500_78887500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006070	chr12	-	1947	1	Genic_Genomic	ENSMUSG00000021114.10	novel	NA	NA	NA	NA	18889	2	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCACATTTACACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	78889443	78887496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_78887500_78889400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006071	chr12	-	2160	4	ISM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	13159	956	13079	-956	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAAGAAAAACTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	78895253	78888454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006072	chr12	-	1943	2	NNC	ENSMUSG00000021114.10	novel	1029	5	NA	NA	16309	-971	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGACCCACATGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	78892023	78888469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_78890385_78891995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006073	chr12	-	1031	5	FSM	ENSMUSG00000021114.10	ENST00000555474.5	1029	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGTTTCTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	78908332	78889757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78904000_78904119_78908192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006074	chr12	+	673	3	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	2	12376	2	-12376	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAACTGTAAGTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	78908594	78921408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_78908955_78913299_78913542_78921337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006075	chr12	+	574	4	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	4702	6965	4702	-6965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCGAGCAGGTAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	78913294	78926819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_78913542_78921337_78921418_78923865_78924018_78926724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006076	chr12	+	479	4	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	15295	3609	15295	-3609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGATCAGGATCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	78923887	78930175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_78924018_78926724_78926832_78927905_78928004_78930031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006077	chr12	+	787	4	ISM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	18153	1761	18153	-1761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAACAATCCCAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	78926745	78932023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_78926832_78927905_78928004_78930031_78930176_78931564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006078	chr12	+	486	1	Genic_Genomic	ENSMUSG00000021116.11	novel	NA	NA	NA	NA	24715	9	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCCAGCCAGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	78933307	78933793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_78933300_78933800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006079	chr12	+	653	3	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	13079	24770	13079	-24770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGTAGGCCCTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	79100377	79101928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_79100454_79101262_79101345_79101433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006080	chr12	+	669	3	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	14394	17299	14394	-17299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGTGGCTGTCCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	79101692	79109399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_79102189_79108745_79108828_79109308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006081	chr12	+	724	3	ISM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	38120	0	38120	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTTTATATTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	79125418	79126698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_79125509_79125733_79125881_79126211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006082	chr12	+	489	1	NIC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	38911	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTTTATATTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	79126209	79126698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_79126200_79126700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006083	chr12	-	633	1	ISM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	8355	0	8349	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGACTTGTTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	79128070	79127437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_79127400_79128100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006084	chr12	-	655	2	ISM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	5952	1262	5946	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTCTAAAAGTTAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	79130473	79128699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_79129271_79130389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006085	chr12	-	930	4	ISM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	7581	0	7581	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCATTTTCTGATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	79211860	79202790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006086	chr12	-	555	1	ISM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	16096	0	16096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCATTTTCTGATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	79203345	79202790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_79202800_79203300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006087	chr12	-	920	5	ISM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	15	1831	15	-1831	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTTCAAAAACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	79219426	79204621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006088	chr12	-	1563	1	ISM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	16394	0	13210	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTATGGGGATATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	79222673	79221110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_79221100_79222700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006089	chr12	-	1884	3	ISM	ENSMUSG00000066441.15	ENSMUST00000085254.7	1673	7	5627	-783	3775	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCTACCTCCACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	79232108	79221541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_79223025_79229426_79229617_79231897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006090	chr12	-	930	5	NNC	ENSMUSG00000066441.15	novel	933	5	NA	NA	13	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCCCTAACCAGGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	79235870	79222657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_79223025_79229426_79229617_79233187_79233293_79235254_79235411_79235758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006091	chr12	+	1032	4	ISM	ENSMUSG00000059060.16	ENSMUST00000171210.3	1858	11	360542	-3	360261	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGCTGGGCCACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	79704597	79861467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_79704695_79813844_79813949_79849963_79850043_79860715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006092	chr12	-	524	1	Genic_Genomic	ENSMUSG00000112765.2	novel	NA	NA	NA	NA	7192	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGAAAAGAATTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	79964315	79963791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_79963800_79964300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006093	chr12	-	2251	1	ISM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	3009	0	2990	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTCTATAGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80156778	80154527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_80154500_80156800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006094	chr12	-	2316	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	77	597	58	347	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATCTTCATATTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	80159710	80155124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_80157323_80159592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006095	chr12	+	1690	2	Antisense	novelGene_ENSMUSG00000021127.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCTTCCTGTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	80155471	80157256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_80156203_80156297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006096	chr12	-	246	2	ISM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	86947	3490	86947	-3490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGATCTTGACCCGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	80219918	80218585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_80218650_80219736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006097	chr12	-	203	2	ISM	ENSMUSG00000015143.16	ENST00000684713.1	3476	21	67919	15728	67646	-15177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCAGGAGAAGTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80239219	80230272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_80230398_80239141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006098	chr12	+	388	1	ISM	ENSMUSG00000112336.2	ENSMUST00000218666.2	735	2	727	0	727	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACGCCACCGCCCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	80306943	80307331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80306900_80307300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006099	chr12	-	384	2	ISM	ENSMUSG00000049106.8	ENST00000554215.5	4650	9	87559	3319	87559	-3319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCGCTCAGGCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	80395201	80386774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_80387051_80395093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006100	chr12	+	274	2	ISM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	116	22196	116	-22195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAGCCACAGCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	80509984	80522700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80510055_80522496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006101	chr12	+	628	3	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	21	17410	17	-17410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGGTTTGCATGCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	80522513	80527485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80522654_80522731_80522963_80527228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006102	chr12	+	554	3	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	239	13810	235	-13810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTCCCTTCTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	80522731	80531085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80522963_80527228_80527486_80531019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006103	chr12	+	824	4	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	4735	7234	4731	-7234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGACTCGTCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	80527227	80537661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80527486_80531019_80531147_80536175_80536508_80537554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006104	chr12	+	868	4	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	13748	5222	13744	-5222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCATACTGCTCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	80536240	80539673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80536508_80537554_80537662_80537868_80538005_80539315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006105	chr12	+	1824	3	ISM	ENSMUSG00000032705.10	ENST00000409018.7	3049	9	15374	12	15370	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAGCACAAAGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	80537866	80544883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80538005_80539315_80539673_80543554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006106	chr12	+	553	1	ISM	ENSMUSG00000032705.10	ENST00000312994.9	3942	9	22743	0	22743	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGCAAAGCCAGGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80545239	80545792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80545200_80545800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006107	chr12	-	1296	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCTTATTTATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80691115	80680792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006108	chr12	-	1263	4	NNC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCTTATTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	80691095	80680794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_80681302_80684263_80684385_80687741_80687819_80690537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006109	chr12	-	1294	4	NNC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCTTATTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	80691117	80680794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_80681302_80684265_80684385_80687730_80687819_80690537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006110	chr12	-	1282	4	NNC	ENSMUSG00000021131.15	novel	1293	4	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCTTATTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	80691099	80680794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_80681302_80684263_80684385_80687726_80687819_80690537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006111	chr12	+	857	6	FSM	ENSMUSG00000048833.10	ENST00000557046.1	858	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAGGTTCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80691655	80726479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80722622_80722709_80723905_80724041_80726248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006112	chr12	+	774	5	ISM	ENSMUSG00000048833.10	ENST00000557046.1	858	6	17577	0	17577	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCAGGTTCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80709231	80726479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80709353_80713308_80713510_80722622_80722709_80723905_80724041_80726248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006113	chr12	+	691	2	ISM	ENSMUSG00000021133.10	ENSMUST00000220238.2	2127	7	83724	430	83675	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGAGGGCCTGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	80921007	80924217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80921351_80923869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006114	chr12	+	635	1	ISM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	89642	0	89642	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGATGTAGTCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	80926974	80927609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80927000_80927600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006115	chr12	+	1040	4	ISM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	2210	0	1222	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80994568	80997277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80994640_80995868_80995943_80996267_80996379_80996493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006116	chr12	+	888	3	ISM	ENSMUSG00000021134.18	ENST00000553635.5	1340	8	3479	23	2520	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGCCCATTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	80995866	80997191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_80995943_80996267_80996379_80996490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006117	chr12	+	858	2	NNC	ENSMUSG00000021134.18	novel	1491	8	NA	NA	2952	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80996298	80997277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_80996379_80996499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006118	chr12	+	788	1	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	3144	1	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGGTCTGTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	80996490	80997278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_80996500_80997300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006119	chr12	-	642	2	ISM	ENSMUSG00000079055.11	ENST00000534137.5	2821	6	113589	0	113589	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCGCCGGAACAAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	81249283	81246266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81246642_81249016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006120	chr12	-	649	2	ISM	ENSMUSG00000079055.11	ENST00000534137.5	2821	6	1296	14571	1296	-14571	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGATTCTTTTTAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	81361576	81260837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81260944_81361033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006121	chr12	-	668	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	81531884	81405799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006122	chr12	-	544	1	ISM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	61653	83	61653	-83	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTAAAGACTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	81518003	81517459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81517500_81518000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006123	chr12	-	546	2	ISM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	10473	1163	10426	226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAGATTTTCCCAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	81521421	81518640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81519126_81521360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006124	chr12	-	430	4	FSM	ENSMUSG00000091803.8	ENSMUST00000168463.8	431	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	81531886	81518866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_81518946_81521360_81521424_81527704_81527777_81531670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006125	chr12	-	140	1	Genic_Genomic	ENSMUSG00000090935.11	novel	NA	NA	NA	NA	13352	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAATGGTACATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	81544852	81544712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_81544700_81544900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006126	chr12	-	1416	1	ISM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	32354	1201	10873	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTTTTTGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	81547331	81545915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81545900_81547300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006127	chr12	-	170	2	ISM	ENSMUSG00000090935.11	ENSMUST00000169158.2	691	3	103	6607	103	-6607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCCAGGAGGGTGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	81579551	81557631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81557740_81579489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006128	chr12	-	178	1	ISM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	21272	0	21224	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTCCCTTGTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	81620508	81620330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81620300_81620500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006129	chr12	-	165	2	ISM	ENSMUSG00000002679.15	ENSMUST00000002756.14	1003	8	13048	6066	13048	-6066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTGTGGATGCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	81628684	81626404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81626460_81628574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006130	chr12	-	179	2	ISM	ENSMUSG00000002679.15	ENSMUST00000002756.14	1003	8	12234	8258	12234	-8258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGATCACGAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	81629498	81628596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81628684_81629406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006131	chr12	-	239	3	ISM	ENSMUSG00000002679.15	ENSMUST00000002756.14	1003	8	5884	8281	5884	-8281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAAGGATATTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81635848	81628619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81628684_81629406_81629490_81635756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006132	chr12	-	175	2	ISM	ENSMUSG00000002679.15	ENSMUST00000002756.14	1003	8	3622	15418	3622	-15418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAAGTACAAAACACCA	NA	NA	NA	NA	NA	NA	NA	NA	81638110	81635756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_81635849_81638027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006133	chr12	+	1466	1	ISM	ENSMUSG00000042734.7	ENSMUST00000218362.2	4754	4	34843	0	34723	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTATGTTGCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	81712865	81714331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_81712900_81714300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006134	chr12	+	670	2	ISM	ENSMUSG00000042700.17	ENST00000358550.6	6578	21	2427	92991	1112	-89850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCATTCGAAGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	82388650	82404053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_82389274_82404006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006135	chr12	+	549	4	ISM	ENSMUSG00000021222.10	ENST00000353777.7	801	6	44	18149	44	-1653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGGGACTGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	83576792	83586677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83576909_83580640_83580785_83586081_83586256_83586562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006136	chr12	+	819	4	ISM	ENSMUSG00000021222.10	ENST00000353777.7	801	6	3890	16304	3890	-167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCAATTCCCATCGACC	NA	NA	NA	NA	NA	NA	NA	NA	83580638	83588522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83580785_83586081_83586256_83586562_83586678_83588138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006137	chr12	+	491	4	ISM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	7736	1653	7736	-1653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGGGACTGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	83584484	83586677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83584589_83584717_83584816_83586081_83586256_83586562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006138	chr12	+	432	4	ISM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	7996	120	7996	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAACCTCCAAGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	83584744	83588210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83584816_83586081_83586256_83586562_83586678_83588138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006139	chr12	+	400	1	ISM	ENSMUSG00000021222.10	ENSMUST00000223291.2	2005	13	15518	3	11543	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAATTTTGCCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83588291	83588691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83588300_83588700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006140	chr12	-	1042	1	ISM	ENSMUSG00000042628.9	ENSMUST00000221919.2	4420	13	49224	291	49224	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	NA	NA	NA	NA	NA	NA	NA	83594664	83593622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_83593600_83594700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006141	chr12	+	826	2	ISM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	45601	845	45592	-845	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAACACACTGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	83724626	83729052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83724677_83728276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006142	chr12	+	838	1	Genic_Genomic	ENSMUSG00000010608.16	novel	NA	NA	NA	NA	50026	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTGTAGTGCATATAC	NA	NA	NA	NA	NA	NA	NA	NA	83729060	83729898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_83729100_83729900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006143	chr12	+	235	2	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	1	21619	1	-21619	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCATGTCATCATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83746339	83759226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83746426_83759077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006144	chr12	+	317	2	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	12817	19164	12817	-19164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGAGGCAGTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	83759155	83761681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83759329_83761537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006145	chr12	+	221	2	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	15198	11003	15198	-11003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTTTTGGTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83761536	83769842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83761680_83769764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006146	chr12	+	363	3	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	15232	9390	15232	-9390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGGCTCATCTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	83761570	83771455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83761680_83769764_83769833_83771269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006147	chr12	+	366	3	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	24973	5286	24973	-5286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGGAGCTTGTTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	83771311	83775559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83771491_83774999_83775099_83775471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006148	chr12	+	268	3	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	28699	2278	28699	-2278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTATATGCTGGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83775037	83778567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83775099_83775471_83775559_83778447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006149	chr12	+	822	3	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	42095	636	31093	492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCCACTTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	83777431	83781337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83777487_83778447_83778567_83780689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006150	chr12	+	157	1	ISM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	45764	1023	34351	1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGCAGTTAGAACATG	NA	NA	NA	NA	NA	NA	NA	NA	83780689	83780846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83780700_83780800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006151	chr12	+	946	1	ISM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	45691	0	34689	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTCAGTTCAGAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	83781027	83781973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_83781000_83782000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006152	chr12	-	1723	1	ISM	ENSMUSG00000021224.16	ENSMUST00000117217.8	3549	11	126141	37	46550	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	83842567	83840844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_83840800_83842600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006153	chr12	-	1760	2	ISM	ENSMUSG00000021224.16	ENSMUST00000129335.8	1962	10	45072	-969	45072	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAATTTCCTTATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	83844045	83841243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_83842929_83843970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006154	chr12	-	1152	4	ISM	ENSMUSG00000021224.16	ENST00000559312.5	1413	8	44091	0	30971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGACAGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83858146	83842209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_83842929_83850553_83850759_83854874_83855016_83858059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006155	chr12	-	615	3	ISM	ENSMUSG00000021224.16	ENST00000555738.6	1530	8	51475	463	38355	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTACAACCAGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	83850762	83842672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_83842929_83846281_83846432_83850553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006156	chr12	-	311	3	ISM	ENSMUSG00000021224.16	ENST00000555738.6	1530	8	47321	4158	34201	-4155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACGCCCTCTGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	83854916	83846367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_83846432_83850553_83850759_83854874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006157	chr12	-	315	4	ISM	ENSMUSG00000021224.16	ENSMUST00000154043.8	1929	9	10345	8524	10345	-8524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGTGCTTTTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	83878772	83850736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_83850759_83854874_83855016_83858059_83858135_83878695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006158	chr12	-	334	4	ISM	ENSMUSG00000021224.16	ENSMUST00000154043.8	1929	9	-18	12763	-18	-12763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCCAGATAGGAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	83889135	83854975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_83855016_83858059_83858135_83878695_83878771_83888991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006159	chr12	+	2269	1	FSM	ENSMUSG00000046791.9	ENSMUST00000053744.9	2344	1	76	-1	76	1	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTCTAAGCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	83997457	83999726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_83997500_83999700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006160	chr12	+	253	2	ISM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	2634	1321	2634	-1321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTGCTATGGCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84037268	84039326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84037471_84039275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006161	chr12	+	217	1	Genic_Genomic	ENSMUSG00000021226.8	novel	NA	NA	NA	NA	5800	4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTTGTCCTTCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	84040434	84040651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_84040400_84040700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006162	chr12	+	483	4	FSM	ENSMUSG00000042523.13	ENST00000554339.5	469	4	0	-14	0	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTTATCCCACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	84161148	84185317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_84161174_84182340_84182468_84183270_84183412_84185127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006163	chr12	+	450	3	NNC	ENSMUSG00000042523.13	novel	469	4	NA	NA	21174	9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCAGTGTTTATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	84182338	84185312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_84182468_84183275_84183412_84185127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006164	chr12	+	891	1	ISM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	29710	0	29536	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGACCACTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84361715	84362606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84361700_84362600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006165	chr12	+	987	3	ISM	ENSMUSG00000042472.12	ENST00000324593.10	2245	11	20549	0	7812	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84384386	84390498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84384516_84386875_84387004_84389768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006166	chr12	-	402	3	ISM	ENSMUSG00000021234.10	ENST00000555916.1	532	4	360	-1	360	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAGAAATTGCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	84395151	84385906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_84386067_84393568_84393710_84395050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006167	chr12	+	733	1	NIC	ENSMUSG00000042472.12	novel	2245	11	NA	NA	13191	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGCTCTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84389765	84390498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_84389800_84390500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006168	chr12	-	350	3	ISM	ENSMUSG00000021234.10	ENST00000555916.1	532	4	24	7660	24	-1477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGGTATTGGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	84395487	84393567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_84393710_84395050_84395151_84395379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006169	chr12	+	382	3	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	9	3366	9	-3366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGAAGATTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	84413666	84417160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84413794_84415359_84415484_84417029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006170	chr12	+	288	3	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	1778	2720	1778	-2720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCTTGAGCTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	84415435	84417806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84415484_84417029_84417161_84417697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006171	chr12	+	211	3	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	3461	2584	3461	-2584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTAAGTGATCCTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	84417118	84417942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84417161_84417697_84417806_84417881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006172	chr12	+	280	3	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	4039	2194	4039	-2194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACCCCTTGTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	84417696	84418332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84417806_84417881_84417945_84418224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006173	chr12	+	158	2	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	4214	2217	4214	-2217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGCCATCAACTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	84417871	84418309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84417945_84418224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006174	chr12	+	279	2	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	4566	1444	4566	-1444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTACGTCCGGCCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	84418223	84419082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84418333_84418912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006175	chr12	+	398	3	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	5315	963	5315	-963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACGAACGCAGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84418972	84419563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84419116_84419192_84419309_84419424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006176	chr12	+	243	2	ISM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	5765	0	5765	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCTTCCCAATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84419422	84420526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84419592_84420452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006177	chr12	+	1383	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCTGGTGTGATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84463969	84465352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_84464000_84465400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006178	chr12	+	261	1	ISM	ENSMUSG00000085793.3	ENSMUST00000137170.3	2270	6	79891	0	79891	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCCAGGTTTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84578086	84578347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_84578100_84578300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006179	chr12	-	833	1	Genic_Genomic	ENSMUSG00000021242.10	novel	NA	NA	NA	NA	17759	1	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCCTGGATGCCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	84802167	84801334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_84801300_84802200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006180	chr12	-	1469	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	1	1829	1	-1829	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTCTGTGGTTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	84819925	84803164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006181	chr12	-	787	2	ISM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	12251	2046	12251	-2046	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTATCCAGACTGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	84807675	84803381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_84803987_84807493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006182	chr12	+	880	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	6	-3	6	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	84820030	84821862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006183	chr12	-	411	1	ISM	ENSMUSG00000002020.16	ENSMUST00000002073.13	6769	36	92910	0	92857	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGTGCTTAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84830396	84829985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_84830000_84830400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006184	chr12	+	3702	1	FSM	ENSMUSG00000092130.3	ENSMUST00000220643.2	3987	1	285	0	285	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCCCTAGCTACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	84922827	84926529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_84922800_84926500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006185	chr12	-	1272	1	ISM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	51465	14	31718	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCTACAATAATAAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	84966209	84964937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_84964900_84966200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006186	chr12	-	1289	2	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	30352	1249	30352	-1249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGCTATATTGGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84967575	84966187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_84967355_84967453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006187	chr12	+	368	4	ISM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	3110	998	3110	-998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGCGTCCCTATCATG	NA	NA	NA	NA	NA	NA	NA	NA	85020864	85029067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_85021014_85026168_85026242_85027288_85027377_85029009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006188	chr12	+	392	4	ISM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	8414	-13	8414	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGTCTCAATTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	85026168	85030078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_85026242_85027288_85027377_85029009_85029105_85029942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006189	chr12	-	1079	3	FSM	ENSMUSG00000042320.18	ENST00000673765.1	1080	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCGGGACTGTTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	85142180	85134167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_85134329_85134683_85134879_85141457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006190	chr12	+	825	3	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	19651	873	19651	-873	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGGCAAAGAGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85177257	85179989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_85177318_85177670_85177839_85179392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006191	chr12	+	644	1	ISM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	22612	0	22612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCCGGGATCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	85180218	85180862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_85180200_85180900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006192	chr12	-	2043	7	FSM	ENSMUSG00000004791.8	ENSMUST00000223220.2	2080	7	37	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGGATGTATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	85224527	85213408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_85214189_85216131_85216192_85216284_85216315_85218148_85218229_85218433_85218631_85222529_85222570_85223671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006193	chr12	-	779	1	ISM	ENSMUSG00000004791.8	ENSMUST00000223220.2	2080	7	10376	1	9882	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTAGGATGTATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85214188	85213409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_85213400_85214200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006194	chr12	-	260	1	FSM	ENSMUSG00000113681.2	ENSMUST00000221330.2	292	1	37	-5	37	5	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCTTGTGACGTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	85234542	85234282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_85234300_85234500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006195	chr12	-	474	1	Genic_Genomic	ENSMUSG00000008822.16	novel	NA	NA	NA	NA	7214	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTCCCCCCCTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	85319643	85319169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_85319200_85319600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006196	chr12	-	571	2	FSM	ENSMUSG00000008822.16	ENST00000357971.7	567	2	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTACATTGCTTCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	85326860	85319177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_85319640_85326751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006197	chr12	-	472	2	NNC	ENSMUSG00000008822.16	novel	567	2	NA	NA	55	-27	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCTAACCAATAAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	85326802	85319209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_85319640_85326760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006198	chr12	-	289	2	FSM	ENSMUSG00000008822.16	ENSMUST00000117138.3	735	2	240	206	17	-68	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGAAACGAATCTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	85326840	85319388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_85319602_85326764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006199	chr12	+	1214	2	ISM	ENSMUSG00000045064.6	ENST00000674097.1	2419	3	56	7166	56	-731	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGACCGAGTGGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	85334511	85336948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_85335103_85336325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006200	chr12	-	583	2	NNC	ENSMUSG00000008822.16	novel	634	3	NA	NA	-1375	-9101	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCCCAGGAATGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	85336587	85334767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_85335105_85336341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006201	chr12	+	1674	2	FSM	ENSMUSG00000045064.6	ENST00000554763.2	1672	2	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACTGTATAATGAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	85336321	85344012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_85337159_85343175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006202	chr12	+	951	1	NIC	ENSMUSG00000045064.6	novel	4482	3	NA	NA	6847	7	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGCTGGTATCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	85343170	85344121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_85343200_85344100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006203	chr12	-	1270	2	NNC	ENSMUSG00000034290.10	novel	6055	23	NA	NA	39243	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTATGTGAACTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	85346760	85345340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_85345855_85346004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006204	chr12	-	829	1	NIC	ENSMUSG00000034290.10	novel	6055	23	NA	NA	39173	4	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTCAAGAGTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	85346830	85346001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_85346000_85346800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006205	chr12	-	1257	3	ISM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	33740	1523	33607	-1523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAGGTAACCCTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	85352396	85347810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_85348701_85350240_85350448_85352236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006206	chr12	-	362	1	ISM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	31698	0	30806	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTCCTTGTGTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	85389923	85389561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_85389600_85389900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006207	chr12	-	615	4	ISM	ENSMUSG00000021248.10	ENSMUST00000222585.2	619	5	19098	-166	19098	166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTATGGAAAGAAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	85401631	85389972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006208	chr12	-	605	4	ISM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	35	1517	35	-940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGAGGACCTTTCCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	85421586	85391078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_85391126_85397576_85397651_85401568_85401681_85421214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006209	chr12	+	1385	1	Genic_Genomic	ENSMUSG00000021250.14	novel	NA	NA	NA	NA	2000	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCTTGCTCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	85522663	85524048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_85522700_85524000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006210	chr12	+	831	4	FSM	ENSMUSG00000034271.17	ENST00000419727.6	830	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCCACTCCAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	85645927	85685974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_85646002_85654915_85655140_85678418_85678524_85685546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006211	chr12	-	349	1	Genic_Genomic	ENSMUSG00000021252.12	novel	NA	NA	NA	NA	8728	2	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTGTGTACTTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	85862568	85862219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_85862200_85862600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006212	chr12	-	512	3	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	4952	445	4952	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAACATGTATGTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	85866344	85862666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_85862968_85863089_85863209_85866252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006213	chr12	-	377	3	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	2272	864	2272	-864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCGGGCCACCCTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	85869024	85863085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_85863209_85866252_85866344_85868861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006214	chr12	+	580	2	ISM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	108313	113696	33891	44767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCCAGACCAGGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	85980055	85986286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_85980449_85986099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006215	chr12	+	684	4	ISM	ENSMUSG00000012609.20	ENST00000554510.5	2386	15	34043	16756	34043	-16756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACCAGCTCCACTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	85980207	86042880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_85980449_85986102_85986285_86003339_86003495_86042774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006216	chr12	+	519	1	ISM	ENSMUSG00000012609.20	ENSMUST00000040179.14	5081	34	228532	0	153851	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	86100015	86100534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_86100000_86100500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006217	chr12	-	1084	1	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	21213	0	21213	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGGACTCCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	86104602	86103518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_86103500_86104600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006218	chr12	-	1314	3	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	16839	209	16839	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGAAGCAGGTGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	86108976	86103727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_86104713_86105673_86105828_86108801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006219	chr12	-	1343	3	ISM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	414	12600	414	-12600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAACTCTTAGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	86125401	86116118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_86116251_86116520_86116685_86124354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006220	chr12	+	499	4	ISM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	78561	-4	78561	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCATTCTGTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	86207921	86209237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_86207996_86208225_86208302_86208760_86208824_86208951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006221	chr12	+	284	1	NIC	ENSMUSG00000007867.10	novel	783	9	NA	NA	79589	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	86208949	86209233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_86208900_86209200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006222	chr12	-	182	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	3916	0	3916	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCCTGAGTCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	86927656	86927474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_86927500_86927700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006223	chr12	+	128	1	Genic_Genomic	ENSMUSG00000034157.13	novel	NA	NA	NA	NA	12580	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTATTTGCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	87012010	87012138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_87012000_87012100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006224	chr12	-	585	1	ISM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	40457	0	40065	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTTGTGCTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	87154219	87153634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87153600_87154200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006225	chr12	-	358	2	ISM	ENSMUSG00000034126.6	ENST00000682247.1	2477	21	37400	-2	37400	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCCTGGACTTAACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	87156884	87155816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87156068_87156777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006226	chr12	+	325	4	ISM	ENSMUSG00000021033.12	ENST00000556627.5	585	7	2	2305	2	-2305	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCATTACTCTTACGA	NA	NA	NA	NA	NA	NA	NA	NA	87204666	87208327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_87204719_87205851_87205920_87206823_87206950_87208248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006227	chr12	+	330	4	ISM	ENSMUSG00000021033.12	ENST00000556627.5	585	7	1186	1763	1186	-1763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCCCAGCCCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	87205850	87208869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_87205920_87206823_87206950_87208248_87208328_87208813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006228	chr12	+	1041	5	ISM	ENSMUSG00000021033.12	ENST00000556627.5	585	7	2154	-573	2154	107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACCGGCTAATGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	87206818	87211205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006229	chr12	+	245	2	NNC	ENSMUSG00000021033.12	novel	540	7	NA	NA	4148	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTAGGCCCAGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	87208812	87210634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_87208871_87210447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006230	chr12	+	159	1	NIC	ENSMUSG00000021033.12	novel	1571	10	NA	NA	5811	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTAGGCCCAGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	87210475	87210634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_87210500_87210600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006231	chr12	+	755	1	Genic_Genomic	ENSMUSG00000021033.12	novel	NA	NA	NA	NA	6079	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTGTCATGGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	87210743	87211498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_87210700_87211500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006232	chr12	-	875	1	ISM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	33343	0	33343	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	87213885	87213010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87213000_87213900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006233	chr12	-	519	6	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	19114	0	19114	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCATTCTACACGTGA	NA	NA	NA	NA	NA	NA	NA	NA	87291657	87286507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006234	chr12	-	104	1	NIC	ENSMUSG00000021038.18	novel	2524	20	NA	NA	24160	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCATTCTACACGTGA	NA	NA	NA	NA	NA	NA	NA	NA	87286611	87286507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_87286500_87286600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006235	chr12	-	551	6	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	17732	1503	17732	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCTACCCTCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	87293039	87288010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006236	chr12	+	173	2	Antisense	novelGene_ENSMUSG00000021038.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAAGGCAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	87288710	87289348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_87288803_87289267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006237	chr12	-	289	3	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	14535	6392	14535	-6392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGGGAGTAAGAATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	87296236	87292899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87293038_87293592_87293669_87296161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006238	chr12	-	207	3	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	12177	9654	12177	-9654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATGGGAAAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87298594	87296161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87296236_87297250_87297279_87298489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006239	chr12	-	188	2	NNC	ENSMUSG00000021038.18	novel	1417	18	NA	NA	12186	-9654	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATGGGAAAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87298585	87296161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_87296236_87298471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006240	chr12	-	229	3	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	10737	11985	10737	-11985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAGAATTGGGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	87300034	87298492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87298593_87299408_87299443_87299939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006241	chr12	+	206	2	Antisense	novelGene_ENSMUSG00000021038.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCAGAGTAAGAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	87298501	87300031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_87298600_87299923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006242	chr12	-	218	3	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	7447	13430	7447	-13430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGAGGCTCACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	87303324	87299937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87300033_87301003_87301061_87303258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006243	chr12	-	213	3	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	3258	16750	3258	-16750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTACAGAATTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87307513	87303257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87303324_87304188_87304228_87307405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006244	chr12	-	226	3	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	4	17686	4	-17686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGTAAGCATCGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	87310767	87304193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87304228_87307405_87307509_87310678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006245	chr12	-	345	3	ISM	ENSMUSG00000021038.18	ENSMUST00000021426.10	2509	19	242	20203	-3	-19344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGCTGGGTAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	87310776	87305851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87305996_87307405_87307509_87310678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006246	chr12	-	365	3	ISM	ENSMUSG00000021038.18	ENST00000556412.4	1782	20	48	20905	41	-20905	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAAGTAAGCTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	87312942	87307412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87307509_87310678_87310772_87312766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006247	chr12	+	882	6	ISM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	3637	-1	3637	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTTACAATCTATG	NA	NA	NA	NA	NA	NA	NA	NA	87317108	87320754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006248	chr12	-	292	1	Genic_Genomic	ENSMUSG00000021036.11	novel	NA	NA	NA	NA	83010	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTATTCATTCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	87352119	87351827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_87351800_87352100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006249	chr12	-	444	3	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	74197	4757	74197	-4757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCACTTCATGTGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	87360932	87356588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87356795_87359471_87359602_87360824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006250	chr12	-	371	3	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	45689	30973	45689	-30973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTTTTCAGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	87389440	87382804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87382933_87388310_87388531_87389417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006251	chr12	-	292	3	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	32757	41650	32757	-41650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTAGTCTAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	87402372	87393481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87393576_87397034_87397160_87402299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006252	chr12	-	323	2	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	19228	51519	19228	-51519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCATGACTATAACTG	NA	NA	NA	NA	NA	NA	NA	NA	87415901	87403350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87403477_87415704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006253	chr12	-	322	2	ISM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	169	63887	169	-63887	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAACAAAAGGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	87434960	87415718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87415900_87434819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006254	chr12	-	3084	1	ISM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	14587	0	14587	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87476022	87472938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87472900_87476000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006255	chr12	-	3299	2	ISM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	12243	0	12243	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87478366	87472938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87476041_87478169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006256	chr12	-	272	1	FSM	ENSMUSG00000079036.11	ENSMUST00000185301.2	408	1	136	0	57	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGACCAGCTGCCTCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	87490552	87490280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_87490300_87490600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006257	chr12	+	802	3	FSM	ENSMUSG00000021040.16	ENSMUST00000160488.8	802	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACGTTTTTATTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87490681	87496690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_87490797_87494333_87494393_87496062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006258	chr12	+	860	3	ISM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	3668	1710	3652	576	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTTTTAAGAGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87494333	87497266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_87494393_87496062_87496171_87496573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006259	chr12	-	1276	5	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	16597	-2	16597	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTATTTAGTGGACG	NA	NA	NA	NA	NA	NA	NA	NA	87502447	87496677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006260	chr12	+	729	1	Genic_Genomic	ENSMUSG00000021040.16	novel	NA	NA	NA	NA	7586	20	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCCCCAAACCCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	87498267	87498996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_87498300_87499000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006261	chr12	+	185	1	ISM	ENSMUSG00000079034.3	ENSMUST00000110152.3	1873	2	3766	0	3766	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGCAGTCTGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	87564851	87565036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_87564900_87565000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006262	chr12	+	1685	2	FSM	ENSMUSG00000079031.2	ENSMUST00000110149.2	1851	2	151	15	151	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACATGACTCCTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87783497	87787431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_87783537_87785785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006263	chr12	+	1674	1	Genic_Genomic	ENSMUSG00000079031.2	novel	NA	NA	NA	NA	2437	11	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATGCAGTCTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	87785783	87787457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_87785800_87787500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006264	chr12	+	1748	2	FSM	ENSMUSG00000072905.6	ENSMUST00000110147.3	1766	2	23	-5	23	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTTCTTTTTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	87840864	87844634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_87841033_87843054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006265	chr12	-	1859	2	FSM	ENSMUSG00000079029.3	ENSMUST00000101168.4	1840	2	0	-19	0	19	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTCTGATGGTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	88241270	88237390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_88239059_88241079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006266	chr12	+	1009	7	FSM	ENSMUSG00000021044.16	ENST00000341211.5	1012	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAACCCTTTCCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	88335109	88423705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_88335251_88338464_88338549_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006267	chr12	+	1102	3	ISM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	95843	-1	88395	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGACTGTTCCTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88423501	88428489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_88423705_88425779_88425974_88427784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006268	chr12	-	468	1	ISM	ENSMUSG00000007682.8	ENSMUST00000082432.6	5815	2	8630	4789	8476	1	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCTATTATTTCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	90696582	90696114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_90696100_90696600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006269	chr12	-	503	2	FSM	ENSMUSG00000007682.8	ENST00000557125.1	504	2	1	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATCTATTATTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	90705057	90696115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_90696572_90705010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006270	chr12	-	919	1	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	33829	0	33829	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATTTTGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	91522954	91522035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_91522000_91523000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006271	chr12	-	967	3	ISM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	22759	476	22281	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGTAAGATTTAAAGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	91534502	91525937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_91526626_91529682_91529773_91534313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006272	chr12	+	2556	2	FSM	ENSMUSG00000047414.7	ENST00000554746.1	3241	2	31	654	31	-290	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACATGAGATACTGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	95659165	95747591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_95659411_95745280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006273	chr12	+	1282	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	87	1854	87	-1854	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCATCTCGCGGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	95662217	95746027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_95662753_95745280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006274	chr12	+	2542	1	ISM	ENSMUSG00000047414.7	ENSMUST00000057324.4	7099	2	86704	3744	83573	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGCCTACTTGACCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	95745703	95748245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_95745700_95748200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006275	chr12	-	620	1	FSM	ENSMUSG00000043483.5	ENSMUST00000052882.5	636	1	179	-163	179	163	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTATGTTGAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	96889653	96889033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_96889000_96889700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006276	chr12	+	416	2	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	9993	28057	9993	-28057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCACTTAAACAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	98723293	98725016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_98723464_98724770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006277	chr12	+	650	5	ISM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	11743	12495	11743	-12495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTAGTGTTTCCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	98725043	98740578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006278	chr12	+	302	3	ISM	ENSMUSG00000021012.17	ENST00000557607.5	1935	13	36537	1452	12557	-1444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGAAAATGGAATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	98749837	98751629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_98749962_98751174_98751312_98751588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006279	chr12	+	302	2	ISM	ENSMUSG00000021012.17	ENSMUST00000021399.9	1430	7	14613	78	14613	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTTCGTTTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	98751893	98753028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_98752001_98752833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006280	chr12	+	252	1	NIC	ENSMUSG00000021012.17	novel	3146	15	NA	NA	15550	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAACATTTGCGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	98752830	98753082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_98752800_98753100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006281	chr12	+	641	1	ISM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	40149	0	16091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	98753371	98754012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_98753400_98754000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006282	chr12	-	1160	1	ISM	ENSMUSG00000033713.13	ENSMUST00000046859.12	7705	6	202560	0	197665	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTGTGTTGTGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	99157496	99156336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_99156300_99157500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006283	chr12	-	1703	6	FSM	ENSMUSG00000033713.13	ENST00000325117.8	1435	6	295	-563	295	563	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCCTGGCATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	99354866	99161966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006284	chr12	-	248	1	ISM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	165663	0	165663	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATATTTATGGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	99684038	99683790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_99683800_99684000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006285	chr12	-	207	2	ISM	ENSMUSG00000021176.7	ENSMUST00000223114.2	1122	7	28758	135935	27788	-135935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACAGATGCTAAGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	99821913	99820869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_99820960_99821796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006286	chr12	+	225	2	ISM	ENSMUSG00000021178.10	ENST00000536820.1	1249	9	1	8204	1	-8204	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGGAGAAGGTTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	100079312	100081222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100079412_100081096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006287	chr12	+	259	2	ISM	ENSMUSG00000021178.10	ENST00000536820.1	1249	9	1783	7616	1783	-7616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAGACAAGGATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	100081094	100081810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100081222_100081678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006288	chr12	+	278	2	ISM	ENSMUSG00000021178.10	ENST00000495689.1	1266	9	1784	7618	1784	-7593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGGCTGCTCCGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100081095	100081833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100081222_100081681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006289	chr12	+	409	3	ISM	ENSMUSG00000021178.10	ENST00000495689.1	1266	9	2374	6393	2374	-6368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGCTGAACATTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	100081685	100083058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100081865_100082045_100082175_100082957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006290	chr12	+	363	3	ISM	ENSMUSG00000021178.10	ENST00000495689.1	1266	9	2787	3930	2787	-3905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTCACCCTGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	100082098	100085521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100082175_100082957_100083055_100085331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006291	chr12	+	332	2	ISM	ENSMUSG00000021178.10	ENST00000536820.1	1249	9	6031	3028	6031	-3028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTCCTTCTGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	100085342	100086398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100085522_100086245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006292	chr12	+	314	2	ISM	ENSMUSG00000021178.10	ENST00000536820.1	1249	9	6927	2020	6927	-2020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGACTGGGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	100086238	100087406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100086398_100087251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006293	chr12	+	294	2	ISM	ENSMUSG00000021178.10	ENST00000495689.1	1266	9	7936	0	7936	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCACAGTCGTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	100087247	100089451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100087407_100089316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006294	chr12	+	142	1	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	9999	1	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCACAGTCGTCCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	100089310	100089452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_100089300_100089500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006295	chr12	-	142	1	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	25599	2	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGGCCAGCCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	100091996	100091854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_100091900_100092000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006296	chr12	-	347	3	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	21901	0	21901	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTGGGCCAGCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	100095694	100091856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100091991_100092459_100092532_100095553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006297	chr12	-	298	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	20822	3695	20822	-3695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAATTTTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	100096773	100095551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100095693_100096616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006298	chr12	-	244	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	19083	5545	19083	-5545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTCGGTAACACAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100098512	100097401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100097543_100098409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006299	chr12	-	306	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	16843	6775	16843	-6775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTTATGATGAAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	100100752	100098631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100098797_100100611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006300	chr12	-	256	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	13555	8803	13555	-8803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAGCAAACGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100104040	100100659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100100792_100103916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006301	chr12	-	256	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	11197	12060	11197	-12060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTTCAGAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	100106398	100103916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100104038_100106263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006302	chr12	-	272	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	9290	14423	9290	-14423	internal_fragment	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTACTAAAGTACAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	100108305	100106279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100106398_100108151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006303	chr12	-	672	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	7277	16350	7277	-16350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCAGCATGCTATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	100110318	100108206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100108558_100109997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006304	chr12	-	163	2	NNC	ENSMUSG00000021179.9	novel	3454	13	NA	NA	7518	-16612	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGGCTGTGCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	100110077	100108468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_100108552_100109997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006305	chr12	-	316	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	5307	18436	5307	-18436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCAGTAACCCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	100112288	100110292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100110449_100112128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006306	chr12	-	290	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	1389	20272	1389	-20272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCATTGTAGTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	100116206	100112128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100112288_100116075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006307	chr12	-	228	2	ISM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	1	24335	1	-24335	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGAGGAGGCACGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	100117594	100116191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_100116310_100117484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006308	chr12	+	697	5	ISM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	3	3581	3	-556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGCTAAGTGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	100165696	100172492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006309	chr12	+	508	3	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	32	-1096	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGCCTTCCGAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100165725	100171952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_100165976_100169800_100169978_100171871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006310	chr12	+	644	4	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	46	-561	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGTAAAGGCTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100165739	100172487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_100166002_100169833_100169978_100171871_100171979_100172356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006311	chr12	+	488	3	NNC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	-30	-1068	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGCACACTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100165757	100171980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_100165993_100169833_100169978_100171871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006312	chr12	+	540	4	ISM	ENSMUSG00000001175.17	ENST00000447653.8	1070	6	0	1074	0	-1074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTAATCTTGCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	100165787	100171974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100166050_100168651_100168683_100169833_100169978_100171871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006313	chr12	+	361	2	NNC	ENSMUSG00000001175.17	novel	1070	6	NA	NA	7	-3126	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACCCAACAGAAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	100165794	100169922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_100166067_100169833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006314	chr12	+	502	3	NNC	ENSMUSG00000001175.17	novel	1070	6	NA	NA	45	-1069	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGCACACTGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	100165832	100171979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_100166050_100169800_100169978_100171871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006315	chr12	+	3826	5	ISM	ENSMUSG00000001175.17	ENSMUST00000001204.8	3987	6	2248	0	2248	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTCTTAACTGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	100168650	100176065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006316	chr12	+	541	2	ISM	ENSMUSG00000001175.17	ENST00000447653.8	1070	6	6552	2	5937	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAACTGAAAAATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	100172339	100173046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100172493_100172658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006317	chr12	+	392	1	ISM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	6996	2992	6287	33	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATGGCTTCTAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	100172689	100173081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100172700_100173100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006318	chr12	+	560	1	Genic_Genomic	ENSMUSG00000001175.17	novel	NA	NA	NA	NA	9116	5	mono-exon	FALSE	NA	NA	NA	NA	NA	572	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTGTGTAGGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100175518	100176078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_100175500_100176100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006319	chr12	+	1471	2	ISM	ENSMUSG00000021185.17	ENSMUST00000167322.2	2941	14	80961	-273	80961	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGACTACAATACTATT	NA	NA	NA	NA	NA	NA	NA	NA	100833361	100838880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_100833515_100837562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006320	chr12	-	675	1	ISM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	42948	632	42918	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCATTTGTGTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	101006974	101006299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_101006300_101007000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006321	chr12	-	997	3	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	41022	124	41022	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAGAATAAAGTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101008870	101006425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_101007039_101008083_101008311_101008713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006322	chr12	-	654	4	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	33824	2412	33824	-2412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGTTGAAACAAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	101016068	101008713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_101008905_101009701_101009845_101010748_101010919_101015918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006323	chr12	-	668	2	ISM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	279	28608	279	-28608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAGAAACAACAGGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	101049613	101034909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_101034952_101048987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006324	chr12	-	415	1	FSM	ENSMUSG00000113178.2	ENSMUST00000222174.2	421	1	306	-300	306	300	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACTATGAAGCAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101188370	101187955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_101188000_101188400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006325	chr12	-	529	1	Genic_Genomic	ENSMUSG00000021186.10	novel	NA	NA	NA	NA	71379	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGGCATGTAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	101713348	101712819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_101712800_101713300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006326	chr12	-	929	5	ISM	ENSMUSG00000021189.12	ENST00000502250.5	1132	8	20713	-1	10968	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCATTGGGGGTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101903730	101889036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_101889461_101892742_101892841_101899218_101899324_101900506_101900674_101903595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006327	chr12	-	874	5	NIC	ENSMUSG00000021189.12	novel	1132	8	NA	NA	11026	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCATTGGGGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	101903672	101889037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_101889461_101892742_101892841_101899214_101899324_101900506_101900674_101903595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006328	chr12	-	798	4	NIC	ENSMUSG00000021189.12	novel	1132	8	NA	NA	14023	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCATTGGGGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	101900675	101889037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_101889464_101892742_101892841_101899218_101899324_101900506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006329	chr12	-	789	4	NNC	ENSMUSG00000021189.12	novel	1132	8	NA	NA	14023	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTGCATTGGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	101900675	101889040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_101889461_101892742_101892841_101899221_101899324_101900506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006330	chr12	-	490	3	NNC	ENSMUSG00000021189.12	novel	1092	9	NA	NA	15377	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTAAATGTCCCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101899321	101889168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_101889461_101892742_101892834_101899214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006331	chr12	-	594	6	ISM	ENSMUSG00000021189.12	ENSMUST00000161011.8	1000	9	12359	51	2555	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAAAAGTAAAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	101912143	101899235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006332	chr12	-	858	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	-327	-20	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGATTCTTTTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	101942513	101934348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_101934470_101935751_101935894_101941918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006333	chr12	-	867	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	-6	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGATTCTTTTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	101942519	101934348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_101934470_101935751_101935897_101941918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006334	chr12	+	1264	2	ISM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	26647	2160	26647	-2160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTTGTAAATGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101968893	101970523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_101969022_101969387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006335	chr12	+	1093	1	Genic_Genomic	ENSMUSG00000041781.10	novel	NA	NA	NA	NA	29345	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTTTCTTGTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	101971591	101972684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_101971600_101972700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006336	chr12	-	958	4	ISM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	25387	10	25387	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCTGGACTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	102364641	102360352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006337	chr12	+	774	2	ISM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	17	25346	17	-25346	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGGTAGTCAATCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	102435410	102438818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_102435623_102438256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006338	chr12	+	1005	3	ISM	ENSMUSG00000021192.17	ENSMUST00000021609.10	3390	13	2817	21518	2817	-21516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCAACTCTGCTAATAC	NA	NA	NA	NA	NA	NA	NA	NA	102438267	102442648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_102438825_102440804_102441033_102442428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006339	chr12	-	1136	1	ISM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	15805	0	15805	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATCTTTGTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	102709126	102707990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_102708000_102709100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006340	chr12	-	2159	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	30	606	30	-606	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGCCCAGCCCCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	102724901	102708596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_102709654_102723799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006341	chr12	+	3372	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCCATTGTCATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	102710019	102713824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_102710426_102710858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006342	chr12	+	3361	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCGTGCCATTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	102710025	102713821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_102710430_102710864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006343	chr12	-	3345	2	Antisense	novelGene_ENSMUSG00000046675.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCACCTTCCTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	102713821	102710037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_-_102710424_102710862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006344	chr12	-	1155	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	-3	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102724062	102719533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_102720426_102723799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006345	chr12	+	633	1	ISM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	19108	0	19108	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	102743333	102743966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_102743300_102744000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006346	chr12	+	1472	3	ISM	ENSMUSG00000021198.17	ENSMUST00000085079.11	7762	47	106321	70757	106321	-70372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGCCTGTATCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103074468	103079500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_103074558_103074874_103075038_103078280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006347	chr12	+	1101	2	FSM	ENSMUSG00000096753.8	ENST00000556222.1	1151	2	1	49	1	-49	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCAGCCATGCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	103281128	103282926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_103281334_103282030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006348	chr12	+	925	1	ISM	ENSMUSG00000096753.8	ENSMUST00000191218.7	1419	2	4818	348	834	1	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACACCCTCAGCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	103282051	103282976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_103282100_103283000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006349	chr12	-	1158	3	ISM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	6375	7660	6331	-7660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAAGTCTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	103385708	103383536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_103384053_103384322_103384477_103385220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006350	chr12	-	1372	3	ISM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	1226	8477	1182	-8477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCATTTGAGTAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	103390857	103384353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_103384477_103385220_103385743_103390130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006351	chr12	+	481	3	ISM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	3415	-1	3415	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATTGTTCCCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103403932	103406499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_103403965_103405659_103405822_103406212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006352	chr12	-	220	1	NIC	ENSMUSG00000079017.4	novel	463	4	NA	NA	1294	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGTGGTGGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103408645	103408425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_103408400_103408600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006353	chr12	-	275	2	ISM	ENSMUSG00000079017.4	ENSMUST00000055071.9	463	4	776	15	776	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGTGTTCCTAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	103409163	103408440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_103408643_103409090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006354	chr12	+	658	5	FSM	ENSMUSG00000021209.13	ENST00000328839.3	658	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTGTTTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	103498748	103539686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_103499002_103500329_103500404_103524626_103524730_103539343_103539420_103539534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006355	chr12	-	1109	4	FSM	ENSMUSG00000090555.2	ENSMUST00000172146.2	1242	4	-8	141	-8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCTACAGTCTTACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	103788510	103784255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_103784307_103785107_103785259_103786143_103786415_103787874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006356	chr12	-	823	3	ISM	ENSMUSG00000090555.2	ENST00000636712.1	1181	5	5	2039	5	-2039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCACGCTGTCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	103794301	103786295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_103786415_103787874_103788507_103794229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006357	chr12	-	283	1	NIC	ENSMUSG00000041415.11	novel	9851	27	NA	NA	55405	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGCCACTCTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	104662806	104662523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_104662500_104662800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006358	chr12	-	297	2	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	51441	732	51439	-732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCATGGGCTCGGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	104666772	104663255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_104663404_104666623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006359	chr12	-	348	2	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	47751	6708	47749	-6708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCTAAGCTCCAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	104670462	104669231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_104669442_104670324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006360	chr12	-	300	2	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	45625	8788	45623	-8788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGCCACAGACATGAT	NA	NA	NA	NA	NA	NA	NA	NA	104672588	104671311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_104671495_104672471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006361	chr12	-	304	3	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	41216	12537	41214	-12537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGACGGCAGTGCTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	104676997	104675060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_104675175_104676043_104676120_104676883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006362	chr12	-	300	2	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	38808	15923	38806	-15923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGGTGAGGGAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	104679405	104678446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_104678595_104679253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006363	chr12	-	314	2	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	37049	16791	37047	-16791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATACAGACAAGATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	104681164	104679314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_104679497_104681032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006364	chr12	-	333	2	ISM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	29750	18543	29748	-18543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATGGAGGCGGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	104688463	104681066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_104681166_104688229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006365	chr12	-	1035	1	FSM	ENSMUSG00000100975.3	ENSMUST00000185486.3	1189	1	156	-2	156	2	mono-exon	FALSE	NA	NA	NA	NA	NA	730	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGGTTTCGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	104892792	104891757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_104891800_104892800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006366	chr12	+	460	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	69	2396	69	1889	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTGGTGGTGCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104999017	105006769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_104999242_105006533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006367	chr12	+	282	1	Genic_Genomic	ENSMUSG00000021102.5	novel	NA	NA	NA	NA	9937	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACACCCCCAGCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	105008885	105009167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_105008900_105009200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006368	chr12	+	666	1	FSM	ENSMUSG00000041347.6	ENSMUST00000041229.5	1338	1	672	0	672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGATTAGGCTGATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	105571021	105571687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_105571000_105571700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006369	chr12	+	1494	2	ISM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	13330	1155	13330	-1155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTACAGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	105664972	105668127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105665236_105666896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006370	chr12	+	1263	1	ISM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	16377	0	16377	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGCATAAAGCAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	105668019	105669282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105668000_105669300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006371	chr12	+	371	2	ISM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	-63	9909	0	-9909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAGAGGAACTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	105750952	105766059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105751174_105765909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006372	chr12	+	144	2	ISM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	14991	8959	14876	-8959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGTGGTAACACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	105766006	105767009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105766084_105766942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006373	chr12	+	189	2	ISM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	20174	3112	20059	-3112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTACATATTGGGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	105771189	105772856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105771268_105772745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006374	chr12	+	145	2	ISM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	22408	1064	22293	-1064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCATAAGAAGCCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	105773423	105774904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105773478_105774813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006375	chr12	+	376	4	ISM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	24641	22544	24473	2640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGTTTCAACACGGATG	NA	NA	NA	NA	NA	NA	NA	NA	105775603	105778608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105775692_105775782_105775922_105777295_105777369_105778532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006376	chr12	+	140	1	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	24698	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTTATTTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	105775828	105775968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_105775800_105776000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006377	chr12	+	370	3	ISM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	38850	6510	38682	-6510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTTGGCCTGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	105789812	105794642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105789937_105793202_105793346_105794539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006378	chr12	+	480	4	ISM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	44554	1731	44376	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGTTAGCGACAG	NA	NA	NA	NA	NA	NA	NA	NA	105795506	105803335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105795537_105799358_105799422_105800968_105801044_105803023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006379	chr12	+	359	1	ISM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	53755	0	53577	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAAGTAGTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	105804707	105805066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105804700_105805100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006380	chr12	+	339	3	ISM	ENSMUSG00000021115.16	ENST00000557352.2	1096	10	1	11778	1	-11778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAAGCACGCTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	105976567	106017270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_105976618_106002798_106002964_106017146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006381	chr12	+	480	4	ISM	ENSMUSG00000021115.16	ENST00000680007.1	1369	12	2	19235	0	-6879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGAGCTATGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	106002797	106022169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006382	chr12	+	386	4	ISM	ENSMUSG00000021115.16	ENST00000680007.1	1369	12	14375	19029	14372	-6673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGAACTGCAGCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	106017170	106022375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_106017264_106018018_106018107_106022060_106022170_106022279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006383	chr12	+	423	4	ISM	ENSMUSG00000021115.16	ENST00000680007.1	1369	12	15223	17170	15220	-4814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCCACAGTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	106018018	106024234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_106018107_106022060_106022170_106022279_106022373_106024101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006384	chr12	+	390	4	ISM	ENSMUSG00000021115.16	ENST00000680007.1	1369	12	19332	16448	19329	-4092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGCCAACTTACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	106022127	106024956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_106022170_106022279_106022373_106024101_106024235_106024834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006385	chr12	+	480	4	ISM	ENSMUSG00000021115.16	ENST00000680007.1	1369	12	21304	12351	21301	5	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGCCTCAAAGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	106024099	106029053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_106024235_106024834_106024956_106025876_106025936_106028888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006386	chr12	+	276	3	NNC	ENSMUSG00000021115.16	novel	1096	10	NA	NA	22094	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGACCAGCCTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106024892	106029048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_106024956_106025882_106025936_106028888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006387	chr12	+	162	1	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	26088	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGACCAGCCTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106028886	106029048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_106028900_106029000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006388	chr12	+	1563	1	ISM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	65572	0	39324	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTATTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	106042122	106043685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_106042100_106043700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006389	chr12	-	950	1	Genic_Genomic	ENSMUSG00000056770.16	novel	NA	NA	NA	NA	71839	3	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTCCTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108073636	108072686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_108072700_108073600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006390	chr12	-	1172	3	ISM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	68007	323	67909	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGGTGGCAACCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	108077566	108073012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_108073938_108074815_108074977_108077480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006391	chr12	+	277	2	ISM	ENSMUSG00000021258.11	ENST00000389879.9	2169	12	23	17373	23	-16753	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCACACGTTTGGGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	108146091	108152863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108146140_108152634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006392	chr12	+	442	3	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	6663	14157	6591	-14155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAGCTTCCTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108152659	108155461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108152882_108153437_108153520_108155323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006393	chr12	+	278	3	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	9327	8978	9255	-8976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTGTAAATGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	108155323	108160640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108155456_108159930_108160037_108160600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006394	chr12	+	284	3	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	13985	8122	13913	-8120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTGTGCCGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108159981	108161496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108160037_108160600_108160659_108161325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006395	chr12	+	393	2	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	15326	7557	15254	-7555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCATCCCCTCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	108161322	108162061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108161496_108161841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006396	chr12	+	545	4	ISM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	15885	1077	15813	-1075	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTATCAGAGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108161881	108168541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108162111_108162597_108162632_108165567_108165643_108168334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006397	chr12	+	245	3	NNC	ENSMUSG00000021258.11	novel	2627	11	NA	NA	15903	-3974	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGCCTGCTGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	108161971	108165642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_108162108_108162597_108162632_108165567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006398	chr12	+	342	2	ISM	ENSMUSG00000021258.11	ENST00000389879.9	2169	12	22566	283	22566	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACCACACTATCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108168634	108169953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108168848_108169824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006399	chr12	-	246	2	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	71444	1139	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGAATGGTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	108169948	108168721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_108168849_108169829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006400	chr12	+	257	1	Genic_Genomic	ENSMUSG00000021258.11	novel	NA	NA	NA	NA	23927	16	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTAGTATGTATCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	108169995	108170252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_108170000_108170300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006401	chr12	+	2491	1	Genic_Genomic	ENSMUSG00000021260.9	novel	NA	NA	NA	NA	22110	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGGTCATGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	108294638	108297129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_108294600_108297100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006402	chr12	+	239	1	ISM	ENSMUSG00000021259.6	ENSMUST00000021684.6	2118	15	27615	0	27261	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTACGGCCACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	108328254	108328493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108328300_108328500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006403	chr12	+	217	2	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	86273	29318	86273	-28146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGTTTCCTCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	108475347	108476505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108475495_108476435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006404	chr12	+	265	3	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	89032	25102	89032	-23930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGACCCTAGAAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	108478106	108480721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108478191_108479233_108479330_108480636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006405	chr12	+	257	2	ISM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	92300	22948	92300	-21776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACAGCGTGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	108481374	108482875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_108481475_108482718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006406	chr12	-	601	5	FSM	ENSMUSG00000097788.3	ENSMUST00000180576.3	604	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACACTCCTGGAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	108521874	108503602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_108503783_108505512_108505566_108505656_108505730_108506839_108506898_108521637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006407	chr12	+	244	1	Genic_Genomic	ENSMUSG00000058070.15	novel	NA	NA	NA	NA	116517	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGTTTCTGAAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	108505591	108505835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_108505600_108505800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006408	chr12	+	651	5	FSM	ENSMUSG00000021264.13	ENST00000427625.1	659	5	13	-5	13	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGAAGACCTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	108759939	108781584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_108760022_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006409	chr12	-	1616	1	ISM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	8395	0	8395	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGCTCCTCTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	108793414	108791798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_108791800_108793400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006410	chr12	-	1857	4	FSM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	119	0	119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGCTCCTCTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	108801690	108791798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_108793415_108793599_108793684_108797122_108797167_108801577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006411	chr12	-	1773	4	NNC	ENSMUSG00000021265.4	novel	1976	4	NA	NA	123	-78	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCCTGGGCGGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	108801686	108791876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_108793415_108793601_108793684_108797122_108797167_108801577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006412	chr12	-	1826	3	ISM	ENSMUSG00000021266.17	ENST00000344102.9	1318	8	16609	-1236	16609	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108832226	108825955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_108827353_108828728_108828870_108831938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006413	chr12	-	1399	1	NIC	ENSMUSG00000021266.17	novel	2764	10	NA	NA	21481	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108827354	108825955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_108826000_108827400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006414	chr12	-	676	4	ISM	ENSMUSG00000021266.17	ENST00000344102.9	1318	8	7613	1574	7613	-1574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGAAGATGACGACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	108841222	108828765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_108828870_108831938_108832226_108833602_108833700_108841034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006415	chr12	-	564	4	ISM	ENSMUSG00000021266.17	ENST00000344102.9	1318	8	66	13845	66	-13845	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAACGTTTAGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108848769	108841036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_108841223_108841591_108841712_108846968_108847078_108848620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006416	chr12	-	766	3	ISM	ENSMUSG00000021266.17	ENST00000355338.6	1931	10	2	21489	2	-21489	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCATGGACGGTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	108860446	108848680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_108848835_108854301_108854475_108860007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006417	chr12	+	957	2	FSM	ENSMUSG00000040877.17	ENST00000554175.5	936	2	-2	-19	-2	19	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCAGTGGCTCTTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	108860333	108864670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_108860455_108863834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006418	chr12	-	933	2	NNC	ENSMUSG00000021266.17	novel	1931	10	NA	NA	-4203	-33144	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGAGCCCGGCGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	108864651	108860335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_108860446_108863828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006419	chr12	-	937	2	NNC	ENSMUSG00000021266.17	novel	1931	10	NA	NA	-4203	-33145	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCTGAGCCCGGCGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	108864651	108860336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_108860465_108863842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006420	chr12	+	900	2	NNC	ENSMUSG00000040877.17	novel	936	2	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAAGACAAGGGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	108860363	108864650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_108860448_108863834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006421	chr12	+	821	1	NIC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	3499	4	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGGGAAAACAACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	108863834	108864655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_108863800_108864700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006422	chr12	+	1246	5	FSM	ENSMUSG00000021268.18	ENST00000398518.6	1270	5	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCGCAATGTGCTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	109510068	109538086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_109510626_109512312_109512426_109513375_109513539_109524603_109524755_109537824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006423	chr12	+	143	1	NIC	ENSMUSG00000021268.18	novel	1270	5	NA	NA	1045	1	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGGGGTAGGGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	109513372	109513515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_109513400_109513500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006424	chr12	-	172	2	ISM	ENSMUSG00000113868.2	ENSMUST00000222231.2	382	3	7771	0	7771	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATTAAATGGCTTCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	110045086	110013119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110013258_110045052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006425	chr12	-	153	1	FSM	ENSMUSG00000080356.3	ENSMUST00000116706.3	82	1	-1	-70	-1	70	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTCAACAGGGAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	110244564	110244411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_110244400_110244600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006426	chr12	-	278	1	NIC	ENSMUSG00000113585.2	novel	1084	4	NA	NA	7433	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTACAATAAGATGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	110443108	110442830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_110442800_110443100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006427	chr12	+	1163	4	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	75560	231	75439	-231	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCCTTGTTGCGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	110527731	110537891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_110527903_110534161_110534290_110535387_110535490_110537129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006428	chr12	+	915	2	ISM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	84971	1806	84851	396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGGAATGACGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110537143	110547690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_110537203_110546834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006429	chr12	+	779	1	ISM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	85172	0	85051	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	110537343	110538122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_110537300_110538100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006430	chr12	+	894	1	ISM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	96430	0	96310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	110548602	110549496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_110548600_110549500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006431	chr12	+	366	3	ISM	ENSMUSG00000018707.14	ENST00000644881.2	14073	77	60128	3882	60128	-3882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGACAATGAGTTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	110628164	110629354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_110628281_110628951_110629123_110629275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006432	chr12	-	426	1	Genic_Genomic	ENSMUSG00000021270.14	novel	NA	NA	NA	NA	5264	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTGGGTTGTAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	110657459	110657033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_110657000_110657500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006433	chr12	-	1017	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	3421	204	3421	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAATTCTGCATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	110659302	110657665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110658084_110658547_110658882_110659037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006434	chr12	-	539	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	3120	1300	3120	-1300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTACATGGCAGCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	110659603	110658761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110658882_110659037_110659307_110659453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006435	chr12	-	769	4	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	2420	1574	2420	-1574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAATGGTTACACATCA	NA	NA	NA	NA	NA	NA	NA	NA	110660303	110659035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110659307_110659453_110659602_110659745_110659937_110660144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006436	chr12	-	655	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	1946	2307	1946	-2307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGTTCTCAAAAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	110660777	110659768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110659937_110660144_110660311_110660456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006437	chr12	-	520	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	1582	2787	1582	-2787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGATCTGTTTGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	110661141	110660248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110660311_110660456_110660778_110661004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006438	chr12	-	780	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	871	3037	871	-3037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCTTAACTAACGATTG	NA	NA	NA	NA	NA	NA	NA	NA	110661852	110660498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110660778_110661004_110661139_110661485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006439	chr12	-	580	3	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	604	3631	604	-3631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAAACAGAGTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	110662119	110661092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110661139_110661485_110661853_110661952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006440	chr12	-	537	3	ISM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	5	4578	5	-4155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGTTGGTTTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	110662824	110661616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110661853_110661952_110662115_110662685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006441	chr12	+	2590	4	FSM	ENSMUSG00000037957.15	ENST00000335263.9	2586	4	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGTTTATCCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	110704399	110770673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_110704712_110745729_110745913_110759547_110760808_110769838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006442	chr12	+	2574	4	NNC	ENSMUSG00000037957.15	novel	2586	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTGTTTATCCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	110704412	110770673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_110704712_110745729_110745913_110759547_110760805_110769838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006443	chr12	+	2373	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	110704436	110761462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_110704712_110745729_110745913_110759547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006444	chr12	+	2107	2	ISM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	41295	0	41295	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	110745720	110761462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_110745913_110759547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006445	chr12	-	129	1	ISM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	30198	2815	1138	1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGAGGTAGGATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	110777175	110777046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110777000_110777200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006446	chr12	-	230	2	FSM	ENSMUSG00000056458.17	ENST00000523231.5	229	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGAGGTAGGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	110778314	110777047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_110777176_110778212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006447	chr12	-	186	2	NNC	ENSMUSG00000056458.17	novel	229	2	NA	NA	13	-23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCAGCACCCCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	110778300	110777070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_110777169_110778212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006448	chr12	-	795	1	FSM	ENSMUSG00000091498.5	ENSMUST00000181662.2	330	1	60	-525	60	525	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGGAATTAAAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	110825268	110824473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_110824500_110825300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006449	chr12	-	1283	1	ISM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	15253	0	15205	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCCTGTCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	110840326	110839043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110839000_110840300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006450	chr12	-	1526	3	ISM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	9332	253	9284	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTCCTGATAGGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	110846247	110839296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110840564_110843274_110843405_110846118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006451	chr12	-	248	1	Genic_Genomic	ENSMUSG00000021276.11	novel	NA	NA	NA	NA	13821	5	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTAGGAGGTTAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	110841710	110841462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_110841500_110841700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006452	chr12	-	309	2	ISM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	12145	65	12126	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTTTGACTACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	110843405	110841532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_110841711_110843274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006453	chr12	+	428	1	FSM	ENSMUSG00000096942.2	ENSMUST00000181233.2	438	1	79	-69	79	69	mono-exon	FALSE	NA	NA	NA	NA	NA	1517	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGAGGCAAAAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	110864626	110865054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_110864600_110865100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006454	chr12	-	2578	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGTCTTGACTGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	110945473	110941784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_110943983_110944381_110944562_110945273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006455	chr12	-	1564	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGGGATCTGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	110945430	110942862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006456	chr12	+	161	2	ISM	ENSMUSG00000021277.17	ENSMUST00000117269.8	6972	10	127	29537	34	-29528	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCTAACCCACCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	111132930	111204050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111133037_111203995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006457	chr12	+	147	2	ISM	ENSMUSG00000021277.17	ENSMUST00000060274.7	6896	11	71175	28067	71175	-28067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATGCTTACCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	111204156	111205511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111204255_111205462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006458	chr12	+	157	2	ISM	ENSMUSG00000021277.17	ENSMUST00000060274.7	6896	11	72479	24599	72479	-24599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAAGCACCAAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	111205460	111208979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111205515_111208876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006459	chr12	+	167	2	ISM	ENSMUSG00000021277.17	ENSMUST00000060274.7	6896	11	75896	23711	75896	-23711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTACTGAGAAAAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	111208877	111209867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111208982_111209804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006460	chr12	+	168	2	ISM	ENSMUSG00000021277.17	ENSMUST00000060274.7	6896	11	76904	18498	76904	-18498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCCCAATCAGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	111209885	111215080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111209973_111214999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006461	chr12	+	135	2	ISM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	84665	14427	84580	-14423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAAGGAGTGGAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	111217561	111219155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111217639_111219097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006462	chr12	+	228	2	ISM	ENSMUSG00000021277.17	ENSMUST00000060274.7	6896	11	86108	11795	86108	-11795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCACCTGCAGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	111219089	111221783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111219191_111221656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006463	chr12	+	180	2	ISM	ENSMUSG00000021277.17	ENSMUST00000060274.7	6896	11	88775	6369	88775	-6369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACAAAAGTGCGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	111221756	111227209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111221798_111227070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006464	chr12	+	196	2	ISM	ENSMUSG00000021277.17	ENSMUST00000060274.7	6896	11	94174	5550	94174	-5550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGGGGTGCTGATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	111227155	111228028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111227246_111227922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006465	chr12	+	1302	3	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	3484	-915	3484	607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTATCTTGTGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	111509533	111511964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111509699_111509960_111510096_111510962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006466	chr12	+	1014	1	Genic_Genomic	ENSMUSG00000021282.18	novel	NA	NA	NA	NA	6124	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGGGGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111512173	111513187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_111512200_111513200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006467	chr12	-	143	1	FSM	ENSMUSG00000113462.2	ENSMUST00000220847.2	233	1	94	-4	94	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCCACTGATGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	111525350	111525207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_111525200_111525400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006468	chr12	+	160	2	ISM	ENSMUSG00000007411.17	ENSMUST00000221753.2	2394	18	52774	27356	52774	-27356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACAGCTACTTACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	111594258	111594693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111594349_111594623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006469	chr12	+	1316	3	NNC	ENSMUSG00000007411.17	novel	3458	17	NA	NA	71669	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTTTTTCTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	111613153	111622596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_111613283_111613904_111614163_111621667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006470	chr12	+	1299	4	ISM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	72280	0	71727	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAAAACCTTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	111613211	111622646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111613283_111613904_111614163_111618391_111618419_111621703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006471	chr12	+	1214	2	ISM	ENSMUSG00000007411.17	ENST00000216288.11	2828	16	72501	-5	72418	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCACTGTCTCCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	111613902	111622657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111614163_111621703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006472	chr12	+	1020	2	NNC	ENSMUSG00000007411.17	novel	3086	15	NA	NA	72461	-92	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATGCCTGTGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	111613945	111622502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_111614167_111621703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006473	chr12	+	969	2	ISM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	78337	-31	78337	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAATTAAAAATTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	111619821	111622625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111619869_111621703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006474	chr12	+	948	1	NIC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	80215	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTAAAACCTTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	111621699	111622647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_111621700_111622600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006475	chr12	-	1004	5	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	987	0	987	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	111637785	111635794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006476	chr12	-	731	5	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	759	507	759	-507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAGGTGCTCAAGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	111638013	111636301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006477	chr12	-	723	5	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	372	863	372	-863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGCAGAAGGGGGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	111638400	111636657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006478	chr12	+	1564	2	ISM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	2708	0	2708	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	111647246	111650336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111647503_111649028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006479	chr12	-	1445	1	Genic_Genomic	ENSMUSG00000049792.7	novel	NA	NA	NA	NA	1996	1	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCCCCTGTGCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	111677365	111675920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_111675900_111677400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006480	chr12	-	1642	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	-1	498	-1	-82	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAGCCTAAATGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	111679692	111676419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_111677847_111679477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006481	chr12	+	1052	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	13	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGCAAGTTGAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	111679707	111700654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006482	chr12	-	790	1	Genic_Genomic	ENSMUSG00000021287.13	novel	NA	NA	NA	NA	5986	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACTTGCAAATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	111770415	111769625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_111769600_111770400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006483	chr12	-	839	4	FSM	ENSMUSG00000021287.13	ENST00000553264.5	835	4	1	-5	1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGATGCCAGGAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	111776400	111770906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_111771159_111771344_111771562_111774266_111774422_111776185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006484	chr12	+	881	4	ISM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	10682	0	10617	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	111791285	111794820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111791363_111791450_111791543_111793976_111794120_111794251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006485	chr12	+	649	4	ISM	ENSMUSG00000021286.9	ENST00000216602.10	1307	8	10793	208	10779	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACTCTCAATAGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	111791447	111794608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111791543_111792012_111792067_111793976_111794120_111794251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006486	chr12	+	723	2	ISM	ENSMUSG00000021286.9	ENST00000216602.10	1307	8	13311	-4	13297	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	111793965	111794820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_111794120_111794251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006487	chr12	+	573	1	NIC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	13579	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	111794247	111794820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_+_111794200_111794800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006488	chr12	+	310	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	111927804	111929789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_111927992_111929666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006489	chr12	-	364	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	3	-1	3	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCTTCCCCTGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	111933408	111927807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006490	chr12	-	172	1	NIC	ENSMUSG00000021290.7	novel	366	4	NA	NA	5348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	111927980	111927808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_111927800_111928000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006491	chr12	+	309	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	111927808	111929789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_111927995_111929666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006492	chr12	+	319	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	111927808	111929789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_111928005_111929666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006493	chr12	+	322	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAGAAATGATAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	111927808	111929789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr12_+_111928008_111929666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006494	chr12	-	201	2	ISM	ENSMUSG00000021290.7	ENSMUST00000222874.2	612	4	220	1858	220	-1858	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTAGGTTATATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	111933108	111929667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_111929788_111933027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006495	chr12	+	387	3	ISM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	10	9058	10	-9058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTTGAAGAGGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	112586488	112598715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112586745_112594734_112594838_112598687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006496	chr12	+	312	3	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	14052	6637	14052	-6616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGTGAGTGCTCCACCGA	NA	NA	NA	NA	NA	NA	NA	NA	112600578	112601157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112600686_112600813_112600896_112601034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006497	chr12	+	373	3	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	14279	5774	14279	-5753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCCAGCACTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	112600805	112602020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112600896_112601034_112601162_112601864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006498	chr12	+	391	3	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	14525	4841	14525	-4820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCCCTTCTGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	112601051	112602953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112601162_112601864_112602020_112602827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006499	chr12	+	359	3	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	16301	1613	16301	-1592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTGTTGCAGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	112602827	112606181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112602953_112604618_112604717_112606045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006500	chr12	+	394	2	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	19518	160	19518	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACTGTGTACATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	112606044	112607634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112606196_112607391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006501	chr12	+	310	1	ISM	ENSMUSG00000011148.15	ENSMUST00000180015.9	1819	13	20939	19	20939	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCGAGAGGTCATTACAC	NA	NA	NA	NA	NA	NA	NA	NA	112607465	112607775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112607500_112607800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006502	chr12	+	930	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCCTCCCTTCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	112611110	112615583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006503	chr12	+	921	4	NNC	ENSMUSG00000064326.14	novel	924	4	NA	NA	5	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCTCCCTTCCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	112611117	112615584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_112611519_112613271_112613464_112614258_112614416_112615413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006504	chr12	-	719	1	ISM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	19737	0	17025	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGCTTTCTGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	112620973	112620254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112620300_112621000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006505	chr12	-	724	2	ISM	ENSMUSG00000001729.15	ENSMUST00000128300.9	1342	12	16333	-514	16333	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCCAGTTTGTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	112621665	112620592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112621212_112621560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006506	chr12	-	1884	1	ISM	ENSMUSG00000118667.1	ENSMUST00000239525.1	11349	7	25765	1	25765	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTCCGGTTCGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	112740512	112738628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112738600_112740500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006507	chr12	+	623	3	ISM	ENSMUSG00000037594.12	ENSMUST00000177808.3	1207	6	462	3422	462	-3422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGCTGCTCAGAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112773056	112775916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112773429_112774493_112774631_112775802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006508	chr12	+	648	3	ISM	ENSMUSG00000037594.12	ENSMUST00000177808.3	1207	6	3207	-230	3207	230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCTGCGTGGCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	112775801	112779568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112775933_112778082_112778200_112779168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006509	chr12	+	447	1	Genic_Genomic	ENSMUSG00000037594.12	novel	NA	NA	NA	NA	6832	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTGTTGACTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	112779426	112779873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_112779400_112779900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006510	chr12	-	859	1	Genic_Genomic	ENSMUSG00000047832.10	novel	NA	NA	NA	NA	8303	1	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGGAGCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112784706	112783847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_112783800_112784700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006511	chr12	-	1315	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	6	1104	6	-1096	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCCAGAGACAGATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	112793003	112784952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_112785733_112792468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006512	chr12	-	399	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	1	1594	1	-1594	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGAGATCCTGTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	112793042	112785450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_112785733_112792925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006513	chr12	-	337	1	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	21700	0	21659	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTGCAGTTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	112871737	112871400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112871400_112871700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006514	chr12	-	596	2	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	21087	245	21046	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCGGTTTCCCTCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	112872350	112871645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112871924_112872032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006515	chr12	-	407	2	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	20066	1318	20066	-1318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCCGCAGGGCAGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	112873330	112872756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112873006_112873172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006516	chr12	-	432	3	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	18467	1842	18467	-1842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCACGCCATCGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	112874929	112873280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112873330_112874063_112874196_112874678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006517	chr12	-	446	3	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	17754	3273	17754	-3273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCGCTTCAACCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	112875642	112874711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112874928_112875322_112875439_112875528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006518	chr12	-	324	3	ISM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	16327	4760	16286	-4722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCCGTATCAGTAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	112877110	112876160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112876267_112876784_112876902_112877009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006519	chr12	-	305	3	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	16047	5386	16047	-5386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCGGGATGGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	112877349	112876824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112876902_112877009_112877124_112877235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006520	chr12	-	365	3	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	15496	5815	15496	-5815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGACCTGCCACTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	112877900	112877253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112877350_112877555_112877670_112877745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006521	chr12	-	394	3	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	15267	6143	15267	-6143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGAAGGAGAACTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	112878129	112877581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112877670_112877745_112877899_112877976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006522	chr12	-	355	3	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	14403	6432	14403	-6432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGGCACGCGGTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	112878993	112877870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112877899_112877976_112878128_112878817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006523	chr12	-	229	2	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	13328	8061	13328	-8061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGCTCCCTGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	112880068	112879499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112879614_112879953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006524	chr12	-	445	3	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	9293	8990	9293	-8990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGAGATGGTGGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	112884103	112880428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112880560_112883691_112883753_112883850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006525	chr12	-	311	2	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	7718	12412	7718	-12412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGGTCTGTCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	112885678	112883850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112884103_112885619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006526	chr12	-	331	2	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	622	14181	622	-14181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATGCCCTGTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	112892774	112885619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112885678_112892501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006527	chr12	-	414	2	ISM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	208	21150	208	-21150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGGACCGAGCGCGCGC	NA	NA	NA	NA	NA	NA	NA	NA	112893188	112892588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112892853_112893038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006528	chr12	-	1176	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	65	0	51	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGCGTAACATGAACT	NA	NA	NA	NA	NA	NA	NA	NA	112905679	112897910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006529	chr12	-	764	1	NIC	ENSMUSG00000002804.5	novel	1241	5	NA	NA	7056	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGCGTAACATGAACT	NA	NA	NA	NA	NA	NA	NA	NA	112898674	112897910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_112897900_112898700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006530	chr12	-	345	3	ISM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	3290	186	3283	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATCCATCTGAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	112902447	112898560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_112898671_112901975_112902178_112902414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006531	chr12	+	1567	2	ISM	ENSMUSG00000002803.15	ENSMUST00000221104.2	2085	4	697	0	626	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGATAAGTGACTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	112940866	112942565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112940992_112941123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006532	chr12	+	1442	1	ISM	ENSMUSG00000002803.15	ENSMUST00000221104.2	2085	4	954	0	883	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGATAAGTGACTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	112941123	112942565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_112941100_112942600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006533	chr12	+	2357	2	ISM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	56178	603	56153	-603	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCTGTCAAGCAACACCA	NA	NA	NA	NA	NA	NA	NA	NA	113034305	113037418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_113034402_113035157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006534	chr12	+	2335	1	Genic_Genomic	ENSMUSG00000021143.11	novel	NA	NA	NA	NA	57536	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGGGCCATGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	113035688	113038023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_+_113035700_113038000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006535	chr12	+	656	1	ISM	ENSMUSG00000021144.15	ENSMUST00000009099.13	2826	21	38273	0	38228	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	113100170	113100826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_113100200_113100800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006536	chr12	+	1442	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTGTCGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113103854	113109128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006537	chr12	+	1423	7	NNC	ENSMUSG00000006356.11	novel	1439	7	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113103861	113109126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_113104225_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006538	chr12	+	449	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	-1	-3	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTTTTTGTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	113115630	113117500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006539	chr12	+	922	1	ISM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	7202	0	7202	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCGCTGTCTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	113127242	113128164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_113127200_113128200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006540	chr12	+	1024	1	ISM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	2570	0	2570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTATTATTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	113152119	113153143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_113152100_113153100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006541	chr12	-	1110	5	FSM	ENSMUSG00000076614.8	ENST00000390555.3	1100	5	6	-16	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAATGGCATTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	113294068	113290154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr12_-_113290245_113291061_113291193_113292603_113292919_113293039_113293398_113293852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006542	chr12	-	92	1	NIC	ENSMUSG00000076614.8	novel	2482	6	NA	NA	3828	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAATGGCATTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	113290246	113290154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr12_-_113290200_113290200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006543	chr12	-	313	2	NNC	ENSMUSG00000076614.8	novel	1128	5	NA	NA	878	-2588	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCCATCATGGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	113293196	113292758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_113292915_113293039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006544	chr12	-	457	2	ISM	ENSMUSG00000076614.8	ENST00000390548.6	1128	5	4	3016	4	-3000	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTTTCCGTTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	113294070	113293170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_113293410_113293852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006545	chr12	-	772	3	ISM	ENSMUSG00000076617.10	ENST00000637539.2	1393	5	1021	-3	1021	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGTGGGGCTGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	113385306	113382567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_113382689_113384548_113384882_113384988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006546	chr12	-	826	3	NNC	ENSMUSG00000076617.10	novel	1393	5	NA	NA	395	-2141	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCCGATGCCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	113385932	113384711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_113384882_113384988_113385307_113385594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006547	chr12	-	829	3	NNC	ENSMUSG00000076617.10	novel	1393	5	NA	NA	4	-2525	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAGTGTTTGTGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	113386323	113385095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_-_113385307_113385594_113385925_113386035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006548	chr12	+	803	2	ISM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	7054	956	7002	-956	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTTCAATTGTGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	116018397	116023256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116018469_116022524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006549	chr12	+	781	1	ISM	ENSMUSG00000042063.12	ENSMUST00000183125.2	4779	3	12041	2763	12041	5	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTAATGTCCTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	116023436	116024217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116023400_116024200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006550	chr12	+	409	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	1787	39201	1787	-39201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAACGGTAAGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	116370815	116376785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116370931_116375994_116376184_116376680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006551	chr12	+	395	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	7651	36818	7651	-36818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGAAGAGGTAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	116376679	116379168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116376796_116378357_116378513_116379044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006552	chr12	+	400	5	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	13874	26473	13874	-26473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTGTATGTACGTATT	NA	NA	NA	NA	NA	NA	NA	NA	116382902	116389513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006553	chr12	+	383	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	19211	25629	19211	-25629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTCTGTTTTTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	116388239	116390357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116388335_116389398_116389525_116390195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006554	chr12	+	407	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	20401	24579	20401	-24579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGTGAGAGCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	116389429	116391407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116389525_116390195_116390376_116391275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006555	chr12	+	476	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	21247	22490	21247	-22490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAATCCCTGTTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	116390275	116393496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116390376_116391275_116391429_116393273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006556	chr12	+	400	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	22270	22225	22270	-22225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCCTGAGAGAGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	116391298	116393761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116391429_116393273_116393497_116393714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006557	chr12	+	398	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	29174	13617	29174	-13617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATACAGCCGTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	116398202	116402369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116398378_116401590_116401662_116402217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006558	chr12	+	419	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	34549	9254	34549	-9254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCTTCCGGTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	116403577	116406732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116403721_116404161_116404262_116406556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006559	chr12	+	422	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	37530	4615	37530	-4615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGGTAATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	116406558	116411371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116406745_116407920_116408062_116411276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006560	chr12	+	307	3	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	42246	0	42246	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATGACTGAACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	116411274	116415986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_116411381_116413995_116414097_116415886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006561	chr12	+	1114	3	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	32085	388	10573	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTTGCTGTGTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	117839334	117842053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_117839460_117840640_117840778_117841201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006562	chr12	+	899	1	ISM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	34293	0	12781	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117841542	117842441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_+_117841500_117842400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006563	chr12	-	567	1	Genic_Genomic	ENSMUSG00000025323.11	novel	NA	NA	NA	NA	65789	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATCACGGTGAACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	118199228	118198661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr12_-_118198700_118199200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006564	chr12	-	1045	2	ISM	ENSMUSG00000025323.11	ENST00000649633.1	5179	7	63870	1007	63870	-1007	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTACGGAGGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	118201147	118199992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_118200475_118200584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006565	chr12	-	826	3	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	39488	-31	39402	31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATAAGTTGCTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	118225615	118201657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_118202130_118218144_118218345_118225461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006566	chr12	-	682	2	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	2276	23775	2190	-23775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAACTGCTGTTTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	118262827	118225463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_118225691_118262372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006567	chr12	-	681	2	ISM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	567	61661	481	-61661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGCGTTTCAATACCAT	NA	NA	NA	NA	NA	NA	NA	NA	118264536	118263349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr12_-_118263928_118264433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006568	chr12	+	522	3	NNC	ENSMUSG00000048004.16	novel	514	3	NA	NA	-5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTTGGCCTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	119978477	119982432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_119978738_119979867_119979942_119982244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006569	chr12	+	504	3	NNC	ENSMUSG00000048004.16	novel	514	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGTTTGGCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	119978486	119982431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_119978738_119979875_119979942_119982244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006570	chr12	+	476	3	NNC	ENSMUSG00000048004.16	novel	514	3	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGTTTGGCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	119978512	119982431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr12_+_119978738_119979867_119979942_119982254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006571	chr13	+	963	1	FSM	ENSMUSG00000114003.2	ENSMUST00000221154.2	781	1	-19	-163	-19	163	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAATAATATCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	3348867	3349830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_3348900_3349800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006572	chr13	+	156	1	FSM	ENSMUSG00000113636.2	ENSMUST00000222175.2	1037	1	885	-4	885	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTCCCCATTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3403836	3403992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_3403800_3404000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006573	chr13	+	562	2	ISM	ENSMUSG00000097709.9	ENSMUST00000188642.2	674	3	230	0	230	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTGTGATCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	3548274	3551393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_3548359_3550915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006574	chr13	+	774	6	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	10800	7780	10585	-5103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAACTATTGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3598862	3610091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006575	chr13	+	749	5	ISM	ENSMUSG00000021218.11	ENST00000380181.7	1276	10	18035	510	18035	-510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTGTGCTTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	3606312	3614684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006576	chr13	+	1242	5	ISM	ENSMUSG00000021218.11	ENSMUST00000059515.8	2077	10	21879	38	21731	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTGTACTGCAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	3610008	3615782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006577	chr13	+	130	1	ISM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	27629	2050	27414	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGTATTGAGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3615691	3615821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_3615700_3615800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006578	chr13	+	815	1	Genic_Genomic	ENSMUSG00000021218.11	novel	NA	NA	NA	NA	28782	3	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTTTTTTCTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	3617059	3617874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_3617100_3617900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006579	chr13	+	2955	2	ISM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	15390	777	15390	-777	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATTCACCACACATATA	NA	NA	NA	NA	NA	NA	NA	NA	3699421	3703045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_3699511_3700179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006580	chr13	-	1405	1	Genic_Genomic	ENSMUSG00000021215.16	novel	NA	NA	NA	NA	10013	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGCATTTCTGTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	3933420	3932015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_3932000_3933400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006581	chr13	-	1429	2	ISM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	8642	1161	8497	154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCCATGAAATGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	3934936	3933178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_3934474_3934802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006582	chr13	+	1378	3	FSM	ENSMUSG00000021216.8	ENST00000380419.8	1392	3	15	-1	15	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATCTAATGAATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	3978102	3983616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_3978333_3980536_3980690_3982621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006583	chr13	+	690	5	NIC	ENSMUSG00000021210.17	novel	1396	9	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGCTGCAGGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	4486276	4499481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_4486447_4488488_4488606_4497006_4497130_4498983_4499094_4499311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006584	chr13	+	690	5	FSM	ENSMUSG00000021210.17	ENST00000421196.7	689	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGCTGCAGGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	4486276	4499481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_4486447_4488488_4488606_4497006_4497134_4498987_4499094_4499311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006585	chr13	+	747	6	FSM	ENSMUSG00000021210.17	ENST00000380753.8	767	6	21	-1	21	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGCTGCAGGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	4486297	4499481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_4486447_4488488_4488606_4496350_4496429_4497006_4497134_4498987_4499094_4499311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006586	chr13	+	601	5	ISM	ENSMUSG00000021210.17	ENSMUST00000021630.15	1396	9	4182	8047	2210	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGCAGGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	4488486	4499482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_4488606_4496350_4496429_4497006_4497130_4498983_4499094_4499311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006587	chr13	-	703	1	ISM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	17722	0	11347	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTGTCTATACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	4641451	4640748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_4640700_4641500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006588	chr13	-	1011	4	ISM	ENSMUSG00000045410.19	ENST00000334019.4	598	6	3905	-676	3905	676	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCCTGTCTGTATTATG	NA	NA	NA	NA	NA	NA	NA	NA	4648893	4642578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_4643298_4643560_4643644_4645069_4645154_4648768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006589	chr13	-	353	3	ISM	ENSMUSG00000045410.19	ENST00000334019.4	598	6	1446	1805	1446	-1805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGATTATAACTATTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	4651352	4645059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_4645154_4648768_4648892_4651216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006590	chr13	-	352	3	ISM	ENSMUSG00000045410.19	ENST00000334019.4	598	6	-1	5551	-1	-5551	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTGGTTTGAGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4652799	4648805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_4648892_4651216_4651353_4652669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006591	chr13	-	256	2	NNC	ENSMUSG00000045410.19	novel	598	6	NA	NA	14	-7961	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGGAGCCATACCAACT	NA	NA	NA	NA	NA	NA	NA	NA	4652784	4651215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_4651353_4652665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006592	chr13	-	333	4	ISM	ENSMUSG00000114053.2	ENSMUST00000223254.2	385	5	20941	-1	20941	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGTGTTAAAATCCATT	NA	NA	NA	NA	NA	NA	NA	NA	5753500	5673384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_5673414_5688843_5688951_5752478_5752592_5753416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006593	chr13	+	2102	3	FSM	ENSMUSG00000000078.8	ENST00000542957.1	4221	3	53	2066	37	-1962	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTCTCAGAGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	5911517	5918431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_5911842_5914766_5915344_5917230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006594	chr13	+	696	3	ISM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	3590	2864	3590	-2864	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTTTGGCCGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	5915070	5917529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_5915344_5916637_5916762_5917230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006595	chr13	+	1244	1	ISM	ENSMUSG00000000078.8	ENST00000542957.1	4221	3	7789	0	7773	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATTCTGAGGGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5919253	5920497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_5919300_5920500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006596	chr13	-	2316	6	ISM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	60174	1	60122	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTCAAAGATATGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	6638639	6629804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006597	chr13	-	1065	2	Antisense	novelGene_ENSMUSG00000052551.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGAGGCTAGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8524503	8520345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr13_-_8521197_8524289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006598	chr13	+	624	2	ISM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	46	5546	46	-5546	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTTAAAGTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	8935582	8936941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_8936033_8936767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006599	chr13	+	612	1	Genic_Genomic	ENSMUSG00000058258.15	novel	NA	NA	NA	NA	6345	6	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAAATACTTGTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8941881	8942493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_8941900_8942500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006600	chr13	-	1281	1	Genic_Genomic	ENSMUSG00000021149.9	novel	NA	NA	NA	NA	28473	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTTGAGCATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	9017646	9016365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_9016400_9017600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006601	chr13	-	1301	2	ISM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	21776	5787	21776	-5787	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	9024343	9022153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_9023311_9024199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006602	chr13	-	642	1	ISM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	79833	7	35447	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACTCTTGTCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	9735517	9734875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_9734900_9735500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006603	chr13	-	1059	3	ISM	ENSMUSG00000021156.18	ENSMUST00000110633.8	1857	13	31204	-477	31204	477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGCAGGGCTAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	9739760	9736420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_9737021_9739098_9739285_9739487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006604	chr13	-	401	2	ISM	ENSMUSG00000021311.10	ENST00000681102.1	3496	30	60160	2164	60160	-2164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTTGGGTAGATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	12208698	12205088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_12205291_12208499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006605	chr13	-	453	3	ISM	ENSMUSG00000021311.10	ENST00000681102.1	3496	30	26101	33376	26101	-33376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGGTCCAGGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	12242757	12236300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_12236449_12237040_12237158_12242569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006606	chr13	-	444	3	ISM	ENSMUSG00000021311.10	ENST00000681102.1	3496	30	22887	34116	22887	-34116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTGAAGCCAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	12245971	12237040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_12237158_12242569_12242756_12245830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006607	chr13	-	2411	7	ISM	ENSMUSG00000057554.14	ENST00000526589.5	1241	8	2847	-1276	2847	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTCTCTGGAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	12471290	12454295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465915_12468161_12468286_12469615_12469827_12471224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006608	chr13	-	1586	1	NIC	ENSMUSG00000057554.14	novel	2843	11	NA	NA	18256	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATACTCTCTGGAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	12455881	12454295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_12454300_12455900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006609	chr13	-	517	4	ISM	ENSMUSG00000057554.14	ENST00000416919.6	1070	7	4309	6535	4309	-6381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTCTTCAGGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	12469828	12462106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_12462194_12463299_12463389_12465739_12465843_12469590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006610	chr13	-	424	3	ISM	ENSMUSG00000057554.14	ENST00000416919.6	1070	7	2823	10173	2823	-10019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGTTTGAAGAGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	12471314	12465744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_12465843_12469590_12469827_12471224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006611	chr13	-	398	3	ISM	ENSMUSG00000057554.14	ENST00000352231.6	1193	8	10	13971	10	-13865	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGAGCGTGCATGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	12474127	12469590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_12469827_12471224_12471314_12474054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006612	chr13	+	1222	2	ISM	ENSMUSG00000057069.8	ENSMUST00000220811.2	3341	16	38467	702	38467	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTCATTTCCTATACCA	NA	NA	NA	NA	NA	NA	NA	NA	12619255	12625583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_12619351_12624456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006613	chr13	+	1179	1	ISM	ENSMUSG00000057069.8	ENSMUST00000220811.2	3341	16	44318	0	44318	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTTCTCCATGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	12625106	12626285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_12625100_12626300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006614	chr13	-	918	2	ISM	ENSMUSG00000097715.3	ENSMUST00000220758.2	1942	7	32539	0	32437	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTGTAGAGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	12632738	12629945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_12630739_12632613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006615	chr13	-	796	1	NIC	ENSMUSG00000097715.3	novel	1942	7	NA	NA	34434	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTGTAGAGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	12630741	12629945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_12629900_12630700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006616	chr13	-	850	5	NNC	ENSMUSG00000056457.7	novel	857	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	12814967	12805704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_12805991_12806880_12807064_12808176_12808285_12811719_12811896_12814870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006617	chr13	-	858	5	FSM	ENSMUSG00000056457.7	ENSMUST00000099805.3	857	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	12814969	12805704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_12805997_12806880_12807064_12808176_12808285_12811719_12811896_12814870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006618	chr13	-	850	5	NNC	ENSMUSG00000056457.7	novel	857	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	12814968	12805704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_12805997_12806880_12807057_12808176_12808285_12811719_12811896_12814870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006619	chr13	-	847	5	FSM	ENSMUSG00000079092.5	ENSMUST00000110594.4	842	5	1	-6	1	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAATGGAGAATTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	13179967	13170703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_13170997_13171869_13172053_13173165_13173274_13176718_13176895_13179880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006620	chr13	-	753	4	NNC	ENSMUSG00000079092.5	novel	842	5	NA	NA	3025	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13176894	13170704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_13170991_13171869_13172053_13173165_13173274_13176718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006621	chr13	-	758	4	NNC	ENSMUSG00000079092.5	novel	842	5	NA	NA	3030	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13176889	13170704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_13170997_13171869_13172053_13173165_13173274_13176714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006622	chr13	-	752	4	NNC	ENSMUSG00000079092.5	novel	842	5	NA	NA	3025	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAATGGAGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13176894	13170704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_13170997_13171869_13172046_13173165_13173274_13176718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006623	chr13	-	593	4	FSM	ENSMUSG00000079092.5	ENSMUST00000221612.2	596	4	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGAAATATCATGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	13179916	13170798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_13170997_13171869_13172053_13176718_13176895_13179880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006624	chr13	+	469	2	ISM	ENSMUSG00000055360.14	ENSMUST00000126540.8	971	6	7870	-7	7847	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAATGGGGAATTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13365170	13366515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_13365354_13366229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006625	chr13	-	171	2	ISM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	28537	4828	28527	-4828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTACTCCTTCCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	13539672	13538028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_13538158_13539630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006626	chr13	-	184	2	ISM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	26003	6429	25993	-6429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGGGACATGACAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	13542206	13539629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_13539781_13542173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006627	chr13	+	2296	5	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	68834	546	68834	-546	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGCTAAAACTAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	13680969	13686308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006628	chr13	+	2257	1	ISM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	72462	0	72462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGTGTTTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	13684597	13686854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_13684600_13686900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006629	chr13	+	434	3	ISM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	5	19635	5	-19635	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTGGCATGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	14140907	14150220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14141043_14145351_14145453_14150022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006630	chr13	+	407	3	ISM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	9118	7806	9118	-7806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTGCGCTTTGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	14150020	14162049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14150220_14155185_14155282_14161937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006631	chr13	+	271	3	ISM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	14281	4420	14281	-4420	internal_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTACACTGTTCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	14155183	14165435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14155282_14161937_14162049_14165373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006632	chr13	+	296	3	ISM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	24462	730	24462	-730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAAACATGGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	14165364	14169125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14165429_14166031_14166138_14168999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006633	chr13	+	283	2	ISM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	28096	-1	28096	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTAACAAGGTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	14168998	14169856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14169126_14169700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006634	chr13	+	157	1	NIC	ENSMUSG00000039242.11	novel	3892	12	NA	NA	28797	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTAACAAGGTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	14169699	14169856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_14169700_14169900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006635	chr13	+	1480	1	ISM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	43126	0	31277	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	14172179	14173659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14172200_14173700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006636	chr13	-	459	4	ISM	ENSMUSG00000039233.13	ENST00000647428.1	1254	12	11186	0	11186	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAACCGTAAGAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	14178281	14172671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_14172767_14172947_14173040_14175645_14175764_14178127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006637	chr13	-	462	4	ISM	ENSMUSG00000039233.13	ENST00000647428.1	1254	12	9599	319	9599	-319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGTGTCAGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	14179868	14172990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_14173040_14175645_14175764_14178127_14178282_14179727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006638	chr13	-	1137	1	ISM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	11693	0	11623	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAATGTTAATTTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	14226380	14225243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_14225200_14226400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006639	chr13	+	534	2	ISM	ENSMUSG00000039219.19	ENSMUST00000110533.2	3020	15	97502	1135	97502	-1135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTCAAATGTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	14335885	14339132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14335981_14338693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006640	chr13	+	484	1	Genic_Genomic	ENSMUSG00000039219.19	novel	NA	NA	NA	NA	101412	12	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAAAGGTATGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	14339795	14340279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_14339800_14340300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006641	chr13	+	1235	1	ISM	ENSMUSG00000039219.19	ENSMUST00000110536.8	5783	23	134343	5	134329	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGATTTTGTTTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	14372712	14373947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14372700_14373900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006642	chr13	-	1586	1	NIC	ENSMUSG00000021301.10	novel	9460	29	NA	NA	203730	6	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGTCTGAGAATGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	14405348	14403762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_14403800_14405300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006643	chr13	-	1822	3	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	197486	-1290	197486	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACTGGGAAAAAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	14411592	14403839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_14405346_14408883_14409083_14411475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006644	chr13	-	1588	3	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	111871	85474	111871	-85474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTTAGACTACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	14497207	14490603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_14491946_14493458_14493560_14497062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006645	chr13	-	145	1	ISM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	4837	0	4837	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTGAGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	14782913	14782768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_14782800_14782900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006646	chr13	-	170	2	ISM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	1635	2495	1635	-2495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTATGAGAAAGTACGCC	NA	NA	NA	NA	NA	NA	NA	NA	14786115	14785263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_14785326_14786007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006647	chr13	-	173	2	ISM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	127	3395	127	-3395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCTCACAGAGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	14787623	14786163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_14786190_14787476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006648	chr13	+	2278	6	FSM	ENSMUSG00000015671.12	ENST00000445517.1	623	6	-2	-1653	-2	-399	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGAGAGATGGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	14787848	14801822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_14787901_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006649	chr13	+	1880	6	ISM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	3509	866	3483	-866	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTTGCTCTTGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	14791333	14801355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006650	chr13	+	1928	1	Genic_Genomic	ENSMUSG00000015671.12	novel	NA	NA	NA	NA	12447	4	mono-exon	FALSE	NA	NA	NA	NA	NA	324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTGGTGGTTGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	14800297	14802225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_14800300_14802200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006651	chr13	+	760	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	7	1268	7	-1268	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCGCTGCATAACATCTG	NA	NA	NA	NA	NA	NA	NA	NA	14804745	14811520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_14804870_14810884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006652	chr13	+	1720	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	41	1153	41	-260	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGTTCTTTGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	14804873	14812528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_14804950_14810884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006653	chr13	+	1718	1	Genic_Genomic	ENSMUSG00000039182.7	novel	NA	NA	NA	NA	7135	4	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGCTAGCAAGTGAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	14811967	14813685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_14812000_14813700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006654	chr13	+	254	1	FSM	ENSMUSG00000113389.2	ENSMUST00000223112.2	497	1	243	0	243	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATTACCCCTAACACC	NA	NA	NA	NA	NA	NA	NA	NA	15293459	15293713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_15293500_15293700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006655	chr13	+	406	2	FSM	ENSMUSG00000021318.16	ENST00000642432.1	397	2	-5	-4	-5	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTCCTGCCAATTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	15721374	15723231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_15721534_15722984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006656	chr13	+	2420	2	ISM	ENSMUSG00000041324.15	ENSMUST00000164993.2	1529	3	2721	-963	2721	963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCAAACATTTCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	16191780	16202759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_16192269_16200827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006657	chr13	+	1911	1	ISM	ENSMUSG00000041324.15	ENSMUST00000042603.14	6390	5	17860	0	15236	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTCTACTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	16204295	16206206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_16204300_16206200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006658	chr13	-	409	5	ISM	ENSMUSG00000055137.8	ENST00000401647.7	728	9	22978	254270	22978	105222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATCCTTAGATTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	17846342	17752072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_17752167_17819365_17819487_17836803_17836855_17837323_17837410_17846285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006659	chr13	+	481	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	184	2007	184	-158	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTGTGTAAAAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	17870181	17871683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_17870406_17871426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006660	chr13	+	312	1	Genic_Genomic	ENSMUSG00000012429.10	novel	NA	NA	NA	NA	3383	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTAAACAGTCTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	17873380	17873692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_17873400_17873700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006661	chr13	-	268	1	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	63401	0	63401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTTCATTGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	18055423	18055155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_18055200_18055400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006662	chr13	-	621	3	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	50907	1696	50907	-1696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATGTATCACTAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	18067917	18056851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_18057087_18063091_18063267_18067706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006663	chr13	-	399	3	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	47135	8073	47135	-8073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTCCTGGTTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	18071689	18063228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_18063267_18067706_18067916_18071537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006664	chr13	-	426	3	ISM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	13	12694	13	-12694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCAGATCGACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	18118811	18067849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_18067916_18071537_18071688_18118601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006665	chr13	-	3137	1	Genic_Genomic	ENSMUSG00000075054.6	novel	NA	NA	NA	NA	8640	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGATGTGTTTTTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	18159048	18155911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_18155900_18159000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006666	chr13	-	328	3	FSM	ENSMUSG00000075054.6	ENST00000448268.5	326	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACCAAGCGAAAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	18167857	18164176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_18164291_18166212_18166335_18167765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006667	chr13	-	344	1	ISM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	37684	31	18607	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATAATAAATCCAACG	NA	NA	NA	NA	NA	NA	NA	NA	19542220	19541876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_19541900_19542200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006668	chr13	-	392	2	ISM	ENSMUSG00000003062.14	ENST00000434197.5	1146	7	17604	107	17604	28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTGGTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	19543223	19541983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_19542300_19543147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006669	chr13	-	2366	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTATTAAGTCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	19803973	19775871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_19777519_19778616_19778826_19803463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006670	chr13	+	555	2	ISM	ENSMUSG00000021319.8	ENSMUST00000222992.2	1062	6	5339	3	5339	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATGTCAAGCAAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	19814263	19816867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_19814300_19816348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006671	chr13	+	495	1	ISM	ENSMUSG00000021319.8	ENSMUST00000222464.2	4049	5	9231	165	7580	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTGTTTGTTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	19816504	19816999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_19816500_19817000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006672	chr13	+	317	4	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	74856	43799	74856	-43799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCGTAGCCTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	21099120	21163713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21099171_21101229_21101325_21125983_21126076_21163633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006673	chr13	+	348	3	NNC	ENSMUSG00000021322.9	novel	1626	20	NA	NA	139372	-23291	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGATACCACCCTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	21163636	21184221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_21163721_21179554_21179665_21184067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006674	chr13	+	341	4	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	139373	23295	139373	-23295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAACCGATACCACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	21163637	21184217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21163717_21178800_21178838_21179589_21179665_21184067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006675	chr13	+	338	4	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	162818	2210	162818	-2210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGCATAAGAGACCATG	NA	NA	NA	NA	NA	NA	NA	NA	21187082	21205302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21187127_21189200_21189298_21197281_21197359_21205182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006676	chr13	+	326	3	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	173017	0	173017	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGGAAGGCGCATCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	21197281	21207512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21197359_21205182_21205298_21207378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006677	chr13	+	1207	3	ISM	ENSMUSG00000021326.14	ENSMUST00000223065.2	2046	8	-281	8993	12	-8981	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCAGTTCTCCTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	21364112	21368040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21365085_21366153_21366250_21367901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006678	chr13	-	2804	2	Antisense	novelGene_ENSMUSG00000021326.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATCCAGGGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	21378894	21374063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr13_-_21374171_21376197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006679	chr13	+	2724	2	ISM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	11287	-1	10080	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTTATTTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21375387	21378894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21375417_21376199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006680	chr13	+	159	1	ISM	ENSMUSG00000021326.14	ENSMUST00000222544.2	4312	9	13261	1860	11568	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTTGTTTTTGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	21376875	21377034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21376900_21377000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006681	chr13	+	1190	1	ISM	ENSMUSG00000021326.14	ENSMUST00000222544.2	4312	9	14090	0	12397	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTGTTATTTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21377704	21378894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21377700_21378900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006682	chr13	+	497	3	FSM	ENSMUSG00000004341.9	ENST00000474923.1	489	3	-1	-7	-1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGTTCCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	21497814	21503268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_21497972_21501154_21501273_21503046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006683	chr13	+	343	2	ISM	ENSMUSG00000004341.9	ENST00000474923.1	489	3	3329	0	3329	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAAATTTTGTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21501144	21503261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_21501273_21503046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006684	chr13	+	229	1	NIC	ENSMUSG00000004341.9	novel	1340	5	NA	NA	5224	7	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGTTCCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	21503039	21503268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_21503000_21503300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006685	chr13	-	994	1	Genic_Genomic	ENSMUSG00000021327.20	novel	NA	NA	NA	NA	8523	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGGTTCTTACTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	21572165	21571171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_21571200_21572200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006686	chr13	-	2080	5	FSM	ENSMUSG00000021327.20	ENST00000377255.3	2081	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTATCTGGAAATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	21580687	21571563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_21572872_21578118_21578256_21578686_21578752_21578924_21579077_21580269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006687	chr13	+	1121	2	FSM	ENSMUSG00000118467.2	ENST00000446474.5	1118	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCCTGACAATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21601473	21604778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_21602175_21604358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006688	chr13	-	1008	1	ISM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	10473	0	10473	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATTATTGAGGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	21627357	21626349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_21626300_21627400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006689	chr13	+	140	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	255	-2	255	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACATTACGAATCACCA	NA	NA	NA	NA	NA	NA	NA	NA	21900846	21900986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_21900800_21901000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006690	chr13	+	404	1	FSM	ENSMUSG00000101355.2	ENSMUST00000188775.2	411	1	8	-1	8	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCGTCTTTCTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21901836	21902240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_21901800_21902200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006691	chr13	-	641	1	FSM	ENSMUSG00000058773.3	ENSMUST00000080511.3	743	1	102	0	102	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTGCGACAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	21964693	21964052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_21964100_21964700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006692	chr13	-	130	1	FSM	ENSMUSG00000069309.3	ENSMUST00000091751.3	393	1	263	0	263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATTGTTTCCTGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	21971125	21970995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_21971000_21971100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006693	chr13	+	470	1	FSM	ENSMUSG00000069308.8	ENSMUST00000102982.2	469	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTACCTTACTCGGACA	NA	NA	NA	NA	NA	NA	NA	NA	21971677	21972147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_21971700_21972100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006694	chr13	-	1225	2	FSM	ENSMUSG00000069307.8	ENSMUST00000091749.4	1254	2	29	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCACTTTTGACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	21994338	21991446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_21992298_21993964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006695	chr13	+	437	1	FSM	ENSMUSG00000094248.2	ENSMUST00000091745.6	480	1	43	0	43	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1341	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTAAATCGATGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	21994677	21995114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_21994700_21995100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006696	chr13	-	455	1	FSM	ENSMUSG00000094777.3	ENSMUST00000081342.7	482	1	57	-30	57	30	mono-exon	FALSE	NA	NA	NA	NA	NA	1452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAATCGATGTCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	22017620	22017165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_22017200_22017600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006697	chr13	+	510	2	FSM	ENSMUSG00000006720.17	ENST00000374435.3	688	2	108	70	108	-70	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTGTAATGAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	22143056	22143987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_22143321_22143741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006698	chr13	+	329	2	NNC	ENSMUSG00000006720.17	novel	688	2	NA	NA	318	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAAATACACCTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	22143266	22144019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_22143323_22143746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006699	chr13	+	323	1	ISM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	14471	598	786	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGCAAAGCCGTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	22143734	22144057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_22143700_22144100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006700	chr13	-	163	1	NIC	ENSMUSG00000006179.10	novel	2155	12	NA	NA	3337	13	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAATGTTTTATATTCT	NA	NA	NA	NA	NA	NA	NA	NA	22187245	22187082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_22187100_22187200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006701	chr13	-	477	3	ISM	ENSMUSG00000006179.10	ENSMUST00000150547.3	1159	5	1171	375	1171	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAGAAAAGATCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	22189411	22187095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_22187242_22187315_22187496_22189260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006702	chr13	-	354	3	ISM	ENSMUSG00000006179.10	ENST00000421826.6	665	5	95	364	95	-364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCAGCACTGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	22193735	22187459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_22187496_22189260_22189403_22193559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006703	chr13	-	211	2	NNC	ENSMUSG00000006179.10	novel	665	5	NA	NA	198	-2165	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACCCACCTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	22193632	22189260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_22189399_22193559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006704	chr13	-	198	2	ISM	ENSMUSG00000006179.10	ENST00000421826.6	665	5	-1	6464	-1	-6464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCGAGTAGAGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	22193831	22193559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_22193727_22193800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006705	chr13	+	336	1	FSM	ENSMUSG00000062727.5	ENSMUST00000110455.4	476	1	140	0	140	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCACCTTCGAGTACG	NA	NA	NA	NA	NA	NA	NA	NA	22220179	22220515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_22220200_22220500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006706	chr13	-	295	1	FSM	ENSMUSG00000060639.6	ENSMUST00000102977.4	727	1	432	0	432	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGGAAAACAGCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	22225100	22224805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_22224800_22225100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006707	chr13	-	452	1	FSM	ENSMUSG00000069301.6	ENSMUST00000091741.6	485	1	33	0	33	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCACTTAGCTTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	22227081	22226629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_22226600_22227100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006708	chr13	-	347	1	Genic_Genomic	ENSMUSG00000036376.4	novel	NA	NA	NA	NA	5160	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGACTCTGTAAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	23602876	23602529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_23602500_23602900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006709	chr13	-	798	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	37	3621	37	-3621	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCGTAGTCAATAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	23607999	23606151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_23606506_23606652_23606853_23607755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006710	chr13	-	1713	5	FSM	ENSMUSG00000000706.17	ENST00000244513.10	1709	5	1	-5	1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAGAAAGGCCATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	23649352	23642722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_23643565_23644624_23644785_23645655_23645938_23648401_23648750_23649271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006711	chr13	-	1407	4	NNC	ENSMUSG00000000706.17	novel	1709	5	NA	NA	790	-38	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCACATTGGGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	23648563	23642765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_23643565_23644624_23644785_23645651_23645938_23648401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006712	chr13	-	572	1	NIC	ENSMUSG00000053216.16	novel	2226	10	NA	NA	7903	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGGTCACAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	23662745	23662173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_23662200_23662700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006713	chr13	-	954	3	ISM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	3568	557	3568	-557	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGTTTGGAAGCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	23667080	23662730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_23663271_23665893_23666116_23666888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006714	chr13	-	834	3	ISM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	0	3740	0	-3740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAAGGTAAAAGAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	23670648	23665913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_23666116_23666888_23667171_23670298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006715	chr13	+	291	1	FSM	ENSMUSG00000099517.3	ENSMUST00000080859.8	530	1	239	0	239	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATCAGTTTCATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	23719830	23720121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_23719800_23720100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006716	chr13	-	448	1	FSM	ENSMUSG00000069272.7	ENSMUST00000102969.6	704	1	262	-6	262	6	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCACTAGGACATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	23755132	23754684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_23754700_23755100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006717	chr13	-	168	1	FSM	ENSMUSG00000069268.5	ENSMUST00000105106.2	461	1	293	0	293	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACACCGAATACTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23758077	23757909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_23757900_23758100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006718	chr13	-	555	1	FSM	ENSMUSG00000080741.4	ENSMUST00000120330.2	320	1	-133	-102	-133	102	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGTTTTTTGGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	23805165	23804610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_23804600_23805200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006719	chr13	+	868	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	5	283	5	-283	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAGTACAAATCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	23868186	23876608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_23868605_23876158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006720	chr13	+	469	1	Genic_Genomic	ENSMUSG00000018102.6	novel	NA	NA	NA	NA	8243	2	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGAGCTGAAGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	23876424	23876893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_23876400_23876900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006721	chr13	-	531	2	FSM	ENSMUSG00000006611.16	ENST00000317896.11	528	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGGGTGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	23892276	23889854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_23890120_23892010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006722	chr13	+	1564	1	FSM	ENSMUSG00000036181.3	ENSMUST00000040914.3	1560	1	-2	-2	-2	2	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGACTCTTTCATACCCA	NA	NA	NA	NA	NA	NA	NA	NA	23922788	23924352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_23922800_23924400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006723	chr13	-	236	1	FSM	ENSMUSG00000069310.5	ENSMUST00000091752.5	630	1	399	-5	399	5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTAGTTCTTTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	23929186	23928950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_23929000_23929200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006724	chr13	-	286	1	ISM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	9731	0	9731	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24936113	24935827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_24935800_24936100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006725	chr13	-	346	2	ISM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	8403	151	8403	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGTTTGAATCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	24937441	24935978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_24936214_24937330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006726	chr13	-	280	3	ISM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	5176	1503	5176	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTCATCCCACAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	24940668	24937330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_24937442_24937640_24937724_24940582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006727	chr13	-	269	3	ISM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	4186	1843	4186	-1843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTACGAAGCGCTGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	24941658	24937670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_24937724_24940582_24940719_24941578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006728	chr13	-	262	3	ISM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	1645	4764	1645	-4764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAGGTATGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24944199	24940591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_24940719_24941578_24941657_24944142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006729	chr13	+	750	5	FSM	ENSMUSG00000019132.12	ENST00000378102.3	754	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTTCTTTTCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24986000	24996791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_24986144_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006730	chr13	-	723	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGAAGTATTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	25015501	25001929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_25002175_25004697_25004883_25015208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006731	chr13	+	897	2	ISM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	8726	324	8713	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAGACTTAATTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25024387	25025812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_25024542_25025069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006732	chr13	+	791	1	ISM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	9684	0	9671	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGACTTTTTTCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	25025345	25026136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_25025300_25026100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006733	chr13	+	498	2	ISM	ENSMUSG00000006711.16	ENST00000535378.5	3586	19	2638	42332	2638	-42332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGAAAACTGTAATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	25041107	25042098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_25041411_25041903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006734	chr13	+	411	3	ISM	ENSMUSG00000006711.16	ENST00000616673.4	2210	12	8350	17789	8350	-17789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGGAGGTGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	25063586	25066641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_25063728_25064752_25064905_25066523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006735	chr13	+	360	3	ISM	ENSMUSG00000006711.16	ENST00000616673.4	2210	12	9515	16639	9515	-16639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGACTCTAGTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	25064751	25067791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_25064905_25066523_25066663_25067723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006736	chr13	+	399	3	ISM	ENSMUSG00000006711.16	ENST00000616673.4	2210	12	11331	14726	11331	-14726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCTCCCACAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	25066567	25069704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_25066663_25067723_25067884_25069560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006737	chr13	+	410	1	ISM	ENSMUSG00000006711.16	ENSMUST00000006893.9	4973	21	54907	819	28788	4	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGGGACTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	25084024	25084434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_25084000_25084400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006738	chr13	-	715	4	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	23099	0	23099	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTTTTAAAGTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25179480	25176841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006739	chr13	-	331	1	NIC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	25407	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTTTTAAAGTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25177172	25176841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_25176800_25177200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006740	chr13	-	521	4	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	19540	1865	19540	-1865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATGCAACTCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	25183039	25178706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_25178826_25179327_25179481_25181010_25181128_25182907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006741	chr13	-	584	4	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	16787	2486	16787	-2486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGATGCCCTACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	25185792	25179327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_25179481_25181010_25181128_25182907_25183039_25185609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006742	chr13	-	454	4	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	36	4178	36	-4178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCTTGTAAGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	25202543	25181019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_25181128_25182907_25183039_25185609_25185784_25202502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006743	chr13	+	718	1	FSM	ENSMUSG00000060198.8	ENSMUST00000180940.2	627	1	-41	-50	-41	50	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCGTTGTTGGAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	26676495	26677213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_26676500_26677200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006744	chr13	+	435	1	FSM	ENSMUSG00000113061.2	ENSMUST00000223428.2	607	1	190	-18	190	18	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGATAAGACATTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	28441700	28442135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_28441700_28442100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006745	chr13	-	1251	2	ISM	ENSMUSG00000085936.8	ENSMUST00000154298.2	433	4	10863	-917	6953	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAGTATAAAGAATATAA	NA	NA	NA	NA	NA	NA	NA	NA	28689901	28644006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_28645045_28689688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006746	chr13	-	439	3	FSM	ENSMUSG00000085936.8	ENST00000657660.1	433	3	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGCTATGGTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	28696856	28644874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_28645081_28676781_28676873_28696714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006747	chr13	-	421	3	NNC	ENSMUSG00000085936.8	novel	433	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTTTGGCTATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	28696850	28644878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_28645081_28676781_28676861_28696710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006748	chr13	-	1065	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	3730	0	3730	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	29133966	29132901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_29132900_29134000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006749	chr13	-	1142	3	ISM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	498126	0	498115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	29541531	29509283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_29510212_29538612_29538778_29541482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006750	chr13	+	629	3	ISM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	101525	974	101525	-974	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCATGACTCCAGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	30421996	30429726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_30422079_30425146_30425299_30429331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006751	chr13	+	599	1	ISM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	109630	0	109630	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTGTATCAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	30430101	30430700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_30430100_30430700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006752	chr13	+	1057	1	ISM	ENSMUSG00000113424.2	ENSMUST00000222575.2	1835	2	5768	0	5768	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTGTTGTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30560109	30561166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_30560100_30561200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006753	chr13	-	766	1	Genic_Genomic	ENSMUSG00000038462.4	novel	NA	NA	NA	NA	4290	1	mono-exon	FALSE	NA	NA	NA	NA	NA	494	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTATTTTGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30725055	30724289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_30724300_30725100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006754	chr13	-	1065	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	-2	300	-2	-300	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAACATTAATGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	30729347	30724590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_30725325_30729016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006755	chr13	-	373	1	Genic_Genomic	ENSMUSG00000021357.15	novel	NA	NA	NA	NA	136008	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTTTGTGTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	30998273	30997900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_30997900_30998300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006756	chr13	-	408	2	ISM	ENSMUSG00000021357.15	ENSMUST00000102946.8	4375	29	132238	1128	132238	-1128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTCCATCATGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	31002043	30999029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_30999375_31001980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006757	chr13	+	2363	2	FSM	ENSMUSG00000038402.3	ENSMUST00000042054.3	2363	2	3	-3	3	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTCTAGGGACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	31809801	31815389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_31811240_31814464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006758	chr13	+	1024	3	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	332	15694	332	-15694	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAATCAACTCACTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	32986352	32990898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_32987028_32989320_32989513_32990741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006759	chr13	+	937	4	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	14392	78	14392	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAATACTGCATAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	33000412	33006514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_33000466_33004201_33004358_33005021_33005102_33005866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006760	chr13	+	688	1	ISM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	19884	0	19884	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTTCTTCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	33005904	33006592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_33005900_33006600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006761	chr13	-	263	1	Genic_Genomic	ENSMUSG00000044734.17	novel	NA	NA	NA	NA	8835	4	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATCCAATAAATTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	33026333	33026070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_33026100_33026300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006762	chr13	-	543	3	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	5370	901	5370	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGGAAGTGAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	33029798	33026975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_33027206_33029291_33029460_33029653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006763	chr13	-	341	3	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	3677	3306	3677	-3306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAGATGCCTTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	33031491	33029380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_33029460_33029653_33029797_33031372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006764	chr13	-	362	3	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	2426	3619	2426	-3619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGGACACAACGGATG	NA	NA	NA	NA	NA	NA	NA	NA	33032742	33029693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_33029797_33031372_33031491_33032601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006765	chr13	-	242	2	NNC	ENSMUSG00000044734.17	novel	1918	7	NA	NA	2448	-5297	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGCTGAGCAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	33032720	33031371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_33031491_33032597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006766	chr13	-	411	3	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	769	5321	769	-5321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTCAAAGGTCAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	33034399	33031395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_33031491_33032601_33032740_33034221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006767	chr13	+	1174	2	ISM	ENSMUSG00000042842.12	ENSMUST00000164541.2	1719	6	12039	73	12039	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTTACAGTACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	33161524	33162972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_33161664_33161937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006768	chr13	+	1077	1	Genic_Genomic	ENSMUSG00000042842.12	novel	NA	NA	NA	NA	12492	4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTTCTTTTGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	33161977	33163054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_33162000_33163100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006769	chr13	+	1755	2	ISM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	9378	853	9378	-853	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCTCAGAAATGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	33197901	33201085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_33198001_33199429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006770	chr13	+	1744	1	ISM	ENSMUSG00000045827.11	ENSMUST00000063191.14	3472	8	12964	0	11673	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTTCTTCATGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	33200196	33201940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_33200200_33201900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006771	chr13	+	1489	4	ISM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	6110	1264	6110	-1264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACTGCAACCATCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	33217508	33224603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_33217628_33219498_33219642_33221954_33222111_33223532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006772	chr13	+	1119	1	Genic_Genomic	ENSMUSG00000021403.4	novel	NA	NA	NA	NA	13351	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGCCTGATCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	33224749	33225868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_33224700_33225900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006773	chr13	-	531	1	Genic_Genomic	ENSMUSG00000060147.16	novel	NA	NA	NA	NA	17552	4	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGCCTCACTGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	34102427	34101896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_34101900_34102400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006774	chr13	-	827	3	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	12925	-9	12925	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCTGCCTCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	34107054	34101900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_34102426_34102723_34102880_34106908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006775	chr13	-	230	2	NNC	ENSMUSG00000060147.16	novel	1547	7	NA	NA	17191	-346	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGGAATGTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	34102788	34102255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_34102426_34102728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006776	chr13	-	427	3	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	10566	805	10566	-805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGCCTTGATGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34109413	34102714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_34102880_34106908_34107052_34109294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006777	chr13	-	362	3	ISM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	5808	5062	5808	-5062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACTGGGAGAAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	34114171	34106971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_34107052_34109294_34109413_34114007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006778	chr13	-	586	4	NNC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	256	-7417	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAACACCTGGGTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	34119723	34109326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_34109413_34114007_34114161_34115454_34115630_34119551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006779	chr13	-	474	3	ISM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	24	12214	24	-12205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGGCTTCCAGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34120157	34114114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_34114161_34115454_34115630_34119904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006780	chr13	+	211	2	NNC	ENSMUSG00000085457.4	novel	397	2	NA	NA	-4058	-625	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTATGGGGGGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34115491	34119988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_34115624_34119909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006781	chr13	+	372	2	ISM	ENSMUSG00000046949.17	ENSMUST00000222740.2	995	7	15306	43	15306	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGAGTGTCTTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34166441	34169579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_34166533_34169298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006782	chr13	+	343	1	ISM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	23414	0	20948	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTCTCATTTATATC	NA	NA	NA	NA	NA	NA	NA	NA	34172083	34172426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_34172100_34172400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006783	chr13	+	1401	3	ISM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	25811	0	25300	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAGTGTGCTGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	34212156	34217660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_34212235_34214022_34214164_34216478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006784	chr13	+	2858	1	FSM	ENSMUSG00000091462.3	ENSMUST00000163843.3	511	1	-234	-2113	-234	2113	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAGGCTTGCTACCATT	NA	NA	NA	NA	NA	NA	NA	NA	34218274	34221132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_34218300_34221100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006785	chr13	-	322	1	Genic_Genomic	ENSMUSG00000058672.8	novel	NA	NA	NA	NA	3413	1	mono-exon	FALSE	NA	NA	NA	NA	NA	517	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTTTTCTCTTCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	34258577	34258255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_34258300_34258600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006786	chr13	-	638	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	-1	973	-1	-973	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTGCACCAGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	34261991	34259229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006787	chr13	+	222	2	Antisense	novelGene_ENSMUSG00000058672.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAAGACAATCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	34260159	34260642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr13_+_34260274_34260534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006788	chr13	-	752	1	Genic_Genomic	ENSMUSG00000045136.7	novel	NA	NA	NA	NA	2856	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTACACACGCTCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	34311481	34310729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_34310700_34311500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006789	chr13	-	875	3	ISM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	1041	1088	1041	-1088	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGATGAGCAGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	34313296	34311818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_34312515_34312854_34312966_34313228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006790	chr13	+	476	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCTTCATTTTACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34346945	34362152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_34347233_34361963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006791	chr13	+	552	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTTTACTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34346949	34362156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_34347233_34350043_34350120_34361963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006792	chr13	+	548	3	FSM	ENSMUSG00000071451.11	ENST00000419065.6	547	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTATATAAATGACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	34347026	34362109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_34347233_34350043_34350199_34361922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006793	chr13	-	2119	5	ISM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	107356	0	107356	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCCTGTACCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	34381890	34365671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006794	chr13	-	239	1	ISM	ENSMUSG00000021411.17	ENSMUST00000053459.15	2684	5	25414	0	25414	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATGTTTGTGTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34812055	34811816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_34811800_34812100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006795	chr13	-	253	2	ISM	ENSMUSG00000021411.17	ENSMUST00000053459.15	2684	5	1124	11195	1124	-11195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATCAGCATGCCGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34836345	34823011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_34823082_34836162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006796	chr13	+	2228	1	ISM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	28535	0	28535	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	35087819	35090047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_35087800_35090000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006797	chr13	-	212	1	Genic_Genomic	ENSMUSG00000021417.16	novel	NA	NA	NA	NA	16174	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGAATTCATGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	35161941	35161729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_35161700_35161900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006798	chr13	-	846	6	ISM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	5778	-9	5778	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	35172337	35161730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006799	chr13	-	236	2	ISM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	3771	10541	3771	-10541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGTTTTCACAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	35174344	35172280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_35172336_35174163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006800	chr13	-	307	1	ISM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	12581	0	12549	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATTTTGTGTATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	36077761	36077454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_36077500_36077800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006801	chr13	-	702	5	ISM	ENSMUSG00000021418.16	ENST00000618533.4	969	7	2569	0	2569	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAAAGTTTATAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	36087741	36080707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085995_36086092_36087670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006802	chr13	-	694	5	NNC	ENSMUSG00000021418.16	novel	969	7	NA	NA	2575	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAAAGTTTATAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	36087735	36080707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_36080909_36082547_36082683_36082797_36082991_36085991_36086092_36087670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006803	chr13	-	2042	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	45	-1	45	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCCAGCTAAACTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	36301464	36162376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_36163891_36276788_36276910_36301057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006804	chr13	-	1517	1	Genic_Genomic	ENSMUSG00000046573.8	novel	NA	NA	NA	NA	137616	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCCAGCTAAACTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	36163893	36162376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_36162400_36163900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006805	chr13	-	351	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTGAAATGGGAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	36174527	36174176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr13_-_36174200_36174500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006806	chr13	+	1356	3	ISM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	2	305332	2	-305248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTGTGACACATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36301396	36416235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_36301989_36388491_36389125_36416104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006807	chr13	-	460	1	ISM	ENSMUSG00000039114.17	ENSMUST00000224323.2	1779	3	4596	264	4584	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTGTCGTTTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	36910058	36909598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_36909600_36910100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006808	chr13	-	650	3	FSM	ENSMUSG00000039114.17	ENSMUST00000037623.15	1619	3	89	880	89	-47	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCATATGGGATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36918362	36910478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_36910831_36914080_36914226_36918209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006809	chr13	+	5932	3	FSM	ENSMUSG00000039087.18	ENST00000611109.1	3551	3	-1444	-937	-1444	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTCTTGTGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38113757	38135035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_38116466_38130832_38131640_38132618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006810	chr13	+	2037	2	ISM	ENSMUSG00000039087.18	ENST00000611109.1	3551	3	15616	265	15616	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTGGAGGTCATATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	38130817	38133833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_38131640_38132618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006811	chr13	-	124	1	ISM	ENSMUSG00000021427.11	ENSMUST00000225246.2	1825	10	26857	572	26783	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCTCTTACAGCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	38151276	38151152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_38151200_38151300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006812	chr13	-	141	2	ISM	ENSMUSG00000021427.11	ENST00000650389.1	1306	10	16322	221	16240	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCGGAAGTTGCTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	38161819	38151374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_38151460_38161763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006813	chr13	-	460	1	ISM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	22357	0	22223	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGCCTCCAAAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	38155836	38155376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_38155400_38155800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006814	chr13	-	126	2	ISM	ENSMUSG00000021427.11	ENST00000650389.1	1306	10	14359	10609	14277	1767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTATTTAGCAGAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	38163782	38161762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_38161825_38163718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006815	chr13	-	662	4	ISM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	8166	7994	8032	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTTTTGACCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	38170027	38163370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006816	chr13	-	1111	8	NNC	ENSMUSG00000021427.11	novel	1114	8	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38178119	38163528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_38163783_38167364_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006817	chr13	-	2075	5	ISM	ENSMUSG00000038991.18	ENSMUST00000160653.2	2586	10	19932	-196	19932	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCTTACTTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	38691958	38684052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006818	chr13	-	1633	1	Genic_Genomic	ENSMUSG00000038991.18	novel	NA	NA	NA	NA	26205	2	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCTTACTTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	38685685	38684052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_38684100_38685700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006819	chr13	-	1711	2	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	24401	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTCTTACTTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	38687489	38684053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_38685678_38687402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006820	chr13	-	1668	4	NNC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	20834	-110	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCCAGCTCACAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	38691056	38684358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_38685685_38687406_38687537_38688702_38688783_38690924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006821	chr13	-	1705	1	Genic_Genomic	ENSMUSG00000038982.11	novel	NA	NA	NA	NA	34524	8	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTGTGTTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	38784513	38782808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_38782800_38784500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006822	chr13	-	1668	2	ISM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	22408	3579	22360	-3579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATAGCTGCTGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	38796677	38786395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_38788005_38796618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006823	chr13	-	2068	1	Genic_Genomic	ENSMUSG00000001707.9	novel	NA	NA	NA	NA	12785	1	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGGTGACAACCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	38830249	38828181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_38828200_38830200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006824	chr13	-	2306	3	ISM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	2816	97	2816	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCATACTGACTCACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38840218	38828279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_38830287_38838971_38839068_38840015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006825	chr13	+	673	3	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	3	4878	3	-4878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCACATGCTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	41154501	41161613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_41154890_41158212_41158376_41161491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006826	chr13	+	872	5	ISM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	8243	0	8243	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTTAATTACATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	41162741	41166491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006827	chr13	+	452	1	NIC	ENSMUSG00000038683.17	novel	1722	10	NA	NA	11541	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTTAATTACATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	41166039	41166491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_41166000_41166500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006828	chr13	+	808	5	ISM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	822	0	822	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCGTCTTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	41170589	41176062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006829	chr13	-	527	3	ISM	ENSMUSG00000021363.15	ENST00000536370.6	2064	12	30690	0	30681	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAGACGCACACAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	41193254	41179793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_41180039_41188229_41188362_41193104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006830	chr13	-	564	3	ISM	ENSMUSG00000021363.15	ENST00000313243.6	2182	13	24132	13376	24125	-13376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAACTTGTCAACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	41199810	41193169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_41193254_41195494_41195662_41199497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006831	chr13	-	565	3	ISM	ENSMUSG00000021363.15	ENST00000313243.6	2182	13	21049	19726	21042	-19726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATCATCAAAACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	41202893	41199519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_41199807_41201528_41201697_41202783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006832	chr13	-	1000	1	ISM	ENSMUSG00000021365.16	ENSMUST00000021794.14	4871	8	176387	326	48341	13	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATTTTTTTAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	41464382	41463382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_41463400_41464400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006833	chr13	-	1073	2	ISM	ENSMUSG00000021365.16	ENSMUST00000163623.3	4626	7	44798	1262	44798	-1262	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACACGGTGGTAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	41467925	41464657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_41465647_41467841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006834	chr13	+	635	2	FSM	ENSMUSG00000097373.2	ENSMUST00000180728.2	633	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTGGTTCATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	41513446	41524386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_41513607_41523911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006835	chr13	+	2422	4	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	35148	17366	35148	-17363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCCTGCTCCGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	42311781	42321139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006836	chr13	+	2135	2	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	58272	-1	58272	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTTACGTCTCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	42334905	42338506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_42335402_42336867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006837	chr13	+	1464	4	ISM	ENSMUSG00000021367.9	ENSMUST00000021796.9	2139	5	2077	196	2077	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTTATTTTTTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	42457028	42461270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_42457202_42458421_42458581_42458730_42458845_42460252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006838	chr13	+	782	4	ISM	ENSMUSG00000054728.18	ENST00000675203.1	2162	13	120911	57342	-85411	-57213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACGGGGGGGGCGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	43190921	43231452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_43191007_43210654_43210823_43213046_43213254_43231130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006839	chr13	-	656	4	ISM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	12083	0	11947	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTGGCCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	43312877	43305215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006840	chr13	+	546	4	ISM	ENSMUSG00000054021.7	ENSMUST00000221515.2	1793	9	5060	6604	0	-6604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCCAGCTTTAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	43524221	43533211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_43524345_43525307_43525442_43530170_43530397_43533148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006841	chr13	+	501	4	ISM	ENSMUSG00000054021.7	ENSMUST00000221515.2	1793	9	6146	5787	1086	-5787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTAGGTAAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	43525307	43534028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_43525442_43530170_43530397_43533148_43533237_43533975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006842	chr13	+	554	5	ISM	ENSMUSG00000054021.7	ENST00000680402.1	806	7	5944	0	5944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTCTTAACCGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	43530165	43548277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_43530397_43533148_43533237_43533975_43534030_43538973_43539090_43548212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006843	chr13	+	1384	4	ISM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	2461	0	2459	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGACATGTAATACTGT	NA	NA	NA	NA	NA	NA	NA	NA	43554326	43556337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_43554411_43554772_43554895_43554975_43555054_43555237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006844	chr13	-	379	1	NIC	ENSMUSG00000057531.15	novel	1589	10	NA	NA	79379	2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCAGCTGGTGAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	45075931	45075552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_45075600_45075900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006845	chr13	-	598	3	ISM	ENSMUSG00000057531.15	ENSMUST00000220555.2	1589	10	70681	84	70681	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTTCAATTTTACACA	NA	NA	NA	NA	NA	NA	NA	NA	45084629	45075634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_45075931_45076624_45076769_45084471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006846	chr13	-	701	6	ISM	ENSMUSG00000057531.15	ENST00000338950.9	831	8	9923	0	9762	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGGGTAAGAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	45145548	45076632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_45076769_45084471_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45145494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006847	chr13	-	551	5	ISM	ENSMUSG00000057531.15	ENST00000355917.7	780	7	8252	7858	8091	-7858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCGCAGAGAGGCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	45147219	45084490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45147160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006848	chr13	-	506	1	FSM	ENSMUSG00000078915.3	ENSMUST00000109187.3	630	1	299	-175	299	175	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGTTGACCTTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	45232304	45231798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_45231800_45232300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006849	chr13	+	223	1	ISM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	22058	0	20873	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCTTTGTGATCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	45565275	45565498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_45565300_45565500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006850	chr13	-	1944	1	ISM	ENSMUSG00000046876.17	ENSMUST00000091628.11	10569	8	413278	0	413259	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGCCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	45705174	45703230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_45703200_45705200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006851	chr13	-	3113	2	ISM	ENSMUSG00000046876.17	ENSMUST00000167708.4	3751	7	396719	-290	396719	290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATCAGGTTACTTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	45721714	45709614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_45711062_45720048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006852	chr13	+	341	2	FSM	ENSMUSG00000038152.5	ENSMUST00000038032.5	729	2	25	363	25	-363	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCGAAAGAAGAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	46118753	46119621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_46118860_46119386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006853	chr13	+	319	1	ISM	ENSMUSG00000038152.5	ENSMUST00000038032.5	729	2	937	0	937	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTGGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46119665	46119984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_46119700_46120000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006854	chr13	+	329	1	Genic_Genomic	ENSMUSG00000069237.9	novel	NA	NA	NA	NA	8208	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAACAGTGTTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46831205	46831534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_46831200_46831500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006855	chr13	-	337	3	FSM	ENSMUSG00000021375.12	ENST00000502704.2	336	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGAGCCTAGAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	47083247	47068675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_47068717_47082691_47082783_47083042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006856	chr13	-	1311	1	ISM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	18357	0	18271	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGAGCTTGGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	47178329	47177018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_47177000_47178300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006857	chr13	-	1406	3	ISM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	14243	660	14157	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTACTTGCTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	47182443	47177678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_47178954_47180727_47180773_47182357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006858	chr13	+	1477	3	ISM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	35727	1155	35727	-1155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACAGTCTAGATACACTC	NA	NA	NA	NA	NA	NA	NA	NA	47232701	47237600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_47232776_47233911_47234065_47236350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006859	chr13	+	1417	1	ISM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	40364	0	40364	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGTTTTTGAAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	47237338	47238755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_47237300_47238800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006860	chr13	-	789	1	Genic_Genomic	ENSMUSG00000021377.16	novel	NA	NA	NA	NA	20621	1	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGTATTTAATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	47239045	47238256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_47238300_47239000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006861	chr13	-	1094	4	ISM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	17611	525	17611	-525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATCACAGCTTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	47242055	47238782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006862	chr13	-	2526	4	ISM	ENSMUSG00000038025.9	ENST00000610682.1	2868	8	64868	-1	64868	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCATGTGTCTGTCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	48959392	48955227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006863	chr13	+	546	3	ISM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	0	1187	0	-1187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGCAGGGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	49340960	49348533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49341114_49347211_49347441_49348369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006864	chr13	-	390	2	Antisense	novelGene_ENSMUSG00000037966.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGAGCAAGGCGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	49348531	49347210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr13_-_49347437_49348367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006865	chr13	+	755	3	ISM	ENSMUSG00000037966.16	ENSMUST00000120733.8	1321	5	6225	265	6225	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGGAGCCTGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	49347225	49349455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49347441_49348369_49348534_49349079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006866	chr13	+	419	1	ISM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	8341	0	8301	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGTTCCATGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	49349301	49349720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49349300_49349700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006867	chr13	-	574	4	ISM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	10679	-1	10679	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	49358823	49356425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006868	chr13	-	296	3	ISM	ENSMUSG00000021384.15	ENST00000375469.5	456	4	1706	0	1706	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACCCTAGTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	49392421	49390899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_49390935_49390984_49391089_49392264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006869	chr13	-	292	3	NNC	ENSMUSG00000021384.15	novel	456	4	NA	NA	1713	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACCCTAGTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	49392414	49390899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_49390935_49390981_49391089_49392264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006870	chr13	-	480	4	FSM	ENSMUSG00000021384.15	ENST00000375472.8	479	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACCCTAGTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	49394151	49390899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_49390935_49390984_49391089_49392264_49392413_49393958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006871	chr13	+	1805	1	ISM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	43626	0	43626	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCCCTCTGTGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	49538697	49540502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49538700_49540500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006872	chr13	+	792	2	ISM	ENSMUSG00000021385.11	ENSMUST00000021817.10	2856	13	37031	624	37031	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATTGGTTCTGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	49612120	49615753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49612169_49615009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006873	chr13	+	834	1	FSM	ENSMUSG00000113255.2	ENSMUST00000222404.2	3272	1	334	2104	334	-2104	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTCAATTTCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	49647127	49647961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_49647100_49648000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006874	chr13	+	1188	2	ISM	ENSMUSG00000021388.15	ENSMUST00000021820.14	2310	8	19352	0	19352	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTGGTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	49717314	49721041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49717371_49719909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006875	chr13	+	1518	2	ISM	ENSMUSG00000048368.10	ENSMUST00000065494.8	1556	3	6689	-3	6689	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTTGTATATTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	49742930	49746088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49743892_49745531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006876	chr13	+	423	3	ISM	ENSMUSG00000021390.7	ENSMUST00000021822.7	2566	7	1	13103	1	-11981	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAACAATCTATCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	49761522	49764874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49761603_49762589_49762834_49764775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006877	chr13	+	543	2	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	17	14041	17	-14041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGGAAAAGTATTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	49761558	49762814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49761679_49762391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006878	chr13	+	901	4	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	850	5081	850	-5081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTCCATAATATGACTA	NA	NA	NA	NA	NA	NA	NA	NA	49762391	49771774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49762834_49764775_49764870_49769030_49769190_49771568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006879	chr13	+	863	4	ISM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	7488	163	7488	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCTAAATAGCATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	49769029	49776692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49769190_49771568_49771772_49774488_49774585_49776288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006880	chr13	+	470	1	ISM	ENSMUSG00000021390.7	ENSMUST00000021822.7	2566	7	14867	1119	14847	3	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCCCAGTGACCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	49776388	49776858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49776400_49776900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006881	chr13	+	394	1	Genic_Genomic	ENSMUSG00000021390.7	novel	NA	NA	NA	NA	16046	4	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAGTATGCCTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	49777587	49777981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_49777600_49778000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006882	chr13	+	393	1	ISM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	51775	0	46482	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	49887350	49887743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_49887400_49887700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006883	chr13	+	1100	2	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	43437	2704	43437	-2704	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGCTGAGTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	51298352	51303878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_51298572_51302997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006884	chr13	+	970	1	Genic_Genomic	ENSMUSG00000021395.12	novel	NA	NA	NA	NA	50699	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTGTGAACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51305614	51306584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_51305600_51306600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006885	chr13	+	294	2	ISM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	72	950	72	-950	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGCTTTGCTGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	51799339	51803746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_51799508_51803620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006886	chr13	+	296	2	ISM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	4367	142	4367	-142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGAGCTCAGTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	51803634	51804554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_51803749_51804372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006887	chr13	+	699	2	ISM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	30745	260	30701	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAGGATTTGCTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	51836477	51837820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_51836670_51837313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006888	chr13	+	701	1	ISM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	31647	0	31603	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	51837379	51838080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_51837400_51838100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006889	chr13	+	1086	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	-6	-9	-6	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCTTTTTATTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	52000707	52002513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006890	chr13	+	1065	4	NNC	ENSMUSG00000021453.3	novel	1071	4	NA	NA	11	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCCTTTTTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	52000724	52002511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_52000869_52001387_52001488_52001591_52001806_52001904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006891	chr13	+	1002	4	NNC	ENSMUSG00000021453.3	novel	1071	4	NA	NA	21	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGCCTTTTTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	52000782	52002511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_52000869_52001394_52001490_52001591_52001806_52001904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006892	chr13	+	777	3	ISM	ENSMUSG00000021453.3	ENST00000375769.1	914	4	416	0	416	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAAGGGGGTCTGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	52001177	52002155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_52001490_52001591_52001806_52001904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006893	chr13	-	2250	1	ISM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	20360	0	20247	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGCTGCTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	53063330	53061080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53061100_53063300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006894	chr13	-	2256	2	ISM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	10565	104	10452	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGGTTCCCAGCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	53073125	53061184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53063352_53073036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006895	chr13	-	887	1	Genic_Genomic	ENSMUSG00000021460.18	novel	NA	NA	NA	NA	18448	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGGTCACAGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	53065129	53064242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_53064200_53065100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006896	chr13	-	879	2	ISM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	10592	2062	10452	-2062	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGCTGGGATTAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	53073125	53066307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53067098_53073036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006897	chr13	-	1450	1	ISM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	12415	0	12415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCTGTTCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	53122694	53121244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53121200_53122700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006898	chr13	-	1575	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	28	423	28	-423	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGTGTGGTGGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	53135081	53121667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_53123058_53134896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006899	chr13	+	167	1	ISM	ENSMUSG00000113101.2	ENSMUST00000222317.2	257	2	1817	0	1817	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTGTAGCAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53172054	53172221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_53172100_53172200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006900	chr13	-	214	1	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	44436	0	44436	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTTTGGATAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	53486997	53486783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53486800_53487000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006901	chr13	-	226	2	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	41980	1081	41980	-1081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCCCAGGGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	53489453	53487864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53488014_53489376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006902	chr13	-	176	2	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	35168	4860	35168	-4860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATACAGTTATACAG	NA	NA	NA	NA	NA	NA	NA	NA	53496265	53491643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53491762_53496207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006903	chr13	-	213	3	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	33523	9459	33523	-9459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGCCAGAACATCCA	NA	NA	NA	NA	NA	NA	NA	NA	53497910	53496242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53496263_53497163_53497261_53497814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006904	chr13	-	210	2	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	32483	11031	32483	-11031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGCCTCTTAGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	53498950	53497814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53497911_53498836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006905	chr13	-	190	2	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	25707	12061	25707	-12061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCAGTGTGAGTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	53505726	53498844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53498945_53505636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006906	chr13	-	282	3	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	18577	18851	18577	-18851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCTGCGGTAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	53512856	53505634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53505727_53508186_53508317_53512796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006907	chr13	-	220	2	NNC	ENSMUSG00000021468.9	novel	2606	15	NA	NA	18502	-21446	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAGCGACTGCTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	53512931	53508229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_53508317_53512798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006908	chr13	-	209	2	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	10011	26012	10011	-26012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCGCTCTCACCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	53521422	53512795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53512930_53521347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006909	chr13	-	191	2	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	3973	35117	3973	-35117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAACAATGAATGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	53527460	53521900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_53521996_53527364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006910	chr13	+	1358	2	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	33872	533	33872	-533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTTTCAGAAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	54259759	54261828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_54259815_54260525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006911	chr13	+	1312	1	Genic_Genomic	ENSMUSG00000021474.10	novel	NA	NA	NA	NA	35166	4	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTTACTTGTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	54261053	54262365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_54261100_54262400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006912	chr13	-	1864	4	ISM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	2470	0	2470	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGTCTAAAGTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	54614192	54606649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006913	chr13	-	323	1	FSM	ENSMUSG00000086567.2	ENSMUST00000140330.2	385	1	170	-108	170	108	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTCTACAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	54647732	54647409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_54647400_54647700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006914	chr13	-	1293	1	Genic_Genomic	ENSMUSG00000025871.19	novel	NA	NA	NA	NA	6812	1	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTTGTCCATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	54700322	54699029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_54699000_54700300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006915	chr13	-	1659	4	ISM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	8648	312	2666	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTCACATGAACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	54704468	54699347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006916	chr13	-	226	1	NIC	ENSMUSG00000025871.19	novel	2727	9	NA	NA	6501	1	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAACTTCCCTGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54700633	54700407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_54700400_54700600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006917	chr13	-	736	5	FSM	ENSMUSG00000025871.19	ENST00000620366.4	723	5	-13	0	-13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAACTTCCCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	54707147	54700408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_54700631_54700705_54700851_54701010_54701118_54704339_54704465_54707010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006918	chr13	-	212	2	ISM	ENSMUSG00000025871.19	ENST00000620366.4	723	5	6067	287	6067	-269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACCATCAAGGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	54701067	54700695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54700851_54701010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006919	chr13	-	179	2	NNC	ENSMUSG00000025871.19	novel	723	5	NA	NA	43	-3935	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTGGCAGAAGCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	54707091	54704361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_54704460_54707010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006920	chr13	-	392	3	ISM	ENSMUSG00000025871.19	ENST00000434580.1	910	7	2337	3951	-19	-3951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGACCAAGTACCTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	54709687	54704377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54704465_54707010_54707134_54709505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006921	chr13	-	278	2	ISM	ENSMUSG00000025871.19	ENST00000614420.4	889	6	12	6602	12	-6584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGCCCTTCAGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	54709656	54707010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54707138_54709505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006922	chr13	-	206	2	ISM	ENSMUSG00000025871.19	ENST00000434580.1	910	7	0	9079	0	-9079	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTCACCCTGCTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	54712024	54709505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54709685_54711997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006923	chr13	-	258	2	ISM	ENSMUSG00000025871.19	ENST00000393725.6	1014	7	0	9127	0	-9109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGCGCAAGTATCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	54712436	54709535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54709685_54712327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006924	chr13	-	153	2	NNC	ENSMUSG00000025871.19	novel	1014	7	NA	NA	4	-9207	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTCGGGCATTCAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	54712432	54709633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_54709685_54712330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006925	chr13	-	613	1	Genic_Genomic	ENSMUSG00000025869.12	novel	NA	NA	NA	NA	5200	1	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGCACTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	54732609	54731996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_54732000_54732600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006926	chr13	-	748	3	ISM	ENSMUSG00000025869.12	ENSMUST00000148222.2	790	6	1389	320	1327	-320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAATATTTTACCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	54736482	54732668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54733238_54733632_54733740_54736410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006927	chr13	-	424	4	ISM	ENSMUSG00000025869.12	ENSMUST00000148222.2	790	6	64	1280	2	-1280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGCCCACAGGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	54737807	54733628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54733740_54736410_54736481_54737475_54737585_54737673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006928	chr13	+	455	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	4	189	4	-189	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTTCAGACCGGACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	54738023	54738782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_54738233_54738536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006929	chr13	+	293	1	ISM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	659	0	659	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCTTAATCTCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	54738678	54738971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_54738700_54739000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006930	chr13	-	2187	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAGACTGTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	54759157	54740212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006931	chr13	-	2035	1	ISM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	6375	0	6353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54829246	54827211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54827200_54829200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006932	chr13	-	2137	3	ISM	ENSMUSG00000034928.17	ENST00000274811.9	4111	11	5618	419	5618	-417	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCTGTGTTCTGTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	54829981	54827643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_54829625_54829746_54829847_54829925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006933	chr13	+	1080	5	ISM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	3818	2	3600	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGTTTATGTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	54941007	54944587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006934	chr13	-	662	1	ISM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	71754	0	48913	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTGTCTGTTTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	55176354	55175692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55175700_55176400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006935	chr13	+	709	2	Antisense	novelGene_ENSMUSG00000025878.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAACAAGTGATCCCATA	NA	NA	NA	NA	NA	NA	NA	NA	55223204	55224220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr13_+_55223814_55224120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006936	chr13	+	270	1	FSM	ENSMUSG00000094446.2	ENSMUST00000075962.9	483	1	344	-131	344	131	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAATTTTTCTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55233933	55234203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55233900_55234200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006937	chr13	+	294	2	FSM	ENSMUSG00000021481.12	ENST00000512315.5	282	2	-5	-7	1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTCGGAAGTTCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	55253140	55278449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55253332_55278346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006938	chr13	+	274	2	NNC	ENSMUSG00000021481.12	novel	282	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAAGTCCTTCGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55253145	55278442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_55253332_55278354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006939	chr13	+	259	2	ISM	ENSMUSG00000021481.12	ENST00000506693.5	516	3	79	8196	79	-8196	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACACAGGAAGCAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	55253224	55270246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55253332_55270094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006940	chr13	+	926	3	ISM	ENSMUSG00000021481.12	ENSMUST00000159147.8	1146	6	17077	-292	17077	292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTGCTATGTTCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	55270222	55280845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55270329_55278346_55278441_55280119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006941	chr13	+	99	1	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	25198	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAAGTCCTTCGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55278343	55278442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_55278300_55278400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006942	chr13	+	807	1	ISM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	28692	0	28686	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCGATGTGTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	55281831	55282638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55281800_55282600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006943	chr13	+	226	2	ISM	ENSMUSG00000021488.9	ENSMUST00000224693.2	852	6	1986	6817	1986	-6816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACTTACAGTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	55361873	55381843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55361964_55381707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006944	chr13	+	175	1	ISM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	28854	0	28598	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55388485	55388660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55388500_55388700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006945	chr13	-	620	5	ISM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	943	0	943	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	55468815	55467697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006946	chr13	+	1142	4	ISM	ENSMUSG00000021486.8	ENST00000503216.5	752	5	-481	348	-481	-348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACTGTGTCAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	55469382	55472429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006947	chr13	+	1056	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1588	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55469900	55473085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006948	chr13	+	389	4	ISM	ENSMUSG00000021486.8	ENST00000503216.5	752	5	934	0	934	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATAACTCGCTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55470797	55472777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55470892_55472143_55472258_55472339_55472419_55472675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006949	chr13	-	1037	3	ISM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	1270	-3	1270	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTACAGTCTATCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	55476301	55472977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55473712_55473825_55474010_55476182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006950	chr13	-	421	1	Genic_Genomic	ENSMUSG00000021484.9	novel	NA	NA	NA	NA	18531	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGTTGTGTGCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55492065	55491644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_55491600_55492100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006951	chr13	-	775	4	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	11240	2829	11240	-2829	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCTAGCTCTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	55499356	55494474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006952	chr13	-	406	4	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	9717	7395	9717	-7395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATCACAGGGGTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	55500879	55499040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55499084_55499192_55499355_55499523_55499604_55500758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006953	chr13	-	626	3	ISM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	8	9112	8	-9112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGGGGCACGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55510588	55500757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55500877_55509933_55510053_55510200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006954	chr13	-	826	1	Genic_Genomic	ENSMUSG00000034675.18	novel	NA	NA	NA	NA	13808	1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGGGCCTGCTGCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	55622066	55621240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_55621200_55622100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006955	chr13	-	1541	3	ISM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	12572	107	12522	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTCTCTGCTTGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	55623352	55621348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55622107_55622268_55622372_55622672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006956	chr13	-	901	3	ISM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	11792	1080	11742	-565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGCCATGTGCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	55624132	55622321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55622372_55622672_55623350_55623958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006957	chr13	-	930	4	ISM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	10230	1019	10230	-1019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCAGCTCTAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	55625644	55622775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55623350_55623958_55624130_55625363_55625494_55625589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006958	chr13	-	617	4	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	8729	-1	8717	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTGTGCCTCCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	55652530	55646227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006959	chr13	-	624	4	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	7277	508	7265	-508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGCATGACACATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55653982	55646736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55646823_55646913_55647035_55652470_55652652_55653746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006960	chr13	-	519	4	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	6081	6237	6069	2120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTGGCAGGTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	55655178	55652465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55652652_55653746_55653982_55654118_55654181_55655142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006961	chr13	-	538	5	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	5156	7534	5144	823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAAGATCATCCGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	55656103	55653762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006962	chr13	-	308	1	ISM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	6358	0	6354	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	55654893	55654585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55654600_55654900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006963	chr13	-	408	3	ISM	ENSMUSG00000021493.16	ENSMUST00000069929.13	899	8	5864	62	5864	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTACTGTCTGCCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	55655383	55654648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55654937_55655142_55655180_55655300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006964	chr13	-	321	2	NNC	ENSMUSG00000021493.16	novel	1915	5	NA	NA	4382	-746	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGCCCACCTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	55656865	55655332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_55655487_55656698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006965	chr13	-	355	3	NNC	ENSMUSG00000021493.16	novel	1915	5	NA	NA	1017	-803	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGATACCGAAGACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	55660230	55655389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_55655487_55656704_55656857_55660124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006966	chr13	-	313	3	ISM	ENSMUSG00000021493.16	ENSMUST00000069929.13	899	8	3	2129	3	-2129	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTAGCAGGTACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	55661244	55656715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55656857_55660124_55660232_55661179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006967	chr13	-	445	3	ISM	ENSMUSG00000035711.6	ENST00000377112.8	497	4	647	0	-82	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGCCGGGCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	55676433	55672031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55672205_55672293_55672394_55676261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006968	chr13	-	175	1	NIC	ENSMUSG00000035711.6	novel	1546	5	NA	NA	4145	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGCCGGGCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	55672206	55672031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_55672000_55672200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006969	chr13	-	278	3	ISM	ENSMUSG00000035711.6	ENST00000377112.8	497	4	12	296	12	-296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAACTCTATCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	55677068	55672327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55672394_55676261_55676433_55677027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006970	chr13	-	1180	3	ISM	ENSMUSG00000021495.11	ENSMUST00000225240.3	2950	9	27311	2308	27311	-2308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGACCCCAGCTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	55691602	55689436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55689535_55690394_55690471_55690596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006971	chr13	-	1450	3	ISM	ENSMUSG00000021495.11	ENST00000514747.6	2949	9	17759	3587	17757	-3587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGGAGCAGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	55701156	55690715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_55691603_55698036_55698218_55700774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006972	chr13	+	1420	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55740981	55745510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006973	chr13	+	2128	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	3	-1	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	55747880	55758256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006974	chr13	+	1195	4	ISM	ENSMUSG00000021504.15	ENSMUST00000100764.10	2195	5	4252	575	4083	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAAGATCTCAATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	55751960	55757681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55752196_55755009_55755236_55756154_55756239_55757031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006975	chr13	+	1386	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTCTGTACATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	55770817	55780228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006976	chr13	+	702	2	FSM	ENSMUSG00000021501.5	ENST00000676829.1	693	2	-4	-5	-4	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTAGATTGACTAATA	NA	NA	NA	NA	NA	NA	NA	NA	55770956	55780210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55771070_55779621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006977	chr13	+	683	2	NNC	ENSMUSG00000021501.5	novel	693	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGGAATTAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55770961	55780205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_55771070_55779630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006978	chr13	+	563	3	FSM	ENSMUSG00000021501.5	ENST00000514518.1	759	3	3	193	3	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGATTTCTCTTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	55770963	55780012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55771070_55776389_55776456_55779621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006979	chr13	+	683	2	NNC	ENSMUSG00000021501.5	novel	693	2	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGGAATTAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55770964	55780205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_55771070_55779627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006980	chr13	+	1192	4	FSM	ENSMUSG00000021501.5	ENST00000678771.1	1217	4	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGGAATTAGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55770985	55780205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55771070_55772526_55772985_55776389_55776456_55779621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006981	chr13	+	589	1	NIC	ENSMUSG00000021501.5	novel	1382	4	NA	NA	8658	2	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGAATTAGATTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	55779618	55780207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_55779600_55780200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006982	chr13	+	839	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	68	3745	68	-3745	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCACCCTGCACTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55841004	55847568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55841161_55846885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006983	chr13	+	714	1	ISM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	9663	0	9663	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	55850599	55851313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_55850600_55851300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006984	chr13	+	1526	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55862461	55874040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872456_55873485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006985	chr13	+	1528	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGGTTTCGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55862462	55874041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006986	chr13	+	1477	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55862506	55874040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006987	chr13	+	542	4	FSM	ENSMUSG00000021496.13	ENSMUST00000124968.8	546	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGTTATTTGTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	55875184	55924643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006988	chr13	-	505	3	FSM	ENSMUSG00000069223.11	ENSMUST00000152292.2	557	3	53	-1	27	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACGTTTTCTGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	55932265	55923758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_55924124_55931694_55931807_55932237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006989	chr13	-	494	1	ISM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	61519	0	54340	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGTTTTGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	56221925	56221431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56221400_56221900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006990	chr13	-	840	4	FSM	ENSMUSG00000015937.16	ENST00000423969.6	695	4	5	-150	5	150	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGTGTCTGACTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	56276260	56221801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56276089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006991	chr13	-	253	2	ISM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	31051	22538	23973	-22021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCTCCACCAAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	56252292	56243972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56244048_56252114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006992	chr13	-	511	3	ISM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	7048	30680	-30	-30163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGGATCTGGCAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	56276295	56252114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56252313_56252701_56252809_56276089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006993	chr13	-	495	3	ISM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	1	31268	1	-30751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGCAGGGGTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	56283342	56252702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56252809_56276089_56276295_56283158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006994	chr13	+	1375	6	FSM	ENSMUSG00000035509.18	ENST00000467490.5	1375	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCAGAGGGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	56674936	56693593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_56675095_56675530_56675654_56680105_56680419_56684449_56684771_56685377_56685575_56693330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006995	chr13	+	605	2	ISM	ENSMUSG00000021540.17	ENSMUST00000109874.2	4534	7	19823	12802	19823	-12458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAACGCCACGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	56871303	56875315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_56871810_56875216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006996	chr13	-	166	1	ISM	ENSMUSG00000021541.15	ENSMUST00000022023.13	3483	12	121808	651	121808	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGACTGCCCGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	56921742	56921576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56921600_56921700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006997	chr13	-	160	2	ISM	ENSMUSG00000021541.15	ENSMUST00000174457.9	2667	11	113145	2351	113145	-2351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGGAGAGAGGCCCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	56930405	56923927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56924006_56930323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006998	chr13	-	253	2	ISM	ENSMUSG00000021541.15	ENSMUST00000174457.9	2667	11	106018	9946	106018	-9946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGCCTCATAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	56937532	56931522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56931658_56937414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000006999	chr13	-	217	2	ISM	ENSMUSG00000021541.15	ENSMUST00000174457.9	2667	11	91077	15965	91077	-15965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACGACCACAAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	56952473	56937541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56937611_56952325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007000	chr13	-	163	2	ISM	ENSMUSG00000021541.15	ENSMUST00000174457.9	2667	11	85251	30954	85251	-30954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGTCCTCAGCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	56958299	56952530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56952591_56958196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007001	chr13	-	160	2	ISM	ENSMUSG00000021541.15	ENSMUST00000174457.9	2667	11	73212	36795	73212	-36795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTGGAACCTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	56970338	56958371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56958431_56970237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007002	chr13	-	164	2	ISM	ENSMUSG00000021541.15	ENST00000352189.8	2531	10	8398	48762	8351	-48762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCCCAATGAGACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	57035199	56970338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_56970455_57035151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007003	chr13	-	692	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	1986	0	1986	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATTGAGTGAGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	58274384	58273692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_58273700_58274400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007004	chr13	+	555	2	ISM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	2510	781	2510	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCGAGGGCAGGGATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	58307977	58311726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_58308053_58311246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007005	chr13	+	516	1	Genic_Genomic	ENSMUSG00000050002.15	novel	NA	NA	NA	NA	6527	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTTATACTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	58311994	58312510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_58312000_58312500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007006	chr13	-	1619	1	ISM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	37879	0	37845	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCGCCTCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	58325588	58323969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58324000_58325600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007007	chr13	-	1736	2	ISM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	36225	297	36225	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAGGTGAATTCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	58327208	58324273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58325843_58327041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007008	chr13	-	842	5	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	34628	97	34542	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATAGAAACACTAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	58468134	58438985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58439004_58440857_58441057_58442697_58442905_58451176_58451393_58467932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007009	chr13	-	1340	4	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10242	37803	10156	-37803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGGAGAAGCCCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58492520	58476691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58476840_58478732_58478940_58485356_58485501_58491679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007010	chr13	-	1307	3	ISM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	113	52915	27	-52915	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAGGAAGTCAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	58502649	58491803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58492639_58493442_58493644_58502378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007011	chr13	-	1334	1	NIC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	5577	2	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGGGGTTTTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58540292	58538958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_58539000_58540300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007012	chr13	-	1597	4	ISM	ENSMUSG00000021546.19	ENST00000376263.8	2723	14	6262	87	3895	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTGTGCCCAATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	58541974	58539047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007013	chr13	-	1892	6	NNC	ENSMUSG00000021546.19	novel	2723	14	NA	NA	3326	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTGTGCCCAATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	58542543	58539047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007014	chr13	-	1734	6	NNC	ENSMUSG00000021546.19	novel	2557	14	NA	NA	3268	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTTCTCTGTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58542601	58539203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541884_58541974_58542123_58542179_58542291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007015	chr13	-	428	4	ISM	ENSMUSG00000021546.19	ENST00000360384.9	1860	14	6262	393	3895	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTTCTGTTTAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	58541974	58540156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007016	chr13	-	370	3	ISM	ENSMUSG00000021546.19	ENSMUST00000177497.8	2585	12	3367	2817	3367	-2106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGTACATATTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	58542502	58541869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58541974_58542123_58542179_58542291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007017	chr13	-	552	3	ISM	ENSMUSG00000021546.19	ENSMUST00000177497.8	2585	12	2368	3238	2368	-2527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTATCCAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	58543501	58542290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58542600_58542978_58543108_58543387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007018	chr13	-	363	4	ISM	ENSMUSG00000021546.19	ENSMUST00000177497.8	2585	12	1172	3935	1172	1863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTGAGGTATCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	58544697	58542987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_58543108_58543387_58543502_58544001_58544074_58544640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007019	chr13	+	3666	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	54	135	54	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGCTGTACTAGA	NA	NA	NA	NA	NA	NA	NA	NA	58550130	58558827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_58550604_58554815_58554905_58555723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007020	chr13	+	1103	3	ISM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	1916	1209	-450	-1209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGAAGAGGCCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	58552429	58556697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_58552470_58554815_58554905_58555723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007021	chr13	+	3158	1	ISM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	5728	0	2925	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCGTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58555804	58558962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_58555800_58559000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007022	chr13	-	319	1	ISM	ENSMUSG00000021557.16	ENSMUST00000022040.14	8174	26	107283	3968	94411	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACATGGATTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	59597842	59597523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59597500_59597800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007023	chr13	-	377	2	ISM	ENSMUSG00000021557.16	ENST00000337006.8	4269	25	96683	391	83808	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTCTTGGTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	59608445	59597914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59598129_59608282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007024	chr13	-	255	2	ISM	ENSMUSG00000021557.16	ENSMUST00000164215.8	4331	25	82349	6619	82349	-6619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGACACTCTTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	59609904	59608282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59608444_59609810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007025	chr13	-	440	3	ISM	ENSMUSG00000021557.16	ENSMUST00000164215.8	4331	25	70622	8146	70622	-8146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACTGGGGGTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	59621631	59609809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59609988_59613798_59613931_59621501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007026	chr13	-	347	3	ISM	ENSMUSG00000021557.16	ENSMUST00000164215.8	4331	25	69764	12194	69764	-12194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCACACCCATGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	59622489	59613857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59613931_59621501_59621632_59622345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007027	chr13	-	304	2	ISM	ENSMUSG00000021557.16	ENSMUST00000164215.8	4331	25	68657	20682	68657	18868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTAAGCAGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	59623596	59622345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59622527_59623473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007028	chr13	-	300	2	ISM	ENSMUSG00000021557.16	ENSMUST00000164215.8	4331	25	67301	21809	67301	17741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTGTCTTCTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59624952	59623472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59623628_59624807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007029	chr13	-	309	2	ISM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	57048	3576	44201	-3576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGATTGCTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	59648052	59644789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59644874_59647827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007030	chr13	-	352	2	ISM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	52970	7074	40123	-7074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTCAGCCCACAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	59652130	59648287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59648517_59652007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007031	chr13	-	322	3	ISM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	44840	10810	31993	-10810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATGATTTTCAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	59660260	59652023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59652125_59655772_59655871_59660137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007032	chr13	-	425	3	ISM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	39596	18924	26749	-18924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGGTGGGCCATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	59665504	59660137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59660316_59661900_59662110_59665466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007033	chr13	-	345	3	ISM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	25208	34987	12361	3518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACTTAAAGGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	59679892	59676200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59676333_59678870_59679018_59679826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007034	chr13	-	462	4	ISM	ENSMUSG00000021557.16	ENST00000337006.8	4269	25	15	82300	1	-97	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGATTCCCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	59705113	59679823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59679891_59680985_59681054_59684062_59684188_59704911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007035	chr13	+	943	2	ISM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	47651	645	47651	-645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTCTTGGCCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	59780759	59783091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_59780843_59782231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007036	chr13	-	1724	1	Genic_Genomic	ENSMUSG00000021556.13	novel	NA	NA	NA	NA	39432	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCATCCTCTCTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59784162	59782438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_59782400_59784200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007037	chr13	+	936	1	Genic_Genomic	ENSMUSG00000021555.16	novel	NA	NA	NA	NA	49693	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGGAGCAGAAAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	59782801	59783737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_59782800_59783700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007038	chr13	-	1734	2	ISM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	37366	782	37366	-782	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGATTCCAGGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	59786228	59783591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59785216_59786118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007039	chr13	-	875	1	Genic_Genomic	ENSMUSG00000044792.8	novel	NA	NA	NA	NA	13528	1	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTTTTCTTGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	59904096	59903221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_59903200_59904100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007040	chr13	-	1063	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	148	731	148	-731	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCTCAGTTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	59917476	59903953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007041	chr13	-	857	2	NNC	ENSMUSG00000044792.8	novel	1942	4	NA	NA	10835	-821	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGGCCTGGGTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	59906789	59904043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_59904815_59906703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007042	chr13	-	1393	3	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	12883	-2	12883	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	59932661	59919689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_59920674_59929831_59930158_59932578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007043	chr13	-	1249	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	1714	-2	1290	2	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGCAGTTGCTTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	60323465	60322216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_60322200_60323500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007044	chr13	+	879	1	FSM	ENSMUSG00000114277.2	ENSMUST00000225897.2	220	1	-5	-654	-5	654	mono-exon	FALSE	NA	NA	NA	NA	NA	437	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATAGTGCCTGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	60789598	60790477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_60789600_60790500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007045	chr13	-	1242	4	ISM	ENSMUSG00000044258.11	ENSMUST00000021880.10	1373	5	548	-2	548	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCTAAATTGTTTAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	61083891	61081966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_61082843_61083143_61083267_61083360_61083484_61083771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007046	chr13	-	1191	4	NNC	ENSMUSG00000044258.11	novel	1373	5	NA	NA	600	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCCCTAAATTGTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	61083839	61081969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_61082843_61083143_61083267_61083360_61083484_61083767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007047	chr13	-	2292	1	FSM	ENSMUSG00000113841.2	ENSMUST00000221260.2	2293	1	2	-1	2	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTAAGTGGTCCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	62599421	62597129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_62597100_62599400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007048	chr13	-	2501	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	2	-11	2	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGTGGTTAAAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	62614644	62600818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007049	chr13	-	1007	1	ISM	ENSMUSG00000072066.8	ENSMUST00000201563.4	2640	3	18921	1242	2238	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTCAAATGTAAGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	62753075	62752068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_62752100_62753100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007050	chr13	-	2440	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	62832741	62819597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007051	chr13	+	622	3	ISM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	751	238446	518	-238446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTCTAAGGCTATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	63163498	63209024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_63163778_63180836_63181004_63208848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007052	chr13	-	411	2	Antisense	novelGene_ENSMUSG00000021458.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCTGTAAAGAGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	63216099	63208853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr13_-_63209031_63215865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007053	chr13	+	293	2	NNC	ENSMUSG00000021458.18	novel	3509	15	NA	NA	45907	-231449	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTGGGAACACACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	63208887	63216021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_63209013_63215853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007054	chr13	+	521	3	ISM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	53118	128619	52885	-128619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGTTAAGGTAAGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	63215865	63318851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_63216100_63304359_63304550_63318754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007055	chr13	+	396	4	ISM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	141638	108569	141405	-108569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCAGAACACTTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	63304385	63338901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_63304550_63318754_63318862_63338292_63338396_63338879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007056	chr13	+	258	3	ISM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	175543	100105	175310	-100105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTACCAGTATAGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	63338290	63347365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_63338396_63338879_63338988_63347320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007057	chr13	+	352	3	ISM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	267206	799	266973	-799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTCTCTTTTCTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	63429953	63446671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_63430073_63444671_63444759_63446525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007058	chr13	+	414	2	ISM	ENSMUSG00000021458.18	ENSMUST00000021911.15	2979	16	283542	240	283542	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGTCATTCAATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	63446522	63449858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_63446671_63449592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007059	chr13	+	302	1	ISM	ENSMUSG00000021458.18	ENSMUST00000021911.15	2979	16	286816	0	286816	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTGCTTCTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	63449796	63450098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_63449800_63450100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007060	chr13	-	1253	5	FSM	ENSMUSG00000021466.13	ENST00000468211.6	1251	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCATTTTTTTGAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	63721501	63692737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63720905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007061	chr13	-	1241	5	NNC	ENSMUSG00000021466.13	novel	1251	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCATTTTTTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	63721498	63692739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_63692935_63693050_63693121_63695809_63696000_63711436_63711630_63720905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007062	chr13	-	1222	5	NNC	ENSMUSG00000021466.13	novel	1251	5	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCATTTTTTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	63721481	63692739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_63692942_63693050_63693121_63695818_63696000_63711436_63711630_63720905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007063	chr13	-	1326	1	ISM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	18859	0	18859	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGGGTCATTCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	64282157	64280831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64280800_64282200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007064	chr13	-	1902	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	373	1257	373	-1257	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAAGTTTAGCTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	64300643	64282088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007065	chr13	+	775	4	ISM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	82	11679	39	-11059	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCGCAAGGATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	64309764	64322672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007066	chr13	+	1209	6	FSM	ENSMUSG00000021476.10	ENST00000375251.7	1257	6	48	0	48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTATGTGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	64309773	64333731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_64310149_64317827_64317991_64329920_64330093_64332386_64332573_64333086_64333337_64333668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007067	chr13	+	767	2	ISM	ENSMUSG00000021476.10	ENST00000375251.7	1257	6	22663	62	22663	-62	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAAGTGTACTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	64332388	64333669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_64332573_64333086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007068	chr13	+	751	1	ISM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	23918	0	23875	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTTATTCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	64333600	64334351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_64333600_64334400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007069	chr13	-	960	1	Genic_Genomic	ENSMUSG00000021482.11	novel	NA	NA	NA	NA	21955	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTCTGGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	64438569	64437609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_64437600_64438600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007070	chr13	-	1061	2	ISM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	15319	1508	15319	-1487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAGAAAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	64445205	64439118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64440043_64445068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007071	chr13	-	3294	1	FSM	ENSMUSG00000114072.2	ENSMUST00000221966.2	395	1	-889	-2010	-889	2010	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTGTGTACATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	64510440	64507146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_64507100_64510400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007072	chr13	-	4058	6	ISM	ENSMUSG00000021477.10	ENSMUST00000222517.2	6168	9	2650	1584	2066	-1584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCAGCATGTAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	64516054	64508734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007073	chr13	+	3042	6	FSM	ENSMUSG00000021483.9	ENST00000375871.8	856	6	0	-2186	0	-607	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACTTCTACAAGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	64580409	64588980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64585690_64585847_64586594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007074	chr13	+	858	6	NNC	ENSMUSG00000021483.9	novel	856	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTCCAGGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	64580411	64586794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_64580485_64580790_64580905_64583931_64584125_64584306_64584429_64585690_64585847_64586594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007075	chr13	+	184	2	ISM	ENSMUSG00000021483.9	ENST00000375883.7	980	7	3924	1503	3924	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCTGGGTACCCCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	64584333	64585291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_64584429_64585202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007076	chr13	+	193	2	ISM	ENSMUSG00000021483.9	ENST00000375883.7	980	7	4813	1015	4813	-1015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTTGGACCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	64585222	64585779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_64585327_64585690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007077	chr13	+	122	1	ISM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	6545	2793	6263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTCCAGGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	64586672	64586794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_64586700_64586800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007078	chr13	+	2372	1	ISM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	7088	0	6806	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTATGCTGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	64587215	64589587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_64587200_64589600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007079	chr13	-	197	1	NIC	ENSMUSG00000033063.9	novel	6344	24	NA	NA	123637	3	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTGTTATCTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	64911975	64911778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_64911800_64912000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007080	chr13	-	230	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	115778	149	115778	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGATTTCTCTGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	64919834	64911930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64912096_64919769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007081	chr13	-	382	3	ISM	ENSMUSG00000033063.9	ENST00000617422.4	2019	11	102451	8053	102451	-8053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGCACTGTGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	64933161	64919834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64919968_64920482_64920603_64933032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007082	chr13	-	306	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	99931	21251	99931	-21251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGAAGGCAATTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	64935681	64933032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64933174_64935516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007083	chr13	-	270	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	95403	23824	95403	-23824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGAAGTTTGGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	64940209	64935605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64935779_64940112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007084	chr13	-	303	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	94399	28346	94399	-28346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATCCTAATTAAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	64941213	64940127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64940260_64941042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007085	chr13	-	272	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	93505	29304	93505	-29304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATGTGAACAAGGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	64942107	64941085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64941228_64941977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007086	chr13	-	300	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	88583	30249	88583	-30249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATTGTTTTGGAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	64947029	64942030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64942182_64946880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007087	chr13	-	286	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	29034	35128	29034	-35128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGATAGAAGTATATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	65006578	64946909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_64947029_65006411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007088	chr13	-	235	2	ISM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	6	94689	6	-94689	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTCAGTGATGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	65035606	65006470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_65006606_65035506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007089	chr13	+	119	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCTCAAAAACTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	65062819	65062938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr13_+_65062800_65062900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007090	chr13	-	1319	1	ISM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	46994	0	9719	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTCTGAAGACTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	65213795	65212476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_65212500_65213800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007091	chr13	-	1449	3	ISM	ENSMUSG00000038212.17	ENST00000533726.1	958	7	5963	-1011	5963	-504	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTTGTTTTTGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	65217551	65213463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_65214676_65215676_65215820_65217457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007092	chr13	-	377	2	FSM	ENSMUSG00000074832.12	ENST00000244576.9	374	2	-2	-1	-2	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCACAATAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	66579770	66579224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_66579385_66579553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007093	chr13	-	229	1	ISM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	9686	1274	315	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCACAATAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	66579453	66579224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_66579200_66579500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007094	chr13	-	255	2	NNC	ENSMUSG00000074832.12	novel	374	2	NA	NA	125	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCTGTCACAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	66579643	66579225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_66579385_66579547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007095	chr13	-	292	2	NNC	ENSMUSG00000074832.12	novel	374	2	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCTGTCACAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	66579691	66579225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_66579395_66579568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007096	chr13	-	369	2	NNC	ENSMUSG00000074832.12	novel	374	2	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCTGTCACAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	66579763	66579225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_66579400_66579568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007097	chr13	-	271	2	NNC	ENSMUSG00000074832.12	novel	374	2	NA	NA	100	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCTGTCACAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	66579668	66579225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_66579400_66579571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007098	chr13	-	242	2	NNC	ENSMUSG00000074832.12	novel	374	2	NA	NA	216	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCTGTCACAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	66579552	66579225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_66579400_66579484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007099	chr13	-	536	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTATTTGAATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	67053442	67048679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007100	chr13	+	1651	3	FSM	ENSMUSG00000074826.11	ENSMUST00000099412.3	1652	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTATGTGTGTACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	67053479	67057230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_67053686_67055214_67055374_67055944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007101	chr13	-	765	5	ISM	ENSMUSG00000021519.12	ENST00000523821.5	1349	7	7375	-5	7375	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	67070895	67060181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_67060489_67062690_67062853_67064676_67064749_67065089_67065238_67070819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007102	chr13	-	772	4	ISM	ENSMUSG00000021519.12	ENST00000523821.5	1349	7	14	4930	14	-4930	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTTGAACTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	67078256	67065116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_67065238_67070819_67071010_67076233_67076387_67077948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007103	chr13	+	758	4	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	362	41894	362	-41894	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACTTGTTAGTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	67081255	67104571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007104	chr13	+	650	4	ISM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	54961	986	54961	-986	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCATTCAGATGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	67135854	67145479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_67135918_67142016_67142086_67143410_67143481_67145031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007105	chr13	+	518	1	Genic_Genomic	ENSMUSG00000021518.5	novel	NA	NA	NA	NA	65056	2	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTCTCTCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	67145949	67146467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_67145900_67146500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007106	chr13	-	2405	4	FSM	ENSMUSG00000058883.17	ENSMUST00000109742.11	2416	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	67229565	67217462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67229513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007107	chr13	-	2428	1	Genic_Genomic	ENSMUSG00000069206.15	novel	NA	NA	NA	NA	8725	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTGTCTGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67590977	67588549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_67588500_67591000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007108	chr13	-	2360	2	ISM	ENSMUSG00000069206.15	ENSMUST00000075255.6	3238	4	2707	639	2666	-639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCACATGTTTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	67597036	67589190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_67591454_67596939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007109	chr13	-	1951	1	ISM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	8446	0	8415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGTCATAGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	67665850	67663899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_67663900_67665800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007110	chr13	-	2022	2	ISM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	5456	406	5425	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAACTGAGAAGAAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	67668840	67664305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_67666232_67668744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007111	chr13	+	274	2	ISM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	19	8610	19	-8610	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATCACGCATACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	68730385	68731847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_68730470_68731657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007112	chr13	+	181	1	ISM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	9910	0	9910	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	68740276	68740457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_68740300_68740500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007113	chr13	+	285	2	ISM	ENSMUSG00000021598.10	ENSMUST00000221893.2	815	3	-57	2600	16	-2600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACTGGGTCTCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	69957975	69959814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_69958172_69959725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007114	chr13	+	383	3	ISM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	1766	318	1693	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGTTTCCATCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	69959725	69963905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_69959810_69961822_69961926_69963709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007115	chr13	+	211	1	ISM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	6053	0	5980	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGTAATTCTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	69964012	69964223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_69964000_69964200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007116	chr13	-	381	1	ISM	ENSMUSG00000113909.2	ENSMUST00000220833.2	757	3	4402	0	4402	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCCCCACCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70799504	70799123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_70799100_70799500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007117	chr13	-	388	2	ISM	ENSMUSG00000113909.2	ENSMUST00000220833.2	757	3	721	219	721	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTCAGTTGCTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	70803185	70799342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_70799684_70803138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007118	chr13	-	580	1	FSM	ENSMUSG00000094989.2	ENSMUST00000075549.8	579	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTCAGTTCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	72603460	72602880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_72602900_72603500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007119	chr13	+	257	1	FSM	ENSMUSG00000066407.4	ENSMUST00000085163.4	300	1	55	-12	55	12	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTGATTGAACGGG	NA	NA	NA	NA	NA	NA	NA	NA	73466017	73466274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_73466000_73466300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007120	chr13	-	570	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGTTTCTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73476661	73467990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007121	chr13	+	677	3	FSM	ENSMUSG00000021607.10	ENSMUST00000221730.2	717	3	44	-4	44	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGCATTCTGTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	73476675	73479859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_73476740_73478978_73479211_73479478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007122	chr13	+	339	1	Genic_Genomic	ENSMUSG00000021607.10	novel	NA	NA	NA	NA	815	1	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTAGTAGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73479959	73480298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_73480000_73480300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007123	chr13	+	1600	2	ISM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	42083	-700	42083	-597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTCATTTGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	73661952	73663944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73662081_73662472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007124	chr13	+	1525	1	ISM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	47701	0	43147	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCGAGTGTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	73663016	73664541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73663000_73664500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007125	chr13	+	183	2	ISM	ENSMUSG00000021610.9	ENST00000630539.1	2019	15	114	15563	114	-15563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGAAAGGTGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	73752425	73753138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73752519_73753048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007126	chr13	+	200	2	ISM	ENSMUSG00000021610.9	ENST00000630539.1	2019	15	772	14227	772	-14227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGATCCCCAAACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	73753083	73754474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73753150_73754340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007127	chr13	+	283	2	ISM	ENSMUSG00000021610.9	ENST00000630539.1	2019	15	2086	12713	-1444	-12713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCTCAAATGGAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	73754397	73755988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73754531_73755838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007128	chr13	+	327	3	ISM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	17	9358	17	-9320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGCCCCAGGGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	73755858	73759381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73755988_73757022_73757102_73759262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007129	chr13	+	202	2	ISM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	3432	8904	3432	-8866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTGTCCCCTGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	73759273	73759835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73759381_73759740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007130	chr13	+	181	2	ISM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	3898	8142	3898	-8104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGCCCAGGAACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	73759739	73760597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73759836_73760512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007131	chr13	+	203	3	ISM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	4671	5396	4671	-5358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAACTGGGGACCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	73760512	73763343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73760598_73762725_73762792_73763291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007132	chr13	+	160	3	ISM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	6881	4618	6881	-4580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGGCGCTGTCTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	73762722	73764121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73762792_73763291_73763343_73764081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007133	chr13	+	218	3	ISM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	9855	2102	9855	-2064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTGTACACGCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	73765696	73766637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73765753_73765837_73765883_73766520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007134	chr13	+	206	2	ISM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	10724	453	10724	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAGTATTCCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	73766565	73768286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73766637_73768151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007135	chr13	+	180	2	NNC	ENSMUSG00000021610.9	novel	1556	12	NA	NA	10742	-420	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGCCATGAGTATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	73766583	73768281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_73766634_73768151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007136	chr13	+	193	1	ISM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	16393	14	12676	9	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGCTGTAATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	73768517	73768710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_73768500_73768700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007137	chr13	-	608	1	NIC	ENSMUSG00000021567.16	novel	4016	10	NA	NA	25465	13	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCCCAAATGCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	73969672	73969064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_73969100_73969700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007138	chr13	-	602	2	NNC	ENSMUSG00000021567.16	novel	1299	8	NA	NA	24294	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAACAAGCACTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	73970843	73969076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_73969640_73970804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007139	chr13	-	1221	7	ISM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	20083	-1	20083	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAACAAGCACTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	73975054	73969076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007140	chr13	-	633	2	ISM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	24191	84	24191	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGGTCCAGAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	73970946	73969161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_73969657_73970808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007141	chr13	-	410	3	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	22212	1768	22212	-1768	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAAGGACTATGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	74063691	74061233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74061459_74062606_74062677_74063576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007142	chr13	-	249	2	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	19218	4131	19218	-4131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGAGTGAAATTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	74066685	74063596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74063690_74066529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007143	chr13	-	259	2	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	17685	7064	17685	-7064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTTGTTTATTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	74068218	74066529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74066684_74068113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007144	chr13	-	263	2	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	1510	21546	1510	-21546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTGCAGCAAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	74084393	74081011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74081107_74084225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007145	chr13	-	340	2	ISM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	103	24778	103	-24778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTAAAGACCCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	74085800	74084243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74084392_74085608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007146	chr13	+	677	2	ISM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	20024	0	20024	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	74105980	74109014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_74106000_74108356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007147	chr13	+	665	1	NIC	ENSMUSG00000057649.7	novel	2407	16	NA	NA	22393	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	74108349	74109014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_74108300_74109000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007148	chr13	-	3048	3	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	34560	0	34560	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTAGGATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74322268	74317606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74320364_74321414_74321543_74322105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007149	chr13	-	2760	1	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	36462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTAGGATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74320366	74317606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_74317600_74320400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007150	chr13	-	1112	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGCTGGTTTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	74465421	74451627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007151	chr13	-	521	1	NIC	ENSMUSG00000021576.7	novel	1131	6	NA	NA	13173	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGATACAGACTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	74452171	74451650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_74451600_74452200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007152	chr13	-	638	5	FSM	ENSMUSG00000021576.7	ENST00000628729.2	950	5	85	227	85	-227	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATACAAACCTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	74465259	74451877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74465225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007153	chr13	-	551	5	ISM	ENSMUSG00000021577.15	ENST00000515467.2	725	6	3058	-1	3058	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGAAACCTGACAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	74476535	74471209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74471276_74471951_74472074_74475045_74475177_74475365_74475478_74476415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007154	chr13	-	655	5	ISM	ENSMUSG00000021577.15	ENST00000515467.2	725	6	5	741	5	-741	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATCAGCCCAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	74479588	74471951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007155	chr13	+	4362	1	ISM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	11113	0	11078	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTTTTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	74509540	74513902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_74509500_74513900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007156	chr13	+	995	1	FSM	ENSMUSG00000062382.10	ENSMUST00000222435.2	938	1	-31	-26	-31	26	mono-exon	FALSE	NA	NA	NA	NA	NA	11360	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTAGCTCCATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	74554496	74555491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_74554500_74555500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007157	chr13	-	1010	2	NNC	ENSMUSG00000113311.2	novel	661	2	NA	NA	-61091	-2214	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGTTATCTCTTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	74615947	74554515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_74555486_74615907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007158	chr13	-	873	1	ISM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	13044	0	2017	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGTCATGATGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	74629045	74628172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74628200_74629000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007159	chr13	-	526	2	ISM	ENSMUSG00000069208.10	ENSMUST00000074369.7	822	3	341	172	341	-172	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGTGGTAAAGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	74630721	74628807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74629270_74630657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007160	chr13	-	1386	1	Genic_Genomic	ENSMUSG00000021585.11	novel	NA	NA	NA	NA	40481	3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTATGTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	74841869	74840483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_74840500_74841900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007161	chr13	-	1397	2	ISM	ENSMUSG00000021585.11	ENSMUST00000220738.2	1653	17	38307	-1110	38277	742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCCCAGTCCTATAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	74844073	74841619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_74842953_74844009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007162	chr13	+	243	1	FSM	ENSMUSG00000074800.5	ENSMUST00000099371.5	276	1	41	-8	41	8	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCTGAGACTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75793055	75793298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_75793100_75793300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007163	chr13	+	1065	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	4	276	4	-276	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCCAGAAAATCCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	75987990	75997994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_75988295_75995288_75995418_75997362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007164	chr13	+	730	1	ISM	ENSMUSG00000021591.9	ENSMUST00000223120.2	1333	3	9524	0	9515	0	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCGGTTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75997543	75998273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_75997500_75998300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007165	chr13	+	932	1	FSM	ENSMUSG00000061833.7	ENSMUST00000073790.7	878	1	3	-57	3	57	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAACTGACTGCATACTG	NA	NA	NA	NA	NA	NA	NA	NA	76102257	76103189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_76102300_76103200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007166	chr13	-	713	1	Genic_Genomic	ENSMUSG00000043190.15	novel	NA	NA	NA	NA	6026	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTGTATGTGTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	76150364	76149651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_76149700_76150400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007167	chr13	-	531	3	ISM	ENSMUSG00000043190.15	ENSMUST00000167271.9	595	4	10433	2	-15	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAGTAATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	76156405	76150887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_76151208_76156101_76156137_76156229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007168	chr13	-	463	2	FSM	ENSMUSG00000043190.15	ENST00000513950.2	433	2	0	-30	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTATGTTTGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	76156390	76150905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_76151208_76156229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007169	chr13	-	620	1	ISM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	37619	0	37619	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAATGTATAATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76209160	76208540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_76208500_76209200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007170	chr13	-	630	2	ISM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	33225	1707	33225	-1707	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTCAAGCTATATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76213554	76210247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_76210722_76213398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007171	chr13	+	371	1	FSM	ENSMUSG00000090119.2	ENSMUST00000160999.2	669	1	301	-3	301	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCCACCTGGACTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	77083582	77083953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_77083600_77084000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007172	chr13	+	1171	3	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	383073	-26	383073	26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTATTGTTTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77172901	77178961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_77173012_77176740_77176839_77177998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007173	chr13	+	925	3	ISM	ENSMUSG00000071252.7	ENSMUST00000225605.2	1539	4	39344	492	29	-492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGTGACATTTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	77323016	77341341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_77323104_77331719_77331889_77340672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007174	chr13	+	250	3	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	0	338258	0	-338258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTTCAAAAGTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	77890930	77973514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_77891006_77907546_77907649_77973441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007175	chr13	+	314	3	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	16624	260846	16624	-260846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTGATTTCTATGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	77907554	78050926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_77907649_77973441_77973508_78050772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007176	chr13	+	425	3	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	159876	163951	159876	-163951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCATGGCTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	78050806	78147821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_78050995_78100103_78100224_78147704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007177	chr13	+	344	3	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	209153	157179	209153	-157179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTTGATGAAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	78100083	78154593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_78100224_78147704_78147822_78154506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007178	chr13	+	1736	3	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	256760	-1379	256760	251	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTGCACATGCATACA	NA	NA	NA	NA	NA	NA	NA	NA	78147690	78313151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_78147822_78154506_78154592_78311631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007179	chr13	-	179	2	Antisense	novelGene_ENSMUSG00000114622.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGGTTCTGAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	78311772	78154543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr13_-_78154586_78311635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007180	chr13	+	155	1	NIC	ENSMUSG00000064138.15	novel	1436	11	NA	NA	420689	0	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGCAGCCGCCCGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	78311619	78311774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_78311600_78311800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007181	chr13	+	1517	1	Genic_Genomic	ENSMUSG00000064138.15	novel	NA	NA	NA	NA	421908	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTGTGTCTTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	78312838	78314355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_78312800_78314400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007182	chr13	-	1460	4	FSM	ENSMUSG00000069171.15	ENST00000615873.1	1428	4	26	-58	26	58	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGATTTGGAAGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	78346666	78337562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_78338133_78343280_78343809_78346238_78346543_78346608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007183	chr13	-	1287	3	NNC	ENSMUSG00000069171.15	novel	3207	3	NA	NA	145	-54	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAAACCAGGAGAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	78346547	78337674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_78338133_78343280_78343801_78346238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007184	chr13	+	1696	1	Genic_Genomic	ENSMUSG00000087143.10	novel	NA	NA	NA	NA	32084	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTCGTGTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	78382989	78384685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_78383000_78384700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007185	chr13	+	335	1	FSM	ENSMUSG00002075877.1	ENSMUST00020183356.1	84	1	-9	-242	-9	242	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGACTGAGCAGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	81213586	81213921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_81213600_81213900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007186	chr13	+	644	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGCAGGTGTCAGATATT	NA	NA	NA	NA	NA	NA	NA	NA	81214012	81214656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr13_+_81214000_81214700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007187	chr13	+	2250	1	ISM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	12959	0	12793	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	NA	NA	NA	NA	NA	NA	NA	NA	81818740	81820990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_81818700_81821000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007188	chr13	+	1395	1	ISM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	40540	0	40540	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGCTTTTTATAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	81899999	81901394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_81900000_81901400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007189	chr13	+	514	3	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	2	10214	2	-10214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTAATGAAGTTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	81931197	81935060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_81931477_81932759_81932896_81934961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007190	chr13	+	431	3	NNC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	69	-10234	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCAAGATCACATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	81931264	81935040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_81931481_81932759_81932896_81934961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007191	chr13	+	449	3	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	1563	5003	1563	-5003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTACTTTTGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	81932758	81940271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_81932896_81934961_81935077_81940074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007192	chr13	+	606	3	ISM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	3762	207	3762	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTAGGACTAGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	81934957	81945067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_81935077_81940074_81940267_81944772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007193	chr13	+	325	1	Genic_Genomic	ENSMUSG00000021537.10	novel	NA	NA	NA	NA	13756	2	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAGTCTGGAACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	81944951	81945276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_81945000_81945300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007194	chr13	+	1954	4	ISM	ENSMUSG00000005583.17	ENSMUST00000198217.5	1257	8	77164	-1217	77164	155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAACATCCTAAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	83800959	83811967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_83801106_83803625_83803756_83804335_83804472_83810425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007195	chr13	+	1895	3	ISM	ENSMUSG00000005583.17	ENSMUST00000199210.5	1185	9	79891	-1461	79891	-334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGAGTTGGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	83803686	83812211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_83803756_83804335_83804472_83810521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007196	chr13	+	2636	1	ISM	ENSMUSG00000005583.17	ENSMUST00000005722.14	6217	11	158437	1766	87000	8	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAAATAGCCATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	83810795	83813431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_83810800_83813400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007197	chr13	+	759	3	ISM	ENSMUSG00000035762.12	ENST00000511218.5	1345	8	20197	91	20197	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAAACCTCCAACAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	84440578	84443289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_84440673_84441499_84441597_84442721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007198	chr13	+	662	1	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	22338	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCCTACAGAACAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	84442719	84443381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_+_84442700_84443400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007199	chr13	+	368	2	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	-39	21734	1	-21734	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGATGGGAGAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85337527	85338996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_85337772_85338872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007200	chr13	+	375	3	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	1331	15058	1302	-15058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAGGTAAACCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	85338897	85345672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_85338996_85344370_85344445_85345469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007201	chr13	+	441	3	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	6812	10115	6783	-10115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATTTGTTTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	85344378	85350615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_85344445_85345469_85345681_85350451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007202	chr13	+	404	3	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	7946	6412	7917	-6412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCTATTAATGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	85345512	85354318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_85345681_85350451_85350616_85354246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007203	chr13	+	343	3	ISM	ENSMUSG00000021548.11	ENSMUST00000164127.8	1718	8	12890	3721	12861	-3721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAGGCATGATAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85350456	85357009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_85350616_85354246_85354318_85356896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007204	chr13	+	422	2	ISM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	22374	-187	22374	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCATTATACTAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85359969	85361216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_85360034_85360858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007205	chr13	+	379	1	Genic_Genomic	ENSMUSG00000021548.11	novel	NA	NA	NA	NA	23869	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTGTTTTGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	85361464	85361843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_85361500_85361800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007206	chr13	-	534	3	NNC	ENSMUSG00000017778.15	novel	540	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86195024	86192934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_86193021_86193845_86193989_86194719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007207	chr13	-	406	3	FSM	ENSMUSG00000017778.15	ENSMUST00000078764.9	433	3	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86194552	86192934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_86193028_86193845_86193989_86194382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007208	chr13	-	545	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	-5	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86195028	86192934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_86193028_86193845_86193989_86194719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007209	chr13	-	539	3	NNC	ENSMUSG00000017778.15	novel	540	3	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCAATGCCTCGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86195021	86192937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_86193028_86193845_86193989_86194715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007210	chr13	+	488	2	ISM	ENSMUSG00000034488.15	ENSMUST00000118731.8	2721	10	363285	693	363115	-693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTTATTCAGTGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	89332875	89347964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_89332983_89347583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007211	chr13	+	520	2	ISM	ENSMUSG00000012422.15	ENSMUST00000012566.9	1541	4	-388	6190	251	-6190	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTTACAAGTAACAATC	NA	NA	NA	NA	NA	NA	NA	NA	90237492	90246590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_90237903_90246480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007212	chr13	+	573	3	ISM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	9283	7411	8644	185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAAAAACTTGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	90246524	90252965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_90246591_90249026_90249062_90252493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007213	chr13	+	493	1	ISM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	22642	0	22003	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGGCTGAAAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	90259883	90260376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_90259900_90260400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007214	chr13	+	938	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCTATAGGATAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	91071077	91073071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007215	chr13	+	933	4	NNC	ENSMUSG00000049517.9	novel	937	4	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTCTATAGGATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	91071079	91073070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_91071319_91071705_91071864_91072444_91072566_91072655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007216	chr13	+	584	4	NNC	ENSMUSG00000049517.9	novel	937	4	NA	NA	187	-161	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTACTAAAATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	91071263	91072908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_91071319_91071710_91071866_91072444_91072566_91072655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007217	chr13	+	417	1	Genic_Genomic	ENSMUSG00000049517.9	novel	NA	NA	NA	NA	1577	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTCTATAGGATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	91072653	91073070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_91072700_91073100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007218	chr13	+	624	2	ISM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	231848	9	231842	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTTGCCCGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	91841147	91849377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_91841179_91848784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007219	chr13	+	1575	2	ISM	ENSMUSG00000003992.16	ENST00000505980.5	1504	16	232828	-964	232823	865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTATAATTGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91842128	91850251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_91842237_91848784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007220	chr13	+	602	1	ISM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	239616	2162	239479	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTGAGCCCCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	91848784	91849386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_91848800_91849400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007221	chr13	+	1479	1	ISM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	240901	0	240764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGATAATTTGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	91850069	91851548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_91850100_91851500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007222	chr13	-	1531	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	91955814	91944651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007223	chr13	+	2105	2	ISM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	13481	2318	13481	-2318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTAAATGTGTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	92504714	92523243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_92504809_92521232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007224	chr13	+	2068	1	ISM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	32260	0	32260	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCAAATTCTGAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	92523493	92525561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_92523500_92525600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007225	chr13	+	3404	4	ISM	ENSMUSG00000007617.19	ENST00000334082.11	5327	10	87633	-1	83689	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAAATGGTAAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	93528230	93541845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_93528310_93529535_93529617_93538548_93541123_93541175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007226	chr13	-	794	5	FSM	ENSMUSG00000042118.8	ENST00000521567.1	809	5	17	-2	17	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTTCAGCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	93805841	93793497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93805762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007227	chr13	+	580	2	ISM	ENSMUSG00000042082.8	ENSMUST00000091403.6	4038	8	71	152790	71	-152790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGACATGCACACATTT	NA	NA	NA	NA	NA	NA	NA	NA	93908208	93926734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_93908601_93926546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007228	chr13	+	1078	2	FSM	ENSMUSG00000045312.13	ENSMUST00000121618.2	4209	2	258	2873	258	-1981	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCATGTTGTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	94310757	94329044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_94311147_94328355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007229	chr13	+	3351	1	Genic_Genomic	ENSMUSG00000045312.13	novel	NA	NA	NA	NA	18068	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCAAGTTTGTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94328567	94331918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_94328600_94331900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007230	chr13	-	1646	1	Genic_Genomic	ENSMUSG00000021687.15	novel	NA	NA	NA	NA	43607	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGTATAAAAGAGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	94339459	94337813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_94337800_94339500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007231	chr13	+	349	3	ISM	ENSMUSG00000042043.7	ENST00000522370.1	436	4	6	5536	6	-5536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATCTTATATTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	94822433	94973715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_94822577_94968867_94968974_94973615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007232	chr13	+	565	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	0	-6	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGTTGGCCACTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	94925417	94979436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007233	chr13	+	446	3	FSM	ENSMUSG00000042043.7	ENST00000520361.5	439	3	0	-7	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTTTTATACTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	94925425	94979412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_94925511_94968867_94968974_94979157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007234	chr13	+	525	4	FSM	ENSMUSG00000042043.7	ENST00000518338.6	519	4	2	-8	2	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTCATCTAATAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	94925455	94979394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_94925511_94968867_94968974_94973575_94973703_94979157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007235	chr13	+	458	3	NNC	ENSMUSG00000042043.7	novel	559	4	NA	NA	14631	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTTTCAGTTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	94968872	94979431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_94968974_94973619_94973703_94979157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007236	chr13	+	368	2	NNC	ENSMUSG00000042043.7	novel	559	4	NA	NA	19371	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTTTCAGTTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	94973612	94979431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_94973707_94979157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007237	chr13	+	284	1	Genic_Genomic	ENSMUSG00000042043.7	novel	NA	NA	NA	NA	24911	6	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGTTGGCCACTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	94979152	94979436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_94979200_94979400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007238	chr13	+	1211	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	9	674	9	-674	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTTGCCTGGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	95461753	95473675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_95461853_95472563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007239	chr13	+	1211	1	Genic_Genomic	ENSMUSG00000041995.9	novel	NA	NA	NA	NA	11395	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGTGTTCTGCTTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	95473139	95474350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_95473100_95474400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007240	chr13	-	260	1	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	24410	0	24410	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCTTTGTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	95487450	95487190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95487200_95487400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007241	chr13	-	385	3	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	21339	799	21339	-799	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGAGCTTCAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	95490521	95487989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95488211_95489254_95489355_95490457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007242	chr13	-	251	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	17988	5710	17988	-5710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGTGCTAAGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	95493872	95492900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95492984_95493704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007243	chr13	-	260	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	16537	6526	16537	-6526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGCCTCTGGGTATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	95495323	95493716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95493871_95495217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007244	chr13	-	353	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	10425	12160	10425	-12160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGTAAGAATTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	95501435	95499350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95499457_95501188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007245	chr13	-	288	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	6856	14149	6856	-14149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTCAGCGTCATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	95505004	95501339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95501511_95504887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007246	chr13	-	278	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	5805	17759	5805	-17759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGACTGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95506055	95504949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95505077_95505904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007247	chr13	-	369	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	4390	18713	4390	-18713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCTCAGACCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	95507470	95505903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95506067_95507264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007248	chr13	-	268	2	ISM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	3706	20115	3706	-20115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCCATAGACAGGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	95508154	95507305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95507468_95508048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007249	chr13	-	2009	1	Genic_Genomic	ENSMUSG00000048376.7	novel	NA	NA	NA	NA	14683	7	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGTGTCTGGAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	95740312	95738303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_95738300_95740300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007250	chr13	-	2187	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	2	1147	2	-1147	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGCCTCCCAGAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	95754993	95739457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_95741446_95754794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007251	chr13	-	114	2	ISM	ENSMUSG00000021676.11	ENST00000396234.7	3298	23	79048	145	79048	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAACCTTCTCATATAC	NA	NA	NA	NA	NA	NA	NA	NA	95765504	95764564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95764629_95765454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007252	chr13	-	111	2	ISM	ENSMUSG00000021676.11	ENST00000396234.7	3298	23	47864	29976	47864	-29976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATGGACAAATACACGG	NA	NA	NA	NA	NA	NA	NA	NA	95796688	95794395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95794444_95796625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007253	chr13	-	107	2	ISM	ENSMUSG00000021676.11	ENST00000396234.7	3298	23	47000	32378	47000	-32378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACATCATTGACATGACA	NA	NA	NA	NA	NA	NA	NA	NA	95797552	95796797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95796859_95797506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007254	chr13	-	132	2	ISM	ENSMUSG00000021676.11	ENST00000396234.7	3298	23	43919	33747	43919	-33747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATTGAAAACCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	95800633	95798166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95798236_95800570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007255	chr13	-	120	2	ISM	ENSMUSG00000021676.11	ENST00000396234.7	3298	23	36736	40566	36736	-40566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTGAAATAGAAATACTG	NA	NA	NA	NA	NA	NA	NA	NA	95807816	95804985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95805026_95807736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007256	chr13	-	148	2	ISM	ENSMUSG00000021676.11	ENST00000396234.7	3298	23	34282	45073	34282	-45073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCGGGCACCTTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	95810270	95809492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95809563_95810192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007257	chr13	-	125	2	ISM	ENSMUSG00000021676.11	ENST00000396234.7	3298	23	25094	47402	25094	-47402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATTGCTTTCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	95819458	95811821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_95811906_95819417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007258	chr13	+	1099	7	FSM	ENSMUSG00000021671.10	ENST00000510798.5	1217	7	118	0	118	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGTGTTCACACTC	NA	NA	NA	NA	NA	NA	NA	NA	96533273	96551126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96550986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007259	chr13	-	1884	3	ISM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	14798	-685	14798	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGCAGTGGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	96788420	96785469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_96787142_96787517_96787673_96788363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007260	chr13	+	1185	2	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	34815	60523	34815	-60523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGTAAATCAGGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	96967059	96969086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_96967116_96967957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007261	chr13	+	1283	2	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	36013	59334	36013	-59334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATAAATCTTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	96968257	96970275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_96969369_96970103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007262	chr13	+	1124	2	ISM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	82406	0	82406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCTTTTCAAACTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	97014650	97029609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_97015632_97029466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007263	chr13	+	5085	3	FSM	ENSMUSG00000091387.3	ENSMUST00000171324.3	5087	3	5	-3	5	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACTCCTCGGACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	97061201	97087417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_97061457_97072387_97072505_97082704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007264	chr13	-	2423	5	ISM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	2323	0	2238	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTGGTCTAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	97272122	97265931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007265	chr13	+	306	1	ISM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	38168	0	38106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	97312653	97312959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_97312700_97313000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007266	chr13	+	1757	2	ISM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	4852	1569	4852	-1569	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACCCTGGTCACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	97382464	97387973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_97383293_97387044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007267	chr13	+	1079	3	FSM	ENSMUSG00000097346.2	ENSMUST00000180396.2	1073	3	-5	-1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTGTTCAGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	97887614	97897474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_97887661_97887919_97888078_97896599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007268	chr13	-	490	1	FSM	ENSMUSG00000069117.5	ENSMUST00000074072.5	561	1	79	-8	79	8	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATTCGAGAATGACATA	NA	NA	NA	NA	NA	NA	NA	NA	97897061	97896571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_97896600_97897100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007269	chr13	-	966	1	Genic_Genomic	ENSMUSG00000041747.4	novel	NA	NA	NA	NA	13158	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCCTTGATCATGATTA	NA	NA	NA	NA	NA	NA	NA	NA	98384315	98383349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_98383300_98384300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007270	chr13	+	674	2	ISM	ENSMUSG00000021661.17	ENSMUST00000123924.8	2328	8	-86	7463	-31	-7463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATGAAGAGGATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	98399615	98402963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_98399985_98402658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007271	chr13	+	475	2	ISM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	9528	149	9528	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACTCTTGTATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	98409277	98410277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_98409361_98409885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007272	chr13	+	487	1	ISM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	10293	0	10190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	98409939	98410426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_98409900_98410400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007273	chr13	-	789	5	FSM	ENSMUSG00000021660.15	ENST00000678135.1	741	5	15	-63	-6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTATCATTTTACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	98453481	98446401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98453373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007274	chr13	-	696	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	0	192	0	-132	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTTTTAAAATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98453514	98446596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007275	chr13	+	1447	3	FSM	ENSMUSG00000048603.9	ENSMUST00000126622.8	1446	3	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAATTAAGACAATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	98453577	98458545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_98454118_98455581_98455654_98457710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007276	chr13	-	189	1	ISM	ENSMUSG00000092116.2	ENSMUST00000170205.2	527	2	2465	0	2465	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGAATTTAGTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	98626044	98625855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98625900_98626000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007277	chr13	-	946	3	ISM	ENSMUSG00000052485.8	ENSMUST00000064347.8	1161	4	2303	0	2303	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCCCATTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	98829039	98822742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98823025_98824855_98824992_98828511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007278	chr13	-	2279	1	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	85340	0	49657	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCGTTGTTATCCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	98977645	98975366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98975400_98977600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007279	chr13	-	1928	2	ISM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	79075	3909	43392	3669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGAATAAATACCCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	98983910	98979275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98981129_98983835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007280	chr13	-	429	2	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	44241	5286	44241	2112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAGAACCACTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	98983061	98980832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98981129_98982928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007281	chr13	-	405	3	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	35222	14404	35222	-7006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGCCACCTGGGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	98992080	98989950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98990007_98991650_98991739_98991819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007282	chr13	-	529	3	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	32235	16272	32235	-8874	internal_fragment	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCACAGGCGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98995067	98991818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98992087_98993396_98993484_98994893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007283	chr13	-	424	3	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	30819	17898	30819	-10500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACATGCTGAAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	98996483	98993444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98993484_98994893_98995066_98996270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007284	chr13	-	377	2	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	30001	20726	30001	-13328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGGACAGAGCCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	98997301	98996272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98996497_98997148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007285	chr13	-	317	2	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	26916	21609	26916	-14211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGGTACGTCCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	99000386	98997155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_98997302_99000215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007286	chr13	-	310	3	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	25726	24689	25726	-17291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTGACTGGAACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	99001576	99000235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99000385_99000935_99000997_99001476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007287	chr13	-	302	3	ISM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	20473	25952	20473	-18554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTAAGGCATCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	99006829	99001498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99001596_99003553_99003677_99006747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007288	chr13	-	389	2	ISM	ENSMUSG00000100410.2	ENSMUST00000189489.2	720	6	9099	0	9099	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAAGAGTCCTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	99215330	99213033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99213309_99215216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007289	chr13	-	749	1	Genic_Genomic	ENSMUSG00000021650.8	novel	NA	NA	NA	NA	23014	2	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGTTGTGTTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	99456901	99456152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_99456200_99456900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007290	chr13	-	657	2	NNC	ENSMUSG00000021650.8	novel	716	6	NA	NA	21733	-201	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCGCAAGTTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	99458182	99456355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_99456902_99458071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007291	chr13	-	820	4	ISM	ENSMUSG00000021650.8	ENST00000503868.5	716	6	13334	-283	13334	-238	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTCTTGGTCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	99466581	99456392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007292	chr13	-	399	4	ISM	ENSMUSG00000021650.8	ENST00000503868.5	716	6	10878	1391	10878	-1391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGCCAACGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	99469037	99458066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99458183_99463145_99463221_99466459_99466574_99468943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007293	chr13	-	401	4	ISM	ENSMUSG00000021650.8	ENST00000543322.5	964	8	6625	6470	6625	-6470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGATTTCCTTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	99473290	99463145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99463221_99466459_99466574_99468943_99469036_99473170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007294	chr13	-	424	4	ISM	ENSMUSG00000021650.8	ENST00000543322.5	964	8	3407	9784	3407	-9784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACCTTGGGGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	99476508	99466459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99466574_99468943_99469036_99473170_99473289_99476408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007295	chr13	+	145	2	Antisense	novelGene_ENSMUSG00000021650.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATGAAGGAAAGAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	99466521	99469037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr13_+_99466576_99468946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007296	chr13	-	237	3	ISM	ENSMUSG00000021650.8	ENST00000503868.5	716	6	1	9847	1	-9847	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGGAGACATTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	99479914	99466522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99466574_99468943_99469036_99479820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007297	chr13	-	435	4	ISM	ENSMUSG00000021650.8	ENST00000543322.5	964	8	0	12268	0	-12268	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCGTTTCCCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	99479915	99468943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99469036_99473170_99473289_99476408_99476539_99479820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007298	chr13	-	414	1	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	94681	0	25761	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTCCTTGTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	99558367	99557953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99558000_99558400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007299	chr13	-	572	2	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	89078	4188	20158	-4188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACTGCTAAGGGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	99563970	99562141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99562470_99563726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007300	chr13	-	515	2	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	74764	13884	5844	4304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGCTCATCCGGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	99578284	99571837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_99572210_99578141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007301	chr13	-	1340	1	Genic_Genomic	ENSMUSG00000052727.7	novel	NA	NA	NA	NA	6655	8	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTAAAAATCAGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	99577473	99576133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_99576100_99577500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007302	chr13	-	1615	3	FSM	ENSMUSG00000052727.7	ENSMUST00000223725.2	2669	3	184	870	184	-870	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGATCAGCTCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	99583944	99577011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_99578283_99580721_99580805_99583683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007303	chr13	-	851	6	ISM	ENSMUSG00000049658.14	ENST00000380675.3	1704	10	10490	0	10295	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGAGCCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100230051	100214325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007304	chr13	-	582	6	ISM	ENSMUSG00000049658.14	ENST00000380675.3	1704	10	5439	6323	5244	-6323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTAAAGCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100235102	100220648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100220704_100225860_100225956_100228701_100228836_100229921_100230051_100234045_100234106_100234993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007305	chr13	-	808	6	ISM	ENSMUSG00000049658.14	ENST00000380675.3	1704	10	4801	11535	4606	-11535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTATGCCTATAACAT	NA	NA	NA	NA	NA	NA	NA	NA	100235740	100225860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100225956_100228701_100228836_100229921_100230051_100234045_100234106_100234993_100235104_100235460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007306	chr13	-	924	5	ISM	ENSMUSG00000049658.14	ENST00000380675.3	1704	10	0	15655	0	-15655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGTTCCTCGAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	100240541	100229980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100230051_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007307	chr13	+	602	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAATATTATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100244518	100250746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_100244738_100245530_100245640_100250472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007308	chr13	+	605	3	NNC	ENSMUSG00000021643.16	novel	601	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAATATTATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100244519	100250746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_100244738_100245530_100245644_100250472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007309	chr13	+	467	3	FSM	ENSMUSG00000021643.16	ENSMUST00000152286.2	465	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGGTGAATATTATT	NA	NA	NA	NA	NA	NA	NA	NA	100244903	100250741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_100244993_100245530_100245640_100250472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007310	chr13	-	979	3	ISM	ENSMUSG00000021638.13	ENSMUST00000160859.8	2443	9	46236	-40	34933	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATTATTTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100642753	100634581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100635424_100639443_100639486_100642658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007311	chr13	-	363	1	ISM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	33525	0	33521	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100754034	100753671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100753700_100754000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007312	chr13	+	1300	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	2	-4	2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTTTAATAGTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100787488	100802871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007313	chr13	+	1227	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTACTTTGGCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	100787847	100792569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_100787954_100790698_100790792_100791541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007314	chr13	+	1214	3	NNC	ENSMUSG00000078941.10	novel	1222	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTACTTTGGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	100787850	100792568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_+_100787954_100790698_100790792_100791550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007315	chr13	+	732	1	ISM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	3985	0	3948	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	100791835	100792567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_100791800_100792600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007316	chr13	-	878	1	NIC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	27392	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTTATGGACTATT	NA	NA	NA	NA	NA	NA	NA	NA	100840016	100839138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_100839100_100840000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007317	chr13	-	1118	3	ISM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	24423	56	24384	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGATTTAATTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	100843024	100839194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100840015_100840898_100841047_100842874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007318	chr13	-	683	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	18	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	100881149	100872462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007319	chr13	-	1048	1	ISM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	6793	80	6625	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGCCCTTTTGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	100916285	100915237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100915200_100916300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007320	chr13	-	382	1	Genic_Genomic	ENSMUSG00000021629.11	novel	NA	NA	NA	NA	30312	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGCAAATGAATAATTG	NA	NA	NA	NA	NA	NA	NA	NA	100939536	100939154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_100939200_100939500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007321	chr13	-	399	2	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	29435	260	29435	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTTTGAATTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	100940413	100939614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100939970_100940369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007322	chr13	-	411	2	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	24061	3699	24061	-3699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTAGAAAAGGTAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	100945787	100943053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100943269_100945591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007323	chr13	-	423	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	20587	6246	20587	-6246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGGGGTGAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100949261	100945600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100945788_100947813_100947944_100949155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007324	chr13	-	531	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	19392	9903	19392	-9903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGGATTTCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	100950456	100949257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100949314_100949805_100950015_100950190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007325	chr13	-	389	2	NNC	ENSMUSG00000021629.11	novel	2722	15	NA	NA	19389	-10538	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTAGGTTCATTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100950459	100949892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_100950015_100950192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007326	chr13	-	521	3	ISM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	16342	11051	16255	-10852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCATTTTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	100953593	100950206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100950480_100951103_100951275_100953516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007327	chr13	-	511	3	ISM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	-81	23605	6	-23605	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATGTGGGCGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	100969929	100962959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_100963027_100965407_100965531_100969608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007328	chr13	-	1774	1	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	21197	2264	21197	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	103879893	103878119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_103878100_103879900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007329	chr13	-	1982	4	ISM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	12093	2724	12093	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCACTTTAGTTCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	103888997	103878579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007330	chr13	-	1346	3	FSM	ENSMUSG00000032621.9	ENST00000612404.4	1344	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTACTCCAGGGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	103911126	103902650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_103903543_103905824_103905959_103910806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007331	chr13	-	1337	3	NNC	ENSMUSG00000032621.9	novel	1344	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTACTCCAGGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	103911122	103902651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_103903535_103905820_103905959_103910806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007332	chr13	-	1341	3	NNC	ENSMUSG00000032621.9	novel	1344	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTACTCCAGGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	103911118	103902651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_103903543_103905820_103905959_103910806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007333	chr13	-	1420	3	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	54644	2657	54644	-2657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTTTCAGACCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	103971151	103959847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_103959915_103961227_103961435_103970005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007334	chr13	-	1291	2	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	49796	13240	49796	-13240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGTGCCAGCAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	103975999	103970430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_103971537_103975814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007335	chr13	-	994	1	ISM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	35327	0	35265	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGAGTCAACTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	104279650	104278656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104278700_104279600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007336	chr13	-	1236	3	ISM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	31078	-54	31062	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTGTATCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	104283853	104279770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104280754_104280911_104281063_104283751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007337	chr13	-	186	1	ISM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	34968	1167	34906	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGATTTTTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	104280009	104279823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104279800_104280000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007338	chr13	-	210	2	ISM	ENSMUSG00000021711.18	ENSMUST00000179891.2	1689	13	28294	4183	28294	-4183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATCTAGGTGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	104286621	104284644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104284791_104286557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007339	chr13	-	1604	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGATTTTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	104314942	104310229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_104311513_104314621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007340	chr13	+	294	1	ISM	ENSMUSG00000021712.16	ENSMUST00000069187.12	3546	10	23888	352	23629	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTGTGACGTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	104339234	104339528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_104339200_104339500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007341	chr13	-	211	1	Genic_Genomic	ENSMUSG00000021713.10	novel	NA	NA	NA	NA	23491	3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACGTGTCAAATGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	104341839	104341628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_104341600_104341800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007342	chr13	-	219	2	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	21603	196	21595	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCGATAAGCCTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	104343735	104342065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104342156_104343606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007343	chr13	-	268	2	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	15149	4322	15141	-4322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAGTTTCAGATAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	104350189	104346191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104346304_104350033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007344	chr13	-	279	2	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	11561	8256	11553	-8256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAAAGCTTCTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	104353777	104350125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104350224_104353596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007345	chr13	-	190	2	ISM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	5871	15055	5863	-15055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAGTACAGGAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	104359467	104356924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104356993_104359345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007346	chr13	-	198	2	ISM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	3377	17967	3377	-17729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGCTTTATAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	104361953	104359598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104359701_104361857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007347	chr13	-	241	2	ISM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	61	20244	61	-20006	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGGTATGTACCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	104365269	104361875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_104361961_104365113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007348	chr13	+	1872	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	121	372	121	-372	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCGTACACTTGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	104953805	104975410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007349	chr13	+	1579	1	Genic_Genomic	ENSMUSG00000021716.15	novel	NA	NA	NA	NA	20529	10	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTAAAACACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	104974213	104975792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_104974200_104975800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007350	chr13	+	238	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCTCAGACGGAAAAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	107039619	107039857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr13_+_107039600_107039900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007351	chr13	-	1270	1	ISM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	60431	1422	35069	1	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTATAGTGGTGCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	107098195	107096925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_107096900_107098200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007352	chr13	-	1675	4	ISM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	27969	-1185	27969	322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGCTAATCTAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	107105295	107097445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007353	chr13	+	1614	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	35	448	35	-448	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTTAAATGTCACCGGA	NA	NA	NA	NA	NA	NA	NA	NA	108181057	108185258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_108181243_108182958_108183103_108183973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007354	chr13	+	1330	1	ISM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	3397	0	1385	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	108184376	108185706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_108184400_108185700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007355	chr13	-	663	4	FSM	ENSMUSG00000068184.8	ENSMUST00000163558.3	678	4	16	-1	-16	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCGTATTTCCTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	108295141	108189121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_108189489_108217886_108217928_108228067_108228158_108294976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007356	chr13	-	376	1	NIC	ENSMUSG00000068184.8	novel	678	4	NA	NA	105627	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCGTATTTCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	108189498	108189122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_108189100_108189500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007357	chr13	+	149	2	ISM	ENSMUSG00000021697.13	ENSMUST00000171178.2	1404	10	45812	25150	45812	-25150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCCTTGGAGGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	108498767	108500086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_108498897_108500066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007358	chr13	+	801	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	-4	-2	-4	2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGATTTTTAATAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	108807132	108807933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_108807100_108807900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007359	chr13	+	921	4	ISM	ENSMUSG00000021699.18	ENSMUST00000117420.8	1955	10	21476	-106	21476	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACGTTTGTTGAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	110084853	110088004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_110084929_110085947_110086071_110086742_110086926_110087464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007360	chr13	+	611	3	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	6	4452	6	-4452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGACTCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	110531585	110532926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_110531972_110532548_110532657_110532809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007361	chr13	+	451	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	1542	3023	1542	-3023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCAAAAACCCAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	110533121	110534355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_110533255_110533440_110533529_110534004_110534101_110534221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007362	chr13	+	451	3	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	2422	2718	2422	-2718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTATCCAGGATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	110534001	110534660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_110534101_110534221_110534421_110534507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007363	chr13	+	456	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	2760	2037	2760	-2037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGTGCTCAAAACCGTA	NA	NA	NA	NA	NA	NA	NA	NA	110534339	110535341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_110534421_110534507_110534656_110534906_110535005_110535212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007364	chr13	+	441	3	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	3694	1334	3694	-1334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACCCCGTGTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	110535273	110536044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_110535343_110535554_110535796_110535913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007365	chr13	+	876	4	ISM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	3983	410	3983	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGAGCCGAGTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	110535562	110536968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_110535796_110535913_110536044_110536296_110536408_110536566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007366	chr13	+	470	1	Genic_Genomic	ENSMUSG00000021701.9	novel	NA	NA	NA	NA	5331	2	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTCCTGTCCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	110536910	110537380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_110536900_110537400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007367	chr13	-	1349	4	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	51840	0	51840	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTCTTTGTAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	111574574	111562211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007368	chr13	-	722	1	NIC	ENSMUSG00000032745.19	novel	3285	11	NA	NA	63227	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTTTCCAAACAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	111563187	111562465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_111562500_111563200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007369	chr13	-	185	2	ISM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	50803	12130	50655	-12130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACACGAATGCGCAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	111575759	111574595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_111574659_111575637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007370	chr13	-	1361	4	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	1509	23258	1509	-23004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTAAGTAATGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	111624905	111585469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_111585534_111589557_111589782_111589906_111590031_111623956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007371	chr13	-	1608	4	ISM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	-149	27346	-1	-27092	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTTCATAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	111626563	111589557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_111589782_111589906_111590031_111623956_111624905_111626251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007372	chr13	+	1271	2	ISM	ENSMUSG00000032727.15	ENSMUST00000047412.11	4243	13	28094	1825	28094	-1825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATCCTGTTTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	111850978	111852345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_111851122_111851217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007373	chr13	+	1163	1	ISM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	31253	3	31080	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCCTGGGTCGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	111853964	111855127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_111854000_111855100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007374	chr13	+	685	2	FSM	ENSMUSG00000086480.2	ENSMUST00000132564.2	751	2	66	0	66	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAATTTTATGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	111862116	111871658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_111862190_111871046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007375	chr13	+	615	1	Genic_Genomic	ENSMUSG00000086480.2	novel	NA	NA	NA	NA	8994	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAATTTTATGTTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	111871044	111871659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_111871000_111871700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007376	chr13	+	1341	3	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	78770	0	49229	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATCCTAAGACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	112504216	112520534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_112504883_112517662_112517756_112519952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007377	chr13	+	1128	5	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	22740	-1	22740	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGCTCCTGAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	112634336	112640980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007378	chr13	-	152	1	NIC	ENSMUSG00000050377.9	novel	3680	17	NA	NA	27424	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCACATGGCCAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	112668348	112668196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr13_-_112668200_112668300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007379	chr13	-	196	2	ISM	ENSMUSG00000050377.9	ENST00000396836.6	740	5	26224	60	26224	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTATCAACAATTACAC	NA	NA	NA	NA	NA	NA	NA	NA	112669548	112668256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_112668349_112669444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007380	chr13	-	238	2	ISM	ENSMUSG00000050377.9	ENST00000396836.6	740	5	25319	1296	25319	-1296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGAGTTGGAGAGCCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	112670453	112669492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_112669547_112670269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007381	chr13	-	297	2	ISM	ENSMUSG00000050377.9	ENST00000396836.6	740	5	18013	2118	18013	-2118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGAATCTGTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	112677759	112670314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_112670456_112677603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007382	chr13	-	217	2	ISM	ENSMUSG00000050377.9	ENST00000396836.6	740	5	27	9463	27	-9463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTGGCAAGTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	112695745	112677659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_112677813_112695681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007383	chr13	-	376	1	ISM	ENSMUSG00000021758.15	ENSMUST00000075748.7	2762	21	53588	5	53588	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGTTTTCCAACAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	112735247	112734871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_112734900_112735200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007384	chr13	+	1326	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	1	-55	1	55	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTGTACAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	112937397	113004231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007385	chr13	+	687	3	ISM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	210	10882	139	-10630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGGAGGGCAGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	112937535	112993546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_112937801_112971392_112971548_112993279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007386	chr13	-	322	1	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	59659	0	59659	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGAATTTCAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	113004273	113003951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_113004000_113004300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007387	chr13	+	305	1	Genic_Genomic	ENSMUSG00000021759.15	novel	NA	NA	NA	NA	66728	1	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGTAGTCAGTTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	113004124	113004429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_+_113004100_113004400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007388	chr13	-	361	3	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	31807	23861	31807	-23861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGTGGCCCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	113032125	113027812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_113027882_113028421_113028595_113032006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007389	chr13	-	381	3	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	25822	28055	25822	-28055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATGAACCCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	113038110	113032006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_113032158_113035298_113035425_113038006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007390	chr13	-	377	3	ISM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	9695	45686	9695	-45686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGTATATTTCATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	113054237	113049637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_113049725_113050889_113051065_113054122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007391	chr13	+	857	3	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	14882	8178	14882	-8178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGCTGTGAGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	113081040	113083876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_113081194_113081603_113081728_113083296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007392	chr13	+	905	3	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	17135	2572	17135	-2572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTTCAGGAAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	113083293	113089482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_113083909_113084745_113084890_113089336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007393	chr13	+	586	4	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	23177	-1	23177	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAATCTTCATTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	113089335	113092055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_113089514_113090207_113090349_113091681_113091827_113091933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007394	chr13	-	590	2	NNC	ENSMUSG00000021760.6	novel	769	2	NA	NA	3093	18107	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAACAGAGTGAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	113179834	113161179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_113161222_113179286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007395	chr13	-	1047	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	2	-7	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTTTTTTTCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	113182942	113179285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_113179834_113181965_113182228_113182705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007396	chr13	-	553	1	Genic_Genomic	ENSMUSG00000021760.6	novel	NA	NA	NA	NA	3089	1	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTTTTTTTCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	113179838	113179285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr13_-_113179300_113179800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007397	chr13	-	634	2	FSM	ENSMUSG00000021760.6	ENSMUST00000231962.2	769	2	0	135	0	-129	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACTTTCTCTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	113182927	113179421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_113179834_113182705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007398	chr13	-	447	1	ISM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	25939	0	25792	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTGTCTTTTATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	113729161	113728714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_113728700_113729200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007399	chr13	-	468	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	1626	2353	1479	236	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGCCAACTCTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	113753474	113731067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_113731399_113753337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007400	chr13	-	727	2	FSM	ENSMUSG00000042364.12	ENST00000326277.5	1869	2	1143	-1	1143	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCGCCACGTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	113753810	113731302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_113731399_113753179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007401	chr13	+	1444	2	ISM	ENSMUSG00000042348.11	ENSMUST00000224068.2	1002	4	173024	-726	173024	726	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTCCACTTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	114104181	114292538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_114104327_114291239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007402	chr13	+	1424	1	ISM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	361533	0	361416	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCTGACTGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	114292573	114293997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_114292600_114294000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007403	chr13	-	463	1	ISM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	100001	0	100001	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCTGTTATGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	114424793	114424330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_114424300_114424800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007404	chr13	-	746	4	ISM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	36729	655	36729	-655	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATAAACTCCAAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	114488065	114424985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007405	chr13	-	504	3	ISM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	48	29062	48	-29062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACTTTGCATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	114524746	114453392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_114453566_114487983_114488063_114524494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007406	chr13	+	256	2	ISM	ENSMUSG00000015536.15	ENSMUST00000184214.8	551	6	2516	1574	2493	-1574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTCTCTCTTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	114957334	114961210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_114957483_114961102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007407	chr13	+	233	2	ISM	ENSMUSG00000015536.15	ENSMUST00000184214.8	551	6	6289	928	6266	-928	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCCCGTGAGACACAT	NA	NA	NA	NA	NA	NA	NA	NA	114961107	114961856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_114961231_114961746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007408	chr13	+	261	2	ISM	ENSMUSG00000015536.15	ENSMUST00000184672.8	1447	7	6916	2451	6916	30	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTGAGTGAGGAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	114961757	114962814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_114961898_114962693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007409	chr13	+	213	1	ISM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	11059	0	11012	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGAAAGGATTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	114965853	114966066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_114965900_114966100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007410	chr13	-	1247	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	268	85	268	-85	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGGGTTCACATTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	115226454	115224975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_115225498_115225729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007411	chr13	-	1136	1	FSM	ENSMUSG00000114551.2	ENSMUST00000225901.2	1217	1	81	0	81	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCAGGACCACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115666227	115665091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_115665100_115666200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007412	chr13	+	201	1	FSM	ENSMUSG00000061669.7	ENSMUST00000081679.7	354	1	225	-72	225	72	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGGCATAGCAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	116290541	116290742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_116290500_116290700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007413	chr13	-	685	2	ISM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	129642	31535	129602	-31535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGTAAACACTTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	117032317	117031171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_117031731_117032191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007414	chr13	-	718	3	NNC	ENSMUSG00000021725.10	novel	2376	23	NA	NA	122524	-31567	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACCATCATCGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	117039395	117031203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr13_-_117031722_117032187_117032318_117039325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007415	chr13	+	1182	2	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	51773	244	51773	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATGATAGTTAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	117408580	117410707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_117408636_117409580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007416	chr13	+	1193	1	ISM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	52951	0	52951	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCCTTACTGTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117409758	117410951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_117409800_117411000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007417	chr13	-	3256	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	64	-1	64	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGAGGCCTGAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	118523724	118514915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007418	chr13	+	577	4	ISM	ENSMUSG00000025451.16	ENSMUST00000173627.8	1233	10	-75	16329	52	-16329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGAACATAAATTACACAT	NA	NA	NA	NA	NA	NA	NA	NA	119565593	119577412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007419	chr13	+	397	3	ISM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	106	19336	106	-19184	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTCTGAATCATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	119565774	119574557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_119565949_119566695_119566866_119574504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007420	chr13	+	535	4	ISM	ENSMUSG00000025451.16	ENST00000338972.8	1476	10	7807	9546	7807	-9365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTTTTGTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	119574504	119584376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_119574691_119577294_119577412_119582278_119582385_119584250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007421	chr13	+	782	5	ISM	ENSMUSG00000025451.16	ENST00000338972.8	1476	10	19740	-7	19740	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTAGCTGGTTAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	119586437	119593929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007422	chr13	+	404	1	ISM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	28387	0	26826	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	119593523	119593927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_119593500_119593900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007423	chr13	+	289	1	ISM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	28999	9	27759	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAATGGTATCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	119594456	119594745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_119594500_119594700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007424	chr13	-	958	1	FSM	ENSMUSG00000074635.4	ENSMUST00000238285.2	1133	1	175	0	175	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTCTGTGGCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	119624745	119623787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_119623800_119624700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007425	chr13	+	1637	2	FSM	ENSMUSG00000074634.13	ENSMUST00000178948.2	1648	2	-3	14	-3	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTTTTGCTGGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	120068182	120071980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_+_120068567_120070727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007426	chr13	+	2004	4	ISM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	13994	72	13976	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCACGGAGCGTTAACCA	NA	NA	NA	NA	NA	NA	NA	NA	120165975	120169546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_120166068_120166592_120166719_120166883_120167048_120167924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007427	chr13	+	1724	1	ISM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	16073	0	16073	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTATGCCTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	120168072	120169796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_+_120168100_120169800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007428	chr13	-	424	1	ISM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	25108	87	24590	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGTAAAATCAATATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120227233	120226809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr13_-_120226800_120227200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007429	chr13	-	602	3	FSM	ENSMUSG00000094870.9	ENST00000509931.5	964	3	30	332	30	185	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCCATTTTCAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	120251793	120227142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr13_-_120227594_120250455_120250498_120251684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007430	chr14	+	1099	3	ISM	ENSMUSG00000058317.13	ENSMUST00000076133.10	606	5	258007	-717	258007	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCTGTACCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3839261	3896119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_3839398_3882697_3882846_3895304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007431	chr14	+	816	1	NIC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	314049	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCTGTACCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3895303	3896119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_3895300_3896100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007432	chr14	+	1052	4	ISM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	5427	0	5427	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCTGTGTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4143263	4186974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_4143317_4184427_4184561_4185274_4185423_4186256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007433	chr14	+	1929	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	-3	-4	-3	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATCTTTTATGTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4198625	4201877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007434	chr14	+	1896	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4198649	4201873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4198738_4199240_4199418_4199652_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007435	chr14	+	1843	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	-3	-34	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTAAAGTAATAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	4198663	4201839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4198738_4199245_4199418_4199652_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007436	chr14	+	881	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	4198668	4200736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007437	chr14	+	1839	4	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4198704	4201873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4198738_4199235_4199418_4199652_4199790_4200386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007438	chr14	+	802	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	4198725	4200736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007439	chr14	+	1811	3	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4199232	4201873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4199418_4199652_4199790_4200384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007440	chr14	+	1799	3	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4199233	4201873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4199418_4199668_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007441	chr14	+	1812	3	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4199233	4201873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4199418_4199652_4199790_4200382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007442	chr14	+	598	3	FSM	ENSMUSG00000012405.17	ENST00000439981.1	596	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTAATACACGTGATATTT	NA	NA	NA	NA	NA	NA	NA	NA	4199246	4200679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_4199408_4199652_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007443	chr14	+	1765	3	NNC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4199287	4201873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_4199422_4199652_4199790_4200379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007444	chr14	+	2427	1	ISM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	32647	0	32647	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGTTTTGTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	4263215	4265642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_4263200_4265600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007445	chr14	-	199	1	FSM	ENSMUSG00000114517.2	ENSMUST00000226070.2	311	1	115	-3	115	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTGCCTTGTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	4373857	4373658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_4373700_4373900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007446	chr14	-	462	4	ISM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	24672	39814	24672	-39814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCAAACTAAGGAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	6079912	6074114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_6074172_6074254_6074357_6076430_6076605_6079783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007447	chr14	+	967	6	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	36	2042	36	-2042	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCGTACAGCCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	8348814	8355547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007448	chr14	+	878	6	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	792	402	792	-402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCCACTGCAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	8349570	8357187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007449	chr14	+	941	6	ISM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	4008	0	4008	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTCTTAAACATACA	NA	NA	NA	NA	NA	NA	NA	NA	8352786	8357589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007450	chr14	-	1242	2	ISM	ENSMUSG00000021738.6	ENST00000484332.1	2682	9	32292	0	32292	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTCACTCTTGAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	8369769	8366122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_8366457_8368861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007451	chr14	+	326	4	ISM	ENSMUSG00000053453.10	ENST00000469584.5	506	6	32	1085	32	-1085	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGAGCTTTACCGG	NA	NA	NA	NA	NA	NA	NA	NA	8508526	8518558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_8508579_8516224_8516353_8516600_8516688_8518499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007452	chr14	+	341	4	ISM	ENSMUSG00000053453.10	ENST00000469584.5	506	6	7729	179	7729	-179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTGAATATATATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	8516223	8519464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_8516353_8516600_8516688_8518499_8518558_8519397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007453	chr14	+	301	4	ISM	ENSMUSG00000053453.10	ENST00000469584.5	506	6	8100	-1	8100	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCAAAGTTACTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	8516594	8519644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_8516688_8518499_8518558_8519397_8519465_8519561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007454	chr14	+	510	4	ISM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	10015	0	10006	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	8518500	8520751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_8518558_8519397_8519465_8519561_8519632_8520435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007455	chr14	+	888	3	ISM	ENSMUSG00000054423.15	ENST00000490353.2	1712	7	-206	126933	7	-126933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGACAGTGCTAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	9646818	9764051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_9647460_9754367_9754482_9763918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007456	chr14	+	694	2	ISM	ENSMUSG00000054423.15	ENST00000283269.13	4561	28	446242	0	446029	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCATAGAGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	10093053	10096558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_10093159_10095969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007457	chr14	+	591	1	NIC	ENSMUSG00000054423.15	novel	5445	28	NA	NA	448943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGCATAGAGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	10095967	10096558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_10096000_10096600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007458	chr14	-	946	1	Genic_Genomic	ENSMUSG00000033111.17	novel	NA	NA	NA	NA	16908	8	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTAAAGGCTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	10167469	10166523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_10166500_10167500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007459	chr14	-	938	2	ISM	ENSMUSG00000033111.17	ENSMUST00000225773.2	417	4	12220	-698	12220	50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGCGAGCTTTCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	10172157	10167728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_10168616_10172106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007460	chr14	-	771	1	NIC	ENSMUSG00000114378.2	novel	3124	7	NA	NA	17238	-22470	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTTGAGTCTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	10168549	10167778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_10167800_10168500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007461	chr14	-	350	3	ISM	ENSMUSG00000033111.17	ENSMUST00000223702.2	900	6	16954	211	15803	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGTTTGGGACAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	10168574	10167989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_10168192_10168274_10168365_10168516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007462	chr14	-	453	2	ISM	ENSMUSG00000033111.17	ENSMUST00000223631.2	1014	5	14337	278	14334	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAACCCACACCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	10170043	10168225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_10168616_10169980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007463	chr14	+	1209	1	Genic_Genomic	ENSMUSG00000097148.3	novel	NA	NA	NA	NA	74795	12	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATTGACTTTTGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	11187841	11189050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_11187800_11189000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007464	chr14	+	305	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACAGTGTTTGTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	13670177	13670482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr14_+_13670200_13670500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007465	chr14	-	1649	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGGTTGTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	14255632	14246209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_14247587_14249552_14249623_14255430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007466	chr14	+	1276	8	FSM	ENSMUSG00000021748.10	ENST00000474765.1	1284	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTAAATTTGCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	14298251	14303638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303161_14303291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007467	chr14	+	1118	5	ISM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	2578	0	1082	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	NA	NA	NA	NA	NA	NA	NA	14299325	14303777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007468	chr14	+	704	3	NNC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	2104	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	NA	NA	NA	NA	NA	NA	NA	14300347	14303777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_14300424_14302918_14303061_14303291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007469	chr14	-	506	5	ISM	ENSMUSG00000033885.16	ENST00000302779.9	1794	17	49872	0	49825	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTAACGCTGAGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	14321693	14305611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_14305827_14317615_14317693_14318191_14318279_14318768_14318847_14321644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007470	chr14	-	581	7	ISM	ENSMUSG00000033885.16	ENST00000383715.8	1659	17	43241	8580	43217	-8580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGCCCAGTCACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	14328301	14318256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007471	chr14	-	773	1	Genic_Genomic	ENSMUSG00000023156.5	novel	NA	NA	NA	NA	985	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTGTATATACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	14378710	14377937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_14377900_14378700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007472	chr14	-	759	3	ISM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	7132	1289	-2579	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCTGAAATACAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	14382274	14379227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_14379866_14380975_14381055_14382232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007473	chr14	-	1094	1	Genic_Genomic	ENSMUSG00000025277.15	novel	NA	NA	NA	NA	52754	3	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAACACCCAGGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	14414100	14413006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_14413000_14414100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007474	chr14	-	1375	4	ISM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	42557	126	42557	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATAATGTGCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	14424297	14413233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007475	chr14	-	1137	1	ISM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	132495	0	80672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	14519321	14518184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_14518200_14519300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007476	chr14	-	680	2	ISM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	35692	43165	35692	-43165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCATCCCCTCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	14564301	14562444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_14562621_14563797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007477	chr14	-	328	2	ISM	ENSMUSG00000043004.14	ENSMUST00000161247.2	419	4	85336	-113	85336	16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGCATGTTTAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	19941425	19925747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_19926004_19941353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007478	chr14	-	2316	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCCTTCAGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20133252	20125703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_20127713_20132945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007479	chr14	-	2303	2	NNC	ENSMUSG00000045107.6	novel	2315	2	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGATTCCTTCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	20133250	20125707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_20127706_20132945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007480	chr14	+	607	5	ISM	ENSMUSG00000021809.11	ENST00000372997.3	749	6	-8	1823	-8	4	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCGTGGGGGTGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	20350652	20359869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007481	chr14	+	629	5	ISM	ENSMUSG00000021809.11	ENST00000357321.9	940	8	11513	0	5644	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAAGTCTTAACTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	20356304	20361692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007482	chr14	+	329	3	NNC	ENSMUSG00000021809.11	novel	674	6	NA	NA	5678	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCGTGGGGGTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	20356338	20359868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_20356432_20357760_20357868_20359739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007483	chr14	+	467	4	ISM	ENSMUSG00000021809.11	ENST00000372997.3	749	6	5694	0	5694	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAAGTCTTAACTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	20356354	20361692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20356435_20357760_20357868_20359739_20359866_20361538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007484	chr14	+	157	1	NIC	ENSMUSG00000021809.11	novel	1633	10	NA	NA	10875	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAAGTCTTAACTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	20361535	20361692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_20361500_20361700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007485	chr14	+	491	1	NIC	ENSMUSG00000021809.11	novel	2494	9	NA	NA	15429	16	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAGGAGAAGAGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	20366089	20366580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_20366100_20366600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007486	chr14	-	432	1	ISM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	27838	0	26493	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTGCTTCCTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	20370351	20369919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20369900_20370400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007487	chr14	-	579	2	ISM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	23538	732	22193	144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCAGGGCTACACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20374651	20370651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20371020_20374440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007488	chr14	-	431	3	ISM	ENSMUSG00000021810.4	ENST00000430082.6	1932	13	8531	15349	8531	-15349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTGGTAATGTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	20388313	20386144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20386266_20386949_20387143_20388196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007489	chr14	-	434	3	ISM	ENSMUSG00000021810.4	ENST00000430082.6	1932	13	8308	16152	8308	-16152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATATCTTTCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	20388536	20386947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20387143_20388196_20388376_20388476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007490	chr14	-	193	1	Genic_Genomic	ENSMUSG00000021811.8	novel	NA	NA	NA	NA	4082	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTTTTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	20434896	20434703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_20434700_20434900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007491	chr14	-	407	3	ISM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	797	678	797	-678	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAAAATGATGACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	20438181	20435383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20435547_20435867_20435955_20438024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007492	chr14	-	332	2	ISM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	461	3392	461	-3392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAAGAGATTCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20438517	20438097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20438280_20438367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007493	chr14	-	319	3	ISM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	154	3549	154	-3549	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAAGACATACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	20438824	20438254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20438280_20438367_20438509_20438671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007494	chr14	-	172	2	NNC	ENSMUSG00000021811.8	novel	1631	5	NA	NA	188	-3754	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACGATGAACAGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	20438790	20438459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_20438509_20438667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007495	chr14	-	426	1	Genic_Genomic	ENSMUSG00000049960.5	novel	NA	NA	NA	NA	3909	4	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCCAGTTTTCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	20439793	20439367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_20439400_20439800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007496	chr14	-	796	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	26	1750	26	-1750	multi-exon	TRUE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGGTATCCAGTACGT	NA	NA	NA	NA	NA	NA	NA	NA	20443676	20441121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_20441529_20441960_20442222_20443548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007497	chr14	-	1291	1	ISM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	23583	0	23361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTATGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20506618	20505327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20505300_20506600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007498	chr14	-	1332	3	ISM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	19676	183	19676	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCCTAAAATGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	20510303	20505527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20506670_20508637_20508751_20510226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007499	chr14	-	1007	4	ISM	ENSMUSG00000021815.5	ENST00000299432.7	1436	7	10406	-16	10406	16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATGATTTTTCAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	20536341	20533090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20533310_20533617_20533712_20534702_20535270_20536214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007500	chr14	-	1065	4	ISM	ENSMUSG00000021815.5	ENST00000299432.7	1436	7	9001	1614	9001	-1614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCATTCCATCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	20537746	20534720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20535270_20536214_20536340_20537092_20537249_20537511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007501	chr14	-	901	2	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	42866	12586	42866	-12586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCTCATTGGCAGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	20615108	20611582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20612311_20614935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007502	chr14	-	792	2	ISM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	127	55122	127	-55122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCGCCATAACGTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	20657847	20654118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20654213_20657149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007503	chr14	-	1134	5	FSM	ENSMUSG00000068697.8	ENST00000359322.5	1192	5	59	-1	59	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	20705370	20699160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_20699678_20700556_20700723_20701090_20701336_20703691_20703871_20705343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007504	chr14	-	849	3	NNC	ENSMUSG00000068697.8	novel	1192	5	NA	NA	4167	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTGTGAAGGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	20701262	20699161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_20699673_20700556_20700723_20701090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007505	chr14	-	2326	1	ISM	ENSMUSG00000039376.14	ENSMUST00000057090.12	4394	4	7034	1	3302	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTGCGTCTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	20711340	20709014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20709000_20711300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007506	chr14	+	1133	1	ISM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	19399	13	19364	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAACCAGTATCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	20743774	20744907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20743800_20744900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007507	chr14	+	2381	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	69	1713	69	-1713	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTAATACTGAGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	20745104	20749371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_20745767_20745855_20746482_20748278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007508	chr14	+	1123	1	ISM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	4926	0	4926	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCTTTATTACATT	NA	NA	NA	NA	NA	NA	NA	NA	20749961	20751084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20750000_20751100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007509	chr14	+	621	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	-2	-3	-2	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCATTTCTTCTAATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	20753071	20754496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_20753266_20753357_20753477_20754188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007510	chr14	+	608	3	NNC	ENSMUSG00000063787.5	novel	616	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	20753073	20754493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_20753266_20753357_20753477_20754196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007511	chr14	+	550	2	FSM	ENSMUSG00000063787.5	ENSMUST00000224633.2	557	2	10	-3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGCCATTTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	20753228	20754490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_20753477_20754188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007512	chr14	+	427	2	ISM	ENSMUSG00000021819.12	ENSMUST00000224751.2	5951	26	6868	7588	6672	-7588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTGCTAGCCAACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	20764588	20766099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20764936_20766019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007513	chr14	-	1359	1	Genic_Genomic	ENSMUSG00000021820.19	novel	NA	NA	NA	NA	57735	2	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTATTGCTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	20786299	20784940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_20784900_20786300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007514	chr14	-	2358	4	ISM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	54659	-3	54595	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCATTGTGTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	20789439	20784947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007515	chr14	-	661	1	NIC	ENSMUSG00000021820.19	novel	3847	23	NA	NA	56542	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTAAAACAATTCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	20787492	20786831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_20786800_20787500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007516	chr14	-	661	3	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	54648	219	54595	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTGTGTTTAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	20789439	20787050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20787572_20788916_20789012_20789394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007517	chr14	-	371	4	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	28556	23632	28503	-23632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCACTAGCCTTCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	20815531	20810463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20810549_20814213_20814337_20814928_20815024_20815463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007518	chr14	-	119	2	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	27826	29173	27773	-29173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAGAGCAGCAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20816261	20816004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20816083_20816220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007519	chr14	-	119	2	ISM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	46	55804	-7	-55804	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAATATGCTGCAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	20844041	20842635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_20842682_20843968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007520	chr14	+	209	2	ISM	ENSMUSG00000021822.4	ENSMUST00000022368.4	2342	11	2751	3546	2751	-3546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGAGATGAAGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	20889478	20889907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20889623_20889842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007521	chr14	+	209	2	ISM	ENSMUSG00000021822.4	ENSMUST00000022368.4	2342	11	3884	2326	3884	-2326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCGGACCCAGAGTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	20890611	20891127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20890707_20891013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007522	chr14	+	205	2	ISM	ENSMUSG00000021822.4	ENSMUST00000022368.4	2342	11	4288	1054	4288	-1054	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCTGGGGCCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	20891015	20892399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_20891163_20892341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007523	chr14	+	1060	3	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	99844	1273	99844	-1273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACTAGAGGAACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	21079309	21082471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_21079448_21079849_21079955_21081654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007524	chr14	-	2429	1	ISM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	18580	0	18325	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAATGACTGCACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21083938	21081509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_21081500_21083900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007525	chr14	+	836	1	ISM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	103443	0	103443	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAATTGAGGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	21082908	21083744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_21082900_21083700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007526	chr14	-	2423	3	ISM	ENSMUSG00000021824.14	ENSMUST00000022371.10	1770	9	14038	-1381	14011	1381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACGTGATAAAAATGATCA	NA	NA	NA	NA	NA	NA	NA	NA	21088252	21084700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_21086772_21087180_21087326_21088045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007527	chr14	+	385	4	ISM	ENSMUSG00000039197.11	ENST00000673352.1	1601	9	-3	213624	-3	-212966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCACTACCAACCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	21142432	21285075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_21142510_21153887_21153942_21219867_21219947_21284900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007528	chr14	+	363	3	ISM	ENSMUSG00000039197.11	ENST00000673352.1	1601	9	77432	208058	77432	-207400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCCGCTCATGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	21219867	21290641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_21219947_21284900_21285074_21290530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007529	chr14	+	1445	7	ISM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	158677	-1	142461	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGATTTTTTTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21284896	21498631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007530	chr14	+	358	1	ISM	ENSMUSG00000039197.11	ENST00000673352.1	1601	9	355845	61	355845	1	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTGTCTTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21498280	21498638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_21498300_21498600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007531	chr14	-	398	1	ISM	ENSMUSG00000021768.16	ENSMUST00000184703.8	902	4	7684	1	6609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTTTGTATGACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21783860	21783462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_21783500_21783900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007532	chr14	-	479	2	ISM	ENSMUSG00000021768.16	ENSMUST00000120984.9	976	3	5384	100	5384	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCCCTCAGCAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	21785085	21783562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_21783920_21784963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007533	chr14	-	403	2	ISM	ENSMUSG00000021768.16	ENSMUST00000120984.9	976	3	121	1496	121	-1242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCGGAAGGGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21790348	21784958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_21785185_21790171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007534	chr14	-	400	2	ISM	ENSMUSG00000021768.16	ENSMUST00000075040.9	1745	8	1010	12915	1010	-12661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCAGGTCAAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	21797680	21796377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_21796586_21797488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007535	chr14	+	1037	5	ISM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	24520	199	23499	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGTATCATCAGAGTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	21825118	21843171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007536	chr14	+	1404	7	ISM	ENSMUSG00000021771.15	ENST00000313132.8	1256	9	1521	-360	1377	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCAGTTTCTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21883891	21895947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007537	chr14	+	1128	4	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	5985	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCAGTTTCTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21888499	21895947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_21888685_21890486_21890638_21893949_21894008_21895213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007538	chr14	-	1501	1	ISM	ENSMUSG00000039081.11	ENSMUST00000043409.9	4216	3	4142	0	4142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTATTTTTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	22035527	22034026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_22034000_22035500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007539	chr14	-	389	2	ISM	ENSMUSG00000063142.16	ENST00000457953.6	3476	28	494045	-4	202277	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTTTAAAGCCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	23359326	23349940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23350111_23359107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007540	chr14	-	169	1	ISM	ENSMUSG00000063142.16	ENSMUST00000145596.3	12094	30	704814	7586	211490	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTTTTTAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	23350113	23349944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23349900_23350100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007541	chr14	-	1624	1	NIC	ENSMUSG00000063142.16	novel	4524	29	NA	NA	203300	1	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTATTGTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23358303	23356679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_23356700_23358300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007542	chr14	-	1915	3	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	335871	8270	197217	-671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGCGGCTGCAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	23364386	23357732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23359333_23361716_23361836_23364190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007543	chr14	-	328	2	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	319218	14727	180564	-5107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCTACAGCTCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	23381039	23364189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23364386_23380907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007544	chr14	-	438	3	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	286196	31445	147542	-21825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTCTATCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	23414061	23380907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23381039_23387012_23387127_23413868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007545	chr14	-	519	3	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	282524	37565	143870	-27945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCACGGAACTCGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	23417733	23387027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23387127_23413868_23414062_23417506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007546	chr14	-	352	2	ISM	ENSMUSG00000063142.16	ENSMUST00000112423.10	3664	28	276926	68043	138272	-58423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAAGTCGCACTATTT	NA	NA	NA	NA	NA	NA	NA	NA	23423331	23417505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23417732_23423205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007547	chr14	-	357	4	ISM	ENSMUSG00000063142.16	ENSMUST00000163322.3	3162	26	361250	64123	69481	-64123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGGAACCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	23492122	23423205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23423330_23436327_23436422_23486017_23486095_23492060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007548	chr14	-	269	2	ISM	ENSMUSG00000063142.16	ENST00000404771.8	3505	29	377563	86382	85795	55734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGGCCCCCCTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	23475808	23436326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23436422_23475634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007549	chr14	-	206	2	ISM	ENSMUSG00000063142.16	ENST00000404771.8	3505	29	367285	125727	75517	16389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGTTAATGATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	23486086	23475671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23475809_23486017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007550	chr14	-	269	2	ISM	ENSMUSG00000063142.16	ENST00000640632.1	2423	8	16839	21107	16839	-21107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGACCATTCACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	23544764	23513167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23513279_23544606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007551	chr14	-	304	3	ISM	ENSMUSG00000063142.16	ENST00000640632.1	2423	8	6277	52553	6277	-8663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAAGGTAACGTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	23555326	23544613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23544763_23551192_23551263_23555241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007552	chr14	-	1022	3	ISM	ENSMUSG00000063142.16	ENST00000640632.1	2423	8	909	63181	909	-19291	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTCAAGGGATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	23560694	23555241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23555321_23558104_23558211_23559857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007553	chr14	-	287	3	ISM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	293416	19291	1648	-19291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTCAAGGGATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	23559955	23555241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23555325_23558104_23558211_23559857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007554	chr14	-	708	7	ISM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	212550	22191	59436	-22191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCCTCAATCCACATG	NA	NA	NA	NA	NA	NA	NA	NA	23640821	23558141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007555	chr14	-	208	2	ISM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	211622	104756	58508	-104756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCGGTCTCTTTTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	23641749	23640706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23640821_23641655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007556	chr14	-	211	2	ISM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	15	164242	15	-164242	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATGCATATATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	23853356	23700192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_23700255_23853207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007557	chr14	+	1618	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGGACTGGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24540784	24547031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007558	chr14	+	419	4	ISM	ENSMUSG00000025290.18	ENSMUST00000224568.2	714	6	1139	-28	1139	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTACACGTCTGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	24541973	24545919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_24542185_24543450_24543562_24545497_24545518_24545842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007559	chr14	+	360	3	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	1182	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACACGTCTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24542016	24545918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_24542185_24543450_24543567_24545842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007560	chr14	+	327	3	NNC	ENSMUSG00000025290.18	novel	1613	5	NA	NA	1222	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACACGTCTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24542056	24545918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_24542185_24543450_24543574_24545842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007561	chr14	+	129	2	ISM	ENSMUSG00000025290.18	ENSMUST00000223999.2	525	7	2653	1776	2616	-1363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGCCATTGGGCACGGT	NA	NA	NA	NA	NA	NA	NA	NA	24543450	24544137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_24543562_24544119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007562	chr14	+	560	2	ISM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	4093	521	4093	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAACATAGAATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	25698686	25700371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_25698766_25699890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007563	chr14	+	541	1	ISM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	5758	0	5758	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCTCTGGTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	25700351	25700892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_25700400_25700900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007564	chr14	-	285	1	ISM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	57113	0	57113	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCGTGAGTTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	25712350	25712065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_25712100_25712400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007565	chr14	-	317	2	ISM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	49310	3547	49310	-3547	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGAGGAGGCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	25720153	25715612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_25715827_25720050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007566	chr14	-	309	2	ISM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	322	45368	322	-45368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAACTCAGCCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	25769141	25757433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_25757636_25769034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007567	chr14	-	868	1	ISM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	3505	0	3083	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGTTGCCTCGATCA	NA	NA	NA	NA	NA	NA	NA	NA	25924591	25923723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_25923700_25924600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007568	chr14	-	1336	1	ISM	ENSMUSG00000021870.18	ENST00000671191.1	5530	25	120374	45	119111	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTTGAGTTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	26135662	26134326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_26134300_26135700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007569	chr14	-	1980	5	ISM	ENSMUSG00000021870.18	ENSMUST00000090359.11	4076	22	106152	266	106152	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGGAAGGGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	26148621	26134820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007570	chr14	-	1362	2	ISM	ENSMUSG00000021870.18	ENSMUST00000139075.8	4508	23	269	68608	255	-68608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCTGAAGAAAGTCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	26255781	26204058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_26204122_26254482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007571	chr14	-	1401	2	ISM	ENSMUSG00000021870.18	ENST00000295951.7	5368	22	6	120155	6	-119032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTCGCTATAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	26256106	26254482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_26255780_26256002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007572	chr14	+	2159	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	24	-18	24	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTGACAAGTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	26359252	26378431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007573	chr14	-	962	1	ISM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	8964	0	8641	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTGGGTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	26382074	26381112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_26381100_26382100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007574	chr14	-	255	1	ISM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	4357	5314	4034	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTACATTTTATAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26386681	26386426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_26386400_26386700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007575	chr14	-	609	3	FSM	ENSMUSG00000043702.10	ENST00000487257.1	2273	3	1068	596	1068	-596	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAATAGTACACCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	26389647	26387022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_26387250_26387474_26387612_26389402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007576	chr14	+	499	2	ISM	ENSMUSG00000021879.14	ENST00000351747.6	9330	56	93250	95305	14828	22576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTATGAGGTATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	26507813	26518305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_26507980_26517972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007577	chr14	+	512	2	ISM	ENSMUSG00000021879.14	ENST00000351747.6	9330	56	120010	76945	41588	40936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTACTTAGTAATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26534573	26536665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_26534782_26536361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007578	chr14	-	1612	1	ISM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	50633	0	50633	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGTATGAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	26642556	26640944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_26640900_26642600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007579	chr14	+	386	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	152	39337	152	-39337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTTCAGCCAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	27083348	27084830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27083651_27084746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007580	chr14	+	277	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	1550	22451	1550	-22451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAAGCTCGGGACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	27084746	27101716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27084855_27101547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007581	chr14	+	333	3	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	18349	16269	18349	-16269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTTTTGGTCCCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	27101545	27107898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27101719_27106110_27106174_27107801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007582	chr14	+	337	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	24851	8020	24851	-8020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTGCCTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	27108047	27116147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27108127_27115889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007583	chr14	+	348	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	32744	4507	32744	-4507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGGAGAGCTGAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	27115940	27119660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27116148_27119519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007584	chr14	+	313	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	36323	1804	36323	-1804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGTGGCTCCCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	27119519	27122363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27119691_27122221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007585	chr14	+	481	2	ISM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	39024	288	39024	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATGGAACAGACAGACGC	NA	NA	NA	NA	NA	NA	NA	NA	27122220	27123879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27122409_27123586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007586	chr14	+	326	1	ISM	ENSMUSG00000021895.11	ENSMUST00000225949.2	3198	14	286989	1095	40648	3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTACTTTAACTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	27123844	27124170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27123800_27124200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007587	chr14	+	821	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	30852	20189	30852	-20189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATGATACCCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	27181761	27183742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27181809_27181897_27181970_27183040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007588	chr14	+	1176	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	30987	17528	30987	-17528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGCCTACTAGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	27181896	27186403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27181970_27183040_27183743_27186002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007589	chr14	+	1019	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	37214	9543	37214	-9543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAACCTGAAGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	27188123	27194388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27188269_27189462_27189523_27193574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007590	chr14	+	1023	3	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	42778	5353	42778	-5353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACGAGTTATTTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	27193687	27198578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27194504_27197651_27197775_27198494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007591	chr14	+	1210	4	ISM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	48170	294	48170	-294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGAATGGTAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	27199079	27203637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27199178_27201585_27201765_27201880_27202049_27202872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007592	chr14	+	878	1	ISM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	52264	1580	52145	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTGATAAATAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	27203054	27203932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_27203100_27203900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007593	chr14	+	1620	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	13	45	13	-45	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGCCGCAGCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	29690277	29697574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007594	chr14	+	1177	1	Genic_Genomic	ENSMUSG00000042682.11	novel	NA	NA	NA	NA	6180	2	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATAAAATAGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	29696444	29697621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_29696400_29697600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007595	chr14	+	551	5	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	7610	4965	7529	-4965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCTTACAGAGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	29707903	29710211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007596	chr14	+	603	4	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	10680	1463	10599	-1463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCGTTTGGTGATACCC	NA	NA	NA	NA	NA	NA	NA	NA	29710973	29713713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_29711006_29711616_29711758_29712660_29712926_29713548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007597	chr14	+	537	3	ISM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	12363	155	12282	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCGAATGTTACGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	29712656	29715021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_29712926_29713548_29713713_29714917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007598	chr14	+	744	2	ISM	ENSMUSG00000021962.10	ENST00000294241.10	1827	9	25872	3967	25872	-3967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGGAAAAGGAACCATGG	NA	NA	NA	NA	NA	NA	NA	NA	30227502	30241480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30227642_30240875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007599	chr14	+	1160	4	ISM	ENSMUSG00000021962.10	ENST00000294241.10	1827	9	39409	-15	39409	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATTGTGTTGAGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	30241039	30245462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30241635_30243546_30243613_30244684_30244904_30245182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007600	chr14	+	1498	3	ISM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	22020	104	22020	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTATTGCAATGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	30293107	30296573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30293203_30294164_30294288_30295293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007601	chr14	+	1296	1	Genic_Genomic	ENSMUSG00000021957.8	novel	NA	NA	NA	NA	24298	4	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGGAGGATTAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	30295385	30296681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_30295400_30296700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007602	chr14	+	157	2	ISM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	3977	31022	3977	-31022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTCCTGTGGCTAACGT	NA	NA	NA	NA	NA	NA	NA	NA	30380293	30382252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30380352_30382153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007603	chr14	+	230	2	ISM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	5831	29940	5831	-29940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTCTCTCAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	30382147	30383334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30382271_30383227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007604	chr14	+	143	2	ISM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	8716	24600	8716	-24600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATACAATTACTGCG	NA	NA	NA	NA	NA	NA	NA	NA	30385032	30388674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30385137_30388635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007605	chr14	+	262	3	ISM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	19810	13499	19810	-13499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTCGGCTCTCACGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	30396126	30399775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30396206_30398806_30398858_30399643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007606	chr14	+	183	2	ISM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	24868	8532	24868	-8532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCTTGCTATCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	30401184	30404742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30401333_30404707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007607	chr14	+	158	2	ISM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	28467	1485	28467	-1485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCCTTCATCCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	30404783	30411789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30404814_30411661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007608	chr14	+	116	1	ISM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	36842	0	36842	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30413158	30413274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30413200_30413300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007609	chr14	+	2112	2	ISM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	46963	868	46963	-868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGCTTTAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	30594509	30598299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30594657_30596334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007610	chr14	+	1989	1	ISM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	49632	0	49632	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGGTGGTTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30597178	30599167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30597200_30599200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007611	chr14	+	1223	3	FSM	ENSMUSG00000042485.8	ENSMUST00000040715.8	1236	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGGTTTCCCATCATGC	NA	NA	NA	NA	NA	NA	NA	NA	30601169	30603567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_30601573_30602573_30602707_30602880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007612	chr14	+	688	1	NIC	ENSMUSG00000042485.8	novel	1236	3	NA	NA	1723	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGGTTTCCCATCATGC	NA	NA	NA	NA	NA	NA	NA	NA	30602879	30603567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_30602900_30603600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007613	chr14	-	394	1	Genic_Genomic	ENSMUSG00000021917.17	novel	NA	NA	NA	NA	1149	5	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTTTTTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	30722171	30721777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_30721800_30722200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007614	chr14	-	1001	4	FSM	ENSMUSG00000021917.17	ENSMUST00000186131.7	1005	4	5	-1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30723618	30721782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007615	chr14	-	181	2	ISM	ENSMUSG00000021917.17	ENSMUST00000228736.2	702	4	588	313	588	256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAGGGGACAGAAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	30722732	30722096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30722180_30722634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007616	chr14	-	356	1	NIC	ENSMUSG00000021917.17	novel	949	4	NA	NA	612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTAAAACTTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	30722708	30722352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_30722400_30722700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007617	chr14	+	790	3	ISM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	9411	0	9411	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	30732817	30733948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30732988_30733077_30733191_30733441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007618	chr14	-	429	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	5826	0	5826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	30735283	30734389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30734592_30734679_30734747_30735123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007619	chr14	-	206	1	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	6514	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	30734595	30734389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_30734400_30734600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007620	chr14	-	441	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	5355	733	5355	-733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTTGTTTCTCGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30735754	30735122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30735282_30735385_30735523_30735609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007621	chr14	-	349	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	4920	1107	4920	-1107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGCATCCTGGAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	30736189	30735496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30735523_30735609_30735753_30736009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007622	chr14	-	336	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	4474	1291	4474	-1291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCACCAAAAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30736635	30735680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30735753_30736009_30736185_30736546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007623	chr14	-	311	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	4148	1671	4148	-1671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGCTGGAGGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	30736961	30736060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30736185_30736546_30736635_30736862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007624	chr14	-	293	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	3795	2156	3795	-2156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGGAACTGTCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	30737314	30736545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30736635_30736862_30736984_30737231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007625	chr14	-	246	2	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	2696	2841	2696	-2841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTTGTTAGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30738413	30737230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30737342_30738278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007626	chr14	-	316	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	1990	3893	1990	-3893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGTGAGTACAAACACTC	NA	NA	NA	NA	NA	NA	NA	NA	30739119	30738282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30738412_30738783_30738865_30739013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007627	chr14	-	329	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	1737	4397	1737	-4397	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTACCTTAGTATAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30739372	30738786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30738865_30739013_30739125_30739232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007628	chr14	-	298	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	1297	4623	1297	-4623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTATCTTTCCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	30739812	30739012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30739125_30739232_30739371_30739764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007629	chr14	-	313	3	ISM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	59	4892	59	-4892	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTAAAGAGGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30741050	30739281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30739371_30739764_30739824_30740885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007630	chr14	+	411	3	ISM	ENSMUSG00000042323.18	ENSMUST00000022474.14	4843	29	5332	82888	5331	-82888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGATGTGCTCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	30752798	30758016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30752949_30754365_30754510_30757899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007631	chr14	+	404	3	ISM	ENSMUSG00000042323.18	ENSMUST00000022474.14	4843	29	19818	68696	19817	-68696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTTTTTCTACATTA	NA	NA	NA	NA	NA	NA	NA	NA	30767284	30772208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30767383_30768288_30768381_30771994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007632	chr14	+	569	4	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	24691	57220	24690	-57201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGGAGCTCCTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	30772157	30783703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30772209_30774136_30774279_30776114_30776213_30783425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007633	chr14	+	741	3	ISM	ENSMUSG00000042323.18	ENSMUST00000022474.14	4843	29	35957	51270	35956	-51270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACCTGGAGGGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	30783423	30789634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30783703_30786702_30786809_30789278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007634	chr14	+	675	2	ISM	ENSMUSG00000042323.18	ENSMUST00000022474.14	4843	29	41982	43975	41981	-43975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAAGAGGTTGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	30789448	30796929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30789922_30796727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007635	chr14	+	581	4	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	49260	34082	49259	-34063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGACCATGCCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	30796726	30806841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30796940_30804506_30804693_30806105_30806189_30806742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007636	chr14	+	555	3	ISM	ENSMUSG00000042323.18	ENSMUST00000022474.14	4843	29	59274	29340	59273	-29340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTGGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	30806740	30811564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30807007_30809472_30809619_30811421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007637	chr14	-	177	1	Genic_Genomic	ENSMUSG00000058351.12	novel	NA	NA	NA	NA	41104	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGGAACTGGTAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	30809644	30809467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_30809500_30809600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007638	chr14	-	293	2	FSM	ENSMUSG00000058351.12	ENST00000476842.1	335	2	5	37	5	-37	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGACATCTCCACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	30850743	30809505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_30809645_30850589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007639	chr14	-	660	4	FSM	ENSMUSG00000058351.12	ENSMUST00000064032.10	791	4	132	-1	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCATCATTCTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	30850738	30810614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_30810984_30845678_30845733_30846478_30846567_30850589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007640	chr14	+	487	3	ISM	ENSMUSG00000042323.18	ENSMUST00000022474.14	4843	29	64021	12599	64020	-12599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGTGATACGCCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	30811487	30828305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30811580_30827303_30827488_30828094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007641	chr14	+	516	3	ISM	ENSMUSG00000042323.18	ENSMUST00000022474.14	4843	29	79918	11637	79917	-11637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAAGACTAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	30827384	30829267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30827488_30828094_30828306_30829065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007642	chr14	+	450	3	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	80646	5063	80645	-5044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTAGCATGGGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30828112	30835860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30828306_30829065_30829268_30835805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007643	chr14	+	442	3	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	88336	1555	88335	-1536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGTAAGGAGAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	30835802	30839368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30835962_30838969_30839041_30839156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007644	chr14	+	458	2	ISM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	91687	0	91686	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAGGGAGGAACAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	30839153	30840923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30839374_30840685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007645	chr14	-	439	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	13	-26	13	26	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGTTTCTTAAAAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	30850847	30846609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_30846791_30850589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007646	chr14	-	306	3	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	22797	1131	22797	-1131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACGGCAGGGCCTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	30862587	30862104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30862225_30862312_30862423_30862511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007647	chr14	-	288	2	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	21786	2261	21786	-2261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATACCGGTCCGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	30863598	30863234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30863414_30863489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007648	chr14	-	305	4	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	15869	7689	15869	-7689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGACGGCATCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	30869515	30868662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30868747_30868982_30869058_30869160_30869235_30869443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007649	chr14	-	305	3	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	14447	9029	14447	-9029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGCAGGGTCTCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30870937	30870002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30870071_30870179_30870376_30870896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007650	chr14	-	291	3	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	12145	11605	12145	-11605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAAAGGAGGCTCGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	30873239	30872578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30872678_30872755_30872834_30873125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007651	chr14	-	282	2	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	7587	15829	7587	-15829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGGTGTTGCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	30877797	30876802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30876973_30877685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007652	chr14	-	292	2	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	1525	22359	1525	-22359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACCTGTCAGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	30883859	30883332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30883427_30883661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007653	chr14	-	857	1	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	19744	0	19744	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	30893743	30892886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30892900_30893700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007654	chr14	-	890	2	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	14447	3821	14447	-3821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTAACTTCAGCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	30899040	30896707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30896844_30898286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007655	chr14	-	792	2	ISM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	4290	15348	4290	-588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGGGGCCTAGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	30909197	30908234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30908845_30909015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007656	chr14	-	1596	2	ISM	ENSMUSG00000021910.16	ENSMUST00000171735.2	1763	3	2218	-10	2217	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGCCAAGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	30926440	30923812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30925367_30926398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007657	chr14	+	722	6	FSM	ENSMUSG00000091898.9	ENSMUST00000169169.8	721	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCTGGGGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	30930268	30933687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_30930336_30931759_30931791_30932016_30932164_30932520_30932636_30933236_30933374_30933462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007658	chr14	+	718	5	NNC	ENSMUSG00000091898.9	novel	721	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTCCTGGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	30930268	30933686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_30930364_30932016_30932164_30932520_30932636_30933236_30933374_30933462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007659	chr14	+	651	5	NNC	ENSMUSG00000091898.9	novel	721	6	NA	NA	1490	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTCCTGGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	30931758	30933686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_30931791_30932016_30932164_30932524_30932636_30933236_30933374_30933462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007660	chr14	+	1142	4	ISM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	4061	131	4061	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGGCTTCCGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	30946574	30950429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30946619_30947875_30948115_30948348_30948477_30949698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007661	chr14	+	767	1	ISM	ENSMUSG00000021904.7	ENSMUST00000090180.4	4540	16	9978	1748	7281	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTCAGTCCACCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	30949794	30950561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_30949800_30950600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007662	chr14	-	828	6	ISM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	207	2925	-42	-2925	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGTGAGGAAGGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	30973007	30962815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007663	chr14	+	572	1	ISM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	34775	0	34775	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	31093369	31093941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_31093400_31093900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007664	chr14	-	259	1	Genic_Genomic	ENSMUSG00000021892.15	novel	NA	NA	NA	NA	43642	8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCACTGTTGTCTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	31095992	31095733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_31095700_31096000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007665	chr14	-	248	2	ISM	ENSMUSG00000021892.15	ENSMUST00000100730.10	2633	8	41881	1362	41881	-1362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTCGGCAGCACCAACG	NA	NA	NA	NA	NA	NA	NA	NA	31097753	31097103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31097159_31097560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007666	chr14	-	419	2	ISM	ENSMUSG00000021892.15	ENSMUST00000100730.10	2633	8	40065	1883	40065	-1883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATACTGGGTCCTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	31099569	31097624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31097822_31099347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007667	chr14	-	285	2	ISM	ENSMUSG00000021892.15	ENSMUST00000100730.10	2633	8	6006	13945	6006	-13945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCAGAGGGTAGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	31133628	31109686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31109841_31133497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007668	chr14	-	270	2	ISM	ENSMUSG00000021892.15	ENSMUST00000091903.5	2684	9	49	60297	49	-60297	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGAGCTGGGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	31157973	31156038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31156103_31157767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007669	chr14	-	3265	3	ISM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	7339	-1	7307	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTCTTGATGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	31209658	31198775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31201768_31204747_31204890_31209527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007670	chr14	-	2992	1	NIC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	15197	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTTTCTTGATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31201768	31198776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_31198800_31201800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007671	chr14	-	680	1	Genic_Genomic	ENSMUSG00000021884.19	novel	NA	NA	NA	NA	33002	2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTTCCCCAGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	31329833	31329153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_31329200_31329800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007672	chr14	-	459	3	ISM	ENSMUSG00000021884.19	ENST00000435217.6	1027	8	25390	-1	25354	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCCGTTGCTAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	31337481	31332056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31332246_31336160_31336269_31337319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007673	chr14	-	188	1	NIC	ENSMUSG00000115022.2	novel	1739	16	NA	NA	30590	-57196	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTCCGTTGCTAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	31332245	31332057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_31332100_31332200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007674	chr14	-	391	3	ISM	ENSMUSG00000021884.19	ENST00000435217.6	1027	8	24398	4136	24362	-4136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGCTACATTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	31338473	31336193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31336269_31337319_31337479_31338316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007675	chr14	-	284	3	ISM	ENSMUSG00000021884.19	ENST00000435217.6	1027	8	21839	5396	21803	-5396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGGGTTGGCCTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	31341032	31337453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31337479_31338316_31338472_31340928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007676	chr14	-	304	3	ISM	ENSMUSG00000021884.19	ENST00000435217.6	1027	8	20985	6297	20949	-6297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGGACTATGCTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	31341886	31338354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31338472_31340928_31341031_31341801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007677	chr14	-	285	3	ISM	ENSMUSG00000021884.19	ENST00000435217.6	1027	8	321	8872	285	-8872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACGTGGGGCCAGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	31362550	31340929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31341031_31341801_31341886_31362450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007678	chr14	-	293	3	ISM	ENSMUSG00000021884.19	ENST00000435217.6	1027	8	4	9762	2	-9762	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGTCTCTAAACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	31362867	31341819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31341886_31362450_31362556_31362745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007679	chr14	+	858	3	FSM	ENSMUSG00000021900.11	ENST00000673467.1	971	3	46	67	46	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCTAGAAACTTTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	31384069	31421917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_31384283_31387838_31387989_31421422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007680	chr14	+	1685	2	ISM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	24823	306	3813	-306	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCACTTTCTGTGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	31387836	31390230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_31387989_31388697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007681	chr14	+	1617	1	Genic_Genomic	ENSMUSG00000021900.11	novel	NA	NA	NA	NA	4904	8	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTCTGAGATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	31388927	31390544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_31388900_31390500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007682	chr14	-	1843	1	Genic_Genomic	ENSMUSG00000014496.9	novel	NA	NA	NA	NA	79787	4	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTTCTTTTTTACATA	NA	NA	NA	NA	NA	NA	NA	NA	31422563	31420720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_31420700_31422600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007683	chr14	-	3124	2	ISM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	79405	0	78090	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	31424260	31420724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31422564_31422975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007684	chr14	+	546	1	ISM	ENSMUSG00000021900.11	ENST00000673467.1	971	3	37415	0	37415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACGTCTGTGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	31421438	31421984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_31421400_31422000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007685	chr14	-	868	5	ISM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	73779	-15	72257	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAATCTTAATAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	31430093	31423787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007686	chr14	-	544	4	ISM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	66561	8909	65039	-8909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGTTAAGTATCAGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	31437311	31432711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_31432929_31433015_31433134_31433885_31433974_31437190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007687	chr14	-	630	1	Genic_Genomic	ENSMUSG00000021905.15	novel	NA	NA	NA	NA	4418	4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTTGAAGCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	31803148	31802518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_31802500_31803100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007688	chr14	-	777	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	104	2072	104	117	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCTTTTCAAAGATTACA	NA	NA	NA	NA	NA	NA	NA	NA	31807462	31804597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_31805204_31806863_31806939_31807366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007689	chr14	-	785	2	FSM	ENSMUSG00000021905.15	ENSMUST00000124303.9	809	2	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGGAGTCCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	31807662	31804714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_31805204_31807366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007690	chr14	+	1865	3	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	10331	535	10331	-535	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAAGTACAGTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	31898078	31900669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_31898913_31899189_31899331_31899779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007691	chr14	+	1334	1	Genic_Genomic	ENSMUSG00000056234.16	novel	NA	NA	NA	NA	12741	10	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCACTTTATACTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	31900488	31901822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_31900500_31901800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007692	chr14	+	241	1	ISM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	95361	0	95339	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTTAGATGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	32019266	32019507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32019300_32019500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007693	chr14	+	181	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	93	15381	93	-15381	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGACTTGATCACAACC	NA	NA	NA	NA	NA	NA	NA	NA	32047844	32054207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32047956_32054137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007694	chr14	+	220	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	6385	15030	6385	-15030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCCAGGAAGGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	32054136	32054558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32054241_32054442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007695	chr14	+	171	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	6715	14805	6715	-14805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAACTCCTGGCGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	32054466	32054783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32054559_32054704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007696	chr14	+	195	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	6998	13837	6998	-13837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTATCGACAAGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	32054749	32055751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32054860_32055666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007697	chr14	+	173	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	7981	12205	7981	-12205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTCACACTGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	32055732	32057383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32055814_32057291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007698	chr14	+	213	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	9537	10071	9537	-10071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGTACAGGGCAAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	32057288	32059517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32057383_32059398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007699	chr14	+	165	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	11716	9823	11716	-9823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGACCTTCCATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32059467	32059765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32059579_32059711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007700	chr14	+	159	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	11993	8362	11993	-8362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCAATGCACCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	32059744	32061226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32059841_32061163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007701	chr14	+	167	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	13466	7688	13466	-7688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCACGCAGCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	32061217	32061900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32061344_32061859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007702	chr14	+	161	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	14199	6888	14199	-6888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTGAGTGAGGAACACG	NA	NA	NA	NA	NA	NA	NA	NA	32061950	32062700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32062013_32062601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007703	chr14	+	159	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	14912	6312	14912	-6312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACACAGGTAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	32062663	32063276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32062705_32063158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007704	chr14	+	209	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	15427	5492	15427	-5492	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCCACGTGCGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	32063178	32064096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32063288_32063996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007705	chr14	+	240	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	16278	4307	16278	-4307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGTGGGTGGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	32064029	32065281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32064148_32065159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007706	chr14	+	160	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	17512	3172	17512	-3172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGCATCGTGCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	32065263	32066416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32065288_32066280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007707	chr14	+	158	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	18583	2885	18583	-2885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTGCAGATGAGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	32066334	32066703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32066460_32066670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007708	chr14	+	154	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	18959	2627	18959	-2627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGAGCTGCCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	32066710	32066961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32066743_32066839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007709	chr14	+	162	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	20698	840	20698	-840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTATTACGACTACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	32068449	32068748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32068519_32068655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007710	chr14	+	154	2	ISM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	20982	49	20982	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATACTGCCTTCAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	32068733	32069539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32068811_32069462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007711	chr14	+	127	1	NIC	ENSMUSG00000021913.9	novel	3449	24	NA	NA	21710	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTCTGAAGGAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	32069461	32069588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_32069500_32069600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007712	chr14	+	109	2	ISM	ENSMUSG00000063506.15	ENST00000249601.9	2114	9	204	95633	204	-95633	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGCCGGAGCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	32972612	32993767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32972695_32993740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007713	chr14	+	460	3	ISM	ENSMUSG00000063506.15	ENST00000417912.6	1874	8	4	24037	4	-24037	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTTGTCCTCTTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	32993746	33065363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_32993941_33020660_33020749_33065185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007714	chr14	+	439	3	ISM	ENSMUSG00000063506.15	ENST00000374172.5	1679	7	37	8118	37	-8118	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTTGGCGGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	33020694	33081282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33020749_33065185_33065363_33081074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007715	chr14	+	368	3	ISM	ENSMUSG00000063506.15	ENST00000374172.5	1679	7	44665	4881	23663	-4881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGGGGGAGGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	33065322	33084519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33065363_33081074_33081283_33084399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007716	chr14	+	1404	5	ISM	ENSMUSG00000063506.15	ENST00000374172.5	1679	7	60405	19	39403	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAGGAGCCTGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	33081062	33089381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007717	chr14	+	303	3	NNC	ENSMUSG00000063506.15	novel	1679	7	NA	NA	42738	-2961	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATAGAGGATCCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	33084397	33086439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_33084537_33085232_33085307_33086349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007718	chr14	+	1576	3	ISM	ENSMUSG00000063506.15	ENSMUST00000111955.2	2148	6	44696	-1	44696	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCCTGTCACCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	33086355	33091892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33086472_33088526_33089401_33091306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007719	chr14	-	634	1	ISM	ENSMUSG00000087639.2	ENSMUST00000137359.2	2257	2	3559	0	3559	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTATGTATATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	33088541	33087907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_33087900_33088500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007720	chr14	+	869	1	NIC	ENSMUSG00000063506.15	novel	2596	11	NA	NA	46880	8	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTCTTATGCTGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33088539	33089408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_33088500_33089400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007721	chr14	+	591	5	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	0	14186	0	-14186	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCTGAGAACATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	33326901	33346946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33327042_33334252_33334351_33336389_33336503_33344438_33344588_33346855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007722	chr14	+	679	4	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	9489	7942	-8061	-7942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTCCGTAAGTCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	33336390	33353190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33336503_33344438_33344588_33346855_33346947_33352863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007723	chr14	+	498	4	NNC	ENSMUSG00000021940.11	novel	493	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33344450	33361132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_33344588_33354862_33355079_33360276_33360344_33361054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007724	chr14	+	491	4	NNC	ENSMUSG00000021940.11	novel	493	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33344451	33361132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_33344588_33354862_33355079_33360276_33360344_33361060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007725	chr14	+	635	3	ISM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	19962	6053	2412	-6053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTATGTGATAAAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	33346863	33355079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33346947_33352863_33353199_33354862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007726	chr14	+	624	4	NNC	ENSMUSG00000021940.11	novel	1283	9	NA	NA	8484	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33352935	33361132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_33353199_33354862_33355079_33360276_33360344_33361054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007727	chr14	+	362	4	ISM	ENSMUSG00000021950.16	ENST00000611655.1	814	9	3506	4044	3485	-4044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACGGTACCTTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	33811466	33815901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33811559_33812563_33812659_33813757_33813872_33815840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007728	chr14	+	413	5	ISM	ENSMUSG00000021950.16	ENST00000611655.1	814	9	4625	3194	4604	-3194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGAGGCCATGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	33812585	33816751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33812659_33813757_33813872_33815840_33815901_33816354_33816449_33816679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007729	chr14	+	492	6	ISM	ENSMUSG00000021950.16	ENSMUST00000120077.2	1208	12	4624	5530	4624	-3497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGGCAGAAGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	33812605	33816448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007730	chr14	+	384	4	ISM	ENSMUSG00000021950.16	ENST00000611655.1	814	9	8392	-1	8371	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCAACTGTACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	33816352	33819946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33816449_33816679_33816776_33818486_33818546_33819813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007731	chr14	+	794	4	ISM	ENSMUSG00000021950.16	ENSMUST00000120077.2	1208	12	8696	-183	8696	183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAGAGCACCTCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	33816677	33822161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_33816776_33818486_33818546_33819813_33819937_33821647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007732	chr14	+	560	1	Genic_Genomic	ENSMUSG00000021950.16	novel	NA	NA	NA	NA	13989	2	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGATTTGTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	33821970	33822530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_33822000_33822500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007733	chr14	+	455	1	FSM	ENSMUSG00000078126.5	ENSMUST00000104925.5	468	1	86	-73	86	73	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTACTTCATGATTATAG	NA	NA	NA	NA	NA	NA	NA	NA	33892697	33893152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_33892700_33893200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007734	chr14	-	2104	6	FSM	ENSMUSG00000041471.10	ENST00000554755.1	2188	6	81	3	81	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTAAAACAGCAACACCA	NA	NA	NA	NA	NA	NA	NA	NA	33990781	33960797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_33960911_33963243_33963473_33970840_33970976_33971133_33971329_33981581_33981690_33989457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007735	chr14	+	719	6	ISM	ENSMUSG00000021794.17	ENST00000684338.1	2896	13	24404	2595	24404	-2595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTGTAGTACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34057258	34064221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007736	chr14	+	894	2	NNC	ENSMUSG00000021794.17	novel	2896	13	NA	NA	31220	-516	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACAGTATCACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34064074	34066300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_34064229_34065560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007737	chr14	+	720	1	ISM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	33414	405	33243	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTGGTGATAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	34066097	34066817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_34066100_34066800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007738	chr14	-	821	5	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	11123	228	11123	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGCACCACGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34299303	34283789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_34283839_34288813_34288851_34289354_34289525_34293674_34293879_34298942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007739	chr14	-	809	4	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	9799	5793	9799	-5793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGAAAGCATTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	34300627	34289354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_34289525_34293674_34293879_34298942_34299302_34300551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007740	chr14	+	1827	3	ISM	ENSMUSG00000041408.19	ENSMUST00000169910.8	4066	20	-14	53218	-14	-53218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATTGTAAGATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	34396064	34414691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_34396318_34398910_34399432_34413638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007741	chr14	-	362	1	Genic_Genomic	ENSMUSG00000041028.17	novel	NA	NA	NA	NA	14687	1	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTAGTTGGGTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	36842409	36842047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_36842000_36842400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007742	chr14	-	1113	1	ISM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	13318	730	13205	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTATTGCTGTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36843891	36842778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_36842800_36843900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007743	chr14	-	1338	3	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	9048	427	9048	-427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGGTTTTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	36848048	36843207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_36844184_36847116_36847289_36847858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007744	chr14	-	449	3	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	7443	4358	7443	-4358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATGATCCCATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	36849653	36847138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_36847289_36847858_36848048_36849543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007745	chr14	-	417	3	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	4361	5102	4361	-5102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTCTTTGCGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	36852735	36847882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_36848048_36849543_36849653_36852592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007746	chr14	-	365	3	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	3490	6761	3490	-6761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTGTTAAATTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	36853606	36849541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_36849653_36852592_36852735_36853494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007747	chr14	-	527	4	ISM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	1334	9812	1334	-9812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTAGCTACTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36855762	36852592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_36852735_36853494_36853607_36855127_36855228_36855589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007748	chr14	-	252	2	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	3490	-9812	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTAGCTACTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36853606	36852592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_36852735_36853496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007749	chr14	-	328	3	ISM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	1	13079	1	-12347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGGAAGTTAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	36857208	36855127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_36855228_36855589_36855761_36857151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007750	chr14	-	1542	1	Genic_Genomic	ENSMUSG00000041014.18	novel	NA	NA	NA	NA	297810	11	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTACTGTAGTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	38092439	38090897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_38090900_38092400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007751	chr14	-	1672	4	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	286535	586	286535	-586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGGTGCAAGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	38103714	38091702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_38092998_38093233_38093306_38098290_38098462_38103580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007752	chr14	-	1507	4	ISM	ENSMUSG00000041014.18	ENST00000556918.5	1133	7	270938	-575	270938	519	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCACCGTCTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38119311	38091914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_38092998_38098290_38098462_38103580_38103709_38119186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007753	chr14	-	1063	1	Genic_Genomic	ENSMUSG00000037824.7	novel	NA	NA	NA	NA	26773	1	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGTGATAAATTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	40629463	40628400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_40628400_40629500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007754	chr14	-	1471	6	ISM	ENSMUSG00000037824.7	ENST00000341863.10	948	7	15618	-634	15618	634	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAATCCTGACTGACC	NA	NA	NA	NA	NA	NA	NA	NA	40640618	40629085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40638759_40638907_40640586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007755	chr14	-	677	4	NNC	ENSMUSG00000037824.7	novel	2338	7	NA	NA	17441	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCCTTATGGAGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	40638795	40629720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_40630087_40631541_40631691_40635318_40635445_40638759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007756	chr14	-	793	6	FSM	ENSMUSG00000037824.7	ENST00000481124.5	799	6	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTATGTGGAGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	40688832	40629782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40656144_40656243_40688732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007757	chr14	-	297	2	ISM	ENSMUSG00000037824.7	ENST00000372164.7	2338	7	18729	6869	18729	-5536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATATGCCACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	40637507	40635318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_40635445_40637336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007758	chr14	-	374	4	ISM	ENSMUSG00000037824.7	ENSMUST00000224209.2	2477	8	42	9020	0	-7641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCCGGGAATTCTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	40656236	40637423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_40637508_40638759_40638907_40640586_40640638_40656144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007759	chr14	+	1446	3	ISM	ENSMUSG00000115483.2	ENSMUST00000228117.2	1466	4	970	-4	970	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTAAAAGCTCTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	43157298	43163465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_43157435_43158114_43158297_43162337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007760	chr14	+	654	1	ISM	ENSMUSG00000115050.2	ENSMUST00000228384.2	1232	3	26161	0	26161	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTGAAGGCTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	43909868	43910522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_43909900_43910500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007761	chr14	+	628	1	FSM	ENSMUSG00000049235.9	ENSMUST00000094051.6	1647	1	1019	0	1019	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAGAAAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	43952207	43952835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_43952200_43952800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007762	chr14	+	267	1	FSM	ENSMUSG00000115160.2	ENSMUST00000226572.2	559	1	241	51	241	-51	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGGGATCTACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	44502741	44503008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_44502700_44503000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007763	chr14	+	377	1	FSM	ENSMUSG00000072594.4	ENSMUST00000100687.4	564	1	133	54	133	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGGGATCTACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	44834254	44834631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_44834300_44834600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007764	chr14	+	396	3	NNC	ENSMUSG00000037759.7	novel	487	3	NA	NA	0	-88	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGACTTCACTGAGAACACA	NA	NA	NA	NA	NA	NA	NA	NA	45226284	45239359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_45226377_45227113_45227265_45239206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007765	chr14	+	488	3	FSM	ENSMUSG00000037759.7	ENST00000557436.1	487	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGATGCGCTTCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	45226284	45239448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_45226377_45227110_45227265_45239206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007766	chr14	+	261	1	NIC	ENSMUSG00000037759.7	novel	3684	2	NA	NA	12903	1	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGATGCGCTTCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	45239187	45239448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_45239200_45239400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007767	chr14	-	153	1	ISM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	35333	0	35259	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGTCTTTGGTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	45520696	45520543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45520500_45520700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007768	chr14	-	182	2	ISM	ENSMUSG00000021831.10	ENST00000395686.8	2224	14	30690	780	30690	-780	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGAATCTCTCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	45525265	45523439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45523546_45525189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007769	chr14	-	197	2	ISM	ENSMUSG00000021831.10	ENST00000395686.8	2224	14	30461	2529	30461	-2529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTTGATGTCCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	45525494	45525188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45525324_45525432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007770	chr14	-	209	2	ISM	ENSMUSG00000021831.10	ENST00000395686.8	2224	14	24100	7861	24100	-7861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGATAGAGTTAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	45531855	45530520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45530635_45531760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007771	chr14	-	183	2	ISM	ENSMUSG00000021831.10	ENST00000395686.8	2224	14	16730	14653	16730	-14653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGTTTTAAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	45539225	45537312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45537420_45539149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007772	chr14	-	206	2	ISM	ENSMUSG00000021831.10	ENST00000395686.8	2224	14	11866	20045	11866	-20045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAACTGCCCCGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45544089	45542704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45542790_45543968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007773	chr14	+	1408	4	ISM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	13602	0	13602	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAATGATCCAGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	45580846	45587162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_45580979_45581103_45581185_45584200_45584273_45586039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007774	chr14	+	1134	1	Genic_Genomic	ENSMUSG00000021832.9	novel	NA	NA	NA	NA	18792	8	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAGCTAGGTATGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	45586036	45587170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_45586000_45587200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007775	chr14	-	380	1	Genic_Genomic	ENSMUSG00000037722.9	novel	NA	NA	NA	NA	8776	5	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCATCAGGTAACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45614165	45613785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_45613800_45614200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007776	chr14	-	480	3	ISM	ENSMUSG00000037722.9	ENSMUST00000227468.2	1490	5	3886	-42	3886	42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTTCATTTCTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45619055	45615568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45615944_45618393_45618456_45619012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007777	chr14	-	375	2	ISM	ENSMUSG00000037722.9	ENSMUST00000226276.2	710	7	-159	6269	9	-6269	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCCCAATTTTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45626409	45622035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45622206_45626204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007778	chr14	-	410	1	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	70914	0	70914	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	45696661	45696251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45696300_45696700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007779	chr14	-	501	2	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	68228	852	68228	-852	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCCCAACAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	45699347	45697103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45697481_45699223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007780	chr14	-	383	4	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	61565	6051	61565	-6051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCCTGAAAATGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	45706010	45702302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45702403_45702540_45702648_45704794_45704920_45705959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007781	chr14	-	408	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	54020	13991	54020	-13991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCAGCCTTGCAGGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45713555	45710242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45710337_45713029_45713133_45713344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007782	chr14	-	422	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	47552	16820	47552	-16820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCGATTCAAGTACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	45720023	45713071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45713133_45713344_45713571_45719888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007783	chr14	-	407	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	25578	17091	25578	-17091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTGGGTTTTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45741997	45713342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45713571_45719888_45720024_45741953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007784	chr14	-	508	3	ISM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	83	45697	83	-45697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGCCCTTCGCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45767492	45741948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_45742188_45766881_45767049_45767390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007785	chr14	+	484	1	Genic_Genomic	ENSMUSG00000082475.3	novel	NA	NA	NA	NA	8807	103	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTAGAGATGTTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	45950799	45951283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_45950800_45951300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007786	chr14	-	576	2	Antisense	novelGene_ENSMUSG00000044285.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCACCTCTAGGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	46322442	46321638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_-_46321787_46322014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007787	chr14	-	552	2	Antisense	novelGene_ENSMUSG00000044285.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTCACGTTCTCGATG	NA	NA	NA	NA	NA	NA	NA	NA	46322446	46321667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_-_46321853_46322079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007788	chr14	+	533	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	96	-15	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCAAGAAGGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	46321680	46322442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_46321869_46322097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007789	chr14	-	488	2	Antisense	novelGene_ENSMUSG00000044285.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAGATCAGCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	46322442	46321720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_-_46321781_46322014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007790	chr14	-	470	2	Antisense	novelGene_ENSMUSG00000044285.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTCCAGCTGCTTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	46322442	46321739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_-_46321923_46322155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007791	chr14	+	451	2	NNC	ENSMUSG00000044285.9	novel	750	2	NA	NA	161	-15	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCAAGAAGGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	46321745	46322442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_46321886_46322131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007792	chr14	+	557	1	FSM	ENSMUSG00000044285.9	ENSMUST00000111388.5	685	1	316	-188	316	0	mono-exon	FALSE	NA	NA	NA	NA	NA	586	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	46321900	46322457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_46321900_46322500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007793	chr14	-	629	1	Genic_Genomic	ENSMUSG00000021835.16	novel	NA	NA	NA	NA	6406	4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTATCTTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	46621601	46620972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_46621000_46621600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007794	chr14	-	1023	3	ISM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	3388	676	3269	-489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGCGGTCCAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	46624738	46621652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_46622170_46623171_46623552_46624612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007795	chr14	-	842	3	ISM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	29	2195	29	-2008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTTGTGCTCTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	46628097	46623171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_46623552_46624612_46624738_46627760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007796	chr14	+	342	3	ISM	ENSMUSG00000037628.11	ENST00000543789.6	429	4	-1	2522	-1	-1435	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCACACAGCAGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	47001978	47004871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_47002037_47002452_47002498_47004632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007797	chr14	+	412	4	FSM	ENSMUSG00000037628.11	ENST00000543789.6	429	4	21	-4	21	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGGGCTGTTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	47002000	47007397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_47002037_47002452_47002498_47004632_47004856_47007289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007798	chr14	+	478	4	ISM	ENSMUSG00000037628.11	ENST00000611205.4	532	5	471	-1	-2	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATCCCAAATAAACGAG	NA	NA	NA	NA	NA	NA	NA	NA	47002450	47008945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_47002498_47004632_47004872_47007289_47007394_47008857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007799	chr14	+	496	5	FSM	ENSMUSG00000037628.11	ENST00000395577.2	491	5	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCCAAATAAACGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	47002451	47008948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007800	chr14	+	670	5	ISM	ENSMUSG00000037628.11	ENSMUST00000067426.6	917	8	4455	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCAGCTAGACATACACT	NA	NA	NA	NA	NA	NA	NA	NA	47002452	47009126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_47002498_47004632_47004856_47006322_47006355_47007292_47007394_47008857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007801	chr14	+	471	4	NIC	ENSMUSG00000037628.11	novel	532	5	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATCCCAAATAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	47002453	47008944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_47002498_47004632_47004872_47007292_47007394_47008857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007802	chr14	+	495	4	NNC	ENSMUSG00000037628.11	novel	491	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATCCCAAATAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	47002453	47008944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_47002498_47004632_47004856_47007252_47007394_47008857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007803	chr14	+	488	4	NNC	ENSMUSG00000037628.11	novel	491	5	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCCAAATAAACGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	47002453	47008948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_47002498_47004632_47004856_47007263_47007394_47008857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007804	chr14	+	327	2	NIC	ENSMUSG00000037628.11	novel	917	8	NA	NA	2177	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAACTGGGCTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	47004629	47007393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_47004856_47007292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007805	chr14	-	989	1	Genic_Genomic	ENSMUSG00000015759.12	novel	NA	NA	NA	NA	11723	2	mono-exon	FALSE	NA	NA	NA	NA	NA	538	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACATTGTCTATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47014010	47013021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_47013000_47014000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007806	chr14	-	1383	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	38	117	38	-117	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGAAATGAAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	47025830	47013140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007807	chr14	-	557	4	FSM	ENSMUSG00000015759.12	ENST00000553660.5	759	4	10	192	10	-47	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGATAAAGAATTTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	47025723	47013790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47025639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007808	chr14	-	1517	1	ISM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	12577	0	12577	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	47047122	47045605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_47045600_47047100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007809	chr14	-	1526	2	ISM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	7924	2224	7924	-2224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTAAACAGATGAACACC	NA	NA	NA	NA	NA	NA	NA	NA	47051775	47047829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_47049281_47051700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007810	chr14	+	1303	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACACTGTCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	47069602	47091650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007811	chr14	-	875	1	FSM	ENSMUSG00000115410.2	ENSMUST00000228355.2	1367	1	495	-3	495	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGGCGCGGCTCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	47122026	47121151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_47121200_47122000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007812	chr14	-	221	1	ISM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	35283	15	35135	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTAATTTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47391587	47391366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_47391400_47391600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007813	chr14	-	299	3	ISM	ENSMUSG00000037580.11	ENST00000543643.6	840	6	30369	63	30369	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGTGGATTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	47396353	47391429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_47391610_47394865_47394951_47396319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007814	chr14	+	165	2	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGGGAAGAGAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	47394865	47403989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr14_+_47394959_47403917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007815	chr14	-	278	4	ISM	ENSMUSG00000037580.11	ENST00000543643.6	840	6	19941	3507	19941	-3507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCGACGTAAGTCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	47406781	47394873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_47394951_47396319_47396352_47403932_47403989_47406668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007816	chr14	-	347	3	ISM	ENSMUSG00000037580.11	ENST00000543643.6	840	6	134	12565	134	-12565	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATGAGGTCTCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	47426588	47403931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_47403989_47406668_47406779_47426408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007817	chr14	+	4384	2	ISM	ENSMUSG00000021840.18	ENSMUST00000164235.3	4531	3	1864	109	1864	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTCTTTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	47547870	47560552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_47548571_47556868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007818	chr14	+	3552	1	Genic_Genomic	ENSMUSG00000021840.18	novel	NA	NA	NA	NA	11105	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTTGCATGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	47557111	47560663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_47557100_47560700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007819	chr14	+	380	3	ISM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	0	5890	0	-5524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCTGGCCCAACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	47611269	47617727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_47611410_47616979_47617002_47617509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007820	chr14	+	382	2	NIC	ENSMUSG00000050335.18	novel	1298	6	NA	NA	1	-5526	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATCCTGGCCCAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	47611270	47617725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_47611437_47617509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007821	chr14	+	300	2	NIC	ENSMUSG00000050335.18	novel	1419	6	NA	NA	21	-5561	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTAGTGCCTACCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	47611290	47617690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_47611410_47617509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007822	chr14	+	1289	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	14	-5	14	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	2682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGATTTGGTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	47611359	47623550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007823	chr14	+	222	3	NNC	ENSMUSG00000050335.18	novel	1419	6	NA	NA	7689	-235	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTCAACGATGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	47619109	47623016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_47619142_47622069_47622225_47622981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007824	chr14	+	656	1	Genic_Genomic	ENSMUSG00000050335.18	novel	NA	NA	NA	NA	11554	13	mono-exon	FALSE	NA	NA	NA	NA	NA	866	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGGCGCCAGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	47622974	47623630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_47623000_47623600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007825	chr14	+	685	2	ISM	ENSMUSG00000037536.15	ENSMUST00000165714.2	3159	4	18879	2180	18879	-2125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGCTGCGAGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	47763687	47767232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_47763772_47766631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007826	chr14	+	646	1	ISM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	58752	4	23961	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	47768769	47769415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_47768800_47769400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007827	chr14	-	1972	1	ISM	ENSMUSG00000037526.8	ENSMUST00000226299.2	3729	11	27785	0	25570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	47780321	47778349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_47778300_47780300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007828	chr14	+	1368	1	FSM	ENSMUSG00000036339.19	ENSMUST00000226400.2	2281	1	915	-2	830	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAAGTTTTCCTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	48684668	48686036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_48684700_48686000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007829	chr14	+	398	1	Genic_Genomic	ENSMUSG00000115669.2	novel	NA	NA	NA	NA	5917	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACACCCCAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	48886834	48887232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_48886800_48887200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007830	chr14	-	1858	5	FSM	ENSMUSG00000021848.17	ENST00000672125.1	1859	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAATTATATTAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	48904891	48895165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_48896310_48896672_48896784_48898755_48898908_48899900_48900117_48904656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007831	chr14	-	203	1	ISM	ENSMUSG00000021848.17	ENSMUST00000226501.2	2592	6	8318	1318	3675	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGGGGGCATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	48896654	48896451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_48896500_48896700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007832	chr14	-	326	2	ISM	ENSMUSG00000021848.17	ENST00000554559.5	724	4	4945	147	287	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGCTCCAGTGTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	48900042	48896599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_48896784_48899900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007833	chr14	-	188	3	ISM	ENSMUSG00000021848.17	ENST00000554559.5	724	4	32	3621	15	-3621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCAGGCGAATCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	48904955	48900073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_48900117_48904656_48904731_48904884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007834	chr14	-	594	1	ISM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	52306	9664	52049	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAATTTTCAGTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	49251804	49251210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_49251200_49251800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007835	chr14	-	1116	4	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	12898	0	12874	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATAGTTCTGTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	51010078	51002871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007836	chr14	-	1162	1	ISM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	8884	0	8884	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGAGCTGCTGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	51014068	51012906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_51012900_51014100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007837	chr14	-	440	1	Genic_Genomic	ENSMUSG00000006289.15	novel	NA	NA	NA	NA	10657	2	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACTTACAGAGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	51151488	51151048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_51151000_51151500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007838	chr14	-	577	3	ISM	ENSMUSG00000006289.15	ENSMUST00000162177.8	1219	11	8275	-193	8275	193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGCTGACCACTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	51153870	51152949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_51153356_51153608_51153708_51153798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007839	chr14	-	443	4	ISM	ENSMUSG00000006289.15	ENSMUST00000162177.8	1219	11	4638	1768	4638	-1768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGATGTGAAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	51157507	51154910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_51154961_51155292_51155389_51157072_51157249_51157386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007840	chr14	-	442	3	ISM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	75	6031	75	-3939	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCCAGGTACTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	51162275	51157081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_51157249_51157386_51157507_51162120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007841	chr14	+	500	3	ISM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	243	781	243	-781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTAATGACATTCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	51162667	51163815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_51162782_51162973_51163162_51163617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007842	chr14	+	789	3	ISM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	548	277	548	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTTTGCTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	51162972	51164319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_51163162_51163617_51163811_51163912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007843	chr14	-	945	1	Genic_Genomic	ENSMUSG00000035953.15	novel	NA	NA	NA	NA	3801	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCGTTAGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	51164468	51163523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_51163500_51164500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007844	chr14	+	436	1	Genic_Genomic	ENSMUSG00000035960.15	novel	NA	NA	NA	NA	1737	1	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTTTCTTTGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	51164161	51164597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_51164200_51164600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007845	chr14	-	1062	3	ISM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	1753	-94	1753	94	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTGGATTGTCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	51166516	51164577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_51165495_51166277_51166369_51166462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007846	chr14	-	371	1	ISM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	3265	1146	3228	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCCACTTAACAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	51165041	51164670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_51164700_51165000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007847	chr14	-	500	3	ISM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	21	2369	14	-2369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAGACCTAAGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	51168292	51167040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_51167148_51167590_51167782_51168090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007848	chr14	+	2134	4	ISM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	5995	307	5791	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATGGAAGATAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	51187753	51190562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_51187819_51187999_51188176_51188288_51188480_51188860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007849	chr14	+	1763	1	NIC	ENSMUSG00000115338.3	novel	1306	8	NA	NA	7149	5	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAAGGATCAGGCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51189111	51190874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_51189100_51190900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007850	chr14	+	133	2	FSM	ENSMUSG00000021876.16	ENSMUST00000022428.13	1518	2	120	1265	120	-1265	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTTGTACAGCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	51328653	51342339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_51328711_51342263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007851	chr14	+	1098	2	FSM	ENSMUSG00000072115.12	ENSMUST00000069011.9	1094	2	0	-4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCAGTCTGGAAGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	51333456	51339466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_51333931_51338842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007852	chr14	+	568	2	FSM	ENSMUSG00000072115.12	ENST00000553909.1	562	2	-5	-1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCAGCTGTTACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	51338844	51342729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_51338947_51342263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007853	chr14	+	549	2	NNC	ENSMUSG00000072115.12	novel	562	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGCAGCTGTTACAGC	NA	NA	NA	NA	NA	NA	NA	NA	51338851	51342728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_51338947_51342274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007854	chr14	+	470	1	NIC	ENSMUSG00000021876.16	novel	1518	2	NA	NA	8443	-876	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGCAGCTGTTACAGC	NA	NA	NA	NA	NA	NA	NA	NA	51342258	51342728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_51342300_51342700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007855	chr14	+	125	1	ISM	ENSMUSG00000021876.16	ENSMUST00000022428.13	1518	2	14946	0	9664	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCGGGATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	51343479	51343604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_51343500_51343600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007856	chr14	+	425	2	ISM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	6524	3	6420	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGGTGGATGTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	52128822	52129322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_52129009_52129083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007857	chr14	-	464	1	Genic_Genomic	ENSMUSG00000004558.16	novel	NA	NA	NA	NA	5064	2	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTCTGAATGCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	52143189	52142725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_52142700_52143200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007858	chr14	-	1033	3	ISM	ENSMUSG00000004558.16	ENST00000554104.5	1816	14	4227	-3	4227	3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTAATCCGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	52144026	52142735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52143167_52143218_52143764_52143969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007859	chr14	-	708	5	ISM	ENSMUSG00000004558.16	ENST00000554104.5	1816	14	3510	494	3510	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAGGAGAGAGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52144743	52143232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007860	chr14	-	130	2	ISM	ENSMUSG00000004558.16	ENST00000554104.5	1816	14	415	4776	415	-4282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGGCTTCAGGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	52147838	52147514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52147578_52147771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007861	chr14	+	480	2	ISM	ENSMUSG00000004562.17	ENSMUST00000182061.8	4756	23	4612	15492	4612	-15491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGAAACTCCCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	52226999	52227588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_52227396_52227504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007862	chr14	-	2785	4	FSM	ENSMUSG00000049295.18	ENSMUST00000228580.2	2812	4	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	52258131	52243538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52257979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007863	chr14	+	928	5	ISM	ENSMUSG00000072571.4	ENST00000556585.2	1218	7	953	0	899	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGCGCTGTGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52255274	52257232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_52255319_52255410_52255468_52255998_52256116_52256195_52256336_52256662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007864	chr14	-	1059	1	ISM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	29593	0	9918	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTGGTATATACATCA	NA	NA	NA	NA	NA	NA	NA	NA	52311892	52310833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52310800_52311900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007865	chr14	-	1323	4	ISM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	26402	-500	6786	140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACACCCTGCTGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52315024	52311755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007866	chr14	-	1001	3	ISM	ENSMUSG00000060373.16	ENST00000556142.5	1438	6	6825	0	6786	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTTTTTTTTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	52315024	52311895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52312618_52313069_52313184_52314859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007867	chr14	-	920	6	ISM	ENSMUSG00000060373.16	ENST00000556628.5	1039	7	13744	-2	56	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCTTGTTATGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	52321754	52312239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52321696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007868	chr14	-	809	4	ISM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	26442	330	6792	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCTTGTTATGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	52315018	52312239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007869	chr14	-	198	1	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	9190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGCCTTACCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	52312620	52312422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_52312400_52312600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007870	chr14	-	325	3	ISM	ENSMUSG00000060373.16	ENST00000556142.5	1438	6	2487	2965	2448	-2308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTGTTTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	52319362	52314860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52315021_52318716_52318765_52319245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007871	chr14	-	415	3	ISM	ENSMUSG00000060373.16	ENST00000556142.5	1438	6	33	6814	-6	-6157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTTCTCATATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	52321816	52318709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52318765_52319245_52319361_52321571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007872	chr14	-	445	3	ISM	ENSMUSG00000060373.16	ENST00000420743.6	1430	10	500	9180	-4	-9050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCAGAATGATTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	52335502	52321602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52321849_52334778_52334947_52335471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007873	chr14	-	305	3	ISM	ENSMUSG00000060373.16	ENST00000420743.6	1430	10	54	22356	54	-22226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGTGTGAGGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	52335948	52334778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52334947_52335471_52335498_52335837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007874	chr14	-	743	1	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	36260	0	36260	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	NA	NA	NA	NA	NA	NA	NA	52398613	52397870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52397900_52398600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007875	chr14	-	805	2	ISM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	34649	685	34649	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCCTTGGGCTCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	52400224	52398555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52399280_52400143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007876	chr14	-	1644	3	ISM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	-200	34557	-200	-34229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGAGTCCTGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	52475229	52470164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52470388_52472580_52472959_52474186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007877	chr14	-	1322	1	ISM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	16465	0	16218	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGTCATTTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	52500537	52499215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52499200_52500500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007878	chr14	-	1474	3	ISM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	13273	737	13026	-725	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACATATTTATCCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	52503729	52499952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52501275_52502155_52502225_52503646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007879	chr14	+	1148	3	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	12922	2368	12922	-2368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTGGCCCACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	52529524	52531490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_52529676_52529976_52530141_52530657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007880	chr14	-	150	1	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	10138	0	10138	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCTTTCCACTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	52532447	52532297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52532300_52532400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007881	chr14	+	934	1	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	16322	0	16322	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTCTAGTCTGGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	52532924	52533858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_52532900_52533900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007882	chr14	-	152	2	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	8551	1256	8551	-1256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACAATGTGCAGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	52534034	52533553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52533644_52533972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007883	chr14	-	142	2	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	8355	1709	8355	-1709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCCTGGACTGCGATG	NA	NA	NA	NA	NA	NA	NA	NA	52534230	52534006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52534039_52534120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007884	chr14	-	145	2	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	7552	2078	7552	-2078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGAAATTATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	52535033	52534375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52534415_52534927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007885	chr14	-	248	2	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	7108	2722	7108	-2722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTATGGGACATTAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	52535477	52535019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52535116_52535325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007886	chr14	-	160	2	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	6409	3165	6409	-3165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTTCACTATGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	52536176	52535462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52535543_52536096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007887	chr14	-	182	2	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	5279	3942	5279	-3942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAGCCAAGGAACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	52537306	52536239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52536273_52537157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007888	chr14	-	169	2	ISM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	135	5498	135	-5498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTACCTCTAGCGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	52542450	52537795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_52537859_52542344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007889	chr14	+	350	1	FSM	ENSMUSG00000094974.2	ENSMUST00000100614.6	438	1	142	-54	142	54	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGGATCCTATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	53140391	53140741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_53140400_53140700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007890	chr14	+	336	1	FSM	ENSMUSG00000096681.2	ENSMUST00000168472.3	438	1	155	-53	155	53	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATAGGATCCTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	53451341	53451677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_53451300_53451700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007891	chr14	+	410	2	FSM	ENSMUSG00000093966.3	ENSMUST00000103655.3	411	2	3	-2	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTCCCAGCAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53836287	53836869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_53836417_53836588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007892	chr14	-	236	1	Genic_Genomic	ENSMUSG00000022174.9	novel	NA	NA	NA	NA	18129	1	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTCCTTCATGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54473170	54472934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_54472900_54473200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007893	chr14	-	360	2	ISM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	11235	46	10973	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTTACTTTCCATATT	NA	NA	NA	NA	NA	NA	NA	NA	54480326	54472981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54473171_54480155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007894	chr14	-	368	2	FSM	ENSMUSG00000022174.9	ENSMUST00000128231.2	3491	2	86	3037	14	39	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCCATCCCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	54491285	54480154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_54480326_54491088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007895	chr14	+	1811	5	ISM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	3461	371	3461	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATCGCTGAGAGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	54500149	54506250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007896	chr14	+	1069	1	ISM	ENSMUSG00000040997.15	ENSMUST00000239403.2	2406	7	8869	0	8869	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTGTTTAATATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	54505557	54506626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54505600_54506600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007897	chr14	+	523	4	ISM	ENSMUSG00000000959.8	ENST00000412791.5	839	6	314	536	314	-536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCGATTGGACAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	54604479	54605414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54604568_54604722_54604888_54605044_54605150_54605249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007898	chr14	+	612	4	ISM	ENSMUSG00000000959.8	ENST00000412791.5	839	6	554	0	554	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCCACACAGACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	54604719	54605950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54604888_54605044_54605150_54605249_54605413_54605774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007899	chr14	+	419	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGGCTTTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	54664365	54667214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007900	chr14	+	210	2	ISM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	20	2511	20	-2511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTTGATGTCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	54664406	54664695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54664549_54664627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007901	chr14	+	168	1	ISM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	2673	7	2652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	54667038	54667206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54667000_54667200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007902	chr14	+	1538	5	ISM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	7052	-45	7031	45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACAGAGAGTCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	54676120	54678767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007903	chr14	+	1333	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	1449	2716	1449	-2716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTGGAGGGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	54703042	54706238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54703167_54704916_54705108_54705220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007904	chr14	+	2230	3	ISM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	3625	1153	3625	-1153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCTGAGGAATAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	54705218	54707801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_54706239_54706492_54706623_54706721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007905	chr14	+	1091	1	Genic_Genomic	ENSMUSG00000022175.10	novel	NA	NA	NA	NA	6275	5	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCCTTTGTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	54707868	54708959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_54707900_54709000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007906	chr14	-	166	1	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	9402	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCAAAACCTTGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	54745406	54745240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_54745200_54745400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007907	chr14	-	304	3	ISM	ENSMUSG00000023110.13	ENST00000553897.5	1830	16	6420	1755	6373	-1755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTCACGCGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54748435	54747000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54747095_54747290_54747401_54748335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007908	chr14	-	213	2	ISM	ENSMUSG00000023110.13	ENST00000553897.5	1830	16	5272	3712	5225	-3712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGTTGGCTTCCGCGG	NA	NA	NA	NA	NA	NA	NA	NA	54749583	54748957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54749037_54749449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007909	chr14	-	205	2	ISM	ENSMUSG00000023110.13	ENST00000553897.5	1830	16	2006	6984	1959	-6984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCCTTTTGCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	54752849	54752229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54752345_54752759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007910	chr14	-	1050	6	ISM	ENSMUSG00000022177.10	ENST00000342454.12	908	7	237	-286	237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54787259	54779241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54787125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007911	chr14	-	475	1	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	7780	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	54779716	54779241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_54779200_54779700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007912	chr14	-	704	6	ISM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	4559	606	237	-320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCAGGTAGGAACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	54787259	54779847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007913	chr14	-	312	3	ISM	ENSMUSG00000022177.10	ENST00000347758.6	665	5	233	338	233	-338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGGAAATGCATCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54787263	54779865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54779909_54781235_54781367_54787125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007914	chr14	-	351	3	ISM	ENSMUSG00000022177.10	ENST00000347758.6	665	5	4	1762	4	-1762	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAATGCCCAGTACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	54787492	54781289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54781367_54787125_54787258_54787350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007915	chr14	-	638	5	ISM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	4331	2429	9	-2143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCCAGGTGTGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	54787487	54781670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007916	chr14	-	1706	3	ISM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	7262	0	7262	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGAGTGTATTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	54807753	54804928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54806514_54806932_54807002_54807701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007917	chr14	-	982	5	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	14518	32	14518	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAGGTGGAAAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	54828890	54821772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007918	chr14	-	1197	4	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	10104	1386	10104	-1386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAGGAGCTGAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	54833304	54823126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54823213_54823392_54823455_54828578_54828890_54832566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007919	chr14	-	1126	3	ISM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	1	6907	1	-6907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCCATGCAGGATCCG	NA	NA	NA	NA	NA	NA	NA	NA	54843407	54828647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54828890_54832566_54833303_54843259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007920	chr14	-	366	1	NIC	ENSMUSG00000022193.8	novel	899	3	NA	NA	3513	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGTCCACAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	54851941	54851575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_54851600_54851900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007921	chr14	-	627	2	ISM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	1199	45	1174	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGGGTCTCCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	54854280	54851620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54851939_54853971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007922	chr14	-	909	3	FSM	ENSMUSG00000022193.8	ENST00000493471.2	884	3	-24	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGCATCTCTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	54855478	54851633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_54851939_54853902_54854279_54855250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007923	chr14	+	486	2	Antisense	novelGene_ENSMUSG00000076128.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCACCGTCTGGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	54851747	54854202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_+_54851931_54853899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007924	chr14	-	311	1	Genic_Genomic	ENSMUSG00000059674.8	novel	NA	NA	NA	NA	9797	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGCCCGCTTCTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	54868997	54868686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_54868700_54869000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007925	chr14	-	644	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	9373	0	9373	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGCCCGCTTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	54869421	54868687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54868991_54869080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007926	chr14	-	357	2	NNC	ENSMUSG00000059674.8	novel	3372	13	NA	NA	9404	-260	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATCGGCTTCTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	54869390	54868947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_54868991_54869076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007927	chr14	-	707	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	7763	1040	7763	-1040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAAGGCCGGGGCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	54871031	54869727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54870070_54870503_54870753_54870915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007928	chr14	-	404	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	7565	1896	7565	-1896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGCTCAGCTATCGC	NA	NA	NA	NA	NA	NA	NA	NA	54871229	54870583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54870753_54870915_54871028_54871106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007929	chr14	-	330	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	4909	2228	4909	-2228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTAGCCTCTGCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	54873885	54870915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54871028_54871106_54871229_54873789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007930	chr14	-	497	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	3761	2437	3761	-2437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCCCCTGGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	54875033	54871124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54871229_54873789_54873927_54874777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007931	chr14	+	345	2	Antisense	novelGene_ENSMUSG00000059674.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGAGGAGGGGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	54873835	54875030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_+_54873923_54874772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007932	chr14	-	511	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	3140	5176	3140	-5176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGTACAGCAGTGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	54875654	54873863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54873927_54874777_54875032_54875460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007933	chr14	-	405	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2844	6294	2844	-6294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACACACTCATCGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	54875950	54874981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54875032_54875460_54875649_54875783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007934	chr14	-	428	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2649	6822	2649	-6822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCACAGACTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	54876145	54875509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54875649_54875783_54875952_54876024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007935	chr14	-	507	3	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	2170	7174	2170	-7174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGGGCTGTCAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	54876624	54875861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54875952_54876024_54876145_54876327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007936	chr14	-	583	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	1707	7639	1707	-7639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACCCCAGTTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	54877087	54876326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54876623_54876800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007937	chr14	-	426	2	ISM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	9	8113	9	-8113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATCAACCCTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	54878785	54876800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54877119_54878677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007938	chr14	+	1845	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTGATTCACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	54923673	54928201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_54924578_54927260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007939	chr14	-	551	1	ISM	ENSMUSG00000022180.8	ENSMUST00000022787.8	4084	11	59169	2	14906	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGATGGAGTTAATAATC	NA	NA	NA	NA	NA	NA	NA	NA	54960218	54959667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_54959700_54960200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007940	chr14	-	3014	6	FSM	ENSMUSG00000022180.8	ENST00000469263.5	3304	6	291	-1	291	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGAGTGATGGAGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	55018976	54959671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_54961709_54973180_54973335_54974996_54975123_54995895_54996048_54996997_54997203_55018636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007941	chr14	-	1391	3	FSM	ENSMUSG00000057156.11	ENST00000673724.1	1404	3	14	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAATTGCTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	55101454	55094086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_55094918_55095235_55095739_55101397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007942	chr14	-	1001	1	ISM	ENSMUSG00000057156.11	ENSMUST00000081162.6	5609	2	2860	3894	2860	1	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAATTGCTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	55095087	55094086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55094100_55095100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007943	chr14	-	1080	2	FSM	ENSMUSG00000057156.11	ENST00000561013.2	1769	2	2	687	2	-687	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCAGCTGGCCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	55108454	55094774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_55095739_55108338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007944	chr14	+	163	2	ISM	ENSMUSG00000022194.16	ENSMUST00000139985.8	903	5	2416	138	2400	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATCTACAGGTCAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	55134474	55134718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55134497_55134577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007945	chr14	+	166	1	Genic_Genomic	ENSMUSG00000022194.16_ENSMUSG00000092232.2	novel	NA	NA	NA	NA	3400	14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATACTGTGGAAGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55135474	55135640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_55135500_55135600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007946	chr14	-	544	1	ISM	ENSMUSG00000022199.13	ENSMUST00000050772.10	2294	9	5849	13	5815	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGGACTTCCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	55144740	55144196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55144200_55144700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007947	chr14	-	564	3	ISM	ENSMUSG00000022199.13	ENSMUST00000228495.3	2340	10	537	2935	537	-2935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTACCTGATGCGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	55150018	55147142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55147283_55149505_55149610_55149698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007948	chr14	+	1293	2	FSM	ENSMUSG00000040770.6	ENST00000329715.2	1291	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTATTTGTCTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55170125	55173296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_55170683_55172560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007949	chr14	+	1116	2	NNC	ENSMUSG00000040770.6	novel	1291	2	NA	NA	57	-87	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTAATTGCCTTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	55170208	55173207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_55170687_55172569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007950	chr14	+	537	3	ISM	ENSMUSG00000040759.10	ENST00000339180.9	789	5	98	538	65	-538	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCTCACTTCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	55174018	55175833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55174241_55175351_55175514_55175680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007951	chr14	+	273	2	NIC	ENSMUSG00000040759.10	novel	789	5	NA	NA	1397	-572	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTATCTGCTTCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	55175350	55175799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_55175505_55175680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007952	chr14	+	312	3	ISM	ENSMUSG00000040759.10	ENST00000339180.9	789	5	1529	236	1496	-236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTCCTACAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	55175449	55176135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55175514_55175680_55175832_55176038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007953	chr14	+	277	3	NNC	ENSMUSG00000040759.10	novel	789	5	NA	NA	1524	-238	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCATTCCTACAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	55175477	55176133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_55175514_55175680_55175827_55176038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007954	chr14	+	272	3	ISM	ENSMUSG00000040759.10	ENST00000339180.9	789	5	1796	-1	1763	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCCCAGTACCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	55175716	55176372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55175832_55176038_55176132_55176308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007955	chr14	+	211	3	NNC	ENSMUSG00000040759.10	novel	789	5	NA	NA	1819	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCCCAGTACCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	55175772	55176372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_55175827_55176038_55176132_55176308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007956	chr14	+	535	4	ISM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	6583	-1	6583	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTTTGCCATACATT	NA	NA	NA	NA	NA	NA	NA	NA	55259493	55261595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55259664_55260506_55260664_55260792_55260851_55261445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007957	chr14	+	1415	3	FSM	ENSMUSG00000045691.15	ENST00000404535.3	1424	3	13	-4	13	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTGAGACCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	55332408	55335526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_55332573_55332902_55333464_55334836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007958	chr14	-	1204	1	ISM	ENSMUSG00000022208.13	ENSMUST00000022819.13	4489	6	8902	4	7519	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGACTGTCATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55345490	55344286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55344300_55345500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007959	chr14	-	2428	4	ISM	ENSMUSG00000022208.13	ENSMUST00000124493.2	3200	5	1517	-28	1517	28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTTGGGGGGAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	55351492	55344705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55345853_55346742_55347276_55347533_55347653_55350863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007960	chr14	-	1394	3	ISM	ENSMUSG00000022208.13	ENST00000397118.7	4244	7	735	6634	-279	-6187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCCCGTCGAGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	55353288	55350920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55351636_55352352_55352903_55353159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007961	chr14	+	261	2	ISM	ENSMUSG00000022210.8	ENSMUST00000226168.2	828	5	77	7373	1	-7373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAGGCAGAATATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	55716408	55717661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55716491_55717482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007962	chr14	+	596	4	ISM	ENSMUSG00000022210.8	ENST00000397071.5	681	5	1078	-1	1073	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGAAGTGTGGTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	55717480	55727533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55717661_55723573_55723676_55725616_55725673_55727275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007963	chr14	+	162	2	ISM	ENSMUSG00000022210.8	ENSMUST00000226168.2	828	5	1280	1348	1204	-1348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACACAGCAGTAGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	55717611	55723686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55717661_55723573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007964	chr14	+	468	4	ISM	ENSMUSG00000022210.8	ENST00000558263.5	728	6	7165	0	7165	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAAGTGTGGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55723572	55727532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55723676_55724716_55724769_55725616_55725673_55727275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007965	chr14	+	310	2	NNC	ENSMUSG00000022210.8	novel	681	5	NA	NA	9207	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAAGTGTGGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55725614	55727532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_55725673_55727280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007966	chr14	+	259	1	NIC	ENSMUSG00000022210.8	novel	1392	8	NA	NA	10866	0	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAAGTGTGGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55727273	55727532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_55727300_55727500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007967	chr14	+	820	4	ISM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	-59	5760	-59	-4738	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACCTATCTAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	55777786	55781521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007968	chr14	+	584	3	ISM	ENSMUSG00000040618.8	ENST00000561286.5	1933	9	2	4784	2	-4738	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACCTATCTAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	55777864	55781521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55778059_55781045_55781231_55781316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007969	chr14	+	839	3	ISM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	2	5101	2	-5101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGCAACTGGATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	55777864	55781158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55778345_55779862_55780109_55781045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007970	chr14	+	780	4	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	48	4266	48	-4220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGCCTGGTGAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	55779905	55782039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55780109_55781045_55781231_55781316_55781521_55781851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007971	chr14	+	743	4	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	1187	3799	1187	-3753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGCCCTTTTCCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	55781044	55782506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55781231_55781316_55781521_55781851_55782040_55782341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007972	chr14	+	777	4	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	1458	3421	1458	-3375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGGGTGAGGTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55781315	55782884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55781521_55781851_55782040_55782341_55782505_55782663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007973	chr14	+	698	4	ISM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	2005	1013	2005	-967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAGCATGTGCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55781862	55785292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55782040_55782341_55782505_55782663_55782883_55785153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007974	chr14	+	1134	5	ISM	ENSMUSG00000040618.8	ENST00000561286.5	1933	9	4590	-85	2595	85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCCTGTGTCTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	55782452	55786390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007975	chr14	+	550	1	NIC	ENSMUSG00000040618.8	novel	3400	10	NA	NA	5901	3	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGTTGGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55785758	55786308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_55785800_55786300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007976	chr14	+	593	1	ISM	ENSMUSG00000040618.8	ENSMUST00000226519.2	4625	10	9160	1224	7025	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTAAAGTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	55786882	55787475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55786900_55787500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007977	chr14	+	701	1	Genic_Genomic	ENSMUSG00000040618.8	novel	NA	NA	NA	NA	8155	14	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTCAAATAAAATGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	55788012	55788713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_55788000_55788700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007978	chr14	+	656	3	ISM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	53	6584	-7	-6405	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCAGATGTTACACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	55798480	55800937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55798900_55800348_55800477_55800828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007979	chr14	+	1287	6	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	4459	23	4423	-23	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAACTATGTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55802946	55807319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007980	chr14	+	589	1	ISM	ENSMUSG00000022214.16	ENSMUST00000117236.8	2538	15	9470	1	8409	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	55806932	55807521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55806900_55807500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007981	chr14	+	283	3	ISM	ENSMUSG00000022216.18	ENSMUST00000172738.2	681	10	-147	1547	68	-1547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGGGGGCTCCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	55815884	55817291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55816071_55817051_55817085_55817227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007982	chr14	+	263	3	NNC	ENSMUSG00000022216.18	novel	681	10	NA	NA	-24	-1340	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCTGGGAGACCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	55816007	55817498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_55816097_55817227_55817291_55817387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007983	chr14	+	199	3	ISM	ENSMUSG00000022216.18	ENSMUST00000172738.2	681	10	1018	1350	1018	-1350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAGGAGGCAAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	55817049	55817488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55817085_55817227_55817291_55817387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007984	chr14	+	259	3	ISM	ENSMUSG00000022216.18	ENSMUST00000172738.2	681	10	1354	952	1354	-952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTTCCGCCTTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	55817385	55817886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55817499_55817570_55817617_55817786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007985	chr14	-	168	2	Antisense	novelGene_ENSMUSG00000022216.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTACGGCTGGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	55817618	55817385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_-_55817504_55817568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007986	chr14	+	199	3	ISM	ENSMUSG00000022216.18	ENSMUST00000089619.13	711	11	1537	734	1537	-734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTGGCTGTCCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	55817568	55818104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55817617_55817786_55817885_55818051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007987	chr14	+	191	3	ISM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	2016	715	1801	-568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGCCTCATCACAACAC	NA	NA	NA	NA	NA	NA	NA	NA	55817832	55818270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55817885_55818051_55818121_55818200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007988	chr14	+	194	3	ISM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	2234	555	2019	-408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGAGGCCCAGGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	55818050	55818430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55818121_55818200_55818269_55818374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007989	chr14	+	197	3	ISM	ENSMUSG00000022216.18	ENSMUST00000172738.2	681	10	2174	251	2174	-251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTATGTGAGGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55818205	55818587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55818269_55818374_55818430_55818508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007990	chr14	+	283	2	ISM	ENSMUSG00000022216.18	ENSMUST00000172738.2	681	10	2476	-114	2476	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCCAAACACAATAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	55818507	55818952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55818596_55818757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007991	chr14	+	212	1	ISM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	2957	0	2742	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	55818773	55818985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55818800_55819000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007992	chr14	+	883	5	ISM	ENSMUSG00000002325.16	ENST00000396864.8	1151	7	14	1203	14	-1203	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATGCACCAGAGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	55842520	55845218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55842690_55843177_55843362_55843549_55843691_55843774_55843896_55844950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007993	chr14	+	902	5	ISM	ENSMUSG00000002325.16	ENST00000396864.8	1151	7	683	174	683	-174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGCAGGTTAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	55843189	55846247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55843362_55843549_55843691_55843774_55843896_55844950_55845313_55846141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007994	chr14	-	152	2	ISM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	9460	561	9460	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAATGATAAAGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	55863681	55863417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55863499_55863610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007995	chr14	-	154	2	ISM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	7473	2546	7473	-2546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTCCATTCAGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	55865668	55865402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55865451_55865562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007996	chr14	-	158	2	ISM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	6507	3541	6507	-3541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAGTAGAAAGGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	55866634	55866397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55866445_55866523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007997	chr14	-	137	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	8423	184	8423	-184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTAGAGGCATCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	55866929	55866716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55866775_55866850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007998	chr14	-	180	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	7826	704	7826	-704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGAGGGGGATGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	55867526	55867236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55867325_55867434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000007999	chr14	-	232	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	6353	2075	6353	-2075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTAGGTAGTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	55868999	55868607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55868729_55868888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008000	chr14	-	158	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	5785	2385	5785	-2385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGGCCAGTTTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	55869567	55868917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55868998_55869489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008001	chr14	-	125	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	4864	3224	4864	-3224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGACTCTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	55870488	55869756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55869811_55870417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008002	chr14	-	169	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	4476	3967	4476	-3967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCTGAAGATCAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	55870876	55870499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55870583_55870790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008003	chr14	-	168	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	4117	4430	4117	-4430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGCCCGGGGTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	55871235	55870962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55871064_55871168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008004	chr14	-	128	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	3819	4636	3819	-4636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGACAGACGGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55871533	55871168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55871235_55871471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008005	chr14	-	240	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	3486	5009	3486	-5009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGGAGTGCTCTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	55871866	55871541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55871652_55871736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008006	chr14	-	145	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	2846	5234	2846	-5234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATAGTTCCCATAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	55872506	55871766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55871867_55872461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008007	chr14	-	126	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	2681	5928	2681	-5928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGGAGCACCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	55872671	55872460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55872504_55872588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008008	chr14	-	170	2	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	2253	6317	2253	-6317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGCTGGCAACAGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	55873099	55872849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55872907_55872986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008009	chr14	-	1017	3	ISM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	2768	4	2768	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCCTGTCGTTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55877940	55873425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55874070_55875315_55875590_55877841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008010	chr14	-	537	1	ISM	ENSMUSG00000115232.2	ENSMUST00000156420.9	3275	23	1301	6982	1301	-6982	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTTGAACTTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	55874051	55873514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55873500_55874100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008011	chr14	-	1043	3	ISM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	1764	1826	1675	-1826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTTGGTGGCTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	55879033	55875342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55875590_55877841_55878028_55878423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008012	chr14	-	1180	3	ISM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	291	4409	202	-4409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGTGTCGAGCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	55880506	55877925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55878028_55878423_55879046_55880050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008013	chr14	+	542	2	Antisense	novelGene_ENSMUSG00000002320.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATCCTTAAGGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55878835	55880388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_+_55879048_55880058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008014	chr14	-	974	3	ISM	ENSMUSG00000002320.16	ENSMUST00000122358.8	2517	6	0	5437	0	-5342	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCGGTGCGGGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	55881263	55878858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55879046_55880050_55880413_55880838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008015	chr14	+	501	2	FSM	ENSMUSG00000007591.16	ENST00000428351.2	477	2	-9	-15	-9	15	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGGGGAAATCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55887751	55889944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_55888031_55889722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008016	chr14	-	588	1	Genic_Genomic	ENSMUSG00000002329.8_ENSMUSG00000115600.2	novel	NA	NA	NA	NA	-257	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTAAGCTGTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	55895922	55895334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_55895300_55895900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008017	chr14	-	813	4	ISM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	460	638	460	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACTAAAAGTTAATACTG	NA	NA	NA	NA	NA	NA	NA	NA	55897505	55895973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008018	chr14	-	168	1	Genic_Genomic	ENSMUSG00000010376.16	novel	NA	NA	NA	NA	9444	1	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTCTTTCTTCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	55899886	55899718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_55899700_55899900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008019	chr14	-	301	3	ISM	ENSMUSG00000010376.16	ENSMUST00000163750.8	514	5	8012	193	8012	-193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACCAGAGCCACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	55901318	55899914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55900083_55900871_55900955_55901268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008020	chr14	-	276	3	ISM	ENSMUSG00000010376.16	ENSMUST00000163750.8	514	5	-79	1163	-79	-1163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAAGCAAATGTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	55909409	55900884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55900955_55901268_55901317_55909251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008021	chr14	+	463	4	ISM	ENSMUSG00000002326.7	ENST00000456667.7	951	8	234	1388	234	-1388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAAGGCCATATCATCT	NA	NA	NA	NA	NA	NA	NA	NA	55910404	55914469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55910527_55913015_55913190_55914211_55914294_55914384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008022	chr14	+	481	5	ISM	ENSMUSG00000002326.7	ENST00000456667.7	951	8	2910	390	2910	-390	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTGTGGCTGAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	55913080	55915467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008023	chr14	+	570	5	ISM	ENSMUSG00000002326.7	ENST00000456667.7	951	8	4040	0	4040	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCCCAGTAGACCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55914210	55915857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008024	chr14	-	503	1	Genic_Genomic	ENSMUSG00000007589.10	novel	NA	NA	NA	NA	3382	5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAGTTGAAAAAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	55915820	55915317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_55915300_55915800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008025	chr14	-	528	2	ISM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	2212	1111	2137	-1111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTATGCCATCCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	55917065	55916433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55916867_55916970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008026	chr14	-	536	2	ISM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	1117	2148	1042	-2148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGTCTCTTCTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	55918160	55917470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55917914_55918067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008027	chr14	-	404	1	Genic_Genomic	ENSMUSG00000002332.17	novel	NA	NA	NA	NA	6268	1	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTTCTCATTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	55976879	55976475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_55976500_55976900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008028	chr14	-	834	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	4373	0	4373	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55978774	55976476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008029	chr14	-	466	5	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	2158	576	2158	-576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGACCTTGCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	55980989	55977052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008030	chr14	-	479	4	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	1914	1707	1914	-1707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCAAGGGAAGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	55981233	55978183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55978331_55978639_55978773_55980910_55980991_55981114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008031	chr14	-	529	4	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	601	2163	601	-2163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGATCAAGGCACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55982546	55978639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55978773_55980910_55980991_55981114_55981259_55982374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008032	chr14	-	608	4	ISM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	25	4446	25	-4446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGACTCAGGTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	55983122	55980922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_55980991_55981114_55981259_55982374_55982546_55982897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008033	chr14	+	207	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	257	9204	257	-9204	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGCCCCAACTTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	55983406	55983753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55983478_55983617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008034	chr14	+	246	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	783	6058	783	-6058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAAGATGTATTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	55983932	55986899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55984068_55986788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008035	chr14	+	203	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	3649	5407	3649	-5407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTACCTGAGTTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	55986798	55987550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55986900_55987448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008036	chr14	+	246	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	4298	4345	4298	-4345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGGGTCAGCTATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	55987447	55988612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55987591_55988509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008037	chr14	+	210	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	5459	3327	5459	-3327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTCTTGCAGCTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	55988608	55989630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55988703_55989514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008038	chr14	+	274	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	6364	2832	6364	-2832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCTATTGGGGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	55989513	55990125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55989656_55989993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008039	chr14	+	224	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	6893	2542	6893	-2542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCGCTGGCTCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	55990042	55990415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55990120_55990268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008040	chr14	+	199	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	7217	2181	7217	-2181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGAGCAGCTTTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	55990366	55990776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55990506_55990716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008041	chr14	+	257	2	ISM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	7566	1710	7566	-1710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTGAGACTTGCAACGG	NA	NA	NA	NA	NA	NA	NA	NA	55990715	55991247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_55990823_55991097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008042	chr14	+	187	1	Genic_Genomic	ENSMUSG00000019297.10	novel	NA	NA	NA	NA	9625	4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCAGTTCTTTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55992774	55992961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_55992800_55993000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008043	chr14	-	524	4	FSM	ENSMUSG00000022221.15	ENST00000216274.10	523	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTGGGGTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	56025482	56024258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_56024376_56024570_56024618_56024738_56024897_56025280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008044	chr14	+	1044	3	ISM	ENSMUSG00000023411.13	ENST00000554591.5	2845	11	22	6961	22	-6794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTCGGCCTGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	56061170	56064287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56061414_56062465_56062594_56063614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008045	chr14	+	787	2	ISM	ENSMUSG00000023411.13	ENST00000553469.5	2418	10	-266	7079	17	-7079	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGCTTTCTTCAGCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	56062194	56064002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56062594_56063614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008046	chr14	+	1297	4	ISM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	634	3559	634	-3559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCAAAACCGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	56063948	56067522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56064711_56066059_56066223_56066821_56067022_56067350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008047	chr14	+	673	4	ISM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	2749	3028	-1812	-3028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACCTACTGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	56066063	56068053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56066223_56066821_56067022_56067350_56067524_56067912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008048	chr14	+	1002	5	FSM	ENSMUSG00000023411.13	ENST00000557767.5	690	5	7	-319	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56067882	56071400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_56068054_56069109_56069166_56069404_56069532_56069679_56069941_56071013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008049	chr14	+	462	3	NNC	ENSMUSG00000023411.13	novel	690	5	NA	NA	1527	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTAGTGGTCCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	56069402	56071082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_56069532_56069679_56069944_56071013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008050	chr14	-	644	3	FSM	ENSMUSG00000040380.15	ENST00000555436.1	681	3	38	-1	38	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGAACCTCTAGACAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	56123415	56120270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_56120635_56120923_56121044_56123255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008051	chr14	-	368	1	NIC	ENSMUSG00000040380.15	novel	4866	3	NA	NA	1051	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGAACCTCTAGACAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	56120638	56120270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_56120300_56120600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008052	chr14	+	673	4	ISM	ENSMUSG00000047153.5	ENST00000554268.1	753	5	133	23	133	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGCTTTGGCCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	56125375	56132679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56125475_56131444_56131557_56131743_56131846_56132319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008053	chr14	+	380	1	ISM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	9928	1527	7089	9	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTGAGTGTGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	56132331	56132711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56132300_56132700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008054	chr14	-	743	1	Genic_Genomic	ENSMUSG00000022223.10	novel	NA	NA	NA	NA	1892	1	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGCTTCCGCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	56135481	56134738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_56134700_56135500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008055	chr14	-	794	4	FSM	ENSMUSG00000022223.10	ENST00000555365.5	782	4	-1	-11	-1	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCCAAGGCAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	56137379	56135050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008056	chr14	-	777	4	NNC	ENSMUSG00000022223.10	novel	782	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGAGAAGGAGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	56137377	56135061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_56135470_56135699_56135844_56136640_56136763_56137274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008057	chr14	-	704	4	FSM	ENSMUSG00000022223.10	ENST00000538105.6	738	4	2	32	2	-32	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGGGCTGCCTTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	56137371	56135093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_56135470_56135699_56135844_56137103_56137187_56137270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008058	chr14	-	483	3	NNC	ENSMUSG00000022223.10	novel	738	4	NA	NA	186	-143	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTGTGGTACGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	56137187	56135204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_56135470_56135709_56135844_56137103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008059	chr14	-	402	4	ISM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	376	976	34	-654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGGTACGTTCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56137339	56135715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_56135844_56136640_56136763_56137103_56137187_56137270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008060	chr14	-	775	1	FSM	ENSMUSG00000058581.8	ENSMUST00000182247.2	780	1	7	-2	7	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACAAGCCACAGCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	56248765	56247990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_56248000_56248800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008061	chr14	-	490	2	ISM	ENSMUSG00000022157.9	ENSMUST00000015594.9	836	5	2066	-3	2066	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGCATCACTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	56320588	56319619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_56319858_56320336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008062	chr14	-	491	3	ISM	ENSMUSG00000022157.9	ENSMUST00000015594.9	836	5	1245	761	1245	-761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTCTGTGTGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	56321409	56320383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_56320592_56320811_56320945_56321259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008063	chr14	-	885	5	FSM	ENSMUSG00000022156.9	ENSMUST00000089549.8	916	5	30	1	30	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTGCATAGAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	56358052	56355083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_56355327_56355707_56355969_56356154_56356291_56356754_56356906_56357958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008064	chr14	+	238	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	8335	18665	8335	-18665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGGATCAGGAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	56914039	56916222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56914076_56916020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008065	chr14	+	297	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	10400	12347	10400	-12347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGATCTGCAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	56916104	56922540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56916276_56922414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008066	chr14	+	228	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	16914	8927	16914	-8927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGAGACTTGACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	56922618	56925960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56922708_56925821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008067	chr14	+	249	3	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	20196	6424	20196	-6424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCAGTGTAATAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	56925900	56928463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56925963_56926485_56926573_56928363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008068	chr14	+	239	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	22682	3900	22682	-3900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTCAACAGATTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	56928386	56930987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56928519_56930880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008069	chr14	+	259	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	25192	1690	25192	-1690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTGGTAAGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	56930896	56933197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56931036_56933077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008070	chr14	+	216	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	27371	686	27371	-686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCTTTGCTTCATATT	NA	NA	NA	NA	NA	NA	NA	NA	56933075	56934201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56933206_56934115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008071	chr14	+	281	2	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	28410	104	28410	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGGTCGAAAACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	56934114	56934783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56934200_56934587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008072	chr14	+	225	1	ISM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	28958	0	28958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56934662	56934887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_56934700_56934900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008073	chr14	-	2910	4	ISM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	29371	0	29371	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTGTTTTATTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	56986402	56958166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008074	chr14	-	2894	1	ISM	ENSMUSG00000040123.18	ENSMUST00000039812.16	5290	8	18236	2	17984	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTTGGTGAAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	57030937	57028043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_57028000_57030900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008075	chr14	+	257	1	FSM	ENSMUSG00000100017.3	ENSMUST00000186474.3	1911	1	1654	0	1654	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCATAGTAACATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	57051099	57051356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_57051100_57051400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008076	chr14	+	962	3	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	5	57094	5	-366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGGAGATGTATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57124101	57140958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_57124156_57125251_57125354_57140152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008077	chr14	+	1047	4	ISM	ENSMUSG00000021945.10	ENST00000382905.8	1185	6	15976	0	14877	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTTCTGTACTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	57140152	57150576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_57140655_57140915_57141010_57148534_57148818_57150408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008078	chr14	+	1448	4	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	16101	46453	14922	1023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGTGTCACTGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	57140197	57151599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_57141010_57148534_57148818_57150408_57150575_57151412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008079	chr14	+	920	2	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	71539	85	70360	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATTAAAACTTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57195635	57197967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_57195760_57197171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008080	chr14	+	884	1	ISM	ENSMUSG00000021945.10	ENSMUST00000022511.10	6974	24	71897	2102	71897	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGAGAGAGAGTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	57197172	57198056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_57197200_57198100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008081	chr14	+	294	2	ISM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	23477	67206	23477	-67206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGTGAAAGGTAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	57684995	57688187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_57685230_57688127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008082	chr14	-	812	4	ISM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	5484	-2	5484	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCATGAGGTTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	57803542	57787052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008083	chr14	-	931	1	ISM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	55531	0	43708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTCATTTGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57928049	57927118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_57927100_57928000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008084	chr14	-	1008	2	ISM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	51752	1159	39929	-1159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTGTATTTTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	57931828	57928277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_57929228_57931770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008085	chr14	-	1003	3	ISM	ENSMUSG00000021959.17	ENSMUST00000173990.8	3834	7	46483	2704	34678	-2704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTCGCTGTGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	57937079	57933704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_57933760_57934372_57934956_57936714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008086	chr14	-	1006	3	ISM	ENSMUSG00000021959.17	ENSMUST00000173990.8	3834	7	11721	6649	-84	-6649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCCTCCCGCCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	57971841	57937649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_57938016_57940378_57940512_57971334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008087	chr14	+	370	3	ISM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	37	5023	-1	-532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTGACTTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	58035673	58039072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_58035812_58035944_58036055_58038950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008088	chr14	+	1199	3	FSM	ENSMUSG00000021963.18	ENSMUST00000143600.2	521	3	76	-754	76	566	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTACAGAGTAAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	58035958	58040358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_58036055_58038950_58039074_58039378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008089	chr14	+	1029	1	Genic_Genomic	ENSMUSG00000021963.18	novel	NA	NA	NA	NA	6973	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAATTTTTCCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	58043067	58044096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_58043100_58044100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008090	chr14	-	907	1	Genic_Genomic	ENSMUSG00000021965.4	novel	NA	NA	NA	NA	18698	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATGTTGCCAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58044922	58044015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_58044000_58044900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008091	chr14	-	913	2	ISM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	18083	164	18083	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCGTGTCTAAAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	58045537	58044181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_58044989_58045431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008092	chr14	+	805	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	13	2059	13	-2059	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTTTGTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	58063703	58064694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_58063780_58063965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008093	chr14	+	812	1	Genic_Genomic	ENSMUSG00000021967.5	novel	NA	NA	NA	NA	2254	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGACCTACAAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	58065944	58066756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_58065900_58066800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008094	chr14	-	130	1	FSM	ENSMUSG00000065374.3	ENSMUST00000083440.3	147	1	17	0	17	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCCCTAAAAGGAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58068649	58068519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_58068500_58068600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008095	chr14	-	314	1	Genic_Genomic	ENSMUSG00000021969.9	novel	NA	NA	NA	NA	57207	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATCTGTTACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58070472	58070158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_58070200_58070500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008096	chr14	-	336	2	ISM	ENSMUSG00000021969.9	ENSMUST00000226057.2	2179	14	52552	699	52552	-699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAACATGCCATATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	58075127	58073847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_58074104_58075047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008097	chr14	-	335	3	ISM	ENSMUSG00000021969.9	ENSMUST00000226057.2	2179	14	46899	3405	46899	-3405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGGTACTAATTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	58080780	58076553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_58076663_58078285_58078376_58080644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008098	chr14	-	1652	5	ISM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	71969	-1	71969	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTCTCATCCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	58164750	58153716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008099	chr14	-	1116	1	NIC	ENSMUSG00000021973.10	novel	2329	12	NA	NA	81886	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTCTCTCATCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	58154833	58153717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_58153700_58154800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008100	chr14	+	1027	5	ISM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	6	27668	6	-27668	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTTCCCTAAATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	59716203	59757185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_59716634_59734251_59734394_59736992_59737158_59743713_59743833_59757014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008101	chr14	+	697	6	ISM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	18076	18499	18076	-18499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAATACCAGATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	59734273	59766354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008102	chr14	+	707	6	ISM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	20797	8213	20797	-8213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTCTTTAAGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	59736994	59776640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008103	chr14	+	1038	4	ISM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	48005	-347	48005	347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTCTCAGAGGAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	59764202	59785200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_59764265_59766290_59766357_59776510_59776655_59784434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008104	chr14	+	855	1	Genic_Genomic	ENSMUSG00000021981.11	novel	NA	NA	NA	NA	69301	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTCTCATTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	59785498	59786353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_59785500_59786400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008105	chr14	-	353	2	ISM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	22041	5925	21933	-5925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCACAGTAAGTACATGTA	NA	NA	NA	NA	NA	NA	NA	NA	59813352	59811102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_59811286_59813182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008106	chr14	-	369	3	ISM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	11663	8099	11555	-8099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTTCCCGCACATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	59823730	59813276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_59813353_59818773_59818824_59823487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008107	chr14	-	382	2	ISM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	8066	18589	7958	-18589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTTTGGTTTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	59827327	59823766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_59824058_59827236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008108	chr14	-	153	1	Genic_Genomic	ENSMUSG00000114797.2	novel	NA	NA	NA	NA	33217	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTAGGTCTCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	60455677	60455524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_60455500_60455700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008109	chr14	-	186	2	ISM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	17134	12145	17134	-12145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACTCCTCAAGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	60471760	60470010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_60470115_60471678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008110	chr14	+	1778	3	ISM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	32906	508	32796	-508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTTTTGAACATATGT	NA	NA	NA	NA	NA	NA	NA	NA	60535582	60539311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_60535644_60536363_60536491_60537721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008111	chr14	+	1653	1	Genic_Genomic	ENSMUSG00000021987.10	novel	NA	NA	NA	NA	35381	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTGTTTTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60538167	60539820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_60538200_60539800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008112	chr14	+	490	4	FSM	ENSMUSG00000071347.4	ENST00000382145.5	489	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGACACAAGGACTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	61009738	61017468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_61009912_61014473_61014537_61016700_61016737_61017250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008113	chr14	+	449	3	NNC	ENSMUSG00000071347.4	novel	489	4	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACACAAGGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61009759	61017467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_61009912_61014473_61014554_61017250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008114	chr14	+	348	4	NNC	ENSMUSG00000071347.4	novel	489	4	NA	NA	55	-77	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGAGAGGTTCAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	61009793	61017390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_61009912_61014482_61014537_61016700_61016737_61017250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008115	chr14	+	308	2	NNC	ENSMUSG00000071347.4	novel	489	4	NA	NA	4732	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACACAAGGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61014470	61017467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_61014562_61017250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008116	chr14	+	322	3	NNC	ENSMUSG00000071347.4	novel	489	4	NA	NA	4733	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGACACAAGGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61014471	61017467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_61014541_61016700_61016737_61017250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008117	chr14	-	302	2	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAGAAGGGAAGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	61017467	61014471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr14_-_61014545_61017238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008118	chr14	+	223	1	ISM	ENSMUSG00000071347.4	ENSMUST00000025940.7	1903	4	11663	850	7507	1	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGACACAAGGACTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	61017245	61017468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61017200_61017500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008119	chr14	+	175	2	ISM	ENSMUSG00000021993.11	ENSMUST00000225043.2	1548	6	185	11709	14	-828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGACAGTCCTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	61022258	61024857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61022320_61024743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008120	chr14	+	215	2	ISM	ENSMUSG00000021993.11	ENST00000412105.1	325	3	2542	-1	2542	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTACGTCCTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	61024786	61025686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61024918_61025602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008121	chr14	+	941	2	ISM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	90659	-3	90436	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTATCTGGTAGCGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	61112680	61141681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61112757_61140816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008122	chr14	+	1496	2	ISM	ENSMUSG00000048279.20	ENSMUST00000121091.2	4581	8	16610	3219	16304	-3219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTGGAATTTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	61427048	61429893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61427198_61428546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008123	chr14	+	1440	2	ISM	ENSMUSG00000048279.20	ENSMUST00000121091.2	4581	8	18210	2229	17904	-2229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCACCTTCTAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	61428648	61430883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61430042_61430836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008124	chr14	+	1419	2	ISM	ENSMUSG00000048279.20	ENST00000402364.1	14888	7	20131	11437	20131	4515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTGTGATGCGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	61430875	61441512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61430929_61440146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008125	chr14	+	1396	1	ISM	ENSMUSG00000048279.20	ENST00000402364.1	14888	7	40809	0	40809	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACTGGTTATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	61451553	61452949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61451600_61452900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008126	chr14	-	2223	1	Genic_Genomic	ENSMUSG00000035296.15	novel	NA	NA	NA	NA	37088	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTGCCTGTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	61458785	61456562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_61456600_61458800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008127	chr14	-	2287	2	ISM	ENSMUSG00000035296.15	ENSMUST00000077954.13	3515	8	33168	503	33102	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTTTGGAGGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	61462771	61457066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_61459226_61462643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008128	chr14	-	422	3	FSM	ENSMUSG00000021928.10	ENST00000378272.9	427	3	9	-4	9	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCCAAGAGGCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	61597818	61578651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_61578854_61584820_61584891_61597668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008129	chr14	-	204	1	NIC	ENSMUSG00000021928.10	novel	10092	4	NA	NA	18903	4	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCCAAGAGGCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	61578855	61578651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_61578700_61578900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008130	chr14	-	489	3	ISM	ENSMUSG00000021928.10	ENST00000378284.6	647	4	12936	0	12867	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTCCCAAGAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	61584891	61578655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_61578854_61579455_61579676_61584820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008131	chr14	-	358	2	FSM	ENSMUSG00000021928.10	ENST00000378270.5	357	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTCCCAAGAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	61597828	61578655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_61578854_61597668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008132	chr14	-	482	4	FSM	ENSMUSG00000021928.10	ENST00000569153.1	501	4	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTCCCAAGAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	61597739	61578655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008133	chr14	-	283	2	NNC	ENSMUSG00000021928.10	novel	357	2	NA	NA	20	-48	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATCCCAGGCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	61597807	61578703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_61578854_61597674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008134	chr14	-	450	3	ISM	ENSMUSG00000021928.10	ENST00000378284.6	647	4	0	799	0	-799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACAAGACAAAGCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	61597827	61579454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_61579676_61584820_61584891_61597668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008135	chr14	-	673	1	Genic_Genomic	ENSMUSG00000021929.10	novel	NA	NA	NA	NA	73995	4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGACTTATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	61603328	61602655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_61602700_61603300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008136	chr14	-	698	2	ISM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	71694	1874	71694	-1874	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTGATTAAAAAGATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	61605629	61604533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_61605179_61605576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008137	chr14	-	2677	1	ISM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	22217	0	21961	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTACCTTACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	61772118	61769441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_61769400_61772100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008138	chr14	-	977	4	FSM	ENSMUSG00000021930.15	ENST00000378195.6	973	4	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTATCCCTGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	61794081	61772095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61793969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008139	chr14	-	969	4	NNC	ENSMUSG00000021930.15	novel	973	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTATCCCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	61794077	61772096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_61772691_61777585_61777689_61783133_61783298_61793969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008140	chr14	+	1313	2	ISM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	252	208	252	-208	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCAAATACAAACTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	61837240	61843187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61837345_61841978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008141	chr14	+	1263	1	ISM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	6437	0	5144	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	61842132	61843395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_61842100_61843400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008142	chr14	-	329	1	NIC	ENSMUSG00000097589.10	novel	1442	5	NA	NA	13067	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGGCTTATACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	61873004	61872675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_61872700_61873000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008143	chr14	+	584	4	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	31960	257	31960	-257	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCGAGTCACAGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	62601476	62610184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_62601561_62602707_62602751_62607920_62608002_62609808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008144	chr14	+	430	1	Genic_Genomic	ENSMUSG00000021932.14	novel	NA	NA	NA	NA	40499	4	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATAGTTTTGTTGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62610015	62610445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_62610000_62610400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008145	chr14	+	1918	3	ISM	ENSMUSG00000035184.16	ENST00000322475.13	1943	4	22661	-3	22661	3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGACTGGCCCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	62824596	62844702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_62825336_62843321_62844291_62844492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008146	chr14	+	1819	3	NNC	ENSMUSG00000035184.16	novel	1943	4	NA	NA	22755	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGGGACTGGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	62824690	62844700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_62825336_62843321_62844291_62844495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008147	chr14	+	184	2	FSM	ENSMUSG00000014547.11	ENST00000612477.1	436	2	156	96	156	-96	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACTGCATTAGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	63075469	63076667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_63075507_63076520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008148	chr14	+	236	1	Genic_Genomic	ENSMUSG00000014547.11	novel	NA	NA	NA	NA	1215	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCCCCTTTCCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	63076528	63076764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_63076500_63076800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008149	chr14	+	359	2	FSM	ENSMUSG00000075573.5	ENSMUST00000100492.5	359	2	5	-5	5	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGCGTCCGTACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	63235530	63238614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_63235609_63238333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008150	chr14	+	334	3	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	9	11871	9	-8282	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACACAGCCTGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	63359919	63371501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63360015_63370764_63370916_63371413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008151	chr14	+	472	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	10853	9398	-2321	-5809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTGGGCACCTATT	NA	NA	NA	NA	NA	NA	NA	NA	63370763	63373974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63370916_63371413_63371500_63373056_63373172_63373855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008152	chr14	+	469	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	13144	7426	-30	-3837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGGCCTGGGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	63373054	63375946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63373172_63373855_63373975_63375481_63375568_63375799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008153	chr14	+	326	3	ISM	ENSMUSG00000021939.9	ENST00000524500.6	641	6	770	3216	770	-3216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAGCTCCAACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	63373854	63376567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63373975_63375481_63375568_63376447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008154	chr14	+	237	3	NNC	ENSMUSG00000021939.9	novel	641	6	NA	NA	823	-3248	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGACTTCTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	63373907	63376535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_63373975_63375481_63375564_63376447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008155	chr14	+	384	4	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	14030	6805	856	-3216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAGCTCCAACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	63373940	63376567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63373975_63375481_63375568_63375799_63375944_63376447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008156	chr14	+	336	3	ISM	ENSMUSG00000021939.9	ENST00000524500.6	641	6	2396	469	2396	-469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCAGTCCCCCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	63375480	63379314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63375568_63376447_63376565_63379182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008157	chr14	+	393	3	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	15887	4060	2713	-471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCAGTCCCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	63375797	63379312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63375944_63376447_63376565_63379182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008158	chr14	+	566	3	ISM	ENSMUSG00000021939.9	ENST00000524500.6	641	6	3362	-216	3362	216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCACAGTCTGCATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	63376446	63379999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63376565_63379182_63379312_63379680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008159	chr14	+	307	2	ISM	ENSMUSG00000021939.9	ENST00000524500.6	641	6	6087	-64	6087	64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGACAGGGGAGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	63379171	63379847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_63379312_63379680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008160	chr14	+	104	1	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	6595	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTTCATTGTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	63379679	63379783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_63379700_63379800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008161	chr14	-	849	1	Genic_Genomic	ENSMUSG00000021273.12	novel	NA	NA	NA	NA	18928	1	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGGTTTTAATGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	63383446	63382597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_63382600_63383400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008162	chr14	+	344	1	Genic_Genomic	ENSMUSG00000021939.9	novel	NA	NA	NA	NA	9946	2	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCCTGTCATCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	63383030	63383374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_63383000_63383400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008163	chr14	-	815	3	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	12415	1341	12415	-1338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGTGAACCTGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	63389959	63383939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_63384418_63388598_63388752_63389775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008164	chr14	-	652	4	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	5778	6000	5778	-5997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTTTATTTAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	63396596	63388598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_63388752_63389775_63389953_63394007_63394200_63396466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008165	chr14	-	579	4	ISM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	1439	7281	1439	-7278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGAACTCATAACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	63400935	63389879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_63389953_63394007_63394200_63396466_63396596_63400750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008166	chr14	-	784	3	ISM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-391	18149	-391	-18149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGGCTCTCTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	63415633	63400750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_63400935_63401980_63402079_63415131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008167	chr14	-	645	3	ISM	ENSMUSG00000021273.12	ENSMUST00000224625.2	3698	10	2	32832	2	-32829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCCAATCAACGTCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	63417025	63415430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_63415941_63416341_63416427_63416975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008168	chr14	-	613	3	ISM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	1749	-4	1749	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGGGCGCACGGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	63733342	63730126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_63730296_63731190_63731461_63733168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008169	chr14	-	488	3	ISM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	1502	1166	1502	-1166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCGCCATGAGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	63733589	63731296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_63731461_63733168_63733342_63733438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008170	chr14	-	355	3	ISM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	625	3079	625	-3079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGGGTATCCAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	63734466	63733209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_63733342_63733438_63733589_63734393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008171	chr14	+	721	4	FSM	ENSMUSG00000052099.15	ENST00000647727.1	719	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCTGGAGGAGACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	64332387	64334955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_64332572_64333358_64333619_64334506_64334644_64334815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008172	chr14	-	329	1	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	332950	0	190803	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCGCCTGCTGTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	64360402	64360073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_64360100_64360400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008173	chr14	-	463	4	FSM	ENSMUSG00000054733.10	ENST00000441698.6	458	4	1	-6	1	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCTGAAGGTTCCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	64551204	64360620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_64360803_64447876_64447984_64471277_64471383_64551135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008174	chr14	-	186	1	NIC	ENSMUSG00000054733.10	novel	1860	11	NA	NA	190397	4	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCTGAAGGTTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	64360808	64360622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_64360600_64360800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008175	chr14	-	337	3	ISM	ENSMUSG00000054733.10	ENSMUST00000210428.2	1180	6	131764	87798	28572	-87246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCCCAATTCTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	64522633	64447872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_64447984_64471277_64471383_64522512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008176	chr14	-	295	3	ISM	ENSMUSG00000054733.10	ENSMUST00000210428.2	1180	6	103193	111202	1	-110650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTGATGAGTGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	64551204	64471276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_64471383_64522512_64522633_64551135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008177	chr14	-	573	4	ISM	ENSMUSG00000054733.10	ENST00000528246.5	1169	7	175	161919	175	-161919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGCAATCCCACCTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	64655163	64522545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_64522633_64551135_64551205_64654530_64654605_64654820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008178	chr14	-	353	2	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14911	191061	14911	-190508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGATATCAACTCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	64678441	64551134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_64551205_64678158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008179	chr14	-	679	3	ISM	ENSMUSG00000021972.15	ENST00000524238.3	1687	9	71436	-1	71436	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCCTGCCCTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	65063139	65060630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_65061148_65062747_65062820_65063049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008180	chr14	-	519	1	NIC	ENSMUSG00000021972.15	novel	2931	10	NA	NA	73426	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCCTGCCCTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	65061149	65060630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_65060600_65061100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008181	chr14	+	587	3	ISM	ENSMUSG00000034532.10	ENST00000346498.6	695	4	23056	0	23056	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTTCAGGCTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	65531229	65536846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_65531440_65532841_65533007_65536634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008182	chr14	+	601	3	NNC	ENSMUSG00000034532.10	novel	695	4	NA	NA	23056	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTTCAGGCTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	65531229	65536846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_65531440_65532841_65533021_65536634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008183	chr14	-	801	1	ISM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	61803	0	55149	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	65768698	65767897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_65767900_65768700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008184	chr14	-	1069	3	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	38305	-639	38305	-393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAACTACCTTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	65785542	65768290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_65769050_65784582_65784665_65785314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008185	chr14	-	475	3	ISM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	20925	28648	20925	-28648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGAGGTATGTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	65802922	65797577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_65797764_65800700_65800828_65802760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008186	chr14	+	709	5	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	4	3913	4	-3913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGAAGTCCTTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	66043289	66051358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008187	chr14	+	683	5	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	6093	1078	6093	-1078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAATCTTCCAGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	66049378	66054193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008188	chr14	+	1093	4	ISM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	7988	-1	7988	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATTATCTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66051273	66055272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66051426_66052620_66052751_66054048_66054226_66054638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008189	chr14	+	638	1	NIC	ENSMUSG00000022033.10	novel	1720	8	NA	NA	11348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66054633	66055271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_66054600_66055300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008190	chr14	-	851	1	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	14106	0	14106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	66057337	66056486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_66056500_66057300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008191	chr14	-	927	2	ISM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	12295	253	12295	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAAATTCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	66059148	66056739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_66057548_66059029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008192	chr14	+	475	5	ISM	ENSMUSG00000022035.7	ENST00000497982.2	500	6	2990	-2	2990	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGGGGAGGAGGCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	66077895	66094348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66077945_66083744_66083785_66091550_66091627_66093872_66093977_66094142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008193	chr14	+	383	3	NNC	ENSMUSG00000022035.7	novel	500	6	NA	NA	16644	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCTGGGGAGGAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	66091549	66094346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_66091627_66093872_66093981_66094148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008194	chr14	+	486	3	ISM	ENSMUSG00000022035.7	ENST00000522915.5	692	7	19242	-47	19237	47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTTTAGGGAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	66094142	66102815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66094346_66097618_66097665_66102578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008195	chr14	+	190	1	ISM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	27828	1288	27673	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGATGAAAAGAACATATG	NA	NA	NA	NA	NA	NA	NA	NA	66102578	66102768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66102600_66102800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008196	chr14	+	486	1	ISM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	28820	0	28665	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATTGATATCTGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	66103570	66104056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66103600_66104100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008197	chr14	-	622	5	FSM	ENSMUSG00000034450.9	ENST00000454030.1	620	5	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66241627	66227821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_66227993_66228478_66228629_66235008_66235117_66240039_66240136_66241530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008198	chr14	-	541	4	ISM	ENSMUSG00000034450.9	ENST00000454030.1	620	5	1477	-3	1477	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66240151	66227821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_66227993_66228478_66228629_66235008_66235117_66240039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008199	chr14	-	620	5	NIC	ENSMUSG00000034450.9	novel	2263	12	NA	NA	-2	3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGCAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66241630	66227821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_66227993_66228478_66228629_66235008_66235117_66240039_66240131_66241530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008200	chr14	-	458	4	ISM	ENSMUSG00000022039.7	ENST00000347580.8	707	6	10436	0	10436	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTAAGCCTTGGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	66296272	66291233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_66291368_66293916_66293999_66295016_66295184_66296197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008201	chr14	-	490	4	ISM	ENSMUSG00000022039.7	ENST00000347580.8	707	6	4	3780	4	-3780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATTTTCAAGCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	66306704	66295013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_66295184_66296197_66296270_66305948_66306118_66306625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008202	chr14	-	404	5	ISM	ENSMUSG00000022040.9	ENST00000517536.5	836	10	12670	0	12670	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAGACTGGGGTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	66327029	66322378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_66322439_66322744_66322826_66323682_66323753_66324413_66324532_66326954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008203	chr14	+	1410	5	FSM	ENSMUSG00000022041.11	ENST00000240132.7	1432	5	25	-3	25	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTGGACAACCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	66380843	66388552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_66380913_66381369_66381415_66383854_66383965_66386235_66387269_66388399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008204	chr14	+	545	2	ISM	ENSMUSG00000022043.20	ENST00000521253.1	1216	4	104	4947	104	-4947	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGGCTCATCGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	66534685	66541685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66534999_66541453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008205	chr14	+	2600	3	NNC	ENSMUSG00000022043.20	novel	1216	4	NA	NA	6869	-459	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGTTTAGCTGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	66541450	66548414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_66541701_66545260_66545380_66546183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008206	chr14	+	2778	4	ISM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	6972	287	6870	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTCCCACCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	66541451	66548586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66541685_66544474_66544498_66545260_66545380_66546183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008207	chr14	+	529	3	ISM	ENSMUSG00000022043.20	ENST00000521253.1	1216	4	6871	271	6871	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGGCCTGCCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	66541452	66546361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_66541685_66545260_66545380_66546183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008208	chr14	+	2428	3	NNC	ENSMUSG00000022043.20	novel	1216	4	NA	NA	6940	-558	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAACTTGTACCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	66541521	66548315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_66541699_66545260_66545380_66546183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008209	chr14	+	2563	1	Genic_Genomic	ENSMUSG00000022043.20	novel	NA	NA	NA	NA	11730	1	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTTTTATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	66546311	66548874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_66546300_66548900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008210	chr14	-	1071	1	Genic_Genomic	ENSMUSG00000022048.9	novel	NA	NA	NA	NA	64756	2	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCTGTATTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	67041381	67040310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_67040300_67041400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008211	chr14	-	1353	3	ISM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	60647	1566	60647	-1566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTTTTGTGCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	67045490	67041878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_67042886_67044363_67044530_67045310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008212	chr14	-	2429	1	ISM	ENSMUSG00000022051.16	ENSMUST00000111115.8	3259	7	21189	0	21189	0	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCCATATATCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	67225116	67222687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_67222700_67225100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008213	chr14	-	2712	4	ISM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	14946	134	14925	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATTAATGGAGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	67231380	67222821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008214	chr14	-	758	1	Genic_Genomic	ENSMUSG00000022052.10	novel	NA	NA	NA	NA	55500	3	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACTTCATAATAACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	67252259	67251501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_67251500_67252300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008215	chr14	-	1351	5	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	46613	-1	46613	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGAATATGTTACGAAC	NA	NA	NA	NA	NA	NA	NA	NA	67261146	67253243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008216	chr14	+	946	2	Antisense	novelGene_ENSMUSG00000022052.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCAGAGAAAATATATACT	NA	NA	NA	NA	NA	NA	NA	NA	67253243	67257256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_+_67254105_67257171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008217	chr14	-	863	1	NIC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	53653	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGAATATGTTACGAAC	NA	NA	NA	NA	NA	NA	NA	NA	67254106	67253243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_67253200_67254100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008218	chr14	-	917	1	ISM	ENSMUSG00000048922.19	ENSMUST00000150006.9	3568	15	38572	22	38341	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCAGATTGTTCAAATC	NA	NA	NA	NA	NA	NA	NA	NA	67914718	67913801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_67913800_67914700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008219	chr14	+	341	1	ISM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	25872	0	25708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGGTTTCCTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	67979418	67979759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_67979400_67979800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008220	chr14	-	587	4	ISM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	9262	-2	9262	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAAGCTCTGTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	68750158	68747114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_68747306_68748195_68748293_68748686_68748893_68750065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008221	chr14	-	188	1	NIC	ENSMUSG00000022057.9	novel	2442	14	NA	NA	13193	10	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGGTTTAAAGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	68806336	68806148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_68806100_68806300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008222	chr14	-	392	3	ISM	ENSMUSG00000022057.9	ENST00000522298.1	1234	11	11104	0	11104	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAATACACGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	68808425	68806158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_68806335_68807519_68807651_68808340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008223	chr14	+	217	2	Antisense	novelGene_ENSMUSG00000022057.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATATGGAACATCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	68806158	68807563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_+_68806337_68807524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008224	chr14	-	328	3	ISM	ENSMUSG00000022057.9	ENST00000522298.1	1234	11	10581	1414	10581	-1414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATTATACCAAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	68808948	68807572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_68807651_68808340_68808423_68808780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008225	chr14	-	281	3	ISM	ENSMUSG00000022057.9	ENST00000522298.1	1234	11	10256	2222	10256	-2222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCCTTTTGTACTACAT	NA	NA	NA	NA	NA	NA	NA	NA	68809273	68808380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_68808423_68808780_68808948_68809201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008226	chr14	-	325	3	ISM	ENSMUSG00000022057.9	ENST00000522298.1	1234	11	8813	3043	8813	-3043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACATTTGTCATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	68810716	68809201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_68809274_68810274_68810335_68810523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008227	chr14	-	348	3	ISM	ENSMUSG00000022057.9	ENST00000522298.1	1234	11	4151	4364	4151	-4364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTTTGTTTTCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	68815378	68810522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_68810715_68814535_68814613_68815299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008228	chr14	-	153	2	ISM	ENSMUSG00000022057.9	ENST00000522298.1	1234	11	2853	9141	2853	-9141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCTGAATTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	68816676	68815299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_68815379_68816602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008229	chr14	-	667	3	ISM	ENSMUSG00000034248.8	ENSMUST00000037064.5	4174	4	35488	3128	35488	-3128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCCTTGCCGGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	69487073	69482424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_69482804_69485029_69485087_69486842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008230	chr14	+	462	2	ISM	ENSMUSG00000095463.9	ENSMUST00000064831.6	1842	12	16783	-127	16783	127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGAGGGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	69601818	69603315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_69601934_69602968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008231	chr14	+	404	1	Genic_Genomic	ENSMUSG00000095463.9	novel	NA	NA	NA	NA	19282	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACGTCTTTCCCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	69604317	69604721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_69604300_69604700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008232	chr14	+	458	3	ISM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	11897	12817	11873	4120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGAGCTTTGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	69804769	69810152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_69804970_69806401_69806608_69810100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008233	chr14	+	418	3	ISM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	13527	11818	13503	5119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGACTCCCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	69806399	69811151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_69806608_69810100_69810252_69811092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008234	chr14	+	425	1	Genic_Genomic	ENSMUSG00000022066.17	novel	NA	NA	NA	NA	29649	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGACGTCTTTCCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	69822545	69822970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_69822500_69823000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008235	chr14	-	395	2	ISM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	8811	-1	8811	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTGCGTCCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	69936131	69934755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_69935052_69936032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008236	chr14	-	297	1	NIC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	9890	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTGCGTCCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	69935052	69934755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_69934800_69935100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008237	chr14	-	992	3	ISM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	1612	2652	1612	-2652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGAGGCTTCCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	69943330	69937408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_69937480_69941402_69941576_69942582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008238	chr14	-	925	3	ISM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	327	7897	327	-7897	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGCGGAGGAAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	69944615	69942653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_69943328_69943995_69944134_69944502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008239	chr14	-	1158	1	Genic_Genomic	ENSMUSG00000034190.10	novel	NA	NA	NA	NA	14378	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTGTTGTCTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	69955605	69954447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_69954400_69955600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008240	chr14	-	1382	3	ISM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	13343	165	13343	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTGAGCAGAGGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	69956640	69954613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_69955750_69955963_69956147_69956577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008241	chr14	+	1069	5	FSM	ENSMUSG00000022089.10	ENST00000399977.8	643	5	3	-429	3	429	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCCCTTCATGCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	70361292	70375176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_70361331_70366298_70366450_70371884_70372041_70372184_70372320_70374587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008242	chr14	+	660	1	Genic_Genomic	ENSMUSG00000022089.10	novel	NA	NA	NA	NA	13731	25	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTTATATACAAAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	70375020	70375680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_70375000_70375700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008243	chr14	-	782	1	NIC	ENSMUSG00000033712.7	novel	3875	21	NA	NA	14445	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	70376398	70375616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_70375600_70376400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008244	chr14	-	1115	3	ISM	ENSMUSG00000033712.7	ENST00000389279.7	3875	21	13717	57	13717	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70377126	70375673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70376397_70376618_70376825_70376940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008245	chr14	-	906	4	ISM	ENSMUSG00000022090.11	ENSMUST00000153735.8	1578	10	8771	-13	-209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCTTTCCCTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70405497	70401666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70402243_70403538_70403657_70405109_70405238_70405413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008246	chr14	-	461	2	FSM	ENSMUSG00000022090.11	ENST00000443561.3	455	2	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGGTTGCTAGTGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	70405229	70401901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_70402243_70405109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008247	chr14	-	751	5	ISM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	5437	0	-2906	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCAGGTTGCTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	70408749	70401905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008248	chr14	-	589	5	ISM	ENSMUSG00000022090.11	ENST00000622702.1	1034	7	2906	194	2906	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTATGCCTGGAACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	70409025	70402099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008249	chr14	-	144	1	ISM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	54827	1647	52465	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTAGGGTGTTGTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	70611716	70611572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70611600_70611700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008250	chr14	-	210	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	50698	199	50698	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGCCATCCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70613483	70611771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70611886_70613387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008251	chr14	-	158	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	36788	2688	36788	-2688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAGCCTTTGATAACTA	NA	NA	NA	NA	NA	NA	NA	NA	70627393	70614260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70614366_70627340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008252	chr14	-	161	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	32620	18398	32620	-18398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAGAAGCTGTGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	70631561	70629970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70630030_70631459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008253	chr14	-	210	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	31291	19980	31291	-19980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGCGCATAAGCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	70632890	70631552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70631649_70632776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008254	chr14	-	158	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	25248	25610	25248	-25610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGTCTTGCTGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70638933	70637182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70637274_70638866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008255	chr14	-	169	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	24597	27312	24597	-27312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATAACCATGGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	70639584	70638884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70638952_70639482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008256	chr14	-	146	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	17395	34788	17395	-34788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGGGACTAGAGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	70646786	70646360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70646474_70646753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008257	chr14	-	154	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	16278	35181	16278	-35181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTGGGTTTTTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	70647903	70646753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70646835_70647830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008258	chr14	-	137	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	5984	37100	5984	-37100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATGTTGAAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	70658197	70648672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70648701_70658088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008259	chr14	-	154	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	5170	46587	5170	-46587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGACTGAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	70659011	70658159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70658200_70658897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008260	chr14	-	156	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	3766	48559	3766	-48559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGCTGGCAGCTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	70660415	70660131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70660212_70660339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008261	chr14	-	161	2	ISM	ENSMUSG00000033644.6	ENST00000356766.11	3106	22	153	48771	153	-48771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAGACTTCAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70664028	70660343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70660432_70663955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008262	chr14	-	710	1	Genic_Genomic	ENSMUSG00000000776.14	novel	NA	NA	NA	NA	3826	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAAGTGGTTCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	70676904	70676194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_70676200_70676900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008263	chr14	-	468	1	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	45163	0	45163	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGCCAGATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70712465	70711997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70712000_70712500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008264	chr14	-	808	3	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	40436	343	40436	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGAGACACTTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	70717192	70712340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70712690_70715292_70715544_70716984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008265	chr14	-	430	3	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	33913	5028	33913	-5028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGGTACAGAGGAAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	70723715	70717025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70717199_70717593_70717722_70723586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008266	chr14	-	452	3	ISM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	65	34274	65	-34274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGCGGGCAGCGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	70757563	70746271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70746355_70749020_70749135_70757308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008267	chr14	-	541	1	Genic_Genomic	ENSMUSG00000022097.5	novel	NA	NA	NA	NA	2569	3	mono-exon	FALSE	NA	NA	NA	NA	NA	489	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGCTTCTTTTCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	70758918	70758377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_70758400_70758900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008268	chr14	-	461	4	FSM	ENSMUSG00000022097.5	ENST00000520605.5	455	4	-4	-2	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCGCTTCTTTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	70761491	70758378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_70758556_70759244_70759356_70759593_70759717_70761441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008269	chr14	-	468	3	ISM	ENSMUSG00000022097.5	ENST00000524255.5	628	5	2125	-2	2125	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCGCTTCTTTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	70759362	70758378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70758556_70758756_70758926_70759240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008270	chr14	-	917	4	ISM	ENSMUSG00000022097.5	ENST00000521315.5	971	5	1282	0	1282	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGCGCTTCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70760205	70758380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70758913_70759244_70759356_70759593_70759717_70760054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008271	chr14	-	266	2	ISM	ENSMUSG00000022097.5	ENST00000524255.5	628	5	2553	87	2553	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAAGTCTGTAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	70758934	70758467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70758556_70758756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008272	chr14	-	417	3	ISM	ENSMUSG00000022097.5	ENST00000524255.5	628	5	1770	367	1770	-355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCTTTCAGGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70759717	70758747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_70758926_70759240_70759356_70759593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008273	chr14	-	354	3	NIC	ENSMUSG00000022097.5	novel	966	6	NA	NA	1821	-363	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAACAGTACCTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	70759666	70758755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_-_70758926_70759244_70759356_70759593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008274	chr14	+	275	3	ISM	ENSMUSG00000033589.5	ENST00000334530.9	1128	7	1297	1168	1297	-858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGCTGCCTCAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	70784369	70785183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_70784447_70784554_70784676_70785106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008275	chr14	+	269	2	ISM	ENSMUSG00000033589.5	ENST00000334530.9	1128	7	2596	324	2596	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAAATGGCACATGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	70785668	70786027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_70785780_70785869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008276	chr14	+	241	1	ISM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	3321	18	3042	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGGCCTCTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	70786114	70786355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_70786100_70786400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008277	chr14	+	580	2	ISM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	109	3445	-101	-1155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCCCACCTAGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	70815185	70816566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_70815551_70816351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008278	chr14	+	587	2	ISM	ENSMUSG00000045211.6	ENSMUST00000228768.2	1578	3	856	539	856	-539	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCATGTGGATGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	70816387	70817182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_70816566_70816773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008279	chr14	+	518	1	ISM	ENSMUSG00000045211.6	ENSMUST00000228554.2	3619	2	4208	116	3963	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACACCTGTAACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	70819494	70820012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_70819500_70820000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008280	chr14	+	1297	3	ISM	ENSMUSG00000099528.2	ENSMUST00000190896.2	1357	4	2848	-3	2848	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGTTTGTGGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	71093220	71111397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_71093350_71109694_71109847_71110381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008281	chr14	-	1166	1	ISM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	170892	0	63904	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	72776551	72775385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_72775400_72776600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008282	chr14	-	1918	5	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	46279	1400	46279	-1400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTCTGTTTTCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	72794176	72776790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008283	chr14	+	955	2	ISM	ENSMUSG00000022106.15	ENSMUST00000169479.8	3351	14	27041	672	16582	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTTTAGCCTCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	73415965	73420815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_73416004_73419898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008284	chr14	+	935	1	Genic_Genomic	ENSMUSG00000022106.15	novel	NA	NA	NA	NA	21341	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTAATTTTATTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	73420724	73421659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_73420700_73421700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008285	chr14	-	1781	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	16	-1	16	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGGATGCTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	73622713	73599664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008286	chr14	-	1329	4	NNC	ENSMUSG00000022108.9	novel	1796	6	NA	NA	18672	-49	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAGCTTTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73603966	73599714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_73600576_73601981_73602133_73603191_73603303_73603760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008287	chr14	-	765	4	FSM	ENSMUSG00000022108.9	ENST00000378549.5	746	4	-3	-16	-3	16	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTCTAAGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	73622667	73600316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_73600584_73601981_73602133_73605738_73605868_73622449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008288	chr14	-	751	4	NNC	ENSMUSG00000022108.9	novel	746	4	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTTTTTCTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73622664	73600319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_73600576_73601981_73602133_73605738_73605868_73622449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008289	chr14	-	745	4	NNC	ENSMUSG00000022108.9	novel	746	4	NA	NA	2	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTTTTTCTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73622662	73600319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_73600584_73601981_73602133_73605738_73605868_73622461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008290	chr14	+	1328	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTTTTTCAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73747464	73755985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008291	chr14	+	678	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	-101	26758	0	-26758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACTTGTAGACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	73790104	73806465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008292	chr14	+	461	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	7787	16299	7787	-16299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTACGCTCTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	73797992	73816924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_73798062_73806073_73806174_73806301_73806465_73816795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008293	chr14	+	475	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	15924	13966	15924	-13966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTACCTTCTTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	73806129	73819257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_73806174_73806301_73806465_73816795_73816925_73819118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008294	chr14	+	430	3	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	26590	4865	26590	-4865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCAGTGTATTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	73816795	73828358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_73816925_73819118_73819258_73828196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008295	chr14	+	567	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	28913	3029	28913	-3029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGGTCACCTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	73819118	73830194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_73819258_73828196_73828359_73828449_73828593_73830071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008296	chr14	+	416	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	38092	2016	38092	-2016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGGCTCTAATGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	73828297	73831207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_73828359_73828449_73828593_73830071_73830193_73831116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008297	chr14	+	654	4	ISM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	38313	40	38313	-40	intron_retention	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATTGATAAGAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	73828518	73833183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_73828593_73830071_73830193_73831116_73831206_73832813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008298	chr14	+	409	1	Genic_Genomic	ENSMUSG00000022110.14	novel	NA	NA	NA	NA	42970	2	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGTTATGGGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73833175	73833584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_73833200_73833600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008299	chr14	+	855	8	ISM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	2	5058	2	-4018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACAAGAGGCAAGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	74969738	74983147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008300	chr14	+	1482	6	ISM	ENSMUSG00000021996.17	ENSMUST00000177137.8	853	8	5191	-787	5191	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCATGACTAAAAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	74978597	74987952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983162_74987084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008301	chr14	+	918	1	Genic_Genomic	ENSMUSG00000021996.17	novel	NA	NA	NA	NA	13886	5	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCCAAATTCTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	74987292	74988210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_74987300_74988200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008302	chr14	-	479	1	Genic_Genomic	ENSMUSG00000068015.9	novel	NA	NA	NA	NA	50907	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGGATTGATTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	74992591	74992112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_74992100_74992600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008303	chr14	-	556	4	FSM	ENSMUSG00000021997.5	ENST00000676446.1	555	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACACAGAACTAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	75367029	75344704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_75344862_75358426_75358526_75360375_75360537_75366890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008304	chr14	+	231	2	ISM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	25257	28475	25257	-28475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCATTCTGGGGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	75547082	75553391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_75547243_75553320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008305	chr14	+	206	1	ISM	ENSMUSG00000022000.12	ENSMUST00000022577.6	6151	19	59848	0	59835	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75581660	75581866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_75581700_75581900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008306	chr14	-	901	3	FSM	ENSMUSG00000085829.2	ENSMUST00000131222.2	902	3	3	-2	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGAGAAAAGCCTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	76082401	76080816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_76081423_76081990_76082098_76082213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008307	chr14	+	729	4	ISM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	4	1618	4	-1375	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAATGGACCAAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	76082536	76084237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008308	chr14	+	316	3	NNC	ENSMUSG00000060126.15	novel	1169	6	NA	NA	-21	-1896	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAGGTACCGAAAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	76082720	76083716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_76082897_76083056_76083131_76083650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008309	chr14	+	422	3	ISM	ENSMUSG00000060126.15	ENSMUST00000142061.3	996	5	1	1755	1	-1402	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTTGCTAATTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	76082742	76084210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_76082897_76083642_76083834_76084133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008310	chr14	+	1063	5	FSM	ENSMUSG00000060126.15	ENST00000379055.5	823	5	3	-243	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGTGTGTGAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	76082798	76085855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008311	chr14	+	345	4	ISM	ENSMUSG00000060126.15	ENST00000379060.8	727	6	7	1557	7	-1452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGAAAGAGTAAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	76082847	76084160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_76082901_76083056_76083131_76083642_76083834_76084133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008312	chr14	+	532	4	NNC	ENSMUSG00000060126.15	novel	996	5	NA	NA	972	-27	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGCTGCAGTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	76083812	76085828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_76083834_76084133_76084240_76084683_76084799_76085538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008313	chr14	+	430	1	Genic_Genomic	ENSMUSG00000060126.15	novel	NA	NA	NA	NA	2696	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1255	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTAGTTGGAGACAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	76085536	76085966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_76085500_76086000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008314	chr14	-	617	1	Genic_Genomic	ENSMUSG00000067995.5	novel	NA	NA	NA	NA	113314	2	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGGCAACTGTTATCAC	NA	NA	NA	NA	NA	NA	NA	NA	76134991	76134374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_76134400_76135000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008315	chr14	-	784	3	ISM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	93184	125	93184	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATGATTACAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	76155121	76134501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_76135094_76144222_76144367_76155073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008316	chr14	-	1530	1	Genic_Genomic	ENSMUSG00000022008.5	novel	NA	NA	NA	NA	22996	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGAATCTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76325204	76323674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_76323700_76325200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008317	chr14	+	772	1	Genic_Genomic	ENSMUSG00000022009.2	novel	NA	NA	NA	NA	22436	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGCTGTCCGTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76374048	76374820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_76374000_76374800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008318	chr14	+	801	2	FSM	ENSMUSG00000022010.20	ENST00000501704.3	2726	2	1746	179	1746	-95	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATAGTCGTTCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	76654772	76745107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_76655198_76744731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008319	chr14	+	345	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	208	1209	156	-374	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGCCCAGTTTCAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	76742125	76743996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_76742282_76742688_76742738_76743856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008320	chr14	+	875	1	NIC	ENSMUSG00000022010.20	novel	2726	2	NA	NA	1874	0	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCAGGGCGCTGACACCA	NA	NA	NA	NA	NA	NA	NA	NA	76744411	76745286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_76744400_76745300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008321	chr14	-	438	1	Genic_Genomic	ENSMUSG00000052584.11	novel	NA	NA	NA	NA	23425	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGCGAGTTACCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	76770687	76770249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_76770200_76770700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008322	chr14	-	609	2	FSM	ENSMUSG00000052584.11	ENSMUST00000228055.2	705	2	98	-2	68	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTGCGAGTTACCGA	NA	NA	NA	NA	NA	NA	NA	NA	76794044	76770251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_76770687_76793870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008323	chr14	-	751	3	FSM	ENSMUSG00000052584.11	ENSMUST00000064517.9	748	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTGCGAGTTACCGA	NA	NA	NA	NA	NA	NA	NA	NA	76794113	76770251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_76770687_76787421_76787495_76793870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008324	chr14	-	275	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAGGACCATAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	76873057	76872782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr14_-_76872800_76873100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008325	chr14	+	2934	1	Genic_Genomic	ENSMUSG00000115817.2	novel	NA	NA	NA	NA	477	25	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGTGTGGTGAAACATA	NA	NA	NA	NA	NA	NA	NA	NA	77018743	77021677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_77018700_77021700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008326	chr14	+	367	1	ISM	ENSMUSG00000115596.2	ENSMUST00000227341.2	603	2	13238	0	13238	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGCTGGAGAGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	77112248	77112615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_77112200_77112600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008327	chr14	-	631	3	FSM	ENSMUSG00000044350.15	ENST00000627615.1	629	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTCTCTGCTGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	77270762	77266962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_77267227_77268172_77268403_77270625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008328	chr14	+	403	1	Antisense	novelGene_ENSMUSG00002076975.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTACCTAGACAAATTCG	NA	NA	NA	NA	NA	NA	NA	NA	77778087	77778490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_+_77778100_77778500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008329	chr14	-	241	1	Genic_Genomic	ENSMUSG00000022013.5	novel	NA	NA	NA	NA	54006	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTCAATGTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	78058360	78058119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_78058100_78058400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008330	chr14	-	190	1	ISM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	30260	0	30260	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGCTTTTTGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78515074	78514884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_78514900_78515100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008331	chr14	-	173	2	ISM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	23555	1481	23555	-1481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACGGAAAACTAAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	78521779	78516365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_78516438_78521678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008332	chr14	-	269	2	ISM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	7920	6792	7920	-6792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTACATTTCCACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	78537414	78521676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_78521778_78537246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008333	chr14	-	305	2	ISM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	70	22407	70	-22407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGTGCAGAAGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78545264	78537291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_78537440_78545107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008334	chr14	-	620	2	FSM	ENSMUSG00000115090.2	ENSMUST00000228931.2	614	2	0	-6	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAATGTAATTTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79184667	79182613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_79183145_79184578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008335	chr14	-	309	1	FSM	ENSMUSG00000115539.2	ENSMUST00000227296.2	620	1	388	-77	388	77	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGTTTCATTGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79203620	79203311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_79203300_79203600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008336	chr14	-	910	5	NNC	ENSMUSG00000022018.8	novel	918	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACTTTGAAAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	79539083	79526195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_79526560_79527683_79527747_79529110_79529213_79538154_79538341_79538888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008337	chr14	-	918	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACTTTGAAAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	79539085	79526195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008338	chr14	+	1942	1	FSM	ENSMUSG00000075502.3	ENSMUST00000226192.2	2984	1	1042	0	1042	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGAGTTCGTATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79690316	79692258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_79690300_79692300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008339	chr14	-	809	1	Genic_Genomic	ENSMUSG00000022023.7	novel	NA	NA	NA	NA	20779	4	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTGTTCTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	79698181	79697372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_79697400_79698200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008340	chr14	-	1095	3	ISM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	14055	1458	14055	-1458	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGACGTGCAGAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	79704905	79698834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_79699570_79703622_79703790_79704712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008341	chr14	+	1376	5	ISM	ENSMUSG00000036461.17	ENST00000625359.1	1814	8	30942	0	30942	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATGGGTGGGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	79804698	79818220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008342	chr14	+	682	2	ISM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	37145	5850	37145	-5850	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTTGGAATGAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79862275	79866786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_79862463_79866291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008343	chr14	+	574	1	Genic_Genomic	ENSMUSG00000022024.11	novel	NA	NA	NA	NA	46933	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGAGTGGATTGAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	79872063	79872637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_79872100_79872600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008344	chr14	+	136	2	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	1723	39626	1723	-39626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGCTGCGCCAAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	87696192	87709581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_87696259_87709511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008345	chr14	+	653	5	ISM	ENSMUSG00000022019.17	ENST00000196169.7	2073	11	15059	26070	15057	-26070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTAACGGGGAACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	87709526	87723137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008346	chr14	+	676	6	ISM	ENSMUSG00000022019.17	ENST00000196169.7	2073	11	17684	24579	17682	-24579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATGAGGAAGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	87712151	87724628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008347	chr14	+	200	3	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	17776	30938	17776	-30938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAAGCAAAGAACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	87712245	87718269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_87712277_87714825_87714898_87718172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008348	chr14	+	1146	5	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	23784	5357	23784	-5357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCGATTAAGTCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	87718253	87743850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008349	chr14	+	812	2	ISM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	48888	0	48888	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTGATCCAAATTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	87743357	87749207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_87744043_87749080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008350	chr14	+	128	1	NIC	ENSMUSG00000022019.17	novel	5280	12	NA	NA	54610	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTGATCCAAATTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	87749079	87749207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_87749100_87749200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008351	chr14	-	509	1	FSM	ENSMUSG00000062611.5	ENSMUST00000074245.5	792	1	352	-69	352	69	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATATGAGATTGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	88360892	88360383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_88360400_88360900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008352	chr14	-	314	1	ISM	ENSMUSG00000022076.11	ENSMUST00000022666.9	6645	11	413518	2535	413518	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCACTTTTATAAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	96343020	96342706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_96342700_96343000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008353	chr14	-	424	2	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	395744	879	395712	-879	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAACATCTGGCCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	96360826	96343585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_96343836_96360652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008354	chr14	-	333	2	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	367057	31366	367025	-31366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCTCCTGCTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	96389513	96374072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_96374234_96389341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008355	chr14	-	453	3	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	278864	46633	278832	-46633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGATATTCCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	96477706	96389339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_96389505_96438648_96438874_96477643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008356	chr14	-	341	2	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	238979	134936	238947	-134936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACTCTAGATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	96517591	96477642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_96477831_96517438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008357	chr14	-	331	2	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	172170	174809	172138	-174809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGACATGCAGCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	96584400	96517515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_96517652_96584205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008358	chr14	-	302	2	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	150493	241498	150461	-241498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAGATTTAATATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	96606077	96584204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_96584403_96605973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008359	chr14	-	396	2	ISM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	1066	263265	1034	-263265	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGTAAAATAACTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	96755504	96605971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_96606111_96755247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008360	chr14	-	1298	1	ISM	ENSMUSG00000055639.17	ENSMUST00000071533.13	5219	12	381387	6	381387	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCGACTTTATTTATCG	NA	NA	NA	NA	NA	NA	NA	NA	98025592	98024294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_98024300_98025600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008361	chr14	-	1393	2	ISM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	4	232012	4	-232012	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGATTATTTATGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	98407189	98256307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_98256430_98405918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008362	chr14	-	489	1	FSM	ENSMUSG00000060377.5	ENSMUST00000081987.5	449	1	-36	-4	-36	4	mono-exon	FALSE	NA	NA	NA	NA	NA	875	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTACATGTATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	99231790	99231301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_99231300_99231800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008363	chr14	-	543	1	Genic_Genomic	ENSMUSG00000033186.10	novel	NA	NA	NA	NA	11008	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCCTTTTGATATACT	NA	NA	NA	NA	NA	NA	NA	NA	99272521	99271978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_99272000_99272500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008364	chr14	-	788	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	10	1442	10	-200	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAACATCTCAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	99283546	99273421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_99273947_99277950_99278097_99283429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008365	chr14	+	405	2	ISM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	65	27074	65	-27074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAAGTTTCTCTTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	99283877	99284902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_99284117_99284736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008366	chr14	+	439	3	ISM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	15140	6397	15140	-6397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCTCAGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	99298952	99305579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_99299120_99299704_99299841_99305443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008367	chr14	+	417	2	ISM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	26220	630	26220	-630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAATTATGGCAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	99310032	99311346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_99310185_99311081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008368	chr14	+	416	1	ISM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	27748	0	27748	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	99311560	99311976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_99311600_99312000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008369	chr14	+	2974	4	FSM	ENSMUSG00000005148.9	ENST00000539231.5	2976	4	4	-2	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCCTTCTTGACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	99532184	99552474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_99532337_99538816_99539691_99540853_99540914_99550586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008370	chr14	+	2790	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	344	218	-119	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTAAGGCTCCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	99536470	99552254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008371	chr14	+	1893	1	Genic_Genomic	ENSMUSG00000005148.9	novel	NA	NA	NA	NA	13991	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCCTTCTTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	99550580	99552473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_99550600_99552500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008372	chr14	-	918	1	ISM	ENSMUSG00000042888.11	ENSMUST00000057718.11	1862	3	1444	18	1444	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACTCCGAGAATCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	101436061	101435143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_101435100_101436100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008373	chr14	-	1021	2	FSM	ENSMUSG00000042888.11	ENST00000335524.7	1919	2	9	889	9	-889	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCCTCAGTCCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	101437790	101436033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_101436922_101437657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008374	chr14	-	698	1	ISM	ENSMUSG00000033083.17	ENSMUST00000161991.8	6483	19	164535	1441	63200	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATTTAAGCCGAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	101681934	101681236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_101681200_101681900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008375	chr14	-	837	2	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	59992	314	59992	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTTTCCCTGCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	101685142	101681550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_101682208_101684962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008376	chr14	-	698	2	ISM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	4	61306	4	-61306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTATCAGGTCCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	101745130	101742542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_101742634_101744523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008377	chr14	-	1155	2	ISM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	12	63390	12	-63390	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATGAGAACAACCAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	101846053	101744626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_101745127_101845398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008378	chr14	-	616	1	ISM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	6305	0	6076	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATGACGTGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	101871817	101871201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_101871200_101871800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008379	chr14	-	729	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	13	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAACGCTATAGAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	101878109	101871541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_101871829_101874389_101874543_101877820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008380	chr14	+	322	3	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	22	-29525	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAATGCCTGTGGAACGA	NA	NA	NA	NA	NA	NA	NA	NA	101891451	101904036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_101891556_101903196_101903326_101903947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008381	chr14	+	343	3	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	55	-29457	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACCACTTTCTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	101891484	101904104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_101891542_101903196_101903326_101903947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008382	chr14	+	361	3	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	11779	29047	11779	-29047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTACCTTCCTTCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	101903208	101904514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_101903326_101903947_101904105_101904427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008383	chr14	+	294	3	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	12516	27548	12516	-27548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCACATTTCTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	101903945	101906013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_101904105_101904427_101904514_101905964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008384	chr14	+	361	3	ISM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	36576	0	36576	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	101928005	101933561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_101928084_101932594_101932654_101933337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008385	chr14	+	232	1	Genic_Genomic	ENSMUSG00000022111.10	novel	NA	NA	NA	NA	41901	1	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTTTGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	101933330	101933562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_101933300_101933600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008386	chr14	+	746	1	FSM	ENSMUSG00000115512.2	ENSMUST00000227837.2	541	1	-36	-169	-36	169	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAGGAGAGAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	103247645	103248391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_103247600_103248400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008387	chr14	+	1095	3	ISM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	1418	1098	1418	-1098	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGAATTACTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	103309069	103313966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_103309236_103310622_103310849_103313263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008388	chr14	+	690	1	ISM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	6723	0	6723	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTGCATCTTGTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	103314374	103315064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_103314400_103315100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008389	chr14	-	2905	4	ISM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	3523	151	3499	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTTATTTGAAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	103332912	103318620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008390	chr14	-	424	1	ISM	ENSMUSG00000033004.17	ENSMUST00000159855.8	15233	85	232966	0	232945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGTAAAGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	103351270	103350846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_103350800_103351300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008391	chr14	-	458	2	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	229632	459	229632	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTGTGACGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	103354583	103351306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_103351672_103354490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008392	chr14	-	429	3	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	220018	9904	220018	-9904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTGCCTCGGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	103364197	103360751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_103360937_103361834_103361939_103364057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008393	chr14	-	441	3	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	200728	29760	200728	-29760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTGGCTTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	103383487	103380607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_103380736_103381689_103381851_103383335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008394	chr14	-	476	4	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	192743	33582	192743	-33582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCGGCTCATATCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	103391472	103384429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_103384469_103385943_103386102_103389555_103389724_103391361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008395	chr14	-	455	2	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	176855	42969	176855	-42969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCACCACAGGATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	103407360	103393816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_103394204_103407292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008396	chr14	-	464	3	ISM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	61417	162961	61417	-162961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTATTTTATTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	103522798	103513808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_103513955_103520033_103520239_103522685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008397	chr14	+	1858	5	FSM	ENSMUSG00000055717.14	ENST00000314070.9	1858	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATGAATGTGCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	103921671	103942353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_103921820_103923104_103923255_103932603_103932760_103939952_103940275_103941271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008398	chr14	+	2103	6	FSM	ENSMUSG00000055717.14	ENST00000358679.3	2101	6	0	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCTCACGCATGAATG	NA	NA	NA	NA	NA	NA	NA	NA	103921758	103942343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008399	chr14	+	390	2	ISM	ENSMUSG00000055717.14	ENST00000351546.7	2132	5	33	16663	33	-16651	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCCCCACTCACAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	103923137	103925690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_103923335_103925497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008400	chr14	+	233	1	ISM	ENSMUSG00000055717.14	ENST00000314070.9	1858	5	20449	0	19016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATGAATGTGCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	103942120	103942353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_103942100_103942400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008401	chr14	-	1570	1	Genic_Genomic	ENSMUSG00000048349.10	novel	NA	NA	NA	NA	4755	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTGTATCGGTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	104700680	104699110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_104699100_104700700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008402	chr14	-	1025	1	ISM	ENSMUSG00000022120.5	ENSMUST00000022716.4	3420	6	44072	0	44072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTTGATGTCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	104715996	104714971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_104715000_104716000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008403	chr14	-	162	2	Antisense	novelGene_ENSMUSG00000060143.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACAGCAGGCAGGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	105919401	105901127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr14_-_105901143_105919254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008404	chr14	+	254	1	FSM	ENSMUSG00000060143.8	ENSMUST00000073238.7	384	1	153	-23	153	23	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAAGCATGCAGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	105919414	105919668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_105919400_105919700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008405	chr14	-	1019	1	ISM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	3854	0	3854	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTTGTTTTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	106130399	106129380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_106129400_106130400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008406	chr14	-	1222	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	0	865	0	-865	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACATAGCATTATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	106134253	106130245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_106131236_106134021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008407	chr14	-	1027	2	NNC	ENSMUSG00000022114.6	novel	2087	2	NA	NA	75	-977	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGTGCCAGGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106134178	106130357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_-_106131228_106134021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008408	chr14	+	998	2	ISM	ENSMUSG00000033214.11	ENST00000325089.7	4494	3	95	4041	95	-3313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACAGACTCCTTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	111913605	111917260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_111913713_111916369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008409	chr14	+	997	2	ISM	ENSMUSG00000033214.11	ENST00000325089.7	4494	3	6222	-68	6222	68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCCAATGCCAATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	111919732	111921369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_111920527_111921166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008410	chr14	+	554	1	FSM	ENSMUSG00000058126.8	ENSMUST00000072359.8	2147	1	1588	5	1588	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTTCTGTTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	113553627	113554181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_+_113553600_113554200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008411	chr14	+	559	2	ISM	ENSMUSG00000058571.12	ENSMUST00000078849.12	1668	9	509715	350536	509715	-350536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGCATTCAACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	117673062	117861962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_117673456_117861796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008412	chr14	+	1368	1	Genic_Genomic	ENSMUSG00000058571.12	novel	NA	NA	NA	NA	1049280	39	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCTGGTACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	118212627	118213995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_118212600_118214000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008413	chr14	-	688	1	Genic_Genomic	ENSMUSG00000022130.11	novel	NA	NA	NA	NA	19587	1	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCTTTTTATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	118350572	118349884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_118349900_118350600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008414	chr14	-	982	4	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	16516	10	16516	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTTTTTAGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	118353643	118349897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008415	chr14	+	315	2	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	27	23366	27	-23366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGCACCGTCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	118374596	118377307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_118374753_118377148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008416	chr14	+	271	2	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	2576	15068	2576	-15068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAGGGGGAGGAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	118377145	118385605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_118377308_118385496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008417	chr14	+	378	2	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	10934	9509	10934	-9509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCCCCAGTGCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	118385503	118391164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_118385698_118390980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008418	chr14	+	390	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	16410	5207	16410	-5207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGAGCCGATGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	118390979	118395466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_118391162_118391288_118391339_118395308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008419	chr14	+	395	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	16725	3076	16725	-3076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGCTGGGCAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	118391294	118397597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_118391339_118395308_118395467_118397404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008420	chr14	+	488	3	ISM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	22831	459	22831	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACCGTCTTGCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118397400	118400214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_118397597_118398968_118399047_118400000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008421	chr14	+	249	1	Genic_Genomic	ENSMUSG00000022131.4	novel	NA	NA	NA	NA	25859	4	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCATTTGTTTATTCACG	NA	NA	NA	NA	NA	NA	NA	NA	118400428	118400677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_118400400_118400700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008422	chr14	-	330	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	206059	0	206059	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAGGACATCATCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	118737464	118721744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118721853_118727910_118728046_118737377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008423	chr14	-	388	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	189554	16375	189554	-16375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGAGCCGAGGCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	118753969	118738119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118738293_118745004_118745095_118753844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008424	chr14	-	419	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	179707	23280	179707	-23280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGGGCCTTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	118763816	118745024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118745095_118753844_118754001_118763623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008425	chr14	-	384	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	178109	32116	178109	-32116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATCATACCACAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	118765414	118753860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118754001_118763623_118763816_118765362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008426	chr14	-	472	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	176177	41888	176177	-41888	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAAAGGTTGGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	118767346	118763632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118763816_118765362_118765464_118766378_118766490_118767269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008427	chr14	-	382	4	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	172057	43631	172057	-43631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGAGAATATGGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	118771466	118765375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118765464_118766378_118766490_118767269_118767390_118771403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008428	chr14	-	369	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	111212	49659	111212	-49659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACCCGGGGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	118832311	118771403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118771555_118790695_118790776_118832173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008429	chr14	-	397	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	94587	114979	94587	-114979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCATCTCCTGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	118848936	118836723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118836936_118841568_118841666_118848848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008430	chr14	-	379	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	90787	127101	90787	-127101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTCTGTCTTACGTC	NA	NA	NA	NA	NA	NA	NA	NA	118852736	118848845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118848936_118849129_118849225_118852542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008431	chr14	-	380	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	89654	127384	89654	-127384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGCTTTCCGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	118853869	118849128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118849225_118852542_118852735_118853777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008432	chr14	-	379	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	87116	130808	87116	-130808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGAAGGTGATGACTC	NA	NA	NA	NA	NA	NA	NA	NA	118856407	118852552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118852735_118853777_118853868_118856300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008433	chr14	-	353	2	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	78410	134555	78410	-134555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCCCGTGATTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	118865113	118856299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118856403_118864863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008434	chr14	-	519	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	74990	143119	74990	-143119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGTACAGTACAATCT	NA	NA	NA	NA	NA	NA	NA	NA	118868533	118864863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118865114_118867029_118867156_118868390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008435	chr14	-	364	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	73941	145284	73941	-145284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTGGGGTAGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	118869582	118867028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118867156_118868390_118868555_118869509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008436	chr14	-	418	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	51740	146704	51740	-146704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTATTCTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	118891783	118868448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118868555_118869509_118869600_118891561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008437	chr14	-	431	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	37643	147774	37643	-147774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGACCAAGTACGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	118905880	118869518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118869600_118891561_118891784_118905752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008438	chr14	-	378	3	ISM	ENSMUSG00000032849.15	ENST00000646439.1	3842	30	36999	169904	36999	-169904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATACTACATCATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	118906524	118891648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_118891784_118905752_118905880_118906408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008439	chr14	+	1597	3	ISM	ENSMUSG00000022136.9	ENST00000376795.6	1674	11	37096	-898	37096	898	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTAAGAATTATTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	119212541	119216751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_119212677_119214121_119214271_119215438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008440	chr14	+	1395	1	ISM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	42327	0	42269	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTACTTGCTTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	119217714	119219109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_119217700_119219100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008441	chr14	-	342	1	Genic_Genomic	ENSMUSG00000115220.2	novel	NA	NA	NA	NA	426	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCGAGCATCAGACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	119220746	119220404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_119220400_119220700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008442	chr14	-	439	2	FSM	ENSMUSG00000115220.2	ENSMUST00000227218.2	673	2	88	146	88	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCCCAGCCTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	119221084	119220551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr14_-_119220833_119220926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008443	chr14	+	549	2	ISM	ENSMUSG00000022139.18	ENST00000345429.10	4607	9	34	106631	34	-104559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACACATTCCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120513174	120562479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_120513318_120562073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008444	chr14	+	868	3	ISM	ENSMUSG00000022139.18	ENST00000397601.5	4228	6	62	46223	62	-44151	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGTCCCAACAGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	120562206	120622887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_120562825_120616561_120616727_120622802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008445	chr14	+	621	3	ISM	ENSMUSG00000022139.18	ENST00000397601.5	4228	6	60657	35093	60657	-33021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGCTCTCCGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	120622801	120634017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_120623004_120626311_120626576_120633862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008446	chr14	+	1107	2	ISM	ENSMUSG00000022139.18	ENST00000397601.5	4228	6	71767	1762	71767	310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTTTAGTCACTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	120633911	120667348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_120634017_120666346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008447	chr14	+	506	2	ISM	ENSMUSG00000022139.18	ENSMUST00000227594.2	2334	9	98184	283	79903	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGCTTTAGTTTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	120642047	120666755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_120642145_120666346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008448	chr14	+	1836	1	Genic_Genomic	ENSMUSG00000022139.18	novel	NA	NA	NA	NA	105131	1	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGCGGTCTTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	120667275	120669111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_+_120667300_120669100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008449	chr14	+	154	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	48	30562	48	-30562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCTTAGCCCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	121148683	121154849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121148756_121154767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008450	chr14	+	202	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	6136	27952	6136	-27952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACACAATCCAGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	121154771	121157459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121154849_121157334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008451	chr14	+	188	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	10914	24863	10914	-24863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGCCCTTCATTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	121159549	121160548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121159641_121160451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008452	chr14	+	156	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	11863	24413	11863	-24413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAACACACCTTTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	121160498	121160998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121160549_121160892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008453	chr14	+	182	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	12303	21676	12303	-21676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAACTCCCTCGATC	NA	NA	NA	NA	NA	NA	NA	NA	121160938	121163735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121160998_121163612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008454	chr14	+	176	2	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	15021	-21494	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATACCAGTCTCATCGC	NA	NA	NA	NA	NA	NA	NA	NA	121163656	121163917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr14_+_121163740_121163824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008455	chr14	+	166	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	15200	19486	15200	-19486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGATGAGCTAGAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	121163835	121165925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121163946_121165869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008456	chr14	+	148	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	17281	18592	17281	-18592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTACCAGTGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	121165916	121166819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121165958_121166712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008457	chr14	+	235	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	18074	15031	18074	-15031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTACCAATAAATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	121166709	121170380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121166820_121170255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008458	chr14	+	169	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	21643	14882	21643	-14882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAAAGAAATTTCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	121170278	121170529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121170381_121170462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008459	chr14	+	188	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	23909	11505	23909	-11505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACCCCCAGGTAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	121172544	121173906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121172660_121173833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008460	chr14	+	234	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	27346	9118	27346	-9118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCAGATGTTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	121175981	121176293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121176110_121176187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008461	chr14	+	169	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	29641	6329	29641	-6329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGAGGAGCTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	121178276	121179082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121178407_121179043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008462	chr14	+	155	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	30604	5254	30604	-5254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCCATTAATTGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	121179239	121180157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121179298_121180060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008463	chr14	+	230	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	31442	4196	31442	-4196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGACAACAGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	121180077	121181215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121180184_121181091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008464	chr14	+	281	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	32509	3553	32509	-3553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTGTGTGAATGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121181144	121181858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121181312_121181744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008465	chr14	+	167	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	33260	1834	33260	-1834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGAAGACCCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	121181895	121183577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121181974_121183488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008466	chr14	+	176	2	ISM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	34873	1227	34873	-1227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCATCCAGGAGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	121183508	121184184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121183631_121184130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008467	chr14	+	155	1	ISM	ENSMUSG00000030662.11	ENST00000261574.10	4751	28	50611	70	36621	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	121185256	121185411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121185300_121185400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008468	chr14	+	571	2	ISM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	245307	965	245307	-965	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAGTAAATGAGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	121518282	121520191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121518384_121519721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008469	chr14	+	552	1	ISM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	247629	0	247629	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121520604	121521156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_121520600_121521200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008470	chr14	-	851	1	Genic_Genomic	ENSMUSG00000063410.9	novel	NA	NA	NA	NA	91741	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCATACTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	121524604	121523753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr14_-_121523800_121524600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008471	chr14	-	961	2	ISM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	87247	169	86846	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTTGTGGATGAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	121529499	121523923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_121524777_121529391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008472	chr14	-	596	4	ISM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	76077	2673	76077	-2673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTAAGTTGCCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	121540268	121532070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_121532213_121534546_121534733_121539597_121539756_121540158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008473	chr14	+	1505	4	ISM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	104646	-1	104646	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAGTAGTTTTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	122220677	122258447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_122220728_122231636_122231883_122246202_122246326_122257361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008474	chr14	+	1392	4	ISM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	43696	0	43466	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCCAAAGTGTAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	122388145	122397016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_122388298_122389375_122389488_122392739_122392912_122396060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008475	chr14	+	966	1	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	51371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCCAAAGTGTAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	122396050	122397016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_122396000_122397000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008476	chr14	+	497	3	ISM	ENSMUSG00000025545.11	ENST00000376354.5	780	5	7962	0	7962	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCACGTTAGTCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	122616612	122639560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_122616783_122621609_122621735_122639358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008477	chr14	-	724	1	ISM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	21579	0	21537	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGGTCCTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	123128995	123128271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_123128300_123129000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008478	chr14	-	745	2	ISM	ENSMUSG00000041625.16	ENSMUST00000161322.3	524	4	12635	239	12607	-239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATTTGCTTTGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	123137925	123128521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_123129229_123137887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008479	chr14	-	275	1	ISM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	64038	0	59049	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	123156657	123156382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_-_123156400_123156700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008480	chr14	+	808	4	ISM	ENSMUSG00000032925.17	ENST00000618057.4	1853	10	0	129726	0	-129726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTCATTCGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	123897493	124081350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_123897819_123898702_123898921_124077974_124078098_124081208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008481	chr14	+	450	3	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	124	145763	124	-145763	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTACATCCCTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	123897736	124065313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_123897819_123898702_123898921_124065163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008482	chr14	+	358	2	ISM	ENSMUSG00000032925.17	ENST00000618057.4	1853	10	1193	132978	1074	-132978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATGCTAAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	123898686	124078098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_123898921_124077974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008483	chr14	+	500	3	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	1079	132978	1079	-132978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATGCTAAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	123898691	124078098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_123898921_124065163_124065311_124077974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008484	chr14	+	565	4	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	167547	127076	167547	-127076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTGATTCTTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	124065159	124084000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_124065311_124077974_124078098_124081208_124081350_124083850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008485	chr14	+	535	4	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	180388	116076	180388	-116076	internal_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTTTCTTATCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	124078000	124095000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_124078098_124081208_124081350_124083850_124083992_124094844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008486	chr14	+	462	4	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	183681	18976	183681	-18976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAACTGTTCTCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	124081293	124192100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_124081350_124083850_124083992_124094844_124094996_124191986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008487	chr14	+	537	4	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	197221	1432	197221	-1432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTATTGACCTACACTA	NA	NA	NA	NA	NA	NA	NA	NA	124094833	124209644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_124094996_124191986_124192100_124204042_124204190_124209529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008488	chr14	+	419	3	NIC	ENSMUSG00000032925.17	novel	1853	10	NA	NA	197222	-6885	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATCACTGTCAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	124094834	124204191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_124094992_124191986_124192100_124204042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008489	chr14	+	754	4	ISM	ENSMUSG00000032925.17	ENST00000376180.8	1881	11	294374	0	294374	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTGTTATGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	124191986	124211076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr14_+_124192100_124204042_124204190_124209529_124209644_124210696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008490	chr14	+	384	1	NIC	ENSMUSG00000032925.17	novel	4065	11	NA	NA	313080	0	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTGTTATGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	124210692	124211076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr14_+_124210700_124211100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008491	chr15	+	1589	4	FSM	ENSMUSG00000064373.14	ENST00000511224.5	1590	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTCTTACATTCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3304138	3309617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_3304363_3305048_3305262_3306638_3306757_3308583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008492	chr15	+	1957	4	ISM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	3740	-4	0	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTTTATTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	3304142	3309993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_3304359_3305048_3305262_3306638_3306757_3308583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008493	chr15	+	654	2	FSM	ENSMUSG00000064373.14	ENST00000507920.5	720	2	0	66	0	-66	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCATCCTTATGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	3304142	3309017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_3304363_3308583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008494	chr15	+	1412	1	Genic_Genomic	ENSMUSG00000064373.14	novel	NA	NA	NA	NA	4438	2	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTTATTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3308580	3309992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_3308600_3310000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008495	chr15	-	396	1	NIC	ENSMUSG00000091119.3	novel	1327	8	NA	NA	20445	1	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGCAGTACGCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	3310233	3309837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_3309800_3310200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008496	chr15	-	600	3	ISM	ENSMUSG00000091119.3	ENST00000388827.4	872	6	18249	7	18249	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGTCTTAAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3312429	3309845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_3310232_3310504_3310589_3312299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008497	chr15	-	389	4	ISM	ENSMUSG00000091119.3	ENST00000388827.4	872	6	2986	668	2986	-398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGCATTCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	3327692	3310506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_3310589_3312299_3312428_3323334_3323404_3327582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008498	chr15	-	1407	7	FSM	ENSMUSG00000022184.9	ENST00000281623.8	1407	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTAATTTCTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	4008908	3994935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007245_4007480_4008723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008499	chr15	-	389	4	FSM	ENSMUSG00000041935.11	ENST00000612065.1	388	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAATGTGAATTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	4025196	4013662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_4013698_4021199_4021347_4021839_4021947_4025096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008500	chr15	+	844	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	-1	-8	-1	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCCGTGTAGACTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	5146125	5148630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008501	chr15	+	832	4	NNC	ENSMUSG00000041841.9	novel	835	4	NA	NA	9	8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCCGTGTAGACTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	5146135	5148630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_5146167_5146768_5146903_5147100_5147186_5148048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008502	chr15	+	809	3	ISM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	629	-1	629	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCATAGTCCGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5146755	5148623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_5146905_5147100_5147186_5148048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008503	chr15	+	789	3	NNC	ENSMUSG00000041841.9	novel	835	4	NA	NA	643	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCATAGTCCGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5146769	5148623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_5146909_5147110_5147186_5148048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008504	chr15	+	769	3	NNC	ENSMUSG00000041841.9	novel	835	4	NA	NA	673	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCATAGTCCGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5146799	5148623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_5146909_5147100_5147186_5148048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008505	chr15	-	647	2	Antisense	novelGene_ENSMUSG00000077737.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAATAAAAAAAATAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	5148623	5147100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_-_5147171_5148046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008506	chr15	+	578	1	Genic_Genomic	ENSMUSG00000041841.9	novel	NA	NA	NA	NA	1919	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCATAGTCCGTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5148045	5148623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_5148000_5148600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008507	chr15	-	316	1	FSM	ENSMUSG00000068706.4	ENSMUST00000090488.4	482	1	243	-77	243	77	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCACCAAGCCTTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	5150374	5150058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_5150100_5150400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008508	chr15	+	791	5	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	12	8918	12	-8918	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCATTAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	5173190	5199497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_5173478_5190083_5190226_5194192_5194322_5198048_5198194_5199409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008509	chr15	+	683	5	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	16904	4549	16710	-4549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCAGGTGGATCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	5190082	5203866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_5190226_5194192_5194322_5198048_5198194_5199409_5199498_5203688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008510	chr15	+	1059	5	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	21031	1960	20837	-1960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGCAAGTGCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5194209	5206455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_5194322_5198048_5198194_5199409_5199498_5203688_5203914_5205966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008511	chr15	+	784	3	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	30566	1728	30372	-1728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTACACGCAGAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5203744	5206687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_5203914_5205966_5206454_5206559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008512	chr15	+	870	3	ISM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	32786	-7	32592	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTATTTCTTTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	5205964	5208422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_5206454_5206559_5206687_5208168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008513	chr15	+	157	1	ISM	ENSMUSG00000050697.10	ENSMUST00000051186.9	4655	9	37881	0	37851	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTATTTCTTATTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	5211223	5211380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_5211200_5211400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008514	chr15	+	980	2	ISM	ENSMUSG00000022151.17	ENSMUST00000081640.12	1583	4	26267	344	26267	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGATTCAAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	5241474	5247473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_5241612_5246630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008515	chr15	+	885	1	Genic_Genomic	ENSMUSG00000022151.17	novel	NA	NA	NA	NA	31726	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTCCTTTTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	5246933	5247818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_5246900_5247800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008516	chr15	+	280	1	FSM	ENSMUSG00000067547.7	ENSMUST00000146631.2	819	1	686	-147	686	147	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTATTCCAGAAAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	6684089	6684369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_6684100_6684400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008517	chr15	+	545	2	ISM	ENSMUSG00000050310.10	ENST00000296782.9	7369	39	75550	11695	75548	-11695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTCCTCAGCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	6813411	6816170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_6813643_6815856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008518	chr15	+	556	2	ISM	ENSMUSG00000050310.10	ENST00000296782.9	7369	39	87517	1804	87515	-1804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCGTTGTTTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	6825378	6826061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_6825516_6825642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008519	chr15	+	537	1	ISM	ENSMUSG00000050310.10	ENST00000296782.9	7369	39	89467	0	89465	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAAATTGTCTATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	6827328	6827865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_6827300_6827900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008520	chr15	-	651	4	FSM	ENSMUSG00000022146.13	ENST00000502536.5	654	4	8	-5	8	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGTGAAGTGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	6903909	6876507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_6876680_6881899_6882070_6889773_6889851_6903677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008521	chr15	-	505	2	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	42559	0	42559	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGGGGTAAATTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	7237099	7236543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7236751_7236801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008522	chr15	-	209	1	ISM	ENSMUSG00000042961.14	ENSMUST00000058593.10	4778	22	191033	943	42906	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGGGGTAAATTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	7236752	7236543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7236500_7236800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008523	chr15	-	323	2	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	41574	519	41574	-519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCTGCACTCAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	7238084	7237062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7237284_7237982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008524	chr15	-	332	3	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	30407	1441	30407	-1441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAAGTGACCTTGACCGA	NA	NA	NA	NA	NA	NA	NA	NA	7249251	7237984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7238087_7241611_7241696_7249105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008525	chr15	-	408	3	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	18405	12562	18405	-12562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTCATCTTGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	7261253	7249105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7249250_7252228_7252308_7261068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008526	chr15	-	334	3	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	15874	15730	15874	-15730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCGCAGCTACCTGACGT	NA	NA	NA	NA	NA	NA	NA	NA	7263784	7252273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7252308_7261068_7261250_7263665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008527	chr15	-	319	3	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	12326	24619	12326	-24619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGTGCCCATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7267332	7261162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7261250_7263665_7263783_7267217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008528	chr15	-	472	3	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	7533	27122	7533	-27122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTTTGCCTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	7272125	7263665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7263783_7267217_7267330_7271882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008529	chr15	-	442	3	ISM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	30	35385	30	-35385	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGAATTCCGCTTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	7279628	7271928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_7272127_7273263_7273390_7279510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008530	chr15	+	694	3	FSM	ENSMUSG00000022144.5	ENST00000381826.8	695	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGCTCCAGAGACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	7844120	7864314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_7844230_7845069_7845169_7863828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008531	chr15	+	488	1	NIC	ENSMUSG00000022144.5	novel	3674	3	NA	NA	19707	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGGCTCCAGAGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	7863825	7864313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_7863800_7864300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008532	chr15	+	623	1	FSM	ENSMUSG00000116090.2	ENSMUST00000229131.2	586	1	78	-115	78	115	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGCCACAGTCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	8004633	8005256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_8004600_8005300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008533	chr15	-	673	1	Genic_Genomic	ENSMUSG00000039828.8	novel	NA	NA	NA	NA	6294	2	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCATTATTCAGCAATACA	NA	NA	NA	NA	NA	NA	NA	NA	8122381	8121708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_8121700_8122400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008534	chr15	-	864	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	57	209	39	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTACGAGGACTAGATATT	NA	NA	NA	NA	NA	NA	NA	NA	8128636	8121919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008535	chr15	-	356	1	ISM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	153491	0	153491	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTGTTTCCATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	8320456	8320100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_8320100_8320500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008536	chr15	-	1133	1	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	75508	0	75153	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	8664740	8663607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_8663600_8664700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008537	chr15	-	1225	2	ISM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	71572	1128	71217	-1128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTCTCTTCAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	8668676	8664735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_8665824_8668539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008538	chr15	-	1547	1	ISM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	26833	0	26174	0	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGAGCTGCTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	9113619	9112072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_9112100_9113600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008539	chr15	-	609	4	FSM	ENSMUSG00000054115.13	ENST00000679015.1	984	4	3	372	3	55	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCTATTGGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	9140428	9113664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9140270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008540	chr15	-	235	1	ISM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	26499	1646	25840	1	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGGAACGAGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	9113953	9113718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_9113700_9114000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008541	chr15	-	420	4	FSM	ENSMUSG00000054115.13	ENST00000508514.5	671	4	39	212	39	-212	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGCTACAAGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	9139754	9113931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9139518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008542	chr15	+	602	6	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	3693	21261	3693	7697	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTGACATCCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	10377460	10388969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_10377585_10378883_10378979_10380688_10380783_10381419_10381514_10388272_10388374_10388875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008543	chr15	+	938	4	ISM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	15106	101	15106	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGGAAGCTGAGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	10388873	10410129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_10388969_10399099_10399250_10400532_10400632_10409535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008544	chr15	+	648	1	ISM	ENSMUSG00000089678.9	ENSMUST00000110542.8	2198	14	50961	8	35816	1	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGCTTACAACTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	10409583	10410231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_10409600_10410200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008545	chr15	-	1775	1	Genic_Genomic	ENSMUSG00000022247.13	novel	NA	NA	NA	NA	9400	6	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTTTTTTTTTTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	10476633	10474858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_10474900_10476600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008546	chr15	-	1956	3	ISM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	7175	95	7175	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTAGTATGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	10478858	10474959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_10476683_10476892_10477022_10478754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008547	chr15	+	1005	4	ISM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	1970	0	1919	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTACTGTCCTGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10488073	10493775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_10488185_10490341_10490601_10492850_10492950_10493239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008548	chr15	+	1206	3	ISM	ENSMUSG00000058914.13	ENSMUST00000110523.2	2088	6	19623	216	19623	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCTGTGGTAGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10972065	10979576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_10972197_10975676_10975777_10978601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008549	chr15	+	1017	1	ISM	ENSMUSG00000058914.13	ENSMUST00000022853.15	2338	6	26802	0	26777	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTATTTAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	10979219	10980236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_10979200_10980200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008550	chr15	+	2580	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCACCAATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	10981838	10996712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008551	chr15	-	371	1	Genic_Genomic	ENSMUSG00000022205.16	novel	NA	NA	NA	NA	14352	3	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGTTATCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	11981792	11981421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_11981400_11981800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008552	chr15	-	571	3	ISM	ENSMUSG00000022205.16	ENSMUST00000110504.2	675	5	5899	-79	4974	79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATCAAAAAAACCTAG	NA	NA	NA	NA	NA	NA	NA	NA	11991170	11984047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_11984384_11986541_11986651_11991044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008553	chr15	-	383	4	ISM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	32	5115	32	-2413	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTTATTTCTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	11996112	11986539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_11986651_11991044_11991168_11993874_11993948_11996036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008554	chr15	+	481	1	FSM	ENSMUSG00000115017.2	ENSMUST00000228426.2	318	1	-6	-157	-6	157	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCCTGCTTCTGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	12181226	12181707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_12181200_12181700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008555	chr15	+	214	2	ISM	ENSMUSG00000039458.16	ENST00000264934.5	2118	14	25202	37236	25187	-37236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAACTGCATTTGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	12230357	12232992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_12230421_12232841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008556	chr15	+	223	2	ISM	ENSMUSG00000039458.16	ENST00000264934.5	2118	14	27686	36216	27671	-36216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCTCCTTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	12232841	12234012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_12232992_12233939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008557	chr15	+	244	3	ISM	ENSMUSG00000039458.16	ENST00000264934.5	2118	14	30986	25099	30971	-25099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCGGACCAAGGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	12236141	12245129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_12236235_12238014_12238106_12245069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008558	chr15	+	353	2	ISM	ENSMUSG00000039458.16	ENST00000264934.5	2118	14	58688	428	58673	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGAGGGGCCGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	12263843	12269800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_12263984_12269587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008559	chr15	+	234	1	ISM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	64881	4354	64824	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAGCCCAGTGGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	12269994	12270228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_12270000_12270200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008560	chr15	+	1262	2	ISM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	21585	753	21400	-753	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGGTGCCCCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	12343120	12350598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_12343238_12349453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008561	chr15	+	1523	1	Genic_Genomic	ENSMUSG00000022200.9	novel	NA	NA	NA	NA	28436	2	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTATTTTATGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	12350156	12351679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_12350200_12351700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008562	chr15	+	1289	1	FSM	ENSMUSG00000078300.4	ENSMUST00000100754.5	1002	1	-77	-210	-77	210	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCAGAGACTGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	12574897	12576186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_12574900_12576200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008563	chr15	+	607	1	FSM	ENSMUSG00000115193.2	ENSMUST00000227365.2	608	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCCAATAAATACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	23489977	23490584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_23490000_23490600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008564	chr15	+	791	3	ISM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	26691	32166	26691	-32166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCGACGACTCATCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	25779686	25781591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_25779897_25780449_25780499_25781059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008565	chr15	+	383	2	ISM	ENSMUSG00000022270.17	ENST00000682229.1	3188	10	6	84065	6	-82748	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATATGCGACTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	25843424	25889675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_25843699_25889566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008566	chr15	+	323	3	ISM	ENSMUSG00000022270.17	ENST00000682229.1	3188	10	90036	6954	-7333	-5637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCTACCTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	25933454	25966786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_25933583_25964309_25964437_25966718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008567	chr15	+	1719	5	FSM	ENSMUSG00000022270.17	ENST00000684456.1	1504	5	52	-267	52	267	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTGAAAAGAGGTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	25941112	25972810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_25941330_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008568	chr15	+	314	3	ISM	ENSMUSG00000022270.17	ENSMUST00000228306.2	1430	7	21555	3819	21555	-3819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACCAGAAGAAACGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	25964319	25968604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_25964437_25966718_25966804_25968492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008569	chr15	+	1245	1	ISM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	129263	0	29764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	25972528	25973773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_25972500_25973800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008570	chr15	+	1225	3	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	6	11157	6	-11157	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGAGTTTGTGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	25984457	25987410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_25985270_25986883_25987133_25987246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008571	chr15	+	1283	4	ISM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	2801	446	2801	-446	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGCTTAATGAAACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	25987252	25998121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_25987410_25991538_25991652_25996191_25996336_25997252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008572	chr15	+	882	1	Genic_Genomic	ENSMUSG00000052253.7	novel	NA	NA	NA	NA	13238	4	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCTAGGTTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	25997689	25998571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_25997700_25998600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008573	chr15	+	2231	5	ISM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	104908	-1	104908	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTATTTTCATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	27571670	27594996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008574	chr15	+	1808	1	NIC	ENSMUSG00000022265.8	novel	3498	12	NA	NA	126425	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	27593187	27594995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_27593200_27595000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008575	chr15	-	940	3	ISM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	19055	0	19055	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTTTGTATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	27611724	27606004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_27606548_27608677_27608948_27611597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008576	chr15	-	422	1	ISM	ENSMUSG00000022263.11	ENSMUST00000090247.7	11495	57	294776	0	16418	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTGTTAGGCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	27731158	27730736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_27730700_27731200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008577	chr15	-	443	2	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	13846	2075	13846	-2075	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGCCAGAAGGCCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	27733730	27732812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_27733117_27733591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008578	chr15	-	743	3	ISM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	152	11730	152	-11730	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTGAAGGTGAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	27747424	27742467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_27742597_27744038_27744287_27747058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008579	chr15	+	1095	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	2	458	2	339	multi-exon	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACCTCCAGCCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	31224461	31274029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008580	chr15	+	752	1	Genic_Genomic	ENSMUSG00000039168.16	novel	NA	NA	NA	NA	5255	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTCTTACGGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	31273736	31274488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_31273700_31274500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008581	chr15	-	666	1	NIC	ENSMUSG00000022237.18	novel	7466	4	NA	NA	69318	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGCGCAGCGTCCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	31298131	31297465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_31297500_31298100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008582	chr15	-	1075	3	FSM	ENSMUSG00000022237.18	ENST00000529293.1	1117	3	32	10	32	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAGCCAGAGCGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	31367417	31297476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_31298131_31325173_31325362_31367184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008583	chr15	-	1640	2	FSM	ENSMUSG00000022237.18	ENSMUST00000076942.5	1641	2	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGTGCGCCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	31367712	31324090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_31325203_31367184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008584	chr15	-	511	3	ISM	ENSMUSG00000022236.11	ENSMUST00000110408.3	957	5	4609	0	4609	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTTTTTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	31449274	31441356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_31441527_31443437_31443614_31449109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008585	chr15	+	967	5	ISM	ENSMUSG00000022235.16	ENSMUST00000070918.14	1155	6	13092	-4	13092	4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTAGCTTCACTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	31582035	31590269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_31582220_31584110_31584219_31585440_31585584_31588313_31588406_31589829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008586	chr15	-	429	2	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	9345	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGATAGAGGATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	31592605	31590941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_31591202_31592436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008587	chr15	-	766	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	8749	-2	8749	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCTTGATAGAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	31593201	31590943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008588	chr15	-	258	1	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	10747	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGCTTGATAGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	31591203	31590945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_31590900_31591200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008589	chr15	-	445	3	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	8754	-1536	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTAACCCTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	31593196	31592481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_31592612_31592791_31592923_31593012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008590	chr15	-	522	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	8166	1592	8166	-1592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTGGCATGAATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	31593784	31592537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_31592612_31592791_31592930_31593012_31593199_31593660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008591	chr15	-	545	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	7556	1897	7556	-1897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCAGCCGAAATATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	31594394	31592842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_31592930_31593012_31593199_31593660_31593781_31594242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008592	chr15	-	575	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	7274	2145	7274	-2145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAAAATGCTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	31594676	31593090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_31593199_31593660_31593781_31594242_31594393_31594479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008593	chr15	-	300	3	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	7432	-2718	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAGGAGGCCAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	31594518	31593663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_31593781_31594242_31594383_31594475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008594	chr15	-	596	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	5959	2783	5959	-2783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATCACTTACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31595991	31593728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_31593781_31594242_31594393_31594479_31594673_31595790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008595	chr15	-	559	3	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	4227	3534	4227	-3534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCGAGTGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	31597723	31594479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_31594673_31595790_31595990_31597556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008596	chr15	-	553	3	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	4231	-3534	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCGAGTGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	31597719	31594479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_31594673_31595792_31595990_31597556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008597	chr15	-	631	4	ISM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	-1	4844	-1	-4844	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCCTATCAGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	31601951	31595789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_31595990_31597556_31597722_31598145_31598207_31601746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008598	chr15	+	2114	4	ISM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	3803	82	3803	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAATAGAAGCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31606066	31618673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_31606335_31608241_31608380_31609711_31609763_31617016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008599	chr15	+	1729	1	Genic_Genomic	ENSMUSG00000039065.12	novel	NA	NA	NA	NA	14764	1	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCTGGCCTCGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	31617027	31618756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_31617000_31618800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008600	chr15	-	230	1	ISM	ENSMUSG00000096956.3	ENSMUST00000181536.3	1486	2	3868	0	3868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTTTGGCTCATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32240940	32240710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_32240700_32240900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008601	chr15	-	351	2	FSM	ENSMUSG00000096956.3	ENSMUST00000181536.3	1486	2	74	1061	74	-1061	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATTATTACAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	32244734	32241771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_32241916_32244527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008602	chr15	+	750	3	ISM	ENSMUSG00000115317.2	ENSMUST00000147013.3	1334	4	407	303	407	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCATGAGCAAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	32779456	32795849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_32779577_32793709_32793757_32795266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008603	chr15	+	643	1	ISM	ENSMUSG00000115317.2	ENSMUST00000147013.3	1334	4	16460	0	16460	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGTCAGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	32795509	32796152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_32795500_32796200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008604	chr15	+	3524	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGTGTGAGTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	32920871	33035081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008605	chr15	+	1146	4	FSM	ENSMUSG00000022261.7	ENST00000518385.5	1143	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAATTAATGTGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	32921379	33033319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_32921456_33023794_33023932_33028192_33028329_33032522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008606	chr15	+	1135	4	NIC	ENSMUSG00000022261.7	novel	3527	5	NA	NA	7	3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAATTAATGTGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	32921386	33033319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_32921452_33023794_33023932_33028192_33028329_33032522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008607	chr15	+	575	3	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	-100	27274	-100	-27274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGCAGTGCAAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	34083120	34114203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34083560_34099629_34099732_34114169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008608	chr15	+	456	3	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	31722	23241	31722	-23241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTTTCTGGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	34114942	34118236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34115122_34116456_34116523_34118025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008609	chr15	+	420	3	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	33240	10041	33240	-10041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTTGTTAAAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	34116460	34131436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34116523_34118025_34118257_34131309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008610	chr15	+	362	3	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	34908	6932	34908	-6932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTACCTGAACAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	34118128	34134545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34118257_34131309_34131435_34134436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008611	chr15	+	505	4	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	48115	1434	48115	-1434	internal_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGCTTTGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34131335	34140043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34131435_34134436_34134545_34136832_34136974_34139886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008612	chr15	+	707	3	ISM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	53622	221	53622	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGGCTGCCGTGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	34136842	34141256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34136974_34139886_34140044_34140837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008613	chr15	+	339	1	ISM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	58274	4293	57918	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTTAAAAGTTCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	34141138	34141477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34141100_34141500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008614	chr15	+	436	1	ISM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	62470	0	62114	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCTGGCTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34145334	34145770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34145300_34145800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008615	chr15	+	1902	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	34238173	34284448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008616	chr15	+	937	3	ISM	ENSMUSG00000022324.16	ENST00000521689.5	3132	18	2	88168	2	-2431	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTTGCCATCGGTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	34306699	34345563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34307045_34316636_34316802_34345136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008617	chr15	+	322	3	FSM	ENSMUSG00000022324.16	ENSMUST00000226766.2	3252	3	140	2790	135	-2790	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACTATGCAAAGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	34306965	34345204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_34307055_34316636_34316802_34345136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008618	chr15	+	623	3	ISM	ENSMUSG00000022324.16	ENST00000524308.5	3056	16	183	57466	183	30918	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATGTACAGGTAGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	34345318	34378912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34345707_34355708_34355832_34378800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008619	chr15	+	875	1	ISM	ENSMUSG00000022324.16	ENSMUST00000226766.2	3252	3	40294	0	1984	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTTGTCAGCTTCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	34347119	34347994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34347100_34348000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008620	chr15	+	436	4	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	23071	33342	23071	-26145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTACTGCCGCTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	34378800	34403043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34378928_34388869_34388993_34399195_34399319_34402980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008621	chr15	+	441	4	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	33138	26417	33138	-19220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGTGCTCAGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	34388867	34409968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34388993_34399195_34399319_34402980_34403104_34409898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008622	chr15	+	415	4	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	43466	26080	43466	-18883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTCAACACAGACAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	34399195	34410305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34399319_34402980_34403104_34409898_34410022_34410259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008623	chr15	+	375	3	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	54164	13774	54164	-6577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTACTAGAGCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	34409893	34422611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34410022_34410259_34410383_34422487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008624	chr15	+	333	3	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	54536	12453	54536	-5256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGCTGAGGATGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34410265	34423932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34410383_34422487_34422611_34423839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008625	chr15	+	656	3	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	68110	7396	68110	-199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGTAAAATGGGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34423839	34428989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34423963_34426308_34426432_34428579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008626	chr15	+	624	3	ISM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	72865	3488	72865	-834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCTTAAAAGGCACTA	NA	NA	NA	NA	NA	NA	NA	NA	34428594	34432897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34428994_34431617_34431771_34432825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008627	chr15	-	294	2	Antisense	novelGene_ENSMUSG00000022324.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGAAAAGAGTTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	34436065	34433623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_-_34433730_34435877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008628	chr15	+	315	1	ISM	ENSMUSG00000022324.16	ENSMUST00000022947.7	3551	19	129247	31	80344	3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTTGAGTAAAATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34436073	34436388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34436100_34436400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008629	chr15	-	575	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	2	-7	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTTTGCTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	34443366	34440648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008630	chr15	-	412	3	FSM	ENSMUSG00000058600.14	ENSMUST00000142643.2	505	3	12	81	12	-76	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATGCCAGAACAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	34443042	34440731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_34440751_34441377_34441509_34442780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008631	chr15	-	488	3	ISM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	173	2124	173	-2119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAACCTGGATGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	34443613	34442774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_34442927_34443170_34443224_34443330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008632	chr15	-	295	3	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	-115	-2176	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGCAAAGCGAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	34443483	34442831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_34442927_34443170_34443224_34443336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008633	chr15	-	187	1	ISM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	11048	0	11048	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTAATTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	34484353	34484166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_34484200_34484400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008634	chr15	-	181	2	ISM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	9627	363	9627	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGTTGAAGTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	34485774	34484529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_34484682_34485745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008635	chr15	-	106	2	ISM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	8575	1599	8575	-1599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCGCTGCTTTACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	34486826	34485765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_34485802_34486756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008636	chr15	-	234	3	ISM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	6572	2590	6572	-2590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGATTTGACCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	34488829	34486756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_34486826_34487887_34487943_34488719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008637	chr15	-	250	2	ISM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	60	4552	60	-4552	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTGCACATGAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	34495341	34488718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_34488826_34495198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008638	chr15	+	379	3	ISM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	20547	4376	20547	-4376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGTTCTGTTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	34516015	34526407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_34516104_34517972_34518165_34526308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008639	chr15	-	1646	3	ISM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	196797	-1	196741	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTTGTTGTTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34959155	34875640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_34876967_34945151_34945328_34959011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008640	chr15	-	587	1	ISM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	279724	0	279668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	34876228	34875641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_34875600_34876200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008641	chr15	-	267	2	ISM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	2218	-6	2218	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTGGTTATTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	35935573	35932119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_35932244_35935430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008642	chr15	-	736	3	FSM	ENSMUSG00000014313.16	ENSMUST00000153512.2	738	3	6	-4	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	35937785	35932121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_35932244_35935430_35935560_35937300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008643	chr15	-	125	1	NIC	ENSMUSG00000014313.16	novel	503	4	NA	NA	5545	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	35932246	35932121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_35932100_35932200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008644	chr15	-	404	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	0	99	0	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTCATTGCTGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35938392	35932220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008645	chr15	+	257	2	Antisense	novelGene_ENSMUSG00000014313.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCGAGTAAAACAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	35935430	35937432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_+_35935567_35937311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008646	chr15	+	250	2	Antisense	novelGene_ENSMUSG00000014313.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCGAGTAAAACAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	35935441	35937432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_+_35935567_35937307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008647	chr15	+	601	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTATTCAATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36174178	36177156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008648	chr15	+	466	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	26	-3	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTATTCAATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36174181	36177156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008649	chr15	-	948	1	FSM	ENSMUSG00000098457.3	ENSMUST00000185150.3	119	1	-716	-113	-716	113	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGTGCCCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	36241026	36240078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_36240100_36241000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008650	chr15	-	1407	1	Genic_Genomic	ENSMUSG00000048307.9	novel	NA	NA	NA	NA	7045	1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCGGCCATTTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	36479219	36477812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_36477800_36479200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008651	chr15	-	1935	4	ISM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	855	452	855	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGGTTCTCTTTTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	36496111	36478265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008652	chr15	-	563	2	FSM	ENSMUSG00000048307.9	ENST00000519316.5	561	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGTCAGTGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36486265	36479381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_36479620_36485940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008653	chr15	-	238	1	NIC	ENSMUSG00000048307.9	novel	2509	5	NA	NA	6644	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTGTCAGTGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	36479620	36479382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_36479400_36479600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008654	chr15	-	456	1	Genic_Genomic	ENSMUSG00000022283.16	novel	NA	NA	NA	NA	12086	1	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTTGATTCTCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	36596343	36595887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_36595900_36596300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008655	chr15	-	921	5	ISM	ENSMUSG00000022283.16	ENST00000677765.1	2230	15	10057	-1	10057	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTTGATTCTCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	36598372	36595887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008656	chr15	+	535	2	Antisense	novelGene_ENSMUSG00000022283.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTCATCAACCTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	36595887	36596887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_+_36596346_36596810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008657	chr15	-	668	6	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	9462	0	9141	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCTCCCTCGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	36599288	36596806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008658	chr15	-	788	6	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	9025	463	8704	-463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGATTGATAACTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	36599725	36597269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008659	chr15	-	220	2	ISM	ENSMUSG00000022283.16	ENST00000519100.6	2201	14	9522	2242	9138	-1441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCACAGCCACAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	36599291	36598247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36598372_36599195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008660	chr15	-	666	5	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	7811	1477	7490	-1477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTGCGGGAGTCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	36600939	36598283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008661	chr15	-	601	4	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	7496	2389	7175	-2389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTCATTTAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36601254	36599195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36599287_36599448_36599722_36600836_36600933_36601113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008662	chr15	-	744	5	ISM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	5519	2642	5198	-2642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTGTGAAGAAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	36603231	36599448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008663	chr15	-	784	6	ISM	ENSMUSG00000022283.16	ENST00000677765.1	2230	15	2247	4944	2247	-4026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCACTATACTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	36606182	36600832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008664	chr15	-	581	5	NNC	ENSMUSG00000022283.16	novel	2201	14	NA	NA	2634	-4026	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCACTATACTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	36605795	36600832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008665	chr15	-	284	3	NNC	ENSMUSG00000022283.16	novel	2201	14	NA	NA	5284	-4307	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATATTTACTCGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	36603145	36601113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_36601252_36601558_36601654_36603094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008666	chr15	-	300	3	ISM	ENSMUSG00000022283.16	ENST00000677140.1	2420	15	5604	5269	5220	-4351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATTTGAGCAGATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	36603209	36601157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36601252_36601558_36601654_36603098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008667	chr15	-	276	3	ISM	ENSMUSG00000022283.16	ENST00000677140.1	2420	15	3080	5668	2696	-4750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACTTAAATCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36605733	36601556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36601654_36603098_36603230_36605685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008668	chr15	-	864	4	ISM	ENSMUSG00000022283.16	ENST00000519100.6	2201	14	-205	7131	199	-6330	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGACATGGATGATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	36609018	36603136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36603230_36605685_36605802_36605987_36606182_36608557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008669	chr15	-	600	3	ISM	ENSMUSG00000022283.16	ENST00000520804.2	2689	16	34	10175	34	-9257	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGGACAAATCCATCG	NA	NA	NA	NA	NA	NA	NA	NA	36609800	36606063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36606182_36608557_36609018_36609778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008670	chr15	-	1592	1	Genic_Genomic	ENSMUSG00000022285.18	novel	NA	NA	NA	NA	21483	7	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTGGTGAGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	36772598	36771006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_36771000_36772600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008671	chr15	-	2051	5	ISM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	2845	-284	2845	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTAACTTAGGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	36791236	36771663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008672	chr15	-	809	4	ISM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	14	3841	14	-3841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTTGAAATCAGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	36794067	36775788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_36775824_36776489_36776614_36790927_36791233_36793722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008673	chr15	-	637	2	NNC	ENSMUSG00000022285.18	novel	2122	6	NA	NA	17	-18981	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGAAAGAGTCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	36794064	36790928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_36791224_36793722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008674	chr15	-	3902	1	Genic_Genomic	ENSMUSG00000062397.9	novel	NA	NA	NA	NA	2897	2	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTGTGGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	37001170	36997268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_36997300_37001200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008675	chr15	-	4035	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	6	376	6	-376	multi-exon	TRUE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAATGGTTCTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	37007640	36997646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008676	chr15	-	3519	3	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	47	-572	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGAGGCTGCTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	37004020	36997842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_37001168_37002082_37002191_37003934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008677	chr15	-	622	2	FSM	ENSMUSG00000062397.9	ENST00000519744.5	622	2	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTTAAAGAATGGCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	37004066	37000682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_37001168_37003929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008678	chr15	-	673	5	FSM	ENSMUSG00000062397.9	ENST00000521272.5	669	5	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAAACAATAAAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	37007613	37001085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37006915_37007020_37007371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008679	chr15	-	430	1	ISM	ENSMUSG00000051359.16	ENSMUST00000168992.8	3538	7	423754	1642	29206	807	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTGGAGGACACGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	37368490	37368060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_37368100_37368500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008680	chr15	-	976	3	ISM	ENSMUSG00000051359.16	ENST00000395923.5	1618	4	-3	2181	-3	169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTACCCTGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	37397699	37368698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_37369170_37372359_37372466_37397300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008681	chr15	-	474	3	NNC	ENSMUSG00000051359.16	novel	3295	4	NA	NA	170	-154	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAACTTACTTCGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37397526	37369021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_37369170_37372359_37372466_37397306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008682	chr15	-	206	2	FSM	ENSMUSG00000022292.17	ENST00000519962.5	201	2	-2	-3	-2	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTCCTCATTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37961137	37927485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_37927642_37961087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008683	chr15	-	161	1	NIC	ENSMUSG00000022292.17	novel	4561	9	NA	NA	33488	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCCTCATTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37927647	37927486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_37927500_37927600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008684	chr15	-	175	2	NNC	ENSMUSG00000022292.17	novel	201	2	NA	NA	18	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTCCTCATTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37961117	37927487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_37927633_37961087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008685	chr15	-	193	2	NNC	ENSMUSG00000022292.17	novel	201	2	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTCCTCATTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37961131	37927487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_37927642_37961092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008686	chr15	-	358	1	FSM	ENSMUSG00000085442.2	ENSMUST00000148102.2	466	1	199	-91	199	91	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCATGGAAGGAGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	37943837	37943479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_37943500_37943800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008687	chr15	-	545	1	FSM	ENSMUSG00000115437.2	ENSMUST00000228508.2	1042	1	500	-3	500	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTTCTCCATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	38276185	38275640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_38275600_38276200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008688	chr15	-	1038	1	ISM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	5256	0	3632	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	38295694	38294656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_38294700_38295700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008689	chr15	-	1979	2	ISM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	1555	683	1555	-683	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATGTCAAGAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	38297771	38295342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_38296409_38296858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008690	chr15	-	2098	1	ISM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	28978	764	28975	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGATTTTGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	38490532	38488434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_38488400_38490500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008691	chr15	-	2314	3	NNC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	25625	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTGTAATCTCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	38493882	38488611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_38490641_38492483_38492604_38493717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008692	chr15	-	2182	4	ISM	ENSMUSG00000037458.16	ENST00000683787.1	4228	13	25715	470	25686	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCATCTAGTTGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	38493821	38488966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008693	chr15	+	2492	3	FSM	ENSMUSG00000022296.11	ENSMUST00000163313.3	2492	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGGTTACAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	38796538	38814659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_38796717_38797304_38797472_38812512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008694	chr15	+	851	3	ISM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	3550	88	3526	-88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCTATAACATATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	38943876	38950428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_38944100_38947660_38947878_38950017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008695	chr15	+	933	2	ISM	ENSMUSG00000022307.17	ENSMUST00000230778.2	2818	9	27699	6445	-13852	-6445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGGAGATGCAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41680475	41683980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_41680663_41683234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008696	chr15	+	1059	3	ISM	ENSMUSG00000022307.17	ENST00000442977.6	2768	15	166372	33446	-11093	-994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAGGGAGTGGGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	41683234	41689431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_41683979_41686722_41686892_41689285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008697	chr15	+	1465	1	ISM	ENSMUSG00000022307.17	ENSMUST00000110297.10	4599	17	412102	0	28652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	41722979	41724444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_41723000_41724400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008698	chr15	+	1129	2	FSM	ENSMUSG00000115988.2	ENSMUST00000230284.2	1108	2	-1	-20	-1	20	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAATTTTACTGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	42060178	42064718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_42060411_42063821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008699	chr15	-	2541	2	ISM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	238570	0	238570	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCATAAGATTACATT	NA	NA	NA	NA	NA	NA	NA	NA	42301803	42288118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_42290527_42301670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008700	chr15	-	1018	1	FSM	ENSMUSG00000098002.2	ENSMUST00000182757.2	1012	1	-2	-4	-2	4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATACCATCCACTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	43081559	43080541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_43080500_43081600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008701	chr15	-	531	4	ISM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	21549	-2	21528	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTGCTTGAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	43124566	43113451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008702	chr15	-	377	4	ISM	ENSMUSG00000022336.4	ENST00000677272.1	1210	11	19996	76	19996	-76	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTTCTTTTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	43126098	43114950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43115011_43115600_43115704_43124455_43124566_43125994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008703	chr15	-	416	4	ISM	ENSMUSG00000022336.4	ENST00000677272.1	1210	11	19362	753	19362	-753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGCCAAGATTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	43126732	43115627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43115704_43124455_43124566_43125994_43126097_43126604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008704	chr15	-	418	4	ISM	ENSMUSG00000022336.4	ENST00000677272.1	1210	11	17073	9627	17073	7333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTGAGACGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	43129021	43124501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43124566_43125994_43126097_43126604_43126732_43128896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008705	chr15	-	380	3	ISM	ENSMUSG00000022336.4	ENST00000677272.1	1210	11	16438	11729	16438	5231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATAAACTTAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43129656	43126603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43126732_43128896_43129022_43129529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008706	chr15	-	404	4	ISM	ENSMUSG00000022336.4	ENST00000677272.1	1210	11	10378	14019	10378	2941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACATCATTGTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	43135716	43128893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43129022_43129529_43129656_43134274_43134380_43135671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008707	chr15	-	393	4	ISM	ENSMUSG00000022336.4	ENST00000677272.1	1210	11	7343	14655	7343	2305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTACATGTTTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	43138751	43129529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43129656_43134274_43134380_43135671_43135715_43138632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008708	chr15	-	618	1	Genic_Genomic	ENSMUSG00000022336.4	novel	NA	NA	NA	NA	13643	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTTAAAGACTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	43132451	43131833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_43131800_43132500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008709	chr15	-	754	2	ISM	ENSMUSG00000022336.4	ENST00000676487.1	2160	6	37614	963	11714	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCCGGTTATTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	43134380	43132797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43133368_43134196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008710	chr15	-	385	4	ISM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	4295	20819	4274	-2438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTACCTGTTTGTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	43141820	43134272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43134380_43135671_43135715_43138632_43138751_43141703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008711	chr15	-	351	3	ISM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	1	25177	1	-6796	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCTAATTTGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	43146114	43138630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_43138751_43141703_43141819_43145998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008712	chr15	+	811	6	ISM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	30416	0	30416	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAAAATTCTAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	43371040	43391159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008713	chr15	-	449	1	ISM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	54262	0	54262	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCTTGTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44237007	44236558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_44236600_44237000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008714	chr15	-	882	3	ISM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	39712	21	39278	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTTATCATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	44251991	44239487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_44240083_44243455_44243616_44251864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008715	chr15	+	2996	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	4	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCTCATTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	44291510	44301652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008716	chr15	+	204	3	ISM	ENSMUSG00000022338.9	ENST00000520147.5	827	5	7	3539	7	-3359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTTTCACTTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	44291514	44295904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_44291571_44292955_44293033_44295833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008717	chr15	+	255	2	ISM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	4345	1786	4325	-1786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGGACTGGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	44295832	44297477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_44295905_44297294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008718	chr15	+	376	2	ISM	ENSMUSG00000022338.9	ENST00000520147.5	827	5	5784	243	5784	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATACATTGTATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44297291	44299200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_44297475_44299007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008719	chr15	-	198	2	Antisense	novelGene_ENSMUSG00000022338.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTACCTCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44299114	44297379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_-_44297480_44299016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008720	chr15	+	440	1	NIC	ENSMUSG00000022338.9	novel	3000	5	NA	NA	7497	1	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTGATAACTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	44299004	44299444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_44299000_44299400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008721	chr15	+	570	2	ISM	ENSMUSG00000022339.10	ENSMUST00000022964.9	1613	7	17222	198	17222	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTTTCCATGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	44500208	44504224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_44500252_44503697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008722	chr15	+	535	1	ISM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	21523	283	21107	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCAGTTTTCATTGATT	NA	NA	NA	NA	NA	NA	NA	NA	44504093	44504628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_44504100_44504600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008723	chr15	-	1619	1	Genic_Genomic	ENSMUSG00000022340.16	novel	NA	NA	NA	NA	33058	1	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTCCTATAATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	44536868	44535249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_44535200_44536900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008724	chr15	-	2225	5	ISM	ENSMUSG00000022340.16	ENST00000399066.7	3298	6	28111	222	-12453	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTTGATAAAGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44582379	44535472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546843_44582179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008725	chr15	-	634	4	ISM	ENSMUSG00000022340.16	ENST00000399066.7	3298	6	632	5768	632	-5319	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATCCACCCTAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	44609858	44541018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_44541135_44546743_44546843_44582179_44582382_44609641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008726	chr15	-	472	3	ISM	ENSMUSG00000022340.16	ENST00000408908.6	2973	8	46	74397	-19	14723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGGTACACTAAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	44615653	44609647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_44609859_44611704_44611795_44615482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008727	chr15	-	153	2	ISM	ENSMUSG00000022340.16	ENST00000446070.6	2905	8	3837	74545	-2	14575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGGCCCCATCGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44611797	44609795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_44609856_44611704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008728	chr15	-	188	2	ISM	ENSMUSG00000022340.16	ENST00000533895.5	3013	9	2876	76468	-690	12652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGAGAGAGCAAGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	44612758	44611718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_44611795_44612646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008729	chr15	-	1096	7	ISM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	22898	2	22898	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTGTGTATTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	51706021	51649955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008730	chr15	+	343	2	FSM	ENSMUSG00000022313.11	ENST00000517820.1	336	2	-5	-2	-5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCACCAGAATTGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51740908	51828445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_51741111_51828304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008731	chr15	+	336	2	NIC	ENSMUSG00000022313.11	novel	336	2	NA	NA	0	4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACCAGAATTGAGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	51740913	51828447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_51741107_51828304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008732	chr15	-	313	2	Genic_Genomic	ENSMUSG00000022314.11	novel	3956	14	NA	NA	26699	84699	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGGTGATCTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	51828444	51740936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_51741113_51828307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008733	chr15	-	296	2	Genic_Genomic	ENSMUSG00000022314.11	novel	3956	14	NA	NA	26700	84678	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTTCTTGGCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	51828443	51740957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_51741113_51828302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008734	chr15	+	2000	2	ISM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	3585	641	0	-641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGGTCATAAACTCGT	NA	NA	NA	NA	NA	NA	NA	NA	51744409	51747369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_51744587_51745546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008735	chr15	+	275	2	FSM	ENSMUSG00000022313.11	ENST00000520733.5	325	2	58	-8	58	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTGAGAAAAAACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	51744467	51828451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_51744615_51828323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008736	chr15	+	1874	1	Genic_Genomic	ENSMUSG00000022313.11	novel	NA	NA	NA	NA	1728	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTTAATAATAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	51746137	51748011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_51746100_51748000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008737	chr15	-	1055	1	Genic_Genomic	ENSMUSG00000022314.11	novel	NA	NA	NA	NA	28457	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGACCCGGGAAGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	51826686	51825631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_51825600_51826700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008738	chr15	+	140	1	NIC	ENSMUSG00000022313.11	novel	336	2	NA	NA	83894	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCACCAGAATTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	51828303	51828443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_51828300_51828400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008739	chr15	+	647	1	FSM	ENSMUSG00000115457.2	ENSMUST00000227885.2	646	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAATAGTTCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	51952703	51953350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_51952700_51953400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008740	chr15	-	566	1	FSM	ENSMUSG00000057262.3	ENSMUST00000081993.3	612	1	42	4	42	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTAATACCATGATATTT	NA	NA	NA	NA	NA	NA	NA	NA	52341582	52341016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_52341000_52341600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008741	chr15	+	1011	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTTTACTTTCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	52575837	52593964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008742	chr15	+	311	3	FSM	ENSMUSG00000038622.9	ENST00000522839.1	435	3	125	-1	125	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATATTTAAATCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52576027	52593559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_52576083_52582741_52582901_52593462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008743	chr15	+	779	4	FSM	ENSMUSG00000024479.4	ENST00000531508.1	770	4	0	-9	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTCTGATGTTAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54435384	54464302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_54435601_54451709_54451881_54461806_54461963_54464066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008744	chr15	+	734	4	NNC	ENSMUSG00000024479.4	novel	770	4	NA	NA	11	-29	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAAGCTGTGGTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	54435395	54464264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_54435601_54451709_54451881_54461806_54461967_54464066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008745	chr15	+	497	2	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	3060	1133	3060	-1133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTTTTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54612684	54616025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_54612761_54615604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008746	chr15	+	834	2	ISM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	6240	407	6240	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTGATGATTTTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	54615864	54616751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_54616316_54616368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008747	chr15	+	502	1	ISM	ENSMUSG00000037362.9	ENSMUST00000050027.9	2869	5	7559	277	7032	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACATCAATCATTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	54616656	54617158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_54616700_54617200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008748	chr15	-	671	4	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	26112	-5	26112	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGACATATTAAGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	54710710	54702617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_54702933_54707774_54707932_54709208_54709342_54710644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008749	chr15	-	312	1	NIC	ENSMUSG00000022425.17	novel	3095	25	NA	NA	33889	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATCTGACATATTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	54702933	54702621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_54702600_54702900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008750	chr15	-	444	4	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	25112	5216	25112	-5077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCCTCTCTCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54711710	54707838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_54707932_54709208_54709342_54710644_54710723_54711570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008751	chr15	-	422	4	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	23363	6584	23363	-6445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTTTTCCCCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	54713459	54709206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_54709342_54710644_54710723_54711570_54711707_54713386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008752	chr15	-	438	4	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	7412	23297	7412	-23158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGATGATAAGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54729410	54725919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_54726079_54727133_54727222_54727379_54727468_54729307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008753	chr15	+	549	1	ISM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	146406	0	125287	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGCTGACTTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	55122118	55122667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_55122100_55122700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008754	chr15	+	351	1	ISM	ENSMUSG00000086541.9	ENSMUST00000163314.2	633	3	83774	37	12268	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTGTCATCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	56641123	56641474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_56641100_56641500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008755	chr15	-	607	1	Genic_Genomic	ENSMUSG00000022365.7	novel	NA	NA	NA	NA	22194	7	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTATGTGAGTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57733497	57732890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_57732900_57733500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008756	chr15	-	746	3	ISM	ENSMUSG00000022365.7	ENST00000419562.6	903	4	14983	-154	14823	147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTCACACATGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	57740868	57734722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_57735303_57738892_57739004_57740813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008757	chr15	-	327	1	ISM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	20646	1974	20493	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGGCAGGAGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	57735198	57734871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_57734900_57735200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008758	chr15	-	424	3	ISM	ENSMUSG00000022365.7	ENST00000419562.6	903	4	33	4036	26	-4036	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCACACCTCAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57755818	57738912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_57739004_57740813_57740867_57755538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008759	chr15	+	382	2	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	40445	10287	14706	-10287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGGTGTGGTCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	57816149	57817030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_57816385_57816883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008760	chr15	+	379	3	ISM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	51686	95	25837	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGTCTATAAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	57827280	57833362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_57827321_57831304_57831401_57833119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008761	chr15	+	340	1	Genic_Genomic	ENSMUSG00000022364.15	novel	NA	NA	NA	NA	31676	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCTGAACTGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57833119	57833459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_57833100_57833500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008762	chr15	+	960	3	FSM	ENSMUSG00000051225.10	ENST00000522648.5	960	3	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCACAACCAGAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57849363	57873206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_57849938_57858609_57858735_57872945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008763	chr15	-	870	3	ISM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	5270	0	5270	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTCAGCTGCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57892441	57885654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_57885960_57888669_57888803_57892009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008764	chr15	-	307	1	NIC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	11750	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTCAGCTGCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57885961	57885654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_57885700_57886000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008765	chr15	-	585	2	ISM	ENSMUSG00000022362.14	ENSMUST00000176935.8	1326	4	45316	370	45074	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGGGGAACACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	57894505	57892008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_57892441_57894352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008766	chr15	-	758	4	ISM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	4	6496	4	-6496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCTTGCCTGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	57897707	57892150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_57892441_57894352_57894497_57895379_57895476_57897479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008767	chr15	+	853	4	FSM	ENSMUSG00000022359.11	ENST00000518125.1	830	4	-1	-22	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCCTTTTTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	58014012	58022066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_58014053_58016975_58017101_58021297_58021563_58021643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008768	chr15	+	547	4	ISM	ENSMUSG00000022359.11	ENST00000287387.7	1113	6	4339	339	2054	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCTTTTGTAAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	58016067	58021726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_58016142_58016975_58017101_58021297_58021563_58021643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008769	chr15	+	788	3	NNC	ENSMUSG00000022359.11	novel	830	4	NA	NA	2961	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTGCTTTTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58016974	58022046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_58017101_58021297_58021563_58021649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008770	chr15	+	423	1	Genic_Genomic	ENSMUSG00000022359.11	novel	NA	NA	NA	NA	7630	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCCTTTTTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	58021643	58022066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_58021600_58022100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008771	chr15	-	1690	1	ISM	ENSMUSG00000022358.8	ENSMUST00000022986.8	6976	9	37364	0	37059	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTGTATTTTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	58040964	58039274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_58039300_58041000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008772	chr15	+	578	1	ISM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	41695	0	41695	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTGGAGAGTGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	58329011	58329589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_58329000_58329600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008773	chr15	-	2895	3	ISM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	34098	0	34098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCTTCTGTATCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	58661281	58654117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_58656860_58658958_58659065_58661234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008774	chr15	+	278	1	FSM	ENSMUSG00000037085.9	ENSMUST00000036937.9	4454	1	4176	0	4176	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTATTGGAAGACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	58748698	58748976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_58748700_58749000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008775	chr15	+	1219	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	111	3018	111	-3018	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATACATGGCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	58761188	58771221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_58761344_58770157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008776	chr15	-	297	3	ISM	ENSMUSG00000050891.11	ENST00000630259.1	752	9	22938	-2	22937	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCCTTTTTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	58777661	58772821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_58772920_58776582_58776710_58777589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008777	chr15	+	1054	1	Genic_Genomic	ENSMUSG00000037075.8	novel	NA	NA	NA	NA	12109	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGTATTGTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	58773186	58774240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_58773200_58774200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008778	chr15	-	324	5	ISM	ENSMUSG00000050891.11	ENST00000517678.5	661	8	7380	4864	7380	-4864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGGATTTAATGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	58793218	58781440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008779	chr15	+	707	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTGAAGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58805604	58811340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008780	chr15	+	449	3	NNC	ENSMUSG00000022354.5	novel	704	4	NA	NA	2536	-41	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCACGCTCACACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	58808140	58811296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_58808310_58809207_58809315_58811123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008781	chr15	+	430	3	NNC	ENSMUSG00000022354.5	novel	704	4	NA	NA	2600	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTGCCTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58808204	58811337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_58808314_58809207_58809315_58811123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008782	chr15	-	1443	1	ISM	ENSMUSG00000022353.11	ENSMUST00000080371.8	4938	15	139313	0	13916	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGGTCTCCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	58814525	58813082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_58813100_58814500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008783	chr15	-	1860	5	ISM	ENSMUSG00000022353.11	ENST00000431961.6	1677	7	3021	-491	3021	491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGCTGGGGGAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	58825420	58814674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_58815980_58817210_58817374_58817694_58817818_58823318_58823530_58825362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008784	chr15	-	828	1	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	12449	1	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGAATCCTGCTCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58815992	58815164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_58815200_58816000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008785	chr15	-	853	2	NNC	ENSMUSG00000022353.11	novel	1677	7	NA	NA	11186	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGAATCCTGCTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	58817255	58815165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_58815974_58817210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008786	chr15	+	935	3	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	522	9698	522	-9698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACCACAGCTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	59187477	59193343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_59187979_59189644_59189898_59193162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008787	chr15	+	515	3	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	2687	8278	2687	-8278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACTGGGGACACCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	59189642	59194763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_59189898_59193162_59193344_59194684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008788	chr15	+	502	4	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	6205	7278	6205	-7278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGGAGAATTGCCAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	59193160	59195763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_59193344_59194684_59194782_59195462_59195577_59195655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008789	chr15	+	774	4	ISM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	10951	-1	10951	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	59197906	59203042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_59198027_59198418_59198516_59201588_59201677_59202573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008790	chr15	+	469	1	Genic_Genomic	ENSMUSG00000022351.15	novel	NA	NA	NA	NA	15618	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTGGTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	59202573	59203042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_59202600_59203000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008791	chr15	+	988	6	ISM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	4579	-1	4579	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCATGGTCCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	59250714	59473534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008792	chr15	+	1114	1	Genic_Genomic	ENSMUSG00000059586.11	novel	NA	NA	NA	NA	164266	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTTCTTATTTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	59410401	59411515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_59410400_59411500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008793	chr15	+	2271	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	26	41	26	-41	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTTTTTCTATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	61857265	61862158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_61857801_61859355_61860128_61861194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008794	chr15	+	2149	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	37	0	-21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTCTTTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	61857449	61862223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_61857801_61859358_61860128_61861194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008795	chr15	-	1366	2	Antisense	novelGene_ENSMUSG00000022346.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCTCGTCGCAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	61861891	61859457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_-_61860125_61861192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008796	chr15	+	1016	1	NIC	ENSMUSG00000022346.18	novel	2186	3	NA	NA	1923	10	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGGGCCAACTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	61861193	61862209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_61861200_61862200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008797	chr15	-	886	1	Genic_Genomic	ENSMUSG00000022378.15	novel	NA	NA	NA	NA	67988	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTCATTTGTATATATA	NA	NA	NA	NA	NA	NA	NA	NA	63801830	63800944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_63800900_63801800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008798	chr15	-	436	1	Genic_Genomic	ENSMUSG00000022377.17	novel	NA	NA	NA	NA	225350	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACATCAGGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	63959138	63958702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_63958700_63959100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008799	chr15	-	623	2	ISM	ENSMUSG00000022377.17	ENST00000357668.2	5412	32	294158	292	223993	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCCAAGAAGGGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	63960495	63958997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63959154_63960028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008800	chr15	-	1676	3	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	218143	-79	218143	79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGTCTAAGGGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	63966345	63960305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63961371_63963896_63964020_63965857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008801	chr15	-	711	1	ISM	ENSMUSG00000022377.17	ENST00000518721.6	5316	31	293569	1684	223390	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTGTTTCTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	63961098	63960387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63960400_63961100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008802	chr15	-	300	2	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	213047	5734	213047	-4823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTACCTCCCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	63971441	63966118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63966358_63971380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008803	chr15	-	406	2	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	192451	22366	192451	-21455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCTAAAGTCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	63992037	63982750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63982926_63991806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008804	chr15	-	357	3	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	188930	31440	188930	-30529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGAACGCCGGGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	63995558	63991824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63992036_63993856_63993965_63995520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008805	chr15	-	383	3	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	187735	35335	187735	-34424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGTAAGTGTGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	63996753	63995719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63995830_63996163_63996250_63996566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008806	chr15	-	281	2	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	185175	36181	185175	-35270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGACTCAGAGAAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	63999313	63996565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63996754_63999220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008807	chr15	-	350	3	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	182413	38835	182413	-37924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATTTTGAATTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	64002075	63999219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_63999313_64001019_64001154_64001952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008808	chr15	-	279	3	ISM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	174620	41568	174620	-40657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCGCCCTGGGCACACT	NA	NA	NA	NA	NA	NA	NA	NA	64009868	64001952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_64002117_64007654_64007704_64009802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008809	chr15	+	672	2	ISM	ENSMUSG00000015002.19	ENSMUST00000211878.2	2541	23	57050	-530	57050	530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTAGTCCCACCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	65739132	65743637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_65739169_65743001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008810	chr15	+	659	1	Genic_Genomic	ENSMUSG00000015002.19	novel	NA	NA	NA	NA	62927	3	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCATTTTTATTATAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	65745009	65745668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_65745000_65745700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008811	chr15	-	232	1	FSM	ENSMUSG00000092454.2	ENSMUST00000173338.2	480	1	459	-211	459	211	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTATTAATCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	65800323	65800091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_65800100_65800300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008812	chr15	-	744	1	ISM	ENSMUSG00000056258.10	ENSMUST00000070256.9	11824	15	291569	7943	36397	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTTCTGCATTACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	65866922	65866178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65866200_65866900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008813	chr15	-	736	2	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	33683	363	33683	-363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCCAGTGGTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	65869636	65867105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65867755_65869549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008814	chr15	-	235	2	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	29141	5122	29141	-5122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTTGTGTTTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	65874178	65871864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65871965_65874043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008815	chr15	-	150	2	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	26644	7388	26644	-7388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCCTTATGATGTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	65876675	65874130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65874176_65876570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008816	chr15	-	220	2	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	25538	9872	25538	-9872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACATGATCCCTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	65877781	65876614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65876674_65877620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008817	chr15	-	279	2	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	11087	10928	11087	-10928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCACCGCCTTCCGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	65892232	65877670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65877824_65892106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008818	chr15	-	209	2	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	9634	25375	9634	-25375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTCAGAGTATATGTG	NA	NA	NA	NA	NA	NA	NA	NA	65893685	65892117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65892231_65893589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008819	chr15	-	354	3	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	6201	26856	6201	-26856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATCCAGGTCTGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	65897118	65893598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65893686_65895495_65895607_65896962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008820	chr15	-	455	3	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	826	30220	826	-30220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCACCTTCCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	65902493	65896962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65897119_65900473_65900647_65902367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008821	chr15	-	191	2	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	27	35625	27	-35625	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCCTGAGAATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	65903292	65902367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_65902495_65903228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008822	chr15	-	643	4	ISM	ENSMUSG00000036944.7	ENST00000523829.5	769	6	4107	-6	4107	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTCTTGGTTTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	66427095	66410646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_66410722_66413421_66413604_66423780_66423951_66426879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008823	chr15	-	416	3	NNC	ENSMUSG00000036944.7	novel	769	6	NA	NA	7250	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTATTCTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66423952	66410651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_66410722_66413421_66413596_66423780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008824	chr15	-	428	3	NIC	ENSMUSG00000036944.7	novel	769	6	NA	NA	7250	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTATTCTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66423952	66410651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_66410722_66413421_66413608_66423780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008825	chr15	-	437	3	NIC	ENSMUSG00000036944.7	novel	769	6	NA	NA	4237	-2774	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGAGTCCTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	66426965	66413426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_66413608_66423780_66423951_66426879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008826	chr15	-	484	4	ISM	ENSMUSG00000036944.7	ENST00000523829.5	769	6	1543	2916	1543	-2916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGCCAGTCACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	66429659	66413568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_66413604_66423780_66423951_66426879_66427093_66429593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008827	chr15	-	523	4	ISM	ENSMUSG00000036944.7	ENST00000377901.8	587	5	6	13117	6	-13117	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTCATTCCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	66431196	66423769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_66423951_66426879_66427093_66429593_66429655_66431128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008828	chr15	+	1740	5	ISM	ENSMUSG00000072501.6	ENST00000337920.8	2281	8	17520	0	15079	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATGTCAATCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	66466996	66482633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008829	chr15	+	1260	1	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	29456	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAATGTCAATCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	66481373	66482633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_66481400_66482600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008830	chr15	+	753	5	ISM	ENSMUSG00000072501.6	ENST00000395390.6	5108	19	43922	11142	43922	-11142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGACTGCCTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	66495839	66504751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008831	chr15	+	825	2	ISM	ENSMUSG00000072501.6	ENST00000395390.6	5108	19	59874	1555	59874	-1555	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGAAGTCTCACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	66511791	66514338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66511925_66513646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008832	chr15	+	759	1	ISM	ENSMUSG00000072501.6	ENSMUST00000048188.10	6665	21	65707	1210	63218	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCGTTCAGAACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	66515135	66515894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66515100_66515900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008833	chr15	+	539	1	ISM	ENSMUSG00000072501.6	ENSMUST00000048188.10	6665	21	67137	0	64648	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTTTGTTTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	66516565	66517104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66516600_66517100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008834	chr15	-	549	4	FSM	ENSMUSG00000022372.15	ENST00000517648.5	546	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGACCTGGCTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	66664160	66654394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_66654605_66655457_66655606_66661530_66661635_66664073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008835	chr15	-	453	3	NNC	ENSMUSG00000022372.15	novel	546	4	NA	NA	2525	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAATGACCTGGCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	66661635	66654396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_66654605_66655465_66655606_66661530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008836	chr15	+	1501	4	NIC	ENSMUSG00000005124.11	novel	1199	5	NA	NA	0	563	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCTATTGAAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	66763317	66791867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_66763484_66778249_66778530_66789128_66789320_66791003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008837	chr15	+	442	2	FSM	ENSMUSG00000005124.11	ENST00000519433.1	442	2	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGTGGCTCAGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	66763343	66791305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_66763484_66791003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008838	chr15	+	413	2	NNC	ENSMUSG00000005124.11	novel	442	2	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGTGGCTCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	66763367	66791304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_66763484_66791007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008839	chr15	+	856	4	FSM	ENSMUSG00000005124.11	ENST00000220856.6	851	4	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCTCAGGGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	66763406	66791308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_66763484_66778249_66778530_66789125_66789320_66791003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008840	chr15	+	1348	4	NNC	ENSMUSG00000005124.11	novel	851	4	NA	NA	0	501	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATCTGTATATCACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	66763407	66791805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_66763484_66778249_66778530_66789125_66789320_66791007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008841	chr15	+	787	3	ISM	ENSMUSG00000005124.11	ENST00000220856.6	851	4	14831	-1	14831	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGTGGCTCAGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	66778238	66791305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66778530_66789125_66789320_66791003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008842	chr15	+	777	3	NNC	ENSMUSG00000005124.11	novel	1199	5	NA	NA	14832	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGTGTGGCTCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	66778239	66791303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_66778530_66789128_66789320_66791007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008843	chr15	+	772	3	NNC	ENSMUSG00000005124.11	novel	851	4	NA	NA	14836	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGTGGCTCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	66778243	66791304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_66778530_66789134_66789320_66791003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008844	chr15	+	734	3	ISM	ENSMUSG00000005124.11	ENST00000250160.11	1199	5	14931	1984	14841	-1984	internal_fragment	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCAGGGCAGGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	66778248	66789320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66778530_66784677_66784939_66789128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008845	chr15	+	1022	3	ISM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	21510	3479	21271	267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCCTGGGCAAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	66784678	66791571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66784939_66789125_66789320_66791003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008846	chr15	+	411	3	ISM	ENSMUSG00000005124.11	ENST00000250160.11	1199	5	21558	144	21468	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGTGTCCAGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66784875	66791160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66784939_66789128_66789320_66791003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008847	chr15	+	311	1	NIC	ENSMUSG00000005124.11	novel	5097	5	NA	NA	27586	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGTGGCTCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	66790993	66791304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_66791000_66791300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008848	chr15	+	924	1	ISM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	30958	0	30719	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGATTTGGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	66794126	66795050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_66794100_66795000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008849	chr15	-	3762	2	ISM	ENSMUSG00000013846.11	ENSMUST00000092640.6	4985	6	5718	260	5718	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTGCTTCCGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	66980123	66974983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_66978680_66980057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008850	chr15	+	490	1	FSM	ENSMUSG00000068397.5	ENSMUST00000089785.5	483	1	48	-55	48	55	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTTCATAATTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	68181715	68182205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_68181700_68182200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008851	chr15	+	628	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTGAACTATTATATACA	NA	NA	NA	NA	NA	NA	NA	NA	71666989	71667617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr15_+_71667000_71667600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008852	chr15	+	446	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	20	405	20	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCACATGCAAGGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	72962260	72965519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_72962433_72964681_72964809_72965372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008853	chr15	+	188	1	Genic_Genomic	ENSMUSG00000068391.9	novel	NA	NA	NA	NA	3498	2	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTCATTGAAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	72965738	72965926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_72965700_72965900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008854	chr15	-	445	1	ISM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	78079	10568	77963	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCCCTGCAGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	72978705	72978260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72978300_72978700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008855	chr15	-	781	3	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	72994	163	72994	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGTCATCCAATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	72983674	72978423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72978866_72979013_72979214_72983535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008856	chr15	-	527	3	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	70920	753	70920	-753	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCGCACCTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	72985748	72979013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72979214_72983535_72983671_72985556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008857	chr15	-	547	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	65330	5302	65330	-5302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTCTGCACAGACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72991338	72983562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72983671_72985556_72985752_72988151_72988243_72991185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008858	chr15	-	461	3	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	61371	12935	61371	-12935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGGCAGGTGAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	72995297	72991195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72991346_72992912_72993098_72995171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008859	chr15	-	444	3	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	60819	14651	60819	-14651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTTGGCCCCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	72995849	72992911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72993098_72995171_72995306_72995725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008860	chr15	-	456	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	59579	16909	59579	-16909	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCTTGAGGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72997089	72995169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72995306_72995725_72995849_72995978_72996099_72997012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008861	chr15	-	429	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	57730	17781	57730	-17781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCATGATCAGAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	72998938	72996041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72996099_72997012_72997161_72998295_72998384_72998802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008862	chr15	-	511	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	56357	18751	56357	-18751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTCTGCACTATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	73000311	72997011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72997161_72998295_72998384_72998802_72998938_73000172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008863	chr15	-	507	4	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	46776	20540	46776	-20540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTACCCAGCACGTC	NA	NA	NA	NA	NA	NA	NA	NA	73009892	72998800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_72998938_73000172_73000310_73002709_73002892_73009841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008864	chr15	-	429	3	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	38315	24458	38315	-24458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGAGGTGAGGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	73018353	73002718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_73002892_73009841_73009963_73018218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008865	chr15	-	991	1	ISM	ENSMUSG00000022607.19	ENSMUST00000226988.3	4675	34	217036	0	137269	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73077941	73076950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_73077000_73077900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008866	chr15	+	1319	5	FSM	ENSMUSG00000059895.14	ENST00000520105.5	1324	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73596629	73628773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73628645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008867	chr15	+	800	5	ISM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	3322	1801	-45	41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATGTGCGTCCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	73623544	73628814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008868	chr15	+	452	3	FSM	ENSMUSG00000059895.14	ENST00000524028.1	456	3	5	-1	5	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTACCTCATTACATC	NA	NA	NA	NA	NA	NA	NA	NA	73623594	73628774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_73623877_73627910_73627952_73628645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008869	chr15	+	432	2	NNC	ENSMUSG00000059895.14	novel	456	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73623594	73628773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_73623899_73628645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008870	chr15	+	356	3	NNC	ENSMUSG00000059895.14	novel	456	3	NA	NA	98	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73623687	73628773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_73623877_73627912_73627952_73628645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008871	chr15	-	2885	1	ISM	ENSMUSG00000022594.15	ENSMUST00000023259.15	4023	4	2310	0	2310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTTTCTCTCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74622585	74619700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_74619700_74622600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008872	chr15	-	166	1	ISM	ENSMUSG00000101026.2	ENSMUST00000191407.2	1494	2	6561	1224	3155	1	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTGCCTAGTGAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	74644147	74643981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_74644000_74644100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008873	chr15	-	223	2	FSM	ENSMUSG00000101026.2	ENST00000637396.2	291	2	0	68	0	-68	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCTGACCGGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	74647302	74644050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_74644179_74647207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008874	chr15	-	771	5	ISM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	2594	0	2594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAATTTTTGGTGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	74725491	74722810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_74723002_74723543_74723623_74723854_74724022_74724887_74725043_74725312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008875	chr15	-	855	5	ISM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	64	2123	64	-2075	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAAGCGAACTCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	74728021	74724933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_74725043_74725312_74725517_74725644_74725845_74727278_74727435_74727835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008876	chr15	+	521	3	ISM	ENSMUSG00000022587.15	ENSMUST00000188866.7	2068	5	20	2022	0	-846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTCTGAGATAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	74826919	74829730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_74827185_74827415_74827567_74829625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008877	chr15	+	2242	4	FSM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	26	13	-9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCACCACCACACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	74826945	74831741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008878	chr15	+	234	2	ISM	ENSMUSG00000022587.15	ENSMUST00000188042.2	714	4	1209	438	1209	-339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTAGCTGCCTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	74829612	74830237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_74829727_74830117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008879	chr15	+	1416	1	Genic_Genomic	ENSMUSG00000022587.15	novel	NA	NA	NA	NA	1937	2	mono-exon	FALSE	NA	NA	NA	NA	NA	672	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCCTTAGACTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	74830340	74831756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_74830300_74831800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008880	chr15	-	612	1	Genic_Genomic	ENSMUSG00000075602.11	novel	NA	NA	NA	NA	2147	1	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTCTCCATTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74867336	74866724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_74866700_74867300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008881	chr15	-	850	4	FSM	ENSMUSG00000075602.11	ENSMUST00000186526.7	862	4	34	-22	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTTCTCCATTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74869743	74866725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008882	chr15	-	270	3	ISM	ENSMUSG00000075602.11	ENSMUST00000189068.7	878	4	5	1575	5	-1501	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTCTTTGTGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	74869751	74868300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_74868418_74869383_74869482_74869696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008883	chr15	-	603	1	NIC	ENSMUSG00000079018.11	novel	784	6	NA	NA	3175	2	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTTCTTATGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	74917462	74916859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_74916900_74917500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008884	chr15	-	798	3	ISM	ENSMUSG00000079018.11	ENSMUST00000179762.8	838	4	289	-4	264	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTTTCTTATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	74920373	74916861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_74917460_74919201_74919319_74920290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008885	chr15	-	212	2	ISM	ENSMUSG00000022584.15	ENSMUST00000188214.7	638	3	1068	328	1068	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGCAGCGAAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	74982478	74980507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_74980601_74982359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008886	chr15	+	1057	2	ISM	ENSMUSG00000047728.14	ENSMUST00000055719.8	1470	4	4159	3	4159	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTGCTTGAATAACT	NA	NA	NA	NA	NA	NA	NA	NA	75092603	75094507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_75092640_75093486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008887	chr15	+	1006	1	ISM	ENSMUSG00000047728.14	ENSMUST00000229521.2	1498	5	5278	0	5060	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTGAATAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	75093504	75094510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_75093500_75094500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008888	chr15	-	728	3	NNC	ENSMUSG00000022577.18	novel	797	4	NA	NA	314	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGGGACTGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	75438118	75436713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_75437187_75437431_75437549_75437980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008889	chr15	-	793	4	NNC	ENSMUSG00000022577.18	novel	797	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGGGACTGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	75438432	75436713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_75437187_75437431_75437549_75437980_75438109_75438357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008890	chr15	-	802	4	FSM	ENSMUSG00000022577.18	ENST00000430474.6	797	4	-5	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGGGACTGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	75438437	75436713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_75437191_75437431_75437549_75437980_75438109_75438357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008891	chr15	-	734	3	ISM	ENSMUSG00000022577.18	ENST00000430474.6	797	4	312	0	312	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGGGACTGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	75438120	75436713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75437191_75437431_75437549_75437980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008892	chr15	+	2043	2	ISM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	2149	571	2144	-571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAATGCTTGCACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	75490676	75496578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_75491541_75495399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008893	chr15	-	157	1	NIC	ENSMUSG00000022574.8	novel	1898	13	NA	NA	3064	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGGTCCCCTGTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75763019	75762862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_75762900_75763000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008894	chr15	-	323	3	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	2361	214	2361	-214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGACTCTACCTGCAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	75763722	75763220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75763351_75763428_75763532_75763632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008895	chr15	-	238	3	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	2187	453	2187	-453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGCCTTCCGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	75763896	75763459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75763532_75763632_75763714_75763811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008896	chr15	-	293	3	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	1748	644	1748	-644	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCTGTGTCTACAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	75764335	75763650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75763714_75763811_75763897_75764190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008897	chr15	-	319	2	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	1497	1187	1497	-1187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGAGTTTCCCATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	75764586	75764193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75764332_75764405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008898	chr15	-	257	2	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	1013	1456	1013	-1456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGCCTTTCCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	75765070	75764462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75764603_75764953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008899	chr15	-	249	2	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	796	1947	796	-1947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTACTGTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	75765287	75764953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75765070_75765154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008900	chr15	-	311	3	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	413	2153	413	-2153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGAGGCCTGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75765670	75765159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75765286_75765401_75765485_75765568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008901	chr15	-	266	2	ISM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	70	2572	70	-2572	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTGGTGTGAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75766013	75765578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75765697_75765865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008902	chr15	-	557	1	ISM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	14594	0	14509	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCTGCTCACCGACC	NA	NA	NA	NA	NA	NA	NA	NA	75766610	75766053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75766100_75766600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008903	chr15	-	801	1	NIC	ENSMUSG00000055762.17	novel	2312	8	NA	NA	13676	6	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGCCTCTGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	75767443	75766642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_75766600_75767400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008904	chr15	-	1292	4	ISM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	12593	19	12529	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATCCTTGTCAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	75768590	75766667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008905	chr15	-	620	4	ISM	ENSMUSG00000055762.17	ENST00000419152.7	1067	8	12351	232	12351	-232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGCATGGGCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	75768768	75767578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75767776_75768091_75768314_75768488_75768590_75768668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008906	chr15	-	498	4	ISM	ENSMUSG00000055762.17	ENST00000419152.7	1067	8	8505	745	8505	-745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCGTGTAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	75772614	75768091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75768314_75768488_75768590_75768668_75768769_75772539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008907	chr15	-	322	3	ISM	ENSMUSG00000055762.17	ENSMUST00000116440.9	896	7	8045	1152	8018	-1142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTTCCCGCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	75773101	75768488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75768590_75768668_75768769_75772980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008908	chr15	-	622	2	ISM	ENSMUSG00000055762.17	ENSMUST00000089681.12	2152	10	6160	5641	6095	-5633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGACTATACTCGGAACG	NA	NA	NA	NA	NA	NA	NA	NA	75775024	75772979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75773105_75774527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008909	chr15	-	1338	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75793408	75788325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008910	chr15	-	627	5	ISM	ENSMUSG00000022570.8	ENSMUST00000229951.2	1405	11	3537	0	3537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75798038	75796524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008911	chr15	-	323	1	NIC	ENSMUSG00000022570.8	novel	1405	11	NA	NA	4728	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75796847	75796524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_75796500_75796800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008912	chr15	-	459	4	ISM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	1210	1634	1183	-1634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCATCCGGCACACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75800392	75798165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75798307_75798647_75798722_75798815_75798945_75800277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008913	chr15	-	466	4	ISM	ENSMUSG00000022570.8	ENSMUST00000230736.2	1319	11	-4	2291	-4	-2284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCGTGGGGCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75801631	75798815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75798945_75800277_75800393_75800740_75800899_75801567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008914	chr15	+	1096	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	81	1309	81	-1309	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAAACTCATTCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	75812881	75819940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_75813009_75818971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008915	chr15	+	1078	1	Genic_Genomic	ENSMUSG00000050846.10	novel	NA	NA	NA	NA	7373	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTAATTGGCATATC	NA	NA	NA	NA	NA	NA	NA	NA	75820173	75821251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_75820200_75821300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008916	chr15	+	740	3	FSM	ENSMUSG00000034429.16	ENSMUST00000229652.2	2204	3	767	697	767	-697	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCAAGGCCTTTCGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	75844999	75846886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_75845058_75845390_75845505_75846318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008917	chr15	+	739	1	Genic_Genomic	ENSMUSG00000034429.16	novel	NA	NA	NA	NA	2629	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGTTCTTCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	75846861	75847600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_75846900_75847600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008918	chr15	-	2440	2	NNC	ENSMUSG00000098176.3	novel	2458	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGTTGTCTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75854278	75851720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_75853528_75853645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008919	chr15	-	2425	2	NNC	ENSMUSG00000098176.3	novel	2458	2	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGTTGTCTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75854254	75851720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_75853537_75853645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008920	chr15	-	212	1	ISM	ENSMUSG00000022568.18	ENSMUST00000002603.12	5599	38	22383	2	22023	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTGTCCTTTTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75919220	75919008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75919000_75919200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008921	chr15	-	268	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	21682	202	21682	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCCAGCTTCATCACC	NA	NA	NA	NA	NA	NA	NA	NA	75919561	75919210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75919387_75919469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008922	chr15	-	207	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	21046	471	21046	-471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTGGTGAGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	75920197	75919479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75919560_75920070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008923	chr15	-	211	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	20829	1118	20829	-1118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGGCTGAGGCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75920414	75920126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75920214_75920290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008924	chr15	-	198	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	20535	1414	20535	-1414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCTGAGCGACGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	75920708	75920422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75920471_75920558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008925	chr15	-	213	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	17551	4241	17551	-4241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGCATGCCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	75923692	75923249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75923326_75923555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008926	chr15	-	207	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	10339	10864	10339	-10864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGGCCTGGCAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	75930904	75929872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75929986_75930810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008927	chr15	-	234	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	10020	11903	10020	-11903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTACCGTGAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	75931223	75930911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75931069_75931146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008928	chr15	-	244	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	8748	12483	8748	-12483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGCGGGGAGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	75932495	75931491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75931656_75932415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008929	chr15	-	366	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	5637	15689	5637	-15689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGACAGGGAGGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	75935606	75934697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75934897_75935439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008930	chr15	-	220	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	4822	16473	4822	-16473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCTGCACAGGAGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	75936421	75935481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75935605_75936324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008931	chr15	-	261	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	4352	17540	4352	-17540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTATGAAGGGGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	75936891	75936548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75936677_75936758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008932	chr15	-	232	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	4154	17776	4154	-17776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGCAGCCCCTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	75937089	75936784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75936926_75936998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008933	chr15	-	260	2	ISM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	24	20501	24	-20501	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGGGGGAGGGCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	75941219	75939509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75939628_75941077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008934	chr15	-	398	1	ISM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	10334	0	10311	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGTGTCTGAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	75942428	75942030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75942000_75942400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008935	chr15	-	1219	5	ISM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	8955	0	8933	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75943806	75942038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008936	chr15	-	439	3	ISM	ENSMUSG00000002524.18	ENST00000527197.5	1559	10	8563	1199	8563	-1199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTCCCGCCTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75944176	75943375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75943506_75943588_75943803_75944081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008937	chr15	-	470	3	ISM	ENSMUSG00000002524.18	ENST00000527197.5	1559	10	8321	1412	8321	-1412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTGGGAAGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	75944418	75943588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75943803_75944081_75944175_75944255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008938	chr15	-	400	4	ISM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	5280	2049	5257	-1903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACAAGAAAGTTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	75947482	75944079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75944175_75944255_75944418_75946455_75946507_75947390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008939	chr15	-	321	4	ISM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	3211	4443	3188	-4297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCACCTTTGCAATCGGT	NA	NA	NA	NA	NA	NA	NA	NA	75949551	75946473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_75946507_75947390_75947481_75947585_75947682_75949449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008940	chr15	-	4216	2	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	14764	5622	14764	-5622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCCAGGCTGACTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	76065146	76060797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76062586_76062718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008941	chr15	-	194	2	NNC	ENSMUSG00000022565.16	novel	14917	32	NA	NA	10042	-14384	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAAGCTGGAACAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76069868	76069559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_76069690_76069804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008942	chr15	-	168	2	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	5123	19181	5123	-19181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGGGCTGTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	76074787	76074356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76074396_76074658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008943	chr15	-	213	2	NNC	ENSMUSG00000022565.16	novel	14917	32	NA	NA	2442	-21204	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTGTGGCATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76077468	76076379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_76076541_76077416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008944	chr15	+	1600	6	ISM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	1075	0	1075	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGCTTCTCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	76132049	76134104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008945	chr15	+	1800	3	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTAATGTCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76211597	76214878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76211868_76213229_76213437_76213555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008946	chr15	+	1479	3	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	195	-120	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAGATGACATTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	76211791	76214757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76211868_76213229_76213431_76213555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008947	chr15	+	1326	1	Genic_Genomic	ENSMUSG00000034259.9	novel	NA	NA	NA	NA	1956	1	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTAATGTCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76213552	76214878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_76213600_76214900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008948	chr15	+	1508	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCATGGTGTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76227734	76230460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008949	chr15	+	742	4	ISM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	7	1359	-5	-1358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATGAACAGAAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	76235500	76237214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008950	chr15	+	771	4	ISM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	13	1359	-8	-1358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATGAACAGAAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	76235518	76237214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008951	chr15	+	837	5	ISM	ENSMUSG00000022553.17	ENST00000534585.5	1724	7	24	1114	24	-1113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTCACGTCTTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76235568	76237459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76235860_76236623_76236753_76236845_76236975_76237046_76237213_76237337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008952	chr15	+	822	5	ISM	ENSMUSG00000022553.17	ENST00000534585.5	1724	7	1141	651	1141	-650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTGGCTGTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	76236685	76237922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76236753_76236845_76236975_76237046_76237213_76237337_76237661_76237785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008953	chr15	+	514	4	ISM	ENSMUSG00000022553.17	ENSMUST00000160172.8	1537	7	1342	920	1324	-912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTACTTTGCCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	76236868	76237660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76236975_76237046_76237213_76237337_76237460_76237540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008954	chr15	+	1123	4	ISM	ENSMUSG00000022553.17	ENST00000534585.5	1724	7	1532	-2	1532	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACCTGGGAGTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	76237076	76238575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76237213_76237337_76237661_76237785_76237921_76238046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008955	chr15	+	770	5	ISM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	1601	240	1562	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAGACAGGACAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	76237106	76238333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008956	chr15	+	433	3	NNC	ENSMUSG00000022553.17	novel	1724	7	NA	NA	2041	-307	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTGTGGCTGGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	76237585	76238265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76237665_76237785_76237921_76238046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008957	chr15	+	673	2	ISM	ENSMUSG00000022553.17	ENST00000534585.5	1724	7	2232	-2	2232	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAACCTGGGAGTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	76237776	76238575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76237921_76238046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008958	chr15	+	457	1	ISM	ENSMUSG00000022553.17	ENSMUST00000160172.8	1537	7	2597	0	2579	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGAGTTTGTGGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	76238123	76238580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76238100_76238600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008959	chr15	+	1910	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	83	0	83	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACTCTCCTGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76253180	76255637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008960	chr15	-	495	2	NNC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	23705	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGCAGCAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	76337772	76337187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_76337579_76337668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008961	chr15	-	586	3	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	23547	-1	23547	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGCAGCAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	76337930	76337187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76337579_76337662_76337771_76337843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008962	chr15	-	663	4	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	22919	474	22919	-474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGCTGGCCCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	76338558	76337662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76337771_76337843_76337929_76338016_76338306_76338377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008963	chr15	-	633	4	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	22533	869	22533	-869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCAAGTGGGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	76338944	76338057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76338306_76338377_76338559_76338651_76338785_76338873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008964	chr15	-	508	4	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21877	1683	21877	-1683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGAGGTGGGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	76339600	76338871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76338944_76339017_76339099_76339169_76339332_76339407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008965	chr15	-	567	4	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21499	1988	21499	-1988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGGGTACGTGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	76339978	76339176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76339332_76339407_76339621_76339695_76339798_76339881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008966	chr15	-	571	4	ISM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	21268	2219	21268	-2219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCCTGCGCTGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	76340209	76339407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76339621_76339695_76339798_76339881_76340000_76340071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008967	chr15	+	962	2	FSM	ENSMUSG00000034161.9	ENSMUST00000043089.9	1035	2	73	0	73	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTCCAAATTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	76341792	76343649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_76342387_76343281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008968	chr15	-	236	1	Genic_Genomic	ENSMUSG00000022555.13	novel	NA	NA	NA	NA	9705	4	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGTTGTGGAGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	76386446	76386210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_76386200_76386400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008969	chr15	-	347	3	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	9241	157	9241	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACACTCCTCCTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	76386910	76386371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76386589_76386691_76386755_76386843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008970	chr15	-	226	4	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	8944	517	8944	-517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCGCCTCTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	76387207	76386731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76386755_76386843_76386932_76387018_76387085_76387158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008971	chr15	-	162	2	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	8750	943	8750	-943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTGTGTTTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	76387401	76387157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76387272_76387353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008972	chr15	-	223	3	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	8166	1375	8166	-1375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCGTCTGAGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	76387985	76387589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76387629_76387717_76387822_76387905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008973	chr15	-	179	2	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	7976	1698	7976	-1698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGAGGTGAGGAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	76388175	76387912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76387981_76388064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008974	chr15	-	215	2	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	7730	1850	7730	-1850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGCTGTCAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	76388421	76388064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76388173_76388314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008975	chr15	-	214	3	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	5294	2476	5294	-2476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGAGCTGCAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	76390857	76388690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76388772_76388865_76388907_76390765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008976	chr15	-	293	2	ISM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	192	4551	192	-4551	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGACTGTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	76395959	76390765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76390854_76395754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008977	chr15	-	431	2	NNC	ENSMUSG00000022559.9	novel	1710	9	NA	NA	2327	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	76420608	76419920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_76420164_76420420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008978	chr15	-	724	3	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	1929	0	1929	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	76421006	76419920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76420164_76420424_76420672_76420772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008979	chr15	-	554	3	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	1728	544	1728	-544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGAGGGGTACCCGA	NA	NA	NA	NA	NA	NA	NA	NA	76421207	76420464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76420672_76420772_76421005_76421092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008980	chr15	+	1647	5	FSM	ENSMUSG00000022560.10	ENST00000532815.2	1653	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCAGTGTGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	76421894	76425306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_76422124_76423587_76423803_76423893_76424780_76424871_76424996_76425113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008981	chr15	-	614	3	ISM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	20	2002	20	-2002	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCTGGAGACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	76422915	76421922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76421987_76422116_76422276_76422524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008982	chr15	+	699	3	ISM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	67	4733	67	-1231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCAGGAAAGCCGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	76423098	76424075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76423396_76423582_76423803_76423893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008983	chr15	+	896	4	FSM	ENSMUSG00000022560.10	ENST00000526338.7	894	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCAGTGTGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	76423602	76425306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_76423803_76424400_76424780_76424871_76424996_76425113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008984	chr15	+	893	4	NNC	ENSMUSG00000022560.10	novel	894	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTGTGGCCTCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	76423604	76425308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76423803_76424400_76424780_76424871_76424993_76425113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008985	chr15	+	886	4	NNC	ENSMUSG00000022560.10	novel	894	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCAGTGTGGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	76423609	76425306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76423803_76424403_76424780_76424871_76424996_76425113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008986	chr15	-	114	1	ISM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	11672	0	11592	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76480119	76480005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76480000_76480100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008987	chr15	-	188	2	ISM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	11506	16	11426	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGATTTCTTTCAGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	76480285	76480021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76480133_76480208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008988	chr15	-	151	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	10511	968	10511	-968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATGTGGGTCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	76481200	76480976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76481044_76481116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008989	chr15	-	170	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	9998	1446	9998	-1446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAAGGGCCCGTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	76481713	76481454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76481542_76481630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008990	chr15	-	162	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	8378	3085	8378	-3085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCATGGGCATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	76483333	76483093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76483156_76483233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008991	chr15	-	199	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	7672	3755	7672	-3755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTGAAGTCCGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	76484039	76483763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76483863_76483939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008992	chr15	-	193	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	7210	4214	7210	-4214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGAGGCAGAAGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	76484501	76484222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76484327_76484412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008993	chr15	-	235	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	6923	4469	6923	-4469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAGCGATTCCTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	76484788	76484477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76484592_76484667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008994	chr15	-	170	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	6481	4907	6481	-4907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTATTCTTAGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	76485230	76484915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76484993_76485137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008995	chr15	-	252	3	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	5079	6155	5079	-6155	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACTTTGACAAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	76486632	76486163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76486210_76486327_76486422_76486520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008996	chr15	-	156	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	4127	7304	4127	-7304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGCACGAGGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	76487584	76487312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76487386_76487501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008997	chr15	-	179	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	3892	7503	3892	-7503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTCGGGTAAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	76487819	76487511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76487583_76487711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008998	chr15	-	144	2	ISM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	3758	7723	3758	-7723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTTCAAAGACGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	76487953	76487731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76487846_76487923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000008999	chr15	-	1046	6	ISM	ENSMUSG00000063354.8	ENST00000276833.9	1215	7	426	0	426	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTATCCCATCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	76498429	76496734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498146_76498256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009000	chr15	-	691	3	ISM	ENSMUSG00000063354.8	ENST00000276833.9	1215	7	-4	1066	-4	-1066	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAAGAGGCAAGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	76498859	76497800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76498146_76498256_76498430_76498686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009001	chr15	-	659	4	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	1442	1570	-586	-1570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGGCGCACTTACCGG	NA	NA	NA	NA	NA	NA	NA	NA	76499441	76498304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76498430_76498686_76498859_76498949_76499114_76499243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009002	chr15	-	719	4	ISM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	522	2052	522	-2052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCAACTGACCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	76500361	76498786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76498859_76498949_76499114_76499243_76499440_76500074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009003	chr15	-	596	5	ISM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	2512	0	1128	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	76507694	76506308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009004	chr15	-	685	5	ISM	ENSMUSG00000115987.2	ENST00000377348.6	754	7	447	0	447	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCGAGACAGGAATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	76508375	76506429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009005	chr15	-	2083	4	FSM	ENSMUSG00000053929.18	ENST00000530374.6	2139	4	63	-7	62	7	multi-exon	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCTACAGGCTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	76541058	76529641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009006	chr15	-	1272	2	FSM	ENSMUSG00000053929.18	ENSMUST00000231152.2	1271	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATTTGTTTATTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76543956	76542331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_76543066_76543418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009007	chr15	-	1261	2	NNC	ENSMUSG00000053929.18	novel	1271	2	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGTTTATTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	76543951	76542332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_76543061_76543418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009008	chr15	-	731	1	NIC	ENSMUSG00000053929.18	novel	1271	2	NA	NA	887	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTATGGAATTTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	76543069	76542338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_76542300_76543100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009009	chr15	+	623	2	ISM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	53	4220	21	-4220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGCTGGGCCTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	76555867	76574899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76555963_76574371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009010	chr15	+	747	3	ISM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	50	4234	50	-4234	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCTGCCCCTTAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	76555896	76574885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76555963_76573527_76573695_76574371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009011	chr15	+	744	2	ISM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	22220	42	22220	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTTATTGTGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	76578066	76579077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76578231_76578497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009012	chr15	+	624	1	NIC	ENSMUSG00000033819.17	novel	2692	11	NA	NA	22649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	76578495	76579119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_76578500_76579100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009013	chr15	+	801	1	ISM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	1974	0	1974	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTCTGCCCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	76587638	76588439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76587600_76588400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009014	chr15	+	607	2	ISM	ENSMUSG00000033728.15	ENSMUST00000155735.2	2286	6	2252	1322	2252	-1266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGGCCTGTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	76597182	76597969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76597421_76597600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009015	chr15	+	836	2	ISM	ENSMUSG00000033728.15	ENSMUST00000155735.2	2286	6	2910	521	2910	-465	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCGGGCCGTGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	76597840	76598770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76598186_76598279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009016	chr15	+	416	1	ISM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	4038	2608	3945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	76598875	76599291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76598900_76599300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009017	chr15	+	406	1	ISM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	6656	0	6563	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTTATTCTGGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	76601493	76601899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76601500_76601900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009018	chr15	-	1402	1	ISM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	974	0	974	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATTGACTTTAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	76607066	76605664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76605700_76607100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009019	chr15	-	1571	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	22	161	22	-161	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGCCAGGGACCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	76608018	76605825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_76607184_76607370_76607420_76607854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009020	chr15	-	995	2	ISM	ENSMUSG00000033697.17	ENSMUST00000036176.16	4500	12	76524	12877	76437	-12877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTAGGAGAACAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	76625759	76621061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76622010_76625712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009021	chr15	-	371	2	ISM	ENSMUSG00000033697.17	ENSMUST00000177026.3	371	3	52344	-4	52344	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGCCCATGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	76649852	76642240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76642444_76649684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009022	chr15	-	263	1	NIC	ENSMUSG00000033697.17	novel	542	3	NA	NA	59693	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGCCCATGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	76642503	76642240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_76642200_76642500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009023	chr15	-	1076	1	ISM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	18751	0	18751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTGTAGTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	76736884	76735808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76735800_76736900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009024	chr15	+	1087	2	ISM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	8960	1375	8934	-1375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCAGGTGGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76772468	76775214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76772548_76774206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009025	chr15	+	1045	1	ISM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	12092	0	12016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	76775550	76776595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76775600_76776600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009026	chr15	+	142	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	20	875	-6	-761	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTACACCATCCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	76784129	76784630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_76784193_76784551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009027	chr15	+	124	1	ISM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	1272	0	1246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	76785381	76785505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_76785400_76785500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009028	chr15	+	853	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCGTGTGTGAGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	76788277	76790516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009029	chr15	+	961	5	NNC	ENSMUSG00000003970.10	novel	1020	5	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788355	76790514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76788651_76788738_76788881_76789022_76789237_76790055_76790172_76790320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009030	chr15	+	817	5	NNC	ENSMUSG00000003970.10	novel	1020	5	NA	NA	197	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788498	76790514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76788645_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009031	chr15	+	818	5	NNC	ENSMUSG00000003970.10	novel	1020	5	NA	NA	198	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76788499	76790514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76788651_76788738_76788881_76789017_76789233_76790055_76790172_76790320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009032	chr15	+	195	1	NIC	ENSMUSG00000003970.10	novel	851	6	NA	NA	2018	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76790319	76790514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_76790300_76790500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009033	chr15	-	267	1	Genic_Genomic	ENSMUSG00000054967.8	novel	NA	NA	NA	NA	7376	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCTGAGTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76794834	76794567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_76794600_76794800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009034	chr15	-	273	2	ISM	ENSMUSG00000054967.8	ENSMUST00000048854.8	1608	4	606	1167	606	-1167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCCCAGAATGCCCACGG	NA	NA	NA	NA	NA	NA	NA	NA	76801604	76796217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76796376_76801489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009035	chr15	-	245	2	ISM	ENSMUSG00000054967.8	ENSMUST00000048854.8	1608	4	245	6439	245	-6439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGGAGACCCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76801965	76801489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76801604_76801834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009036	chr15	-	222	2	ISM	ENSMUSG00000054967.8	ENSMUST00000048854.8	1608	4	-52	6783	-52	-6783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCCCCATCTGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	76802262	76801833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76801962_76802168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009037	chr15	+	1008	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	106	-3	106	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76832827	76834932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009038	chr15	+	938	4	NNC	ENSMUSG00000063236.7	novel	1111	4	NA	NA	-42	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGGTGTGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76832906	76834932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_76833129_76833267_76833353_76833743_76833891_76834448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009039	chr15	-	1056	4	FSM	ENSMUSG00000018893.16	ENSMUST00000166179.9	1058	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTCCGTCCGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	76934868	76899686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_76900273_76901775_76901999_76906688_76906792_76934724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009040	chr15	-	4733	1	ISM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	223206	0	69834	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	76967922	76963189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76963200_76967900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009041	chr15	-	343	2	ISM	ENSMUSG00000033565.19	ENSMUST00000227930.2	1218	10	67905	142	67905	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTGAATTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	76969851	76968137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_76968407_76969777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009042	chr15	-	271	1	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	69348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTGAATTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	76968408	76968137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_76968100_76968400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009043	chr15	-	373	2	ISM	ENSMUSG00000033565.19	ENSMUST00000227533.2	1041	12	20612	32758	20612	-32758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTCATTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77017144	77001119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77001265_77016916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009044	chr15	-	375	2	ISM	ENSMUSG00000033565.19	ENST00000416721.6	1243	13	-124	48668	1	-48612	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTCATGGAGAACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	77037936	77016973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77017142_77037729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009045	chr15	-	286	1	ISM	ENSMUSG00000057346.13	ENSMUST00000089452.6	1527	3	6960	0	6960	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTGACTCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	77288274	77287988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77288000_77288300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009046	chr15	-	1527	3	FSM	ENSMUSG00000057346.13	ENSMUST00000089452.6	1527	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTGACTCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	77295234	77287988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_77289283_77289780_77289907_77295127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009047	chr15	-	567	1	ISM	ENSMUSG00000050014.9	ENSMUST00000089465.6	2325	4	11740	0	11740	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCAAGCCTTATGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	77468585	77468018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77468000_77468600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009048	chr15	-	571	2	ISM	ENSMUSG00000050014.9	ENSMUST00000089465.6	2325	4	7308	1551	7308	-1551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTAAAGATCATGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	77473017	77469569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77470012_77472888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009049	chr15	+	1142	2	ISM	ENSMUSG00000068246.7	ENSMUST00000109775.4	1573	3	5409	240	5409	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTGGACTAAACACGGA	NA	NA	NA	NA	NA	NA	NA	NA	77618702	77620342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_77618791_77619288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009050	chr15	+	1106	1	ISM	ENSMUSG00000068246.7	ENSMUST00000109775.4	1573	3	6183	0	6183	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTGTCTGACTCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	77619476	77620582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_77619500_77620600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009051	chr15	-	1085	1	ISM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	80503	1	51559	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGTGTCTGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77645872	77644787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77644800_77645900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009052	chr15	-	1142	2	ISM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	79028	425	50142	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTTCTTGTAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	77647289	77645212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77646217_77647151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009053	chr15	-	125	1	NIC	ENSMUSG00000022443.18	novel	7433	41	NA	NA	17148	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGCTGGCGCCTTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	77680283	77680158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_77680200_77680300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009054	chr15	-	552	3	FSM	ENSMUSG00000022443.18	ENST00000401701.1	630	3	78	0	78	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCTGGCGCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	77697353	77680159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_77680281_77692067_77692225_77697079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009055	chr15	-	232	2	ISM	ENSMUSG00000022443.18	ENST00000401701.1	630	3	287	11898	287	-11898	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGGGAGTCCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	77697144	77692057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77692225_77697079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009056	chr15	-	791	1	Genic_Genomic	ENSMUSG00000005354.17	novel	NA	NA	NA	NA	13138	7	mono-exon	FALSE	NA	NA	NA	NA	NA	572	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTGTGGGCACTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	77800030	77799239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_77799200_77800000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009057	chr15	-	1217	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	3	78	3	-78	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTGGTTCTGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	77813203	77799324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009058	chr15	-	813	2	NNC	ENSMUSG00000005354.17	novel	2049	3	NA	NA	4300	42	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTGTCCCTTCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	77808868	77799367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_77800051_77808738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009059	chr15	-	677	3	FSM	ENSMUSG00000005354.17	ENSMUST00000100486.6	676	3	4	-5	4	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCTCACAACCATCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	77813193	77810592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_77810920_77811891_77812155_77813106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009060	chr15	-	687	4	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	9069	-4	9069	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCTCCCGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	77845944	77843193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009061	chr15	-	747	5	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	8242	542	8242	-542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGAGGAAGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	77846771	77843739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009062	chr15	-	642	5	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	7486	954	7486	-954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTCCTGTGCGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	77847527	77844151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009063	chr15	-	524	4	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	5800	3441	5800	-3441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCACAGGAGCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	77849213	77846638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77846771_77847377_77847526_77848219_77848353_77849102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009064	chr15	-	535	5	ISM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	3381	5022	3381	-5022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCACCCTTTGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	77851632	77848219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009065	chr15	-	1140	2	NNC	ENSMUSG00000044986.11	novel	1144	2	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGCCTCCTTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	78290104	78283754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_78284225_78289434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009066	chr15	-	1145	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGCCTCCTTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	78290107	78283754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_78284231_78289438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009067	chr15	-	1125	2	NNC	ENSMUSG00000044986.11	novel	1144	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	78290094	78283755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_78284225_78289438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009068	chr15	-	1128	2	NNC	ENSMUSG00000044986.11	novel	1144	2	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	78290095	78283755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_78284231_78289442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009069	chr15	+	1263	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	57	-9	-28	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTGTGAGAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	78294238	78298215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_78294865_78297578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009070	chr15	+	401	3	ISM	ENSMUSG00000033287.17	ENSMUST00000162517.8	901	8	102	5423	4	-5423	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTGGAGAGAGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	78312865	78317274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78313068_78314241_78314351_78317184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009071	chr15	+	445	5	ISM	ENSMUSG00000033287.17	ENST00000402077.7	1254	8	4327	1305	3294	-878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGAGAGCTCCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	78317183	78321819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009072	chr15	+	826	5	ISM	ENSMUSG00000033287.17	ENST00000403888.7	1329	9	6925	-2	5892	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGAGGATCATGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	78319781	78323126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78319911_78321100_78321195_78321357_78321433_78321783_78321872_78322686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009073	chr15	+	535	4	ISM	ENSMUSG00000033287.17	ENST00000402077.7	1254	8	7012	127	5979	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCGCCCTTGCTGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	78319868	78322997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78319911_78321100_78321195_78321783_78321872_78322686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009074	chr15	+	444	1	NIC	ENSMUSG00000033287.17	novel	1632	7	NA	NA	8796	5	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGATCATGGGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	78322685	78323129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_78322700_78323100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009075	chr15	-	724	4	ISM	ENSMUSG00000016942.7	ENST00000381792.6	2277	16	17623	-1	17623	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCTACAGAGCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	78327957	78324410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_78324573_78324807_78325017_78326481_78326754_78327876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009076	chr15	-	1359	1	ISM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	4921	0	4888	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCCTGGTACTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	78408904	78407545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_78407500_78408900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009077	chr15	-	1414	2	ISM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	2274	763	2241	-761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGTGCCCAGCAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	78411551	78408308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_78409599_78411427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009078	chr15	+	436	2	FSM	ENSMUSG00000116307.2	ENSMUST00000230340.2	475	2	39	0	39	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGAGGACATTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	78415347	78416997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_78415610_78416823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009079	chr15	+	2484	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	14	62	14	-62	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCGTGGAAAATGCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	78726837	78735035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_78726926_78731294_78732020_78733364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009080	chr15	+	1703	1	ISM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	6571	0	6571	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGACCTTGGGGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	78733394	78735097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78733400_78735100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009081	chr15	-	293	1	NIC	ENSMUSG00000043501.6	novel	592	4	NA	NA	4377	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTTAGCATTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	78735352	78735059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_78735100_78735400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009082	chr15	-	392	2	ISM	ENSMUSG00000043501.6	ENSMUST00000044584.6	592	4	4129	36	4129	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGAATCCACATTT	NA	NA	NA	NA	NA	NA	NA	NA	78735600	78735095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_78735351_78735463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009083	chr15	-	171	1	NIC	ENSMUSG00000043501.6	novel	592	4	NA	NA	4097	2	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTCAAAGGAGAACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	78735632	78735461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_78735500_78735600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009084	chr15	-	373	3	FSM	ENSMUSG00000043501.6	ENST00000215886.6	372	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGTCAAAGGAGAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	78739808	78735462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_78735624_78736477_78736553_78739671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009085	chr15	-	178	2	NNC	ENSMUSG00000043501.6	novel	372	3	NA	NA	31	-1014	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACCGGTACGTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	78739777	78736477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_78736550_78739671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009086	chr15	-	177	2	NNC	ENSMUSG00000043501.6	novel	372	3	NA	NA	31	-1014	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACCGGTACGTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	78739777	78736477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_78736553_78739675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009087	chr15	+	619	4	ISM	ENSMUSG00000033128.10	ENST00000325180.12	2403	15	14383	930	14383	-930	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCTCTGACGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	78776142	78777855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78776287_78776652_78776841_78777366_78777537_78777738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009088	chr15	+	841	3	ISM	ENSMUSG00000033128.10	ENST00000325180.12	2403	15	15607	292	15607	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAATGGCCCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	78777366	78778493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78777537_78777738_78777850_78777933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009089	chr15	+	659	1	ISM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	16737	0	16367	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	78778126	78778785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78778100_78778800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009090	chr15	+	394	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	355	1252	355	-1252	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGCCTGGAGACCGACA	NA	NA	NA	NA	NA	NA	NA	NA	78798473	78802465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_78798732_78802329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009091	chr15	+	305	1	ISM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	5294	0	5294	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTGTGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78803412	78803717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78803400_78803700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009092	chr15	+	863	5	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	-10	77854	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4096	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTTCCAGCAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78810914	78892519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197_78814668_78892468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009093	chr15	+	805	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGACACATACTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	78810922	78814670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811003_78812169_78812250_78813832_78814005_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009094	chr15	+	811	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	-2	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGACACATACTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	78810922	78814670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811009_78812169_78812250_78813832_78814005_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009095	chr15	+	791	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810923	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811009_78812183_78812250_78813832_78814005_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009096	chr15	+	784	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810924	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811003_78812183_78812250_78813832_78814005_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009097	chr15	+	804	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810924	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811005_78812169_78812250_78813832_78814009_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009098	chr15	+	782	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810925	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811005_78812169_78812250_78813832_78814009_78814218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009099	chr15	+	783	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810927	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811005_78812183_78812250_78813832_78814005_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009100	chr15	+	875	5	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	4	77854	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTTCCAGCAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78810928	78892519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197_78814668_78892442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009101	chr15	+	802	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810930	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811009_78812169_78812250_78813832_78814009_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009102	chr15	+	817	5	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	7	77854	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATTTCCAGCAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78810931	78892519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197_78814668_78892497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009103	chr15	+	794	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810932	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811003_78812169_78812250_78813832_78814009_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009104	chr15	+	770	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810934	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811005_78812169_78812230_78813832_78814005_78814197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009105	chr15	+	766	4	NNC	ENSMUSG00000068220.7	novel	800	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	NA	NA	NA	NA	NA	NA	NA	78810937	78814665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_78811005_78812169_78812250_78813832_78814005_78814218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009106	chr15	+	2397	3	ISM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	2874	1027	2874	-1027	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCTAACGGGGAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	78822006	78826811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78822151_78824265_78824367_78824659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009107	chr15	+	2145	2	ISM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	5124	1144	5124	-1144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACACAGAGAAACCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78824256	78826694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78824367_78824659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009108	chr15	+	2179	1	ISM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	6527	0	6527	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGGCCACGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	78825659	78827838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78825700_78827800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009109	chr15	+	534	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	1523	-2	1523	2	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTGCGTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	78914172	78914706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_78914200_78914700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009110	chr15	+	1105	3	ISM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	5473	320	5473	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCCTCAAGCCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	78920546	78922233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78920639_78920952_78921075_78921342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009111	chr15	+	915	1	Genic_Genomic	ENSMUSG00000006378.16	novel	NA	NA	NA	NA	6572	7	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCACCTGCCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	78921645	78922560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_78921600_78922600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009112	chr15	-	368	4	ISM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	7342	905	545	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTTGCTTTGCCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	78939743	78938198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009113	chr15	-	89	1	NIC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	2001	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTTGCTTTGCCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	78938287	78938198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_78938200_78938300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009114	chr15	-	357	4	ISM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	6799	1399	2	-494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCAGCCACAGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	78940286	78938692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_78938804_78939491_78939617_78939694_78939743_78940213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009115	chr15	-	160	2	ISM	ENSMUSG00000033055.13	ENST00000609454.5	317	4	545	494	545	-494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCAGCCACAGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	78939743	78938692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_78938804_78939694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009116	chr15	-	342	4	ISM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	4834	2198	-1963	-1293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGATTCCTCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	78942251	78939491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_78939617_78939694_78939743_78940213_78940286_78942154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009117	chr15	+	1144	6	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	5896	4433	5815	-4286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTATACCCGGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	78965783	78974162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009118	chr15	+	1209	6	ISM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	8498	-11	8417	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTCTCATTATTATG	NA	NA	NA	NA	NA	NA	NA	NA	78968385	78978606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009119	chr15	-	575	1	NIC	ENSMUSG00000033029.13	novel	1168	5	NA	NA	5958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCACCTTGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	79019429	79018854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_79018900_79019400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009120	chr15	-	603	2	ISM	ENSMUSG00000033029.13	ENSMUST00000187550.7	1168	5	5797	3	5797	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGCCACCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79019590	79018857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79019423_79019552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009121	chr15	+	640	3	ISM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	0	5578	0	-5532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCCGTCGTGTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	79025208	79030396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79025635_79028793_79028864_79030252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009122	chr15	+	851	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	34	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79025242	79035974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009123	chr15	+	477	5	FSM	ENSMUSG00000033020.8	ENST00000470701.1	493	5	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACCCTTTCCACCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79025628	79035953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_79025668_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009124	chr15	+	378	3	ISM	ENSMUSG00000033020.8	ENST00000470701.1	493	5	4630	0	4630	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACCCTTTCCACCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79030242	79035953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79030384_79035535_79035608_79035788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009125	chr15	-	564	3	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	40462	24	40174	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATGAAGGACAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	79171990	79170780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79171096_79171309_79171384_79171815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009126	chr15	-	612	5	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	30876	553	30588	-553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTCAGGGCTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	79181576	79171309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009127	chr15	-	613	3	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	10279	25237	9991	-25237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACTGGGCCGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	79202173	79195993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79196178_79197147_79197364_79201960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009128	chr15	-	667	3	ISM	ENSMUSG00000042632.18	ENST00000660610.1	2980	17	76	26435	76	-26435	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCGGCATCCGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	79241903	79197191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79197364_79201960_79202206_79241653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009129	chr15	+	908	2	FSM	ENSMUSG00000042622.15	ENST00000538999.1	905	2	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTTAGGGTTCTAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79231683	79242257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_79231955_79241620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009130	chr15	-	1915	1	Genic_Genomic	ENSMUSG00000009035.16	novel	NA	NA	NA	NA	40324	3	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCAGCGAGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79246795	79244880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_79244900_79246800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009131	chr15	-	2285	4	ISM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	36279	335	36279	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGGGAACAGGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	79250840	79245219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009132	chr15	+	1410	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	79400612	79411940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009133	chr15	-	180	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	13023	0	13023	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCAGGACCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79520993	79507707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79507789_79520894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009134	chr15	-	190	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	12693	13199	12693	-13199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACAGAGCAGTCGACTT	NA	NA	NA	NA	NA	NA	NA	NA	79521323	79520906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79520988_79521214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009135	chr15	-	162	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	9728	13553	9728	-13553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAAGTCAGAGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	79524288	79521260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79521339_79524204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009136	chr15	-	201	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	9076	16497	9076	-16497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCCACACACTACTT	NA	NA	NA	NA	NA	NA	NA	NA	79524940	79524204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79524310_79524844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009137	chr15	-	216	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	7588	17137	7588	-17137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTATCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79526428	79524844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79524947_79526314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009138	chr15	-	174	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	6466	18638	6466	-18638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGTCTGAGAAAAATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79527550	79526345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79526462_79527492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009139	chr15	-	151	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	5797	19785	5797	-19785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCTGAGTGTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	79528219	79527492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79527573_79528148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009140	chr15	-	153	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	996	20441	996	-20441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAATATTTTCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	79533020	79528148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79528219_79532937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009141	chr15	-	179	2	ISM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	40	25273	40	-25273	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAAGTAGAACTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	79533976	79532980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79533021_79533837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009142	chr15	+	1054	4	ISM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	2170	0	2170	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGTGTAGCAAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	79545569	79551861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79545726_79549846_79549953_79550031_79550151_79551188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009143	chr15	+	1405	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	2	162	2	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAACATAGTAGTGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	79555063	79557439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009144	chr15	+	1018	4	NNC	ENSMUSG00000022427.5	novel	1569	4	NA	NA	40	213	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACACCTAGGTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79555101	79557094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_79555210_79555377_79555493_79556097_79556216_79556417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009145	chr15	+	1058	1	Genic_Genomic	ENSMUSG00000022427.5	novel	NA	NA	NA	NA	1253	1	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTTTTTATTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	79556544	79557602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_79556500_79557600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009146	chr15	-	546	1	Genic_Genomic	ENSMUSG00000022426.7	novel	NA	NA	NA	NA	12719	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTAAAAACCTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79558978	79558432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_79558400_79559000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009147	chr15	-	932	2	ISM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	11314	301	11314	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGGAGTCCATGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	79560383	79558734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79559207_79559923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009148	chr15	-	1204	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	727	1509	304	-1509	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGCTTACGGAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	79571393	79559960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009149	chr15	+	921	2	ISM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	28181	752	28181	-752	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGCCTCTCCTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	79603226	79604928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79603430_79604210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009150	chr15	+	877	1	ISM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	29758	0	29758	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	79604803	79605680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79604800_79605700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009151	chr15	-	722	1	Genic_Genomic	ENSMUSG00000022420.17	novel	NA	NA	NA	NA	12210	1	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTGTGGTGTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79646374	79645652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_79645700_79646400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009152	chr15	-	975	3	ISM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	9442	392	9358	292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCATTGGCCCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	79649226	79646045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79646727_79647710_79647795_79649016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009153	chr15	-	1699	1	ISM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	9094	0	8632	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCCCCCTGGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	79709795	79708096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79708100_79709800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009154	chr15	-	1730	2	ISM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	1114	3416	652	525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGCTGTAGGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	79717775	79711512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79713180_79717712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009155	chr15	+	663	3	ISM	ENSMUSG00000009585.19	ENSMUST00000023054.14	1842	8	11400	233	11400	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTCACCCTCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	79790623	79791874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79790804_79791051_79791165_79791504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009156	chr15	+	569	1	ISM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	14947	0	12327	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTTGTGCATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	79791550	79792119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79791600_79792100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009157	chr15	+	437	1	Genic_Genomic	ENSMUSG00000009585.19	novel	NA	NA	NA	NA	12995	18	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTTTGATTGAGGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	79792218	79792655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_79792200_79792700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009158	chr15	-	1264	2	ISM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	14175	1181	14063	1122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCTCCTTTAGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	79802678	79801188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79802252_79802477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009159	chr15	-	1078	8	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	1620	0	1620	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTCCCACATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79965987	79961991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009160	chr15	-	1045	7	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	823	540	823	-540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACTGATCCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	79966784	79962531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009161	chr15	-	1034	7	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	6	907	6	-907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCTGAGCCTTAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	79967601	79962898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009162	chr15	+	569	3	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	-26	1697	-1	-1697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGGTCCTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	79975508	79995945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79975694_79994644_79994883_79995799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009163	chr15	+	743	3	ISM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	19108	-81	19098	81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGGGTGGGCTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	79994642	79997723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79994883_79995799_79995946_79997366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009164	chr15	+	603	2	ISM	ENSMUSG00000022415.13	ENST00000318801.8	1281	5	21971	-4	21936	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCCTTGAGTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79997480	79998221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_79997851_79997988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009165	chr15	+	572	2	NNC	ENSMUSG00000022415.13	novel	1281	5	NA	NA	21959	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCATTCCTTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	79997503	79998217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_79997847_79997988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009166	chr15	+	253	1	NIC	ENSMUSG00000022415.13	novel	1281	5	NA	NA	22420	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCATTCCTTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	79997964	79998217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_79998000_79998200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009167	chr15	+	1995	3	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	24473	23	24473	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTTCTTCATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	80041800	80045885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_80042028_80042951_80043109_80044274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009168	chr15	+	1634	1	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	26947	0	26947	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCATCTTGTCTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	80044274	80045908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_80044300_80045900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009169	chr15	+	1725	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGGTTTTCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	80139385	80141743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_80139887_80140407_80140723_80140834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009170	chr15	+	773	2	FSM	ENSMUSG00000042406.9	ENST00000680446.1	950	2	-1	178	-1	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGCCACTAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	80139749	80141470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_80139887_80140834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009171	chr15	+	1178	4	FSM	ENSMUSG00000042406.9	ENST00000675582.2	1178	4	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCCGTAATAGGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	80139752	80141650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_80139887_80140407_80140530_80140616_80140723_80140834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009172	chr15	+	1875	2	FSM	ENSMUSG00000042406.9	ENST00000337304.2	1877	2	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTATGTGGGTTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	80139753	80141740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_80140723_80140834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009173	chr15	+	510	3	FSM	ENSMUSG00000042406.9	ENST00000674568.2	1187	3	4	673	4	-673	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCCTCTAGTCCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80139754	80140975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_80139887_80140485_80140723_80140834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009174	chr15	+	655	3	FSM	ENSMUSG00000042406.9	ENST00000674835.2	1244	3	97	492	97	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAAGTTGATATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80139847	80141156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_80139887_80140428_80140723_80140834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009175	chr15	+	645	1	ISM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	1623	90	1257	4	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCGTAATAGGGTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	80141007	80141652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_80141000_80141700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009176	chr15	-	202	1	Genic_Genomic	ENSMUSG00000051518.9	novel	NA	NA	NA	NA	3500	1	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAAGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80145016	80144814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_80144800_80145000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009177	chr15	-	408	3	ISM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	196	343	196	-343	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACTAACCCTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	80148320	80145158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_80145332_80145497_80145596_80148183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009178	chr15	-	230	2	ISM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	0	3362	0	-3362	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGACTGTGAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	80148516	80148177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_80148319_80148427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009179	chr15	+	138	1	FSM	ENSMUSG00000058357.3	ENSMUST00000170777.2	395	1	386	-129	386	129	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATACCTACCAAGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	80837091	80837229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_80837100_80837200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009180	chr15	+	1920	4	ISM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	17637	688	17543	-688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAGTCTGGTACACAG	NA	NA	NA	NA	NA	NA	NA	NA	80850327	80854459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_80850384_80851312_80851403_80851789_80851967_80852862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009181	chr15	+	1620	1	Genic_Genomic	ENSMUSG00000022407.11	novel	NA	NA	NA	NA	20748	5	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGGTGCAGAGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	80853532	80855152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_80853500_80855200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009182	chr15	-	535	2	FSM	ENSMUSG00000115976.2	ENSMUST00000230118.2	544	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTACCGTTGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	80890602	80889607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_80889892_80890351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009183	chr15	-	954	1	ISM	ENSMUSG00000042292.19	ENSMUST00000134469.9	4392	15	177499	0	91849	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTGTATTTGATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	80897435	80896481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_80896500_80897400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009184	chr15	+	1042	3	FSM	ENSMUSG00000050164.12	ENST00000381433.2	1047	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTACCCTGGGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	81119686	81122383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_81120057_81121333_81121510_81121887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009185	chr15	-	806	1	Genic_Genomic	ENSMUSG00000022404.9	novel	NA	NA	NA	NA	41103	7	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTCTTGATTAAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	81203910	81203104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_81203100_81203900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009186	chr15	-	1215	5	ISM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	31653	86	31653	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCTTGATGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	81213360	81203197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009187	chr15	-	130	1	Genic_Genomic	ENSMUSG00000022403.16	novel	NA	NA	NA	NA	24605	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACCTTCCCCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	81247998	81247868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_81247900_81248000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009188	chr15	-	191	2	ISM	ENSMUSG00000022403.16	ENST00000453250.1	866	9	21957	37	21957	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAATTGTCAGCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	81250646	81249687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81249780_81250547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009189	chr15	-	139	2	ISM	ENSMUSG00000022403.16	ENST00000453250.1	866	9	18959	951	18959	-951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCTGGACTCAACGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	81253644	81250601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81250691_81253594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009190	chr15	-	156	2	ISM	ENSMUSG00000022403.16	ENST00000453250.1	866	9	16840	3942	16840	-3942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTTTAAAGGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	81255763	81253592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81253644_81255658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009191	chr15	-	224	2	ISM	ENSMUSG00000022403.16	ENST00000453250.1	866	9	13493	6007	13493	-6007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTCCTGTAGAATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	81259110	81255657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81255776_81259004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009192	chr15	-	210	2	ISM	ENSMUSG00000022403.16	ENST00000453250.1	866	9	10609	9353	10609	-9353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCGCTCGTGACCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	81261994	81259003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81259108_81261888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009193	chr15	-	181	2	ISM	ENSMUSG00000022403.16	ENST00000453250.1	866	9	10401	12254	10401	-12254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGAAAGCACACAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	81262202	81261904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81262000_81262116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009194	chr15	-	225	3	ISM	ENSMUSG00000022403.16	ENSMUST00000023039.15	1089	12	11192	12466	0	-12466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAACACTGGAGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	81272603	81262116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81262202_81267180_81267248_81272530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009195	chr15	-	152	2	ISM	ENSMUSG00000022403.16	ENSMUST00000023039.15	1089	12	9869	22874	-1323	-22874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGACATTTTAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	81273926	81272524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81272602_81273851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009196	chr15	-	133	2	ISM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	7719	25982	-3922	-24201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGCGTGGTACTATAG	NA	NA	NA	NA	NA	NA	NA	NA	81276525	81273851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81273925_81276465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009197	chr15	-	165	2	ISM	ENSMUSG00000022403.16	ENSMUST00000023039.15	1089	12	4	26814	4	-26814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCAGATTTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	81283791	81276464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81276524_81283685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009198	chr15	+	712	1	ISM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	56633	0	56583	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGTCTGTCTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	81340971	81341683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81341000_81341700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009199	chr15	+	1477	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	21	177	21	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTTAACAGATCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	81350517	81360393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009200	chr15	+	647	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACGAGGAACCTGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	81350845	81359587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009201	chr15	+	1087	2	NNC	ENSMUSG00000022400.10	novel	1675	5	NA	NA	7223	-253	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGAGCGGCCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	81358064	81360317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_81358134_81359299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009202	chr15	+	1140	1	Genic_Genomic	ENSMUSG00000022400.10	novel	NA	NA	NA	NA	8591	2	mono-exon	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTCATTTTCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	81359432	81360572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_81359400_81360600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009203	chr15	+	235	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	14860	43698	14860	-43698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTACTTAGCACTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	81485689	81492575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81485747_81492397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009204	chr15	+	385	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	21566	41512	21566	-41512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAAAATGTCCTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	81492395	81494761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81492575_81494555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009205	chr15	+	236	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	23817	40598	23817	-40598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTTCCTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	81494646	81495675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81494818_81495610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009206	chr15	+	338	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	24779	38681	24779	-38681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCGGTCTGTGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	81495608	81497592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81495725_81497370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009207	chr15	+	411	3	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	26610	35207	26610	-35207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGACTGTGGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	81497439	81501066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81497617_81500232_81500327_81500926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009208	chr15	+	248	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	30106	31954	30106	-31954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACATAATTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81500935	81504319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81501065_81504200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009209	chr15	+	243	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	33371	30886	33371	-30886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATACTGGGTCGAACA	NA	NA	NA	NA	NA	NA	NA	NA	81504200	81505387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81504319_81505262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009210	chr15	+	242	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	37903	25596	37903	-25596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTTTATTTAAAATTATG	NA	NA	NA	NA	NA	NA	NA	NA	81508732	81510677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81508836_81510538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009211	chr15	+	322	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	39708	24787	39708	-24787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAGCAATTCCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	81510537	81511486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81510677_81511303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009212	chr15	+	318	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	40730	23638	40730	-23638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAACCAGCAGATGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	81511559	81512635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81511736_81512493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009213	chr15	+	326	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	41663	23335	41663	-23335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAGGCTCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	81512492	81512938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81512674_81512793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009214	chr15	+	338	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	43374	20238	43374	-20238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTTGTGGCAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	81514203	81516035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81514321_81515814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009215	chr15	+	235	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	45082	19557	45082	-19557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAACCATATGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	81515911	81516716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81516055_81516624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009216	chr15	+	222	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	52350	12179	52350	-12179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATGATATCTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81523179	81524094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81523249_81523941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009217	chr15	+	407	3	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	53117	11519	53117	-11519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCTTATTAAAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	81523946	81524754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81524093_81524195_81524343_81524640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009218	chr15	+	322	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	54630	8891	54630	-8891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGATGTAAGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	81525459	81527382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81525627_81527227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009219	chr15	+	315	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	56393	7053	56393	-7053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAAGCATAAAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	81527222	81529220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81527393_81529075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009220	chr15	+	385	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	58246	3511	58246	-3511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCTGCAACGAGTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	81529075	81532762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81529238_81532539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009221	chr15	+	418	2	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	61781	3064	61781	-3064	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGCCAGAAGATGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	81532610	81533209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81532822_81533002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009222	chr15	+	226	1	ISM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	66450	5	65218	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCTTGGTGTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	81536047	81536273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81536000_81536300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009223	chr15	+	447	1	ISM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	23980	0	23913	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	81572069	81572516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81572100_81572500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009224	chr15	-	1010	1	NIC	ENSMUSG00000022391.17	novel	2984	17	NA	NA	24602	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGGAAGCTTCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	81589461	81588451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_81588500_81589500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009225	chr15	-	1218	3	ISM	ENSMUSG00000022391.17	ENSMUST00000170134.9	2984	17	24152	5	24113	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81589950	81588453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81589460_81589653_81589776_81589860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009226	chr15	+	1784	2	ISM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	9782	1673	9782	-1673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGTGTTTGTTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	81705396	81709226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81705621_81707666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009227	chr15	+	1762	1	ISM	ENSMUSG00000022389.16	ENSMUST00000109553.10	4403	4	22681	0	13688	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTGGTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	81709302	81711064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81709300_81711100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009228	chr15	-	2686	2	FSM	ENSMUSG00000048546.9	ENSMUST00000050467.9	4151	2	216	1249	216	-1249	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGAAGCAGTGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	81742470	81733721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_81736074_81742136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009229	chr15	-	398	1	Genic_Genomic	ENSMUSG00000061360.9	novel	NA	NA	NA	NA	7011	17	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCATATATGATATACTG	NA	NA	NA	NA	NA	NA	NA	NA	81749101	81748703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_81748700_81749100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009230	chr15	-	571	3	ISM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	721	994	721	-994	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGAAACTGTCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	81755391	81749714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81750094_81754532_81754700_81755366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009231	chr15	+	1136	5	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	39702	-1	39702	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTACCAGCATGAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	81796405	81799360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009232	chr15	-	2542	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGTCATCAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	81810441	81799229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009233	chr15	+	2357	4	FSM	ENSMUSG00000042109.9	ENSMUST00000038757.8	2490	4	133	0	133	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTTGAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	81821092	81835142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_81821189_81830831_81831134_81832774_81832898_81833306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009234	chr15	-	176	1	NIC	ENSMUSG00000022474.16	novel	1059	7	NA	NA	5115	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTACTGTGTGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	81839919	81839743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_81839700_81839900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009235	chr15	-	210	2	ISM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	4618	43	4618	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAGTGGGTTTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	81840416	81839786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81839950_81840369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009236	chr15	-	191	2	ISM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	44	2252	44	-2252	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGCATGGCAACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	81844990	81841995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81842112_81844915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009237	chr15	+	549	1	FSM	ENSMUSG00000061848.6	ENSMUST00000072779.6	456	1	-17	-76	-17	76	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTATGTAATAGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	81856573	81857122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_81856600_81857100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009238	chr15	-	1179	1	ISM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	22462	0	22462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	81877902	81876723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81876700_81877900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009239	chr15	-	1224	2	ISM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	17930	1223	17930	-1223	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTTAATGATATGCT	NA	NA	NA	NA	NA	NA	NA	NA	81882434	81877946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81879047_81882310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009240	chr15	+	190	2	ISM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	7	22886	7	-22685	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCCTGTGTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	81900576	81901400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81900677_81901310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009241	chr15	+	118	2	ISM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	742	21075	742	-20874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTCTGGTTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	81901311	81903211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81901400_81903181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009242	chr15	+	791	5	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	16	12507	16	-12507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTCCTGCCTAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	81903196	81911578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81903295_81906683_81906785_81907007_81907263_81909705_81909890_81911425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009243	chr15	+	905	5	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	3500	10588	3500	-10588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGACTCCCTGCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	81906680	81913497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009244	chr15	+	901	6	ISM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	4005	8630	4005	-8630	internal_fragment	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACAGGTGAGCGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	81907185	81915455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009245	chr15	+	841	6	ISM	ENSMUSG00000022471.15	ENSMUST00000230729.2	1062	7	989	199	989	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTCTTATCAGACACTT	NA	NA	NA	NA	NA	NA	NA	NA	81913321	81924086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009246	chr15	-	143	1	Genic_Genomic	ENSMUSG00000063480.9	novel	NA	NA	NA	NA	6932	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGGTTTTGCCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	81924867	81924724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_81924700_81924900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009247	chr15	-	215	2	ISM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	3593	1738	3593	-1738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCTACGTATTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	81928206	81926463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81926570_81928097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009248	chr15	-	228	2	ISM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	5	3372	5	-3372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACATCCACAGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	81931794	81928097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_81928219_81931687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009249	chr15	+	215	2	ISM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	2159	10655	2159	-10655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGGAAGCAGGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	82014281	82015749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82014372_82015624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009250	chr15	+	238	2	ISM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	3817	7476	3817	-7476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCAGGGGCCCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	82015939	82018928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82016031_82018781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009251	chr15	+	249	2	ISM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	7147	1162	7147	-1162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAACTGTGTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	82019269	82025242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82019343_82025066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009252	chr15	+	243	1	ISM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	14039	0	14039	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCTTTGGCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	82026161	82026404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82026200_82026400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009253	chr15	+	526	2	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	106	34593	106	-34593	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCACCGCTCCGCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	82031510	82054283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82031692_82053938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009254	chr15	+	547	3	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	30202	25138	30202	-25138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGCCAAAGTGAGTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	82061606	82063738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82061789_82062917_82063111_82063566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009255	chr15	+	462	2	ISM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	32160	22417	32160	-22417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGGGAGGGCGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	82063564	82066459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82063749_82066181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009256	chr15	+	522	1	ISM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	57677	0	57654	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGCTGTGTGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	82089058	82089580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82089100_82089600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009257	chr15	-	1051	5	ISM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	579	-18	558	18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCCAGGCAGTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	82128370	82117961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009258	chr15	-	179	1	ISM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	10494	297	10473	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGTAGATGCAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	82118455	82118276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_82118300_82118500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009259	chr15	+	1534	4	ISM	ENSMUSG00000022456.19	ENST00000644076.1	2332	10	9823	0	9823	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	82173436	82178775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_82173496_82174604_82174657_82174938_82175033_82177446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009260	chr15	+	1341	1	Genic_Genomic	ENSMUSG00000022456.19	novel	NA	NA	NA	NA	13823	2	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTTTGTCTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	82177436	82178777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_82177400_82178800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009261	chr15	-	141	1	Genic_Genomic	ENSMUSG00000022453.9	novel	NA	NA	NA	NA	9112	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGTACTATGACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	82213871	82213730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_82213700_82213900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009262	chr15	-	239	2	ISM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	8026	583	7982	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCTATCCCATCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	82215001	82214315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_82214409_82214855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009263	chr15	-	233	2	ISM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	6367	1161	6323	-1052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGAACTAAACTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	82216660	82214893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_82215000_82216533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009264	chr15	-	158	2	ISM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	3964	2918	3920	2167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTCCACGGACCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	82219063	82216650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_82216732_82218986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009265	chr15	-	179	2	ISM	ENSMUSG00000022453.9	ENSMUST00000230380.2	1020	7	1952	1286	1952	-1286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGTGGACATGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	82221031	82220103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_82220222_82220970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009266	chr15	-	205	2	ISM	ENSMUSG00000022453.9	ENSMUST00000230380.2	1020	7	1260	2256	1260	-2256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAACATCGATGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	82221723	82221073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_82221143_82221587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009267	chr15	+	706	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTTGGTTGCACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	82230154	82233292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_82230471_82232100_82232242_82233043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009268	chr15	+	560	3	NNC	ENSMUSG00000022452.17	novel	705	3	NA	NA	139	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTTGGTTGCACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	82230293	82233292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_82230471_82232100_82232242_82233050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009269	chr15	-	598	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	-4	-4	-4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTCTCTTACTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	82238527	82234336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_82234573_82235179_82235296_82238281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009270	chr15	-	542	3	NNC	ENSMUSG00000022450.7	novel	590	3	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTCTCTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	82238489	82234340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_82234573_82235179_82235282_82238281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009271	chr15	-	182	1	ISM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	3983	18	3006	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGTGAACCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	82234540	82234358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_82234400_82234500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009272	chr15	-	277	2	FSM	ENSMUSG00000022450.7	ENSMUST00000230494.2	382	2	37	68	37	-68	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGAAGGTGCATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	82238418	82234432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_82234573_82238281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009273	chr15	-	1018	1	Genic_Genomic	ENSMUSG00000041852.16	novel	NA	NA	NA	NA	102655	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTCTTAAGTGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	82693653	82692635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_82692600_82693700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009274	chr15	-	890	3	ISM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	4627	2946	4627	-2946	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCTGGCAGAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	83002375	83000579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83001173_83001749_83001949_83002277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009275	chr15	-	800	1	ISM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	22609	0	22556	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	83010976	83010176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83010200_83011000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009276	chr15	-	958	3	ISM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	17721	1317	17721	-1317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGAGCACTAGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	83015811	83011495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83012257_83013394_83013462_83015681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009277	chr15	-	792	5	ISM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	10903	6600	10850	-6598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACCGTCATGGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	83022682	83016776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009278	chr15	-	385	2	ISM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	10868	9359	10868	-9359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATGAAGTTTGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	83022664	83019537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83019591_83022332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009279	chr15	-	1232	1	Genic_Genomic	ENSMUSG00000018042.19	novel	NA	NA	NA	NA	15454	2	mono-exon	FALSE	NA	NA	NA	NA	NA	512	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCGTTTCTCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	83038924	83037692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_83037700_83038900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009280	chr15	-	1733	6	ISM	ENSMUSG00000018042.19	ENSMUST00000162834.3	1982	9	8220	4	8220	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCCTGCCAGCGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	83046158	83037698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009281	chr15	+	799	2	Antisense	novelGene_ENSMUSG00000018042.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGACAGGCCACCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	83038223	83043129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_+_83038926_83043032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009282	chr15	-	863	5	ISM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	-1	7388	-1	-3818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTGGAGACACCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	83056794	83045082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009283	chr15	+	2364	1	FSM	ENSMUSG00000116508.2	ENSMUST00000231106.2	2459	1	95	0	95	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCACCTGAGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	83056645	83059009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_83056600_83059000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009284	chr15	-	2091	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCCTCATGGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	83135973	83110921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_83112796_83114714_83114859_83135900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009285	chr15	-	2069	3	NNC	ENSMUSG00000047878.14	novel	2092	3	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	83135948	83110922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_83112796_83114710_83114859_83135900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009286	chr15	+	2018	2	Antisense	novelGene_ENSMUSG00000047878.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAGATAGAAGGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83110922	83114860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_+_83112798_83114717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009287	chr15	-	362	1	Genic_Genomic	ENSMUSG00000054277.9	novel	NA	NA	NA	NA	50075	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTTGCCTGTGTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	83184300	83183938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_83183900_83184300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009288	chr15	-	519	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	43224	-283	43203	283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTGGTGTTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	83191172	83184597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83184904_83187303_83187426_83191081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009289	chr15	-	340	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	42017	2422	41996	-2422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAGGCAATGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	83192379	83187302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83187426_83191081_83191173_83192253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009290	chr15	-	299	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	39808	6255	39787	-6255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCCATAAGCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	83194588	83191135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83191173_83192253_83192378_83194450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009291	chr15	-	391	3	ISM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	36633	8328	36560	-7387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCAGACAGATGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	83197815	83192267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83192378_83194450_83194586_83197669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009292	chr15	-	350	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	36581	7404	36560	-7404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTACTTTGGAATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	83197815	83192284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83192378_83194450_83194583_83197690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009293	chr15	-	389	3	ISM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	35779	10530	35706	-9589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGGCTCTTCAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	83198669	83194469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83194586_83197669_83197814_83198540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009294	chr15	-	377	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	27480	12827	27459	-12827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTCCAGCTCCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	83206916	83197707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83197814_83198540_83198670_83206774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009295	chr15	-	319	3	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	26042	13660	26021	-13660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGGTCTGCAGGGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	83208354	83198540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83198670_83206774_83206915_83208304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009296	chr15	-	320	4	ISM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	7053	27025	7032	-27025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTTTTCTACATTAACA	NA	NA	NA	NA	NA	NA	NA	NA	83227343	83211905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83211944_83216882_83216971_83220854_83220928_83227222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009297	chr15	-	293	3	ISM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	15578	30696	15578	-29837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGTGGAGTAACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	83218797	83214717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83214808_83216886_83216971_83218678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009298	chr15	-	296	3	ISM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	13447	32859	13447	-32000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGCCTTGTTCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	83220928	83216880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83216971_83218678_83218811_83220854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009299	chr15	-	476	4	ISM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	-58	34657	15	-33798	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCTTTAGGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83234433	83218678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83218811_83220854_83220928_83227222_83227342_83234281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009300	chr15	-	1709	1	ISM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	87291	0	55500	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCACTTTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	83261516	83259807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83259800_83261500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009301	chr15	-	1024	3	ISM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	53007	911	53007	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGGTTCTATGGCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	83264009	83261229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83261932_83263199_83263397_83263884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009302	chr15	+	849	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	-6	-6	-6	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTACTTAGTGGAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	83447786	83458410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009303	chr15	+	822	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83447792	83458404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_83447846_83455585_83455782_83456400_83456540_83457970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009304	chr15	+	841	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83447792	83458404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_83447846_83455585_83455801_83456400_83456540_83457970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009305	chr15	+	836	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTACTTAGTGGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	83447793	83458408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_83447842_83455585_83455797_83456400_83456540_83457970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009306	chr15	+	823	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83447796	83458404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_83447846_83455595_83455797_83456400_83456540_83457970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009307	chr15	+	772	3	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	7792	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83455584	83458404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_83455801_83456417_83456540_83457970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009308	chr15	-	1050	1	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	19018	0	19018	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAGGTACTTCACATG	NA	NA	NA	NA	NA	NA	NA	NA	83460340	83459290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83459300_83460300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009309	chr15	-	1131	2	ISM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	17270	969	17270	-969	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTAGTGTTAAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83462088	83460259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_83461250_83461947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009310	chr15	+	728	1	Genic_Genomic	ENSMUSG00000115925.2	novel	NA	NA	NA	NA	8229	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTATCTGGTCAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	84019733	84020461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_84019700_84020500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009311	chr15	+	257	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	1	21410	1	-21410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTCTGTGGAACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	84076442	84080058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84076586_84079944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009312	chr15	+	306	3	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	3500	18604	3500	-18604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCATGGGGAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	84079941	84082864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84080056_84081205_84081308_84082774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009313	chr15	+	265	3	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	4789	17395	4789	-17395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATGGTAGGGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	84081230	84084073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84081308_84082774_84082863_84083973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009314	chr15	+	228	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	7531	16855	7531	-16855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGAGAGAAAGTAGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	84083972	84084613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84084081_84084493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009315	chr15	+	172	2	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	7593	-16844	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGCCAAGCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	84084034	84084624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_84084076_84084493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009316	chr15	+	349	3	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	8051	14909	8051	-14909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGACTTGCTCTCGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	84084492	84086559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84084625_84084830_84084919_84086430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009317	chr15	+	276	3	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	9984	13189	9984	-13189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCGCCTTGGACTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	84086425	84088279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84086560_84086969_84087042_84088209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009318	chr15	+	190	3	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	10570	10324	10570	-10324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCGGCAGACGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	84087011	84091144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84087042_84088209_84088297_84091071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009319	chr15	+	141	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	14629	9366	14629	-9366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGAGCTTAGACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	84091070	84092102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84091143_84092033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009320	chr15	+	222	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	15590	6632	15590	-6632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCCCGGCCACGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	84092031	84094836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84092102_84094684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009321	chr15	+	292	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	18241	6088	18241	-6088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGCCACTGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	84094682	84095380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84094832_84095237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009322	chr15	+	313	2	ISM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	18794	2973	18794	-2973	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACGCTCAGCGGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84095235	84098495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84095380_84098326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009323	chr15	+	203	1	Genic_Genomic	ENSMUSG00000022437.8	novel	NA	NA	NA	NA	24826	2	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCGTCGATTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	84101267	84101470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_84101300_84101500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009324	chr15	+	2167	2	ISM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	80671	629	80671	-629	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGTCTAGGCCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	84196914	84199260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84196977_84197155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009325	chr15	+	227	2	ISM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	152	15709	152	-15709	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCAACGAGGGCGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	84565354	84572164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84565521_84572103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009326	chr15	+	174	1	ISM	ENSMUSG00000036106.16	ENSMUST00000171460.8	1719	9	33880	0	22498	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	84587700	84587874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84587700_84587900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009327	chr15	+	625	2	ISM	ENSMUSG00000016619.11	ENSMUST00000230411.2	1900	9	10160	4629	10160	-4629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCCCTAACTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84817809	84819579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84817920_84819064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009328	chr15	+	711	3	ISM	ENSMUSG00000016619.11	ENSMUST00000230411.2	1900	9	11550	1546	11550	-1546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACACCAACCTAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	84819199	84822662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84819725_84821687_84821770_84822558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009329	chr15	+	602	2	ISM	ENSMUSG00000016619.11	ENSMUST00000230411.2	1900	9	14909	-121	14909	121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTACCAGTTAGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	84822558	84824329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84822678_84823846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009330	chr15	+	593	1	ISM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	18960	0	18922	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGGTACTGTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	84826571	84827164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84826600_84827200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009331	chr15	+	198	2	ISM	ENSMUSG00000022435.7	ENST00000396082.2	516	4	913	1001	913	-1001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTCCACAGCCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	84902318	84905597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84902383_84905463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009332	chr15	+	208	2	ISM	ENSMUSG00000022435.7	ENST00000396082.2	516	4	4125	18	4125	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGCTTCAAGACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	84905530	84906580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84905597_84906438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009333	chr15	+	162	1	ISM	ENSMUSG00000022435.7	ENSMUST00000023070.7	1093	6	5097	148	5033	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAAGCCCCGGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	84906438	84906600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84906400_84906600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009334	chr15	+	943	2	ISM	ENSMUSG00000022434.9	ENSMUST00000229203.2	2605	9	15999	441	15999	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATATTAAGATTTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	84942941	84946590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84943027_84945732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009335	chr15	-	292	3	ISM	ENSMUSG00000022432.8	ENST00000357450.9	3804	26	65630	-2	65630	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGCTAGTTCTAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	84950532	84944006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84944047_84949167_84949307_84950419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009336	chr15	+	919	1	ISM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	24823	0	19170	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84946112	84947031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_84946100_84947000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009337	chr15	-	234	3	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	64156	366	64153	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACACCGAAGACCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84952009	84949255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84949307_84950419_84950531_84951937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009338	chr15	-	278	3	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	62166	1587	62163	-57	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGAAAGAGGAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	84953999	84950476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84950531_84951937_84952008_84953845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009339	chr15	-	333	3	ISM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	61029	3093	61026	-1563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATGAAGTAGATGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	84955136	84951982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84952008_84953845_84953998_84954980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009340	chr15	-	298	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	60221	4577	60221	-4577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAACAGTGCCCAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84955941	84954996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84955136_84955782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009341	chr15	-	409	3	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	42214	5363	42214	-5363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATTGAGTTTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	84973948	84955782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84955940_84970293_84970390_84973792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009342	chr15	-	302	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	40942	23373	40942	-23373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCTAGCCAATAACATAC	NA	NA	NA	NA	NA	NA	NA	NA	84975220	84973792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84973947_84975072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009343	chr15	-	285	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	39875	24658	39875	-24658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGGTAATTAATAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	84976287	84975077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84975219_84976143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009344	chr15	-	365	3	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	34339	25726	34339	-25726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAATTTATTATCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	84981823	84976145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84976286_84980846_84980954_84981705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009345	chr15	-	221	2	NNC	ENSMUSG00000022432.8	novel	3405	22	NA	NA	34339	-30427	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTGTTTTAAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	84981823	84980846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_84980950_84981705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009346	chr15	-	261	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	33925	31283	33925	-31283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTGTAGTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	84982237	84981702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84981823_84982096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009347	chr15	-	288	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	24895	31676	24895	-31676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGTAAACTTGCCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84991267	84982095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84982235_84991118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009348	chr15	-	326	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	21138	40692	21138	-40692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCATCATAAAAATTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	84995024	84991111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84991266_84994852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009349	chr15	-	288	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	19122	44478	19122	-44478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGCAAGACATATTGC	NA	NA	NA	NA	NA	NA	NA	NA	84997040	84994897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84995033_84996887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009350	chr15	-	345	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	17092	46500	17092	-46500	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGACATTCCTTGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	84999070	84996919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84997074_84998879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009351	chr15	-	246	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	16038	48507	16038	-48507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAAGTTCTGGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	85000124	84998926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_84999088_85000039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009352	chr15	-	228	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	11200	49619	11200	-49619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTAGGAAAACAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	85004962	85000038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_85000123_85004818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009353	chr15	-	324	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	10191	54398	10191	-54398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAAGGATTCTATAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	85005971	85004817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_85004960_85005789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009354	chr15	-	349	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	8070	55451	8070	-55451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATGGAAAAGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	85008092	85005870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_85006049_85007921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009355	chr15	-	341	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	4325	57569	4325	-57569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGCTAAGAAAAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	85011837	85007988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_85008161_85011668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009356	chr15	-	437	3	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	2126	61294	2126	-61294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAGCTGCAGAACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	85014036	85011713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_85011873_85011959_85012073_85013871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009357	chr15	-	274	2	ISM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	10	63490	10	-63490	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTGGAGAAGAGAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	85016152	85013909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_85014061_85016029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009358	chr15	+	312	2	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	3	29875	3	-22296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCTGTTACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	85090208	85106211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85090414_85106104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009359	chr15	+	245	2	ISM	ENSMUSG00000006369.15	ENST00000340923.9	1590	13	-16	19921	-16	-19921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAGGCCACCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	85106101	85108586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85106211_85108450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009360	chr15	+	332	3	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	18281	22266	2369	-14687	internal_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTGGGATCTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	85108486	85113820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85108587_85111168_85111341_85113760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009361	chr15	+	268	3	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	21026	20985	5114	-13406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATCTGAGAGCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	85111231	85115101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85111341_85113760_85113818_85114999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009362	chr15	+	242	2	ISM	ENSMUSG00000006369.15	ENST00000340923.9	1590	13	8880	12752	8880	-12752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGCTCACATCCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	85114997	85115755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85115102_85115617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009363	chr15	+	278	2	ISM	ENSMUSG00000006369.15	ENST00000340923.9	1590	13	9498	11630	9498	-11630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGACACGCGCCGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	85115615	85116877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85115756_85116739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009364	chr15	+	284	2	ISM	ENSMUSG00000006369.15	ENST00000340923.9	1590	13	10620	6555	10620	-6555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTATCTCATACACGTG	NA	NA	NA	NA	NA	NA	NA	NA	85116737	85121952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85116878_85121808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009365	chr15	+	390	3	ISM	ENSMUSG00000006369.15	ENST00000340923.9	1590	13	15700	4887	15700	-4887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTGGGGTCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	85121817	85123620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85121953_85122663_85122793_85123494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009366	chr15	+	318	3	ISM	ENSMUSG00000006369.15	ENST00000340923.9	1590	13	16603	3567	16603	-3567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGCACCCTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	85122720	85124940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85122793_85123494_85123621_85124820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009367	chr15	+	379	3	ISM	ENSMUSG00000006369.15	ENST00000340923.9	1590	13	18700	0	18700	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCCCTGGGGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85124817	85128507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85124941_85126211_85126344_85128383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009368	chr15	+	361	3	ISM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	36064	278	20152	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACCGCTGGCAATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	85126269	85135808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85126344_85128383_85128508_85135645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009369	chr15	+	257	1	Genic_Genomic	ENSMUSG00000006369.15	novel	NA	NA	NA	NA	29713	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTTGTACCTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85135830	85136087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_85135800_85136100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009370	chr15	+	213	1	Genic_Genomic	ENSMUSG00000006369.15	novel	NA	NA	NA	NA	64410	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGTTTTTATCATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	85170527	85170740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_85170500_85170700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009371	chr15	+	277	2	FSM	ENSMUSG00000116004.2	ENSMUST00000230234.2	511	2	108	126	108	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCACGATCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	85530391	85551750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_85530497_85551578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009372	chr15	+	220	1	ISM	ENSMUSG00000116004.2	ENSMUST00000230234.2	511	2	21371	2	21371	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAAGTGGATCCCCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	85551654	85551874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85551700_85551900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009373	chr15	+	171	2	FSM	ENSMUSG00000116305.2	ENST00000360737.4	168	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACATGGAGGCCCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	85590788	85591620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_85590816_85591476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009374	chr15	+	158	1	FSM	ENSMUSG00000065564.3	ENSMUST00000083630.3	85	1	-57	-16	-57	16	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACATGGAGGCCCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	85591462	85591620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_85591500_85591600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009375	chr15	-	516	1	Genic_Genomic	ENSMUSG00000064284.13	novel	NA	NA	NA	NA	3604	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTTTGAGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	85691687	85691171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_85691200_85691700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009376	chr15	-	692	3	ISM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	1765	-174	1765	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGGGTAAGCAAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	85693526	85691273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_85691740_85692456_85692569_85693412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009377	chr15	+	584	2	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	1952	13983	1952	-13940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCAAGTCAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	85746098	85746791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85746160_85746268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009378	chr15	+	613	2	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	2239	12365	2239	-12322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCCAGTCGAGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	85746385	85748409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85746897_85748307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009379	chr15	+	529	3	ISM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	11569	1374	11569	-1331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCACACGCCATCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	85755715	85759400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85755783_85757840_85758078_85759175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009380	chr15	+	389	1	NIC	ENSMUSG00000022385.12	novel	2692	11	NA	NA	16199	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAGTTTATTAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	85760345	85760734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_85760300_85760700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009381	chr15	+	287	2	ISM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	15	14556	15	-14321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGTGCAGGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	85763535	85767037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85763660_85766874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009382	chr15	+	341	3	ISM	ENSMUSG00000022386.13	ENST00000643137.1	1071	9	2406	4488	2406	-4488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAACAAAAGATTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	85769278	85776870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85769394_85774405_85774529_85776767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009383	chr15	+	309	3	ISM	ENSMUSG00000022386.13	ENST00000643137.1	1071	9	7546	3306	7546	-3306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACTTGGAGCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	85774418	85778052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85774529_85776767_85776941_85778026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009384	chr15	+	316	2	ISM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	17516	134	14164	101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGAAGGAGGGTCTACG	NA	NA	NA	NA	NA	NA	NA	NA	85781036	85781459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85781119_85781225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009385	chr15	+	281	1	ISM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	17792	0	14440	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTGTCTGGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	85781312	85781593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_85781300_85781600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009386	chr15	+	1853	4	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	152144	140	152123	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGTGCAAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	86250803	86382564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_86250882_86275277_86275406_86333392_86333489_86381013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009387	chr15	+	1625	1	ISM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	282420	0	282399	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	86381079	86382704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_86381100_86382700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009388	chr15	+	1912	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	160	531	160	-529	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCAGCATACTACCTACA	NA	NA	NA	NA	NA	NA	NA	NA	87509590	87643034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009389	chr15	+	1563	1	ISM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	132572	0	132572	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGCTTTTGTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	87642002	87643565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_87642000_87643600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009390	chr15	+	508	4	FSM	ENSMUSG00000023272.5	ENST00000403427.3	503	4	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAGAAGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	88706163	88709493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_88706339_88707269_88707366_88708850_88708947_88709352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009391	chr15	+	239	3	NNC	ENSMUSG00000023272.5	novel	503	4	NA	NA	122	-544	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCAGTGAGCTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	88706285	88708944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_88706339_88707269_88707362_88708850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009392	chr15	+	293	3	ISM	ENSMUSG00000023272.5	ENST00000403427.3	503	4	1087	54	1087	-54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTCCGGAAGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	88707250	88709434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_88707366_88708850_88708947_88709352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009393	chr15	+	337	3	NNC	ENSMUSG00000023272.5	novel	503	4	NA	NA	1102	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGAGTGGCAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88707265	88709489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_88707366_88708850_88708951_88709352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009394	chr15	+	258	3	NNC	ENSMUSG00000023272.5	novel	503	4	NA	NA	1169	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGAGTGGCAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88707332	88709489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_88707366_88708850_88708939_88709352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009395	chr15	+	257	3	NNC	ENSMUSG00000023272.5	novel	503	4	NA	NA	1174	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGAGTGGCAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88707337	88709489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_88707362_88708850_88708947_88709352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009396	chr15	+	232	2	NNC	ENSMUSG00000023272.5	novel	503	4	NA	NA	2686	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGAGTGGCAGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88708849	88709489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_88708951_88709358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009397	chr15	+	146	1	NIC	ENSMUSG00000023272.5	novel	1366	10	NA	NA	3181	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGAGTGGCAGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	88709344	88709490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_88709300_88709500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009398	chr15	+	2718	3	FSM	ENSMUSG00000058441.8	ENSMUST00000162424.2	3391	3	392	281	65	-278	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGTGTGCGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	88944341	88954829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_88944503_88951760_88953225_88953736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009399	chr15	+	1659	3	ISM	ENSMUSG00000058441.8	ENST00000395842.3	2983	4	8582	0	8582	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGCCTTGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	88952858	88955107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_88953225_88953736_88954829_88954906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009400	chr15	+	131	1	ISM	ENSMUSG00000058441.8	ENSMUST00000162424.2	3391	3	11027	3	10700	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGCCTTGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	88954976	88955107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_88955000_88955100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009401	chr15	-	493	3	FSM	ENSMUSG00000087331.9	ENSMUST00000162579.8	544	3	51	0	51	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCATGGTGTCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	88958449	88955398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_88955540_88955773_88955952_88958275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009402	chr15	+	1025	4	ISM	ENSMUSG00000015363.14	ENSMUST00000165690.2	1941	10	8881	-324	8881	324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCCTGCAGAGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	88969207	88970660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_88969246_88969476_88969650_88969728_88969841_88969958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009403	chr15	+	749	1	Genic_Genomic	ENSMUSG00000015363.14	novel	NA	NA	NA	NA	10206	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTGTGAAGTGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	88970532	88971281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_88970500_88971300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009404	chr15	-	174	2	ISM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	5049	86	4668	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCGAACCATGGCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	89007854	89007595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89007683_89007767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009405	chr15	-	183	2	ISM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	4764	353	4383	-88	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTTTCTCGAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	89008139	89007862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89007928_89008021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009406	chr15	-	191	2	ISM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	3073	2030	2692	491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGATGGAATCATGGATG	NA	NA	NA	NA	NA	NA	NA	NA	89009830	89009539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89009600_89009699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009407	chr15	-	191	3	ISM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	1767	3071	1386	-550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAACATGGCCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	89011136	89010580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89010641_89010843_89010910_89011071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009408	chr15	-	179	2	ISM	ENSMUSG00000062906.13	ENST00000349505.4	957	10	627	1583	627	-1583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGAAATATGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89011895	89011613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89011694_89011796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009409	chr15	-	466	5	ISM	ENSMUSG00000022610.11	ENST00000395780.5	884	9	5601	-1	5601	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGGGGTTCCATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	89018871	89016693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009410	chr15	-	465	5	ISM	ENSMUSG00000022610.11	ENST00000395780.5	884	9	11	2120	11	-2120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGCTATCCAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	89024461	89018814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89018930_89019325_89019374_89019779_89019892_89021603_89021663_89024330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009411	chr15	-	1510	2	ISM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	5314	-5	5314	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGATCCCATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	89028517	89026684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89028021_89028343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009412	chr15	+	1481	1	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	6162	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCATTACAAATACCATG	NA	NA	NA	NA	NA	NA	NA	NA	89143399	89144880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_89143400_89144900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009413	chr15	-	871	5	ISM	ENSMUSG00000022614.9	ENST00000474879.7	2227	14	2764	0	2764	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCTGCCAGGGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	89236901	89235692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009414	chr15	+	340	3	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	15	9351	15	-9351	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCAAGAGGTGAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	89239953	89247678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_89240147_89244558_89244661_89247633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009415	chr15	+	286	3	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	8028	8604	8028	-8604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTCAAGGAGCCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	89247966	89248425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_89248038_89248124_89248205_89248290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009416	chr15	+	392	4	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	8369	3371	8369	-3371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAATGTGAGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	89248307	89253658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_89248446_89248815_89248900_89249436_89249535_89253586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009417	chr15	+	233	3	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	13877	2747	13877	-2747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTAGGGTCCTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	89253815	89254282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_89253886_89254010_89254119_89254227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009418	chr15	+	1440	3	ISM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	15208	276	15208	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCAGGTTATCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	89255146	89256753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_89255197_89255296_89255447_89255513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009419	chr15	+	1270	1	Genic_Genomic	ENSMUSG00000008690.16	novel	NA	NA	NA	NA	15823	2	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGATCCTCTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	89255761	89257031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_89255800_89257000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009420	chr15	-	1123	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	23	-1	23	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATGTGCTCTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	89257998	89255838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_89256669_89257625_89257806_89257885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009421	chr15	-	987	2	FSM	ENSMUSG00000091780.4	ENST00000543927.6	986	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGAACTATACCTATT	NA	NA	NA	NA	NA	NA	NA	NA	89258345	89255892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_89256669_89258134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009422	chr15	-	778	1	NIC	ENSMUSG00000091780.4	novel	1145	3	NA	NA	1351	1	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGAACTATACCTATT	NA	NA	NA	NA	NA	NA	NA	NA	89256670	89255892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_89255900_89256700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009423	chr15	-	673	2	FSM	ENSMUSG00000091780.4	ENSMUST00000228977.2	1250	2	56	521	28	-470	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAAAGGCCAGCCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	89257993	89256363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_89256669_89257625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009424	chr15	-	369	3	ISM	ENSMUSG00000047394.10	ENSMUST00000227834.2	930	4	485	282	485	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTGGAGTCGAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	89262643	89261934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89262076_89262302_89262425_89262537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009425	chr15	-	142	1	NIC	ENSMUSG00000047394.10	novel	1040	5	NA	NA	1051	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTCTGGAGTCGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	89262077	89261935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_89261900_89262100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009426	chr15	-	357	3	ISM	ENSMUSG00000047394.10	ENST00000403326.5	503	4	9	364	9	-364	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGAAGGGTCTGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	89263402	89262302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89262425_89262537_89262643_89263272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009427	chr15	-	1514	8	ISM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	1519	0	-19	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAAGGGTCTCAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	89474607	89466735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009428	chr15	-	900	1	NIC	ENSMUSG00000022621.17	novel	1640	9	NA	NA	6953	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAAGGGTCTCAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	89467635	89466735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_89466700_89467600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009429	chr15	-	452	5	ISM	ENSMUSG00000022621.17	ENST00000393166.7	594	7	3392	-1	3392	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCGGGCCCCATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	89471196	89467800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89467886_89468112_89468208_89468481_89468594_89470461_89470542_89471116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009430	chr15	-	407	5	FSM	ENSMUSG00000022621.17	ENST00000376439.3	405	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCGGGCCCCATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	89474589	89467800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_89467886_89468112_89468211_89471116_89471197_89472390_89472421_89474475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009431	chr15	-	260	3	NIC	ENSMUSG00000022621.17	novel	594	7	NA	NA	3392	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCGGGCCCCATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	89471196	89467800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_89467886_89468112_89468208_89471116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009432	chr15	-	177	2	NNC	ENSMUSG00000022621.17	novel	405	5	NA	NA	6377	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCGGGCCCCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	89468211	89467801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_89467886_89468118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009433	chr15	-	205	3	NIC	ENSMUSG00000022621.17	novel	594	7	NA	NA	2168	-311	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCAGCCCTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89472420	89468112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_89468208_89471116_89471197_89472390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009434	chr15	-	453	6	ISM	ENSMUSG00000022621.17	ENST00000393166.7	594	7	57	311	57	-311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCAGCCCTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89474531	89468112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_89468208_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009435	chr15	-	276	3	NNC	ENSMUSG00000022621.17	novel	405	5	NA	NA	43	-311	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCAGCCCTGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89474545	89468112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_89468211_89471116_89471225_89474475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009436	chr15	-	644	4	FSM	ENSMUSG00000052560.16	ENSMUST00000014777.9	697	4	58	-5	58	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTGTTGTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	90563533	90527523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_90527917_90532780_90532828_90533445_90533487_90563370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009437	chr15	-	390	1	NIC	ENSMUSG00000052560.16	novel	697	4	NA	NA	35673	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	90527918	90527528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_90527500_90527900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009438	chr15	-	510	2	Antisense	novelGene_ENSMUSG00000067869.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGCCACAGCGGACGGGA	NA	NA	NA	NA	NA	NA	NA	NA	90767365	90766795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_-_90766882_90766941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009439	chr15	-	457	1	Genic_Genomic	ENSMUSG00000022629.18	novel	NA	NA	NA	NA	64327	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTCTTTTTCTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	90817934	90817477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_90817500_90817900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009440	chr15	-	582	1	FSM	ENSMUSG00000116093.2	ENSMUST00000230077.2	1240	1	965	-307	965	307	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACGTGTTCAGAAACAACT	NA	NA	NA	NA	NA	NA	NA	NA	91924514	91923932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_91923900_91924500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009441	chr15	-	573	1	ISM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	51958	0	51958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCATTTTGTTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	93182731	93182158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_93182200_93182700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009442	chr15	-	857	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	12	807	12	-807	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTACTATTGGCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	93234677	93182965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009443	chr15	-	147	1	ISM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	12049	9	12049	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGAATAGTGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	93284133	93283986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_93284000_93284100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009444	chr15	-	208	2	ISM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	10682	49	10649	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTTATTTTGTAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	93285533	93284035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_93284168_93285457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009445	chr15	-	190	2	ISM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	10441	1480	10441	-1471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGACATACTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	93285741	93285457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_93285534_93285627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009446	chr15	-	223	2	ISM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	7140	1651	7140	-1642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTATGTCTGTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	93289042	93285628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_93285741_93288931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009447	chr15	-	225	2	ISM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	6732	4953	6732	-4944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAAACCCAGAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	93289450	93288930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_93289040_93289334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009448	chr15	-	142	2	ISM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	2685	5357	2685	-5348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCATTCATTTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	93293497	93289334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_93289447_93293467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009449	chr15	-	263	3	ISM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	-11	9492	-11	-9483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAGTATTCACATTACA	NA	NA	NA	NA	NA	NA	NA	NA	93296193	93293469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_93293497_93295050_93295137_93296043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009450	chr15	+	305	3	ISM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	64	58523	64	-47593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	93308636	93339596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_93308665_93321894_93321957_93339381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009451	chr15	+	399	3	ISM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	30823	40446	30823	-29516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTAATTTCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	93339395	93357673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_93339594_93353331_93353412_93357552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009452	chr15	+	302	3	ISM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	44759	35032	44759	-24102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAGCCATTGCCTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	93353331	93363087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_93353412_93357552_93357673_93362985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009453	chr15	+	1373	3	ISM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	49033	10100	49033	724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGTCAAAATATGCT	NA	NA	NA	NA	NA	NA	NA	NA	93357605	93388019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_93357673_93362985_93363127_93386854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009454	chr15	+	391	2	ISM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	78280	0	78280	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTACTTGCCACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	93386852	93398119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_93386981_93397856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009455	chr15	+	1275	1	ISM	ENSMUSG00000036167.17	ENSMUST00000049122.16	3573	10	91839	0	79544	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCACTTGGTAGAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	93388116	93389391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_93388100_93389400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009456	chr15	+	267	1	Genic_Genomic	ENSMUSG00000036167.17	novel	NA	NA	NA	NA	89284	4	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTGCCACGGGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	93397856	93398123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_93397900_93398100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009457	chr15	+	2581	3	FSM	ENSMUSG00000116237.2	ENSMUST00000231054.2	2538	3	0	-43	0	43	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAAGTTTGGTGGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	93632293	93636414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_93633860_93634491_93634540_93635447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009458	chr15	-	227	2	ISM	ENSMUSG00000022449.15	ENST00000389420.8	5808	38	121204	9428	121181	-9428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTATGACGACCGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	94180958	94180531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94180627_94180826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009459	chr15	-	263	2	ISM	ENSMUSG00000022449.15	ENST00000389420.8	5808	38	120311	9733	120288	-9733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATGACTGTAAGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	94181851	94180836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94180957_94181708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009460	chr15	-	236	2	ISM	ENSMUSG00000022449.15	ENST00000389420.8	5808	38	117911	12411	117888	-12411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATCTTGGTCTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	94184251	94183514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94183690_94184190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009461	chr15	-	264	2	ISM	ENSMUSG00000022449.15	ENST00000389420.8	5808	38	112658	13087	112635	-13087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGTAATGAGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	94189504	94184190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94184365_94189414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009462	chr15	-	298	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	79437	2486	79437	-2486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGATGTGTCCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	94222702	94220700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94220837_94222540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009463	chr15	-	363	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	78131	4340	78131	-4340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTGGGGAGAAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	94224008	94222554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94222703_94223793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009464	chr15	-	335	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	77788	5700	77788	-5700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCAAGCCACGTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	94224351	94223914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94224085_94224186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009465	chr15	-	261	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	73614	9650	73614	-9650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGAGTCGCTGAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	94228525	94227864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94227962_94228361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009466	chr15	-	272	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	72827	10154	72827	-10154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGAGGTAACATTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	94229312	94228368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94228527_94229198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009467	chr15	-	258	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	58444	23602	58444	-23602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGAGTGTGCTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94243695	94241816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94241937_94243557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009468	chr15	-	314	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	58165	25348	58165	-25348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGGGTAAGTAAACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	94243974	94243562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94243695_94243792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009469	chr15	-	305	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	56467	25578	56467	-25578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAACGCCATTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	94245672	94243792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94243975_94245549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009470	chr15	-	263	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	50591	31301	50591	-31301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAGAAACTCTACCTAT	NA	NA	NA	NA	NA	NA	NA	NA	94251548	94249515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94249658_94251427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009471	chr15	-	237	3	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	41670	40239	41670	-40239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCTTCCGTCCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	94260469	94258453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94258496_94259633_94259759_94260399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009472	chr15	-	271	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	24348	42184	24348	-42184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAGCAAGACACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	94277791	94260398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94260484_94277605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009473	chr15	-	255	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	9577	59445	9577	-59445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACCATCATGGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94292562	94277659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94277845_94292492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009474	chr15	-	269	2	ISM	ENSMUSG00000022449.15	ENSMUST00000155907.2	6886	28	939	74303	939	-74303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACAAGCCTTGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	94301200	94292517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94292656_94301069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009475	chr15	+	1456	2	ISM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	23147	-55	23118	55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAACCAGAGACAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	94464670	94466242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_94464779_94464894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009476	chr15	-	1496	1	Genic_Genomic	ENSMUSG00000022451.13	novel	NA	NA	NA	NA	10434	1	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGTATGTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	94477326	94475830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_94475800_94477300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009477	chr15	-	1832	4	ISM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	7046	565	7046	-565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTGATGGAAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94480714	94476396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009478	chr15	-	1475	3	NNC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	8607	-739	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCAGGACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	94479153	94476570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_94477872_94478824_94478947_94479101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009479	chr15	+	1700	4	ISM	ENSMUSG00000063296.6	ENST00000551577.5	2509	6	241299	394	241299	-394	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTAAATTGCTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	94777260	94993580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_94777362_94829676_94829775_94909196_94909357_94992239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009480	chr15	+	1406	1	ISM	ENSMUSG00000063296.6	ENSMUST00000080141.6	2717	8	465439	4	456608	1	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTAATTGTGTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	94992569	94993975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_94992600_94994000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009481	chr15	-	652	1	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	307594	0	307594	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCATGCGAGCCCGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95117982	95117330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_95117300_95118000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009482	chr15	-	1132	4	ISM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	295066	121	295066	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCACCCCTCCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	95130510	95117451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009483	chr15	+	264	1	FSM	ENSMUSG00000043329.5	ENSMUST00000058951.5	480	1	431	-215	431	215	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCTCTCTTAGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	95674065	95674329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_95674100_95674300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009484	chr15	+	721	1	Genic_Genomic	ENSMUSG00000064210.8	novel	NA	NA	NA	NA	183165	26	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTCTGAAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	95871937	95872658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_95871900_95872700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009485	chr15	+	2968	1	FSM	ENSMUSG00002075367.1	ENSMUST00020183285.1	92	1	-2833	-43	-2833	43	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGATAAGTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	96299905	96302873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_96299900_96302900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009486	chr15	-	1267	1	Genic_Genomic	ENSMUSG00000033228.9	novel	NA	NA	NA	NA	5931	6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAATTTGTTGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	96312797	96311530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_96311500_96312800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009487	chr15	-	1487	3	ISM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	44893	68	4897	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTGAAGTCAGCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	96313831	96311604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96312798_96312912_96313033_96313657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009488	chr15	-	3200	4	ISM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	37	964	37	-964	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCGAGGACAGACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	96318691	96313627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96313829_96314729_96315071_96315952_96317534_96317614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009489	chr15	-	1245	3	ISM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	37281	6099	-2715	-4972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGAAATAATTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	96321443	96317635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96318728_96319826_96319934_96321397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009490	chr15	-	465	1	Genic_Genomic	ENSMUSG00000033228.9	novel	NA	NA	NA	NA	5711	16	mono-exon	FALSE	NA	NA	NA	NA	NA	583	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATATAAAACAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96336233	96335768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_96335800_96336200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009491	chr15	-	575	2	FSM	ENSMUSG00000033228.9	ENST00000395454.6	566	2	-7	-2	-7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATATTAAAATTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	96341951	96335782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_96336232_96341825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009492	chr15	-	1168	1	ISM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	69665	0	69377	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGAGTCTCGTATGATT	NA	NA	NA	NA	NA	NA	NA	NA	96470466	96469298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96469300_96470500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009493	chr15	-	780	1	ISM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	65486	4567	65198	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGGTTTGTTTCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96474645	96473865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96473900_96474600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009494	chr15	-	797	3	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	63109	260	63109	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTTTCATAAATAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	96476734	96474127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96474694_96476410_96476509_96476601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009495	chr15	-	835	2	ISM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	288	47969	288	-10254	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTCCCCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	96539555	96521836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96522051_96538934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009496	chr15	-	2436	1	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	9903	0	9903	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	96587708	96585272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96585300_96587700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009497	chr15	-	2574	3	ISM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	8357	438	8357	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTATATATTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	96589254	96585710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_96588110_96588989_96589088_96589177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009498	chr15	+	2542	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	0	-6	0	6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCACTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97682235	97690579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_97682498_97687783_97687952_97688467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009499	chr15	+	2207	2	ISM	ENSMUSG00000081534.4	ENST00000442892.2	783	3	-15	74	-15	-74	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACGATGTCCCACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	97687773	97690496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_97687952_97688467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009500	chr15	+	676	3	FSM	ENSMUSG00000081534.4	ENST00000442892.2	783	3	5	102	5	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGATGCTGGGTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	97687793	97690468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_97687952_97688467_97688618_97690100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009501	chr15	+	2117	1	Genic_Genomic	ENSMUSG00000081534.4	novel	NA	NA	NA	NA	670	2	mono-exon	FALSE	NA	NA	NA	NA	NA	675	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTTTTTTTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	97688458	97690575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_97688500_97690600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009502	chr15	-	2925	1	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	50961	0	50961	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGCTCTTTGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	97755230	97752305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_97752300_97755200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009503	chr15	-	3171	3	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	49068	298	49068	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGATAGGAGAATCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	97757123	97752603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_97755513_97756669_97756787_97756978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009504	chr15	+	357	3	ISM	ENSMUSG00000052369.9	ENST00000550552.5	685	7	50	2580	50	-2580	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGAACGGCCTCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	97862779	97864978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_97862912_97864127_97864192_97864817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009505	chr15	+	1037	5	ISM	ENSMUSG00000052369.9	ENST00000256686.10	1023	7	2088	-260	2088	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	97864817	97868156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_97864978_97865067_97865152_97865957_97866008_97866489_97866544_97867467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009506	chr15	+	703	5	NNC	ENSMUSG00000052369.9	novel	1023	7	NA	NA	2160	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGGGTGTGGTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	97864889	97867897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_97864978_97865067_97865149_97865957_97866008_97866489_97866544_97867467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009507	chr15	+	935	4	ISM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	2956	0	2337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	97865066	97868156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_97865209_97865957_97866008_97866489_97866544_97867467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009508	chr15	+	378	1	ISM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	5668	0	5049	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	97867778	97868156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_97867800_97868200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009509	chr15	-	581	3	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	27304	-2	27287	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCGAACCCTGAAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	97875251	97873918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_97874068_97874522_97874766_97875062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009510	chr15	-	707	3	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	26678	602	26661	-602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGGCTGAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	97875877	97874522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_97874766_97875062_97875251_97875601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009511	chr15	-	554	3	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	26260	1142	26243	-1142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCCGGTGGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	97876295	97875062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_97875251_97875601_97875891_97876218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009512	chr15	-	536	7	ISM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	19848	6492	19831	-6492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGTATTGTTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	97882707	97880412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009513	chr15	-	2579	5	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	44585	0	44585	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAGGATAAGTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	97946252	97938676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009514	chr15	+	397	3	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	10897	11069	10897	-11069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAGCACCTAGCGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	98017310	98019243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_98017352_98018671_98018862_98019077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009515	chr15	+	437	2	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	23110	145	23110	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTCTCTCTAGTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	98029523	98030167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_98029589_98029795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009516	chr15	+	452	1	ISM	ENSMUSG00000033065.15	ENSMUST00000230445.2	2798	23	39356	0	23467	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGCTCTTGTTATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	98029880	98030332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_98029900_98030300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009517	chr15	-	1094	1	Genic_Genomic	ENSMUSG00000048175.14	novel	NA	NA	NA	NA	9930	1	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCACTTCCAGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	98033610	98032516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_98032500_98033600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009518	chr15	-	1426	4	FSM	ENSMUSG00000048175.14	ENSMUST00000143400.8	2226	4	40	760	-25	317	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCCAGTTAACAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	98063466	98033277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98063351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009519	chr15	-	571	4	FSM	ENSMUSG00000048175.14	ENST00000535055.5	568	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAACAACGATACGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	98043543	98034110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98034337_98039146_98039270_98040531_98040692_98043481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009520	chr15	-	562	4	NNC	ENSMUSG00000048175.14	novel	568	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACAACAACGATACGCC	NA	NA	NA	NA	NA	NA	NA	NA	98043541	98034112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98034337_98039146_98039270_98040531_98040692_98043486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009521	chr15	-	1331	4	FSM	ENSMUSG00000022987.13	ENST00000448928.7	1360	4	30	-1	30	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTCACCATTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98191680	98186256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98187102_98188358_98188473_98190666_98190859_98191500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009522	chr15	-	823	1	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	15784	0	15764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGACGGAATCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	98416361	98415538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98415500_98416400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009523	chr15	-	1250	4	ISM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	7617	1075	7597	75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGCACTCTGGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98424528	98416613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009524	chr15	-	818	2	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	13819	-15	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTAAAATGCTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	98418306	98416716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98417423_98418194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009525	chr15	-	892	4	ISM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	4	12502	4	-12502	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTGTAACTCCACATA	NA	NA	NA	NA	NA	NA	NA	NA	98432121	98429203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98429319_98429600_98429780_98431398_98431658_98431782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009526	chr15	-	1172	1	ISM	ENSMUSG00000011960.13	ENSMUST00000169707.8	7397	10	31063	0	27776	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTTGTATGTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	98437741	98436569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98436600_98437700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009527	chr15	-	1248	3	ISM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	20740	373	20740	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCCCCCTTCCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	98444777	98441464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98442490_98444404_98444476_98444625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009528	chr15	-	1341	3	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	11064	-677	11064	677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCTGGCAGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98491548	98489347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98490357_98490553_98490679_98491341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009529	chr15	-	202	2	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	10321	1400	10321	-1400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTGACTATGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	98492291	98491424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98491547_98492211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009530	chr15	-	162	2	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	9726	2382	9726	-2382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGACGTGGCCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	98492886	98492406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98492476_98492793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009531	chr15	-	172	2	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	7764	4434	7764	-4434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGGGACTGGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	98494848	98494458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98494557_98494774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009532	chr15	-	156	2	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	6245	5954	6245	-5954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCGGCCTATGGGACG	NA	NA	NA	NA	NA	NA	NA	NA	98496367	98495978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98496005_98496237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009533	chr15	-	207	2	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	5967	6278	5967	-6278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCGCTGGGTTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	98496645	98496302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98496367_98496502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009534	chr15	-	167	2	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	5795	6532	5795	-6532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGGAGCAGTGCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	98496817	98496556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98496645_98496738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009535	chr15	-	164	2	ISM	ENSMUSG00000022994.10	ENSMUST00000228566.2	3707	21	3703	8327	3703	-8327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAAGACATCAACACA	NA	NA	NA	NA	NA	NA	NA	NA	98498909	98498351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98498398_98498791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009536	chr15	+	848	3	ISM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	7202	673	7202	-673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCAGGATCACTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	98540187	98541737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_98540286_98540382_98540533_98541137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009537	chr15	+	628	1	ISM	ENSMUSG00000003352.15	ENSMUST00000109150.9	2513	13	11526	0	8797	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	98541782	98542410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_98541800_98542400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009538	chr15	-	700	1	ISM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	17056	0	12602	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCAGCCCCGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	98543714	98543014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98543000_98543700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009539	chr15	-	933	3	ISM	ENSMUSG00000003360.16	ENST00000552545.1	2454	16	11199	-460	11199	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATGCCACGGGCGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98545117	98543214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98543899_98544224_98544400_98545043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009540	chr15	-	716	4	ISM	ENSMUSG00000003360.16	ENST00000552545.1	2454	16	8150	1679	8150	-1679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGGGAGGCTGAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	98548166	98545353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98545507_98546367_98546611_98547595_98547774_98548024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009541	chr15	-	570	2	ISM	ENSMUSG00000054855.14	ENSMUST00000109149.9	1034	5	4859	-9	4857	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGGGCTGGCGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	98570482	98561292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98561772_98570391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009542	chr15	-	1776	2	ISM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	4814	-1	4811	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAGCAGCGCTCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	98570528	98567084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98568724_98570391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009543	chr15	-	342	3	ISM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	1263	-2	1263	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGTATTTTTCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	98624816	98622248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98622484_98624364_98624436_98624780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009544	chr15	-	244	1	Genic_Genomic	ENSMUSG00000003355.8	novel	NA	NA	NA	NA	3587	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGTATTTTTCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	98622492	98622248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_98622200_98622500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009545	chr15	-	415	4	ISM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	15	2530	15	-2530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCTGAAGGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	98626064	98624780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98624815_98625091_98625180_98625563_98625630_98625837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009546	chr15	-	2161	1	Genic_Genomic	ENSMUSG00000051853.11	novel	NA	NA	NA	NA	24381	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCCTTTTCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98636674	98634513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_98634500_98636700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009547	chr15	-	1266	2	NNC	ENSMUSG00000051853.11	novel	3430	6	NA	NA	23640	-532	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTGTACATTGCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	98637415	98636021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98636321_98636448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009548	chr15	-	2166	2	ISM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	22190	1726	22153	-751	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTCTCTCTGCCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	98638902	98636240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98638376_98638871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009549	chr15	-	1705	5	FSM	ENSMUSG00000022996.16	ENST00000407467.5	1705	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTATTTTACTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	98674870	98669705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98670816_98672004_98672066_98672207_98672379_98674398_98674662_98674770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009550	chr15	+	765	3	FSM	ENSMUSG00000097414.3	ENST00000552284.1	764	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTCCTCAGCTTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	98704826	98729332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_98705106_98716609_98716709_98728945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009551	chr15	-	174	1	FSM	ENSMUSG00000115980.2	ENSMUST00000230986.2	285	1	111	0	111	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCCGGCGGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	98770383	98770209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98770200_98770400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009552	chr15	-	106	1	ISM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	14204	5	14180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGAGCTTGTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98801908	98801802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98801800_98801900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009553	chr15	-	170	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	13458	502	13458	-502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGAGAGAACTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	98802630	98802304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98802390_98802545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009554	chr15	-	157	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	12226	814	12226	-814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCACCACACTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	98803862	98802616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98802708_98803796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009555	chr15	-	136	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	11873	2016	11873	-2016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTTCTCTAGAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	98804215	98803818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98803864_98804124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009556	chr15	-	160	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	10259	2327	10259	-2327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGTACCCAGCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	98805829	98804129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98804216_98805755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009557	chr15	-	142	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	9621	3975	9621	-3975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACTGGCTCAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	98806467	98805777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98805853_98806400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009558	chr15	-	143	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	9451	4613	9451	-4613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGCTGACGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	98806637	98806415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98806478_98806556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009559	chr15	-	141	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	9302	4754	9302	-4754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGCCTGGTAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	98806786	98806556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98806641_98806729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009560	chr15	-	116	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	8939	4950	8939	-4950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTGACTCGAAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	98807149	98806752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98806803_98807083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009561	chr15	-	133	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	8750	5283	8750	-5283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTATGTAGTATGTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	98807338	98807085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98807149_98807268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009562	chr15	-	155	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	6626	5466	6626	-5466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTCAGAATCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	98809462	98807268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98807338_98809376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009563	chr15	-	206	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	5959	7600	5959	-7600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCAGCAGGGAGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	98810129	98809402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98809504_98810024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009564	chr15	-	163	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	5701	8272	5701	-8272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCATATTTCTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	98810387	98810074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98810129_98810278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009565	chr15	-	124	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	4614	8529	4614	-8529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTGCCACGCAACTACT	NA	NA	NA	NA	NA	NA	NA	NA	98811474	98810331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98810419_98811437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009566	chr15	-	105	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	2986	9649	2986	-9649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAAGATTGCGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	98813102	98811451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98811472_98813017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009567	chr15	-	160	2	ISM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	264	11234	264	-11234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAGTTCACCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	98815824	98813036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98813103_98815730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009568	chr15	-	1755	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	-8	-4	-8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATACTTTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	98832454	98829301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009569	chr15	-	1738	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTGGATACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	98832449	98829304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98830435_98830572_98830722_98830853_98831077_98832213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009570	chr15	-	1729	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832444	98829305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98830444_98830572_98830722_98830853_98831077_98832225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009571	chr15	-	1737	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832446	98829305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98830444_98830572_98830716_98830853_98831077_98832213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009572	chr15	-	1748	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832447	98829305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98830444_98830572_98830722_98830853_98831077_98832209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009573	chr15	-	1736	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832445	98829305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98830444_98830572_98830722_98830853_98831071_98832213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009574	chr15	-	1735	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832440	98829305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98830444_98830572_98830722_98830853_98831071_98832209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009575	chr15	-	1736	4	NNC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98832446	98829305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98830444_98830572_98830722_98830860_98831077_98832213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009576	chr15	-	842	1	ISM	ENSMUSG00000072235.7	ENST00000679733.1	1701	4	2898	0	2898	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2784	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCAGCTTTCATGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	98848532	98847690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98847700_98848500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009577	chr15	-	1718	4	FSM	ENSMUSG00000072235.7	ENST00000552924.2	1731	4	14	-1	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGTGTTCTATATT	NA	NA	NA	NA	NA	NA	NA	NA	98851416	98847717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009578	chr15	+	920	2	Antisense	novelGene_ENSMUSG00000072235.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGACGTCAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	98848130	98849224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_+_98848898_98849071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009579	chr15	-	1078	3	NNC	ENSMUSG00000072235.7	novel	1803	4	NA	NA	1857	-463	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGTGGTGACCTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	98849573	98848181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98848887_98849068_98849218_98849349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009580	chr15	-	748	3	NNC	ENSMUSG00000072235.7	novel	1803	4	NA	NA	1924	-729	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTCTGCTGAGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	98849506	98848447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_98848896_98849068_98849212_98849349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009581	chr15	-	1035	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	0	768	0	-767	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCGTATCCACTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	98851584	98848485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009582	chr15	-	598	3	ISM	ENSMUSG00000072235.7	ENST00000679733.1	1701	4	1857	1005	1857	-977	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACCCTGGAGCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	98849573	98848695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_98848896_98849068_98849218_98849324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009583	chr15	+	1963	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	23	-4	23	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATCTGGTTCATAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	98927794	98935995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009584	chr15	-	1204	2	Antisense	novelGene_ENSMUSG00000043091.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGCCGGTGCGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	98935994	98932352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_-_98932476_98934913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009585	chr15	+	406	3	ISM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	51664	26973	51664	-26973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTTTGCCGAATTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	99076332	99083951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_99076447_99078461_99078642_99083839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009586	chr15	+	486	2	ISM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	84154	663	84154	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCTCCCATCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	99108822	99110261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_99108978_99109930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009587	chr15	+	385	1	ISM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	86275	0	86043	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	99110711	99111096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_99110700_99111100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009588	chr15	-	142	1	ISM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	8994	9	8978	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGTAGCTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	99140848	99140706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99140700_99140800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009589	chr15	-	172	2	ISM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	8513	338	8513	-338	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGCTGCCAAGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	99141313	99141044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99141102_99141198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009590	chr15	-	248	2	ISM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	1942	6561	1942	-6561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTAGTGAGAAGAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	99147884	99147267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99147388_99147756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009591	chr15	-	171	2	ISM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	28	7074	28	-7074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAACGCAGAAGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	99149798	99147780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99147896_99149742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009592	chr15	-	1120	1	Genic_Genomic	ENSMUSG00000023008.19	novel	NA	NA	NA	NA	52108	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCACCAAGCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	99216222	99215102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_99215100_99216200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009593	chr15	+	1300	5	ISM	ENSMUSG00000023010.16	ENSMUST00000159531.3	939	10	12248	-806	12248	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGTTTTGGTCTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	99303738	99307297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009594	chr15	+	999	1	Genic_Genomic	ENSMUSG00000023010.16	novel	NA	NA	NA	NA	15442	1	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTCTCAGTGTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	99306932	99307931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_99306900_99307900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009595	chr15	-	602	1	ISM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	4050	0	4050	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTCGTTTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	99368561	99367959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99368000_99368600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009596	chr15	-	671	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	46	559	46	-559	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGAGGTGACATGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	99372565	99368518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_99368961_99372336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009597	chr15	+	1799	4	FSM	ENSMUSG00000044217.18	ENSMUST00000169082.3	1797	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCTCCCTCCAAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	99488662	99492712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_99489516_99490542_99490708_99491126_99491211_99492015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009598	chr15	+	1789	4	FSM	ENSMUSG00000044217.18	ENSMUST00000229728.2	1415	4	-366	-8	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTCCCTCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99488665	99492710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_99489516_99490547_99490708_99491126_99491211_99492015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009599	chr15	+	1787	4	NNC	ENSMUSG00000044217.18	novel	1797	4	NA	NA	4	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTCCCTCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99488666	99492710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_99489516_99490542_99490702_99491126_99491211_99492015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009600	chr15	+	1760	4	NNC	ENSMUSG00000044217.18	novel	1797	4	NA	NA	22	-11	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAATCTTCATATTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	99488684	99492691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_99489516_99490542_99490712_99491126_99491211_99492015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009601	chr15	+	1735	4	NNC	ENSMUSG00000044217.18	novel	1797	4	NA	NA	-14	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTCCCTCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99488715	99492710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_99489516_99490542_99490708_99491126_99491215_99492028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009602	chr15	+	1726	4	NNC	ENSMUSG00000044217.18	novel	1376	5	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTGCCTTCATCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	99488729	99492702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_99489516_99490542_99490708_99491126_99491215_99492015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009603	chr15	+	503	1	ISM	ENSMUSG00000044217.18	ENSMUST00000169082.3	1797	4	3538	7	3086	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCCTTCATCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	99492200	99492703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_99492200_99492700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009604	chr15	-	802	1	Genic_Genomic	ENSMUSG00000023015.15	novel	NA	NA	NA	NA	30347	1	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGGTTTTCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	99519177	99518375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_-_99518400_99519200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009605	chr15	-	1163	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	27582	171	27582	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTGTGAAACAGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	99521942	99518547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009606	chr15	-	573	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	25258	3066	25258	-3065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCGACCGAGTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	99524266	99521442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99521574_99521807_99521941_99522118_99522225_99524063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009607	chr15	-	545	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	25085	3421	25085	-3420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGCACACACAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	99524439	99521797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99521941_99522118_99522225_99524063_99524263_99524342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009608	chr15	-	399	3	NNC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	25084	-3741	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTACAGCGGATGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	99524440	99522118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_99522225_99524063_99524259_99524342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009609	chr15	-	593	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	20402	5687	20402	-5686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGGCAGAACTTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	99529122	99524063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99524263_99524342_99524439_99526514_99526680_99528989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009610	chr15	-	452	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	18892	8137	18892	-8136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATCATGGCAGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	99530632	99526513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99526680_99528989_99529121_99529960_99530079_99530595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009611	chr15	-	412	5	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	15440	10657	15440	-10656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATACTGGAGGCATGCGC	NA	NA	NA	NA	NA	NA	NA	NA	99534084	99529033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009612	chr15	-	504	4	ISM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	8671	15635	8671	-15634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAACATTTGATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	99540853	99534011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99534083_99535518_99535656_99537494_99537701_99540763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009613	chr15	-	430	3	ISM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	14	19118	1	-19118	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGCATTGCTTTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	99549523	99537495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99537701_99540763_99540853_99549387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009614	chr15	-	386	1	FSM	ENSMUSG00000115938.2	ENSMUST00000230504.2	252	1	-33	-101	-33	101	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAATTTACTGAGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	99604727	99604341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_99604300_99604700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009615	chr15	+	1350	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	0	740	0	-740	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGCCATCATCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	99623527	99626673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_99623730_99625525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009616	chr15	+	1176	1	Genic_Genomic	ENSMUSG00000023020.4	novel	NA	NA	NA	NA	2711	1	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGATGTATGAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	99626238	99627414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_99626200_99627400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009617	chr15	-	2236	1	ISM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	39438	0	39438	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	99678586	99676350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99676400_99678600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009618	chr15	-	1230	3	ISM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	25633	1827	25633	-1827	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGCCGCCATGGTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	99692391	99678177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_99679172_99681400_99681535_99692289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009619	chr15	+	1899	4	ISM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	24252	0	24252	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	100149951	100159125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_100150081_100151974_100152155_100152234_100152395_100157695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009620	chr15	+	1432	1	NIC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	31994	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	100157693	100159125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_100157700_100159100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009621	chr15	+	219	1	FSM	ENSMUSG00000116182.2	ENSMUST00000230632.2	281	1	257	-195	257	195	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGTGGGTGTACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	100195308	100195527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_100195300_100195500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009622	chr15	+	1944	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTGCATTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	100202643	100212236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_100203226_100210874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009623	chr15	-	1468	3	ISM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	25242	0	25189	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTCTAGGGGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	100295694	100285778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_100287043_100293150_100293205_100295544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009624	chr15	+	1349	3	ISM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	6466	290	6394	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTACTTTCCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	100373381	100376754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_100373536_100374670_100374768_100375656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009625	chr15	+	1137	1	Genic_Genomic	ENSMUSG00000037353.10	novel	NA	NA	NA	NA	8922	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGAATTACTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	100375909	100377046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_100375900_100377000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009626	chr15	-	879	2	FSM	ENSMUSG00000097093.3	ENSMUST00000181034.3	881	2	6	-4	6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTATTTACATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100512985	100512013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_100512572_100512664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009627	chr15	+	2137	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCATTCTTTACTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	100513228	100518643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009628	chr15	+	2124	4	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	100513236	100518642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_100513619_100514810_100514913_100515805_100516052_100517248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009629	chr15	+	2103	4	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	100513266	100518642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_100513611_100514793_100514913_100515805_100516052_100517248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009630	chr15	+	877	4	FSM	ENSMUSG00000000346.10	ENST00000549555.5	870	4	0	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAAATTATTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	100513508	100517740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_100513606_100514793_100514913_100515805_100515975_100517248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009631	chr15	+	790	3	NNC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	1283	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCAAATTATTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	100514791	100517740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_100514913_100515805_100515983_100517248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009632	chr15	-	623	3	FSM	ENSMUSG00000053559.14	ENST00000603864.5	622	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGCCTTGATAAGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	100528647	100519532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_100519908_100520509_100520630_100528519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009633	chr15	-	376	1	NIC	ENSMUSG00000053559.14	novel	1135	4	NA	NA	8738	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGCCTTGATAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	100519909	100519533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_100519500_100519900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009634	chr15	+	439	3	FSM	ENSMUSG00000023032.13	ENSMUST00000161564.2	445	3	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTTTGGCTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	100659755	100672965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_100659856_100672510_100672593_100672708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009635	chr15	+	1154	3	ISM	ENSMUSG00000023034.8	ENST00000243050.5	2649	8	29	3828	-10	-3828	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGTATTTTGTTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	101164716	101168845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_101164853_101165608_101165745_101167963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009636	chr15	+	1306	4	ISM	ENSMUSG00000023034.8	ENST00000243050.5	2649	8	920	2488	881	-2488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTCTTGCCCGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	101165607	101170185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_101165745_101167963_101168851_101169616_101169747_101170033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009637	chr15	+	1337	4	ISM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	5305	-1	5305	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTTTTTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101170031	101172677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_101170186_101170598_101170802_101170895_101171075_101171876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009638	chr15	+	1274	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTGGCCTGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	101182149	101188827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_101182427_101184813_101185132_101188148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009639	chr15	-	611	4	ISM	ENSMUSG00000048699.5	ENST00000549264.2	707	6	51450	-2	3694	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGCAGGTGGGTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	101467691	101463703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101463916_101464668_101464907_101466735_101466832_101467626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009640	chr15	-	478	4	ISM	ENSMUSG00000048699.5	ENST00000549264.2	707	6	50207	963	2451	-963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGACCAATATCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	101468934	101464668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101464907_101466735_101466832_101467626_101467688_101468851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009641	chr15	-	101	2	ISM	ENSMUSG00000022986.6	ENST00000252245.6	2137	8	5893	646	5893	-646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGTGGGAACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	101476389	101473487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101473553_101476353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009642	chr15	-	106	2	ISM	ENSMUSG00000022986.6	ENST00000252245.6	2137	8	2760	5879	2760	-5879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCTCTCCATGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	101479522	101478720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101478760_101479455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009643	chr15	-	107	2	ISM	ENSMUSG00000022986.6	ENST00000252245.6	2137	8	475	8365	475	-8365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTAGGACAGTCAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	101481807	101481206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101481272_101481765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009644	chr15	-	518	3	ISM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	4950	0	4950	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGAGGTGGCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	101721590	101719701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101720102_101720188_101720224_101721507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009645	chr15	-	879	5	ISM	ENSMUSG00000049382.11	ENST00000557533.2	1128	8	2689	-116	2689	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGGCCAACCTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	101907373	101905260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009646	chr15	-	196	1	NIC	ENSMUSG00000049382.11	novel	1958	9	NA	NA	4490	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCCACTGAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	101905572	101905376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_101905400_101905600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009647	chr15	-	243	2	ISM	ENSMUSG00000049382.11	ENST00000557533.2	1128	8	2099	1849	2099	-1131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTACCAGATTAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	101907963	101907225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101907371_101907865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009648	chr15	-	262	2	ISM	ENSMUSG00000049382.11	ENST00000557533.2	1128	8	10	3638	10	-2920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGTCTGGGGGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	101910052	101909014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_101909076_101909851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009649	chr15	+	2358	5	ISM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	19225	0	19134	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	102001432	102005608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009650	chr15	+	454	3	ISM	ENSMUSG00000023046.7	ENSMUST00000023807.7	1112	4	328	1285	328	-1285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGAAGCTGCCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	102053124	102056661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102053320_102056279_102056414_102056536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009651	chr15	+	203	2	NNC	ENSMUSG00000023046.7	novel	1112	4	NA	NA	3512	-1304	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACCGAAAGCAGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	102056308	102056642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_102056406_102056536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009652	chr15	+	404	3	ISM	ENSMUSG00000023046.7	ENSMUST00000023807.7	1112	4	3542	126	3542	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGACCCACCTTCACGC	NA	NA	NA	NA	NA	NA	NA	NA	102056338	102057820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102056414_102056536_102056660_102057614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009653	chr15	+	234	1	Genic_Genomic	ENSMUSG00000023046.7	novel	NA	NA	NA	NA	4918	2	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGCGTCTGTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	102057714	102057948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_102057700_102057900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009654	chr15	-	647	1	ISM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	11413	0	11330	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	102086080	102085433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102085400_102086100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009655	chr15	-	656	2	ISM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	10440	224	10357	96	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCTGGATATGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	102087053	102085657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102086222_102086961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009656	chr15	+	295	2	ISM	ENSMUSG00000046897.18	ENST00000416904.5	1825	7	1	8758	1	-7951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAAAGAACGGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	102112121	102113184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102112238_102113005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009657	chr15	+	422	3	ISM	ENSMUSG00000046897.18	ENST00000416904.5	1825	7	1017	5145	94	-4338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAATGGGGAAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	102113137	102116797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102113319_102116205_102116356_102116706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009658	chr15	+	286	3	NNC	ENSMUSG00000046897.18	novel	1825	7	NA	NA	3249	-3819	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTTCCGCACGTC	NA	NA	NA	NA	NA	NA	NA	NA	102116292	102117316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_102116356_102116706_102116801_102117187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009659	chr15	+	315	3	NNC	ENSMUSG00000046897.18	novel	744	5	NA	NA	3686	-3426	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCCCCGTCACCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	102116729	102117709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_102116801_102117187_102117312_102117589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009660	chr15	+	382	3	ISM	ENSMUSG00000046897.18	ENSMUST00000230867.2	744	5	4243	-102	4212	102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCAGGTTAGCAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	102117255	102121237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102117312_102117589_102117709_102121030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009661	chr15	+	229	1	ISM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	9636	2093	8675	5	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGCACAGTTGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	102121718	102121947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102121700_102121900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009662	chr15	-	621	1	ISM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	21959	0	10942	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGTGGATCCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	102143993	102143372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102143400_102144000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009663	chr15	-	1551	3	ISM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	6973	30	6973	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTGCAAAATAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	102147962	102143404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102144659_102147239_102147399_102147824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009664	chr15	+	1589	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	-8	173	-8	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACCCACCTACCCATG	NA	NA	NA	NA	NA	NA	NA	NA	102187880	102190016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102188065_102188611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009665	chr15	+	1447	1	Genic_Genomic	ENSMUSG00000045665.6	novel	NA	NA	NA	NA	855	1	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCCTCTCCTGTACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	102188743	102190190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_102188700_102190200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009666	chr15	+	460	5	ISM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	1	3056	1	-2532	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTGCCTAGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	102234551	102237252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009667	chr15	+	933	5	FSM	ENSMUSG00000001285.13_ENSMUSG00000001289.13	ENST00000549759.2	545	5	0	-388	0	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTAACATTGCCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	102234562	102240198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102234696_102234867_102234971_102236931_102237032_102237146_102237253_102239707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009668	chr15	+	579	5	ISM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	315	340	40	71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAGTGCCCAGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	102234865	102239968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009669	chr15	+	479	3	NNC	ENSMUSG00000001289.13	novel	830	4	NA	NA	2131	112	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACACGGCCTTATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	102236956	102240009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_102237032_102237150_102237253_102239707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009670	chr15	+	516	1	Genic_Genomic	ENSMUSG00000001285.13_ENSMUSG00000001289.13	novel	NA	NA	NA	NA	-346	5	mono-exon	FALSE	NA	NA	NA	NA	NA	650	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACGCACAACGGCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	102239797	102240313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_102239800_102240300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009671	chr15	+	1429	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	51	0	-39	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCTAGGAGTACATAAC	NA	NA	NA	NA	NA	NA	NA	NA	102240194	102246574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009672	chr15	+	425	4	ISM	ENSMUSG00000001285.13	ENST00000548632.5	893	6	39	659	39	-659	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTTCTGCAAAGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	102240272	102245571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009673	chr15	+	419	3	ISM	ENSMUSG00000001285.13	ENST00000548632.5	893	6	2450	284	2450	-284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCCCCACAGAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	102242683	102245946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102242797_102245535_102245659_102245763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009674	chr15	+	386	3	NNC	ENSMUSG00000001285.13	novel	893	6	NA	NA	5375	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCACCTGTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102245608	102246228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_102245659_102245767_102245946_102246070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009675	chr15	+	396	2	ISM	ENSMUSG00000001280.14	ENST00000426431.2	7375	6	39	27900	39	-24191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGCTACCCCCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	102316244	102316923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102316368_102316650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009676	chr15	+	464	3	ISM	ENSMUSG00000001280.14	ENSMUST00000163709.8	3134	6	3175	2637	1737	-2637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACACTTGCGCTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	102317942	102338477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102318155_102334065_102334232_102338391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009677	chr15	+	1709	2	ISM	ENSMUSG00000001280.14	ENST00000426431.2	7375	6	25911	677	25911	-677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATATCTTGCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102342116	102344146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102342421_102342741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009678	chr15	+	366	1	ISM	ENSMUSG00000001280.14	ENST00000327443.9	7497	7	29723	0	28252	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTCTGGTGTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	102344457	102344823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102344500_102344800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009679	chr15	+	1058	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	1	-4	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGCCATTACCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102367637	102371221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009680	chr15	+	477	3	ISM	ENSMUSG00000023048.14	ENSMUST00000171245.8	1353	4	229	2098	229	-2090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTCGCACAAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	102367895	102369121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102368017_102368542_102368582_102368804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009681	chr15	+	1007	3	NNC	ENSMUSG00000023048.14	novel	1055	4	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCACCTGTGCCATTACC	NA	NA	NA	NA	NA	NA	NA	NA	102368540	102371217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_102368582_102368804_102369159_102370605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009682	chr15	+	396	1	Genic_Genomic	ENSMUSG00000023048.14	novel	NA	NA	NA	NA	2329	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTAGTTTTGTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	102370846	102371242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_102370800_102371200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009683	chr15	+	283	3	ISM	ENSMUSG00000056851.15	ENSMUST00000230114.2	1086	14	912	19778	912	3983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGTTTATTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	102382680	102387182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102382715_102383009_102383127_102387050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009684	chr15	+	357	3	ISM	ENSMUSG00000056851.15	ENSMUST00000230114.2	1086	14	1239	15260	1239	8501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGCGTGGTCATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	102383007	102391700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102383127_102387050_102387183_102391594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009685	chr15	+	268	2	NNC	ENSMUSG00000056851.15	novel	2547	12	NA	NA	5277	8524	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCTCAGGCTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	102387045	102391723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_+_102387187_102391596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009686	chr15	+	313	3	ISM	ENSMUSG00000056851.15	ENSMUST00000230114.2	1086	14	5303	14287	5303	9474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAGAAAATCCTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	102387071	102392673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102387183_102391594_102391724_102392600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009687	chr15	+	1723	4	ISM	ENSMUSG00000056851.15	ENST00000455667.7	2547	12	14925	149	14871	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACAGCTGCCAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	102396639	102408347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102396713_102398186_102398243_102399068_102399239_102406923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009688	chr15	+	1468	1	Genic_Genomic	ENSMUSG00000056851.15	novel	NA	NA	NA	NA	25267	7	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTGTCTTTCATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	102407035	102408503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_102407000_102408500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009689	chr15	+	562	3	ISM	ENSMUSG00000023051.12	ENST00000552857.5	912	6	3564	-2	3520	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCAGAGGTGCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	102430413	102431859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102430534_102431283_102431486_102431619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009690	chr15	+	937	4	ISM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	3525	0	3525	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	102430418	102432111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102430534_102430858_102430987_102431283_102431486_102431619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009691	chr15	-	454	3	ISM	ENSMUSG00000052414.10	ENST00000591834.1	1430	12	84126	-1	84126	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCCAAAGGGAAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	102449376	102432563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102432707_102446617_102446727_102449174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009692	chr15	+	249	2	Antisense	novelGene_ENSMUSG00000099083.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGGGGGGAGAGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	102432564	102446726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr15_+_102432709_102446621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009693	chr15	-	145	1	NIC	ENSMUSG00000023052.9	novel	446	3	NA	NA	347	-291	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCCAAAGGGAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	102432709	102432564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_102432600_102432700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009694	chr15	-	309	2	NNC	ENSMUSG00000099083.8	novel	1457	12	NA	NA	-11916	-860	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGATTTGTAACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	102449376	102446617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr15_-_102446727_102449176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009695	chr15	-	427	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	78530	894	-17533	-894	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGCACTACAGAAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	102454993	102446651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102446727_102449174_102449373_102454839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009696	chr15	-	361	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	77805	3537	-18258	-3537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGGTTTTTAGAGCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	102455718	102449294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102449373_102454839_102454993_102455588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009697	chr15	-	343	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	77215	9107	-18848	-9107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCATCCCCTGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102456308	102454864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102454993_102455588_102455703_102456207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009698	chr15	-	374	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	73525	9831	-22538	-9831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATACCCTAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	102459998	102455588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102455703_102456207_102456308_102459838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009699	chr15	-	396	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	71162	10455	-24901	-10455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGGTGAGCTTTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	102462361	102456212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102456308_102459838_102459997_102462218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009700	chr15	-	350	3	ISM	ENSMUSG00000052414.10	ENST00000591834.1	1430	12	67485	27347	67485	-27347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTTCATCCAACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102466017	102459911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102459997_102462218_102462357_102465890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009701	chr15	-	371	3	ISM	ENSMUSG00000052414.10	ENST00000591834.1	1430	12	61653	29645	61653	-29645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCCAAGAGTCACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	102471849	102462209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102462357_102465890_102466014_102471748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009702	chr15	-	276	3	ISM	ENSMUSG00000099083.8	ENSMUST00000169033.8	2165	11	31347	20147	31332	-20147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAAAGGCAAGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	102502176	102465904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_102466014_102471748_102471846_102502106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009703	chr15	-	609	4	FSM	ENSMUSG00000062683.12	ENST00000429083.1	425	4	-33	-151	-33	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGAGTCTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	102576217	102571297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_102571564_102573488_102573683_102574197_102574271_102576141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009704	chr15	-	731	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102579562	102571298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009705	chr15	-	595	4	NIC	ENSMUSG00000062683.12	novel	636	5	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102576208	102571298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_-_102571564_102573488_102573683_102574197_102574271_102576145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009706	chr15	+	2141	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	139	181	139	-181	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACAAAACAGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102829676	102837068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102830353_102835603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009707	chr15	+	1505	1	ISM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	6207	0	6207	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGCTTGGGATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	102835744	102837249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102835700_102837200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009708	chr15	+	142	1	FSM	ENSMUSG00002076870.1	ENSMUST00020183146.1	157	1	16	-1	16	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAACCACGGAGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	102858226	102858368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102858200_102858400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009709	chr15	+	2033	2	FSM	ENSMUSG00000001656.4	ENST00000243082.4	2031	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATTTTATTTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	102862855	102866145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102863647_102864903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009710	chr15	+	2018	2	FSM	ENSMUSG00000001656.4	ENSMUST00000001701.4	2021	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGATTTTATTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	102862864	102866143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102863643_102864903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009711	chr15	+	1903	2	FSM	ENSMUSG00000022484.8	ENSMUST00000001699.8	1909	2	11	-5	11	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGGGTTTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	102875241	102880333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102876044_102879232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009712	chr15	+	2369	3	FSM	ENSMUSG00000036139.7	ENSMUST00000001706.7	2374	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCCGGCTGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	102885471	102893531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102885537_102889523_102890623_102892326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009713	chr15	+	412	2	ISM	ENSMUSG00000036139.7	ENST00000508190.1	1224	3	0	2516	0	-2516	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCAGCTTCCCGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	102885495	102890398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102885537_102890027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009714	chr15	+	406	1	ISM	ENSMUSG00000036139.7	ENSMUST00000001706.7	2374	3	7046	613	7017	4	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	102892512	102892918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102892500_102892900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009715	chr15	+	610	2	FSM	ENSMUSG00000022485.4	ENST00000512206.1	1388	2	4	774	4	-774	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGGCGGAGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	102906886	102923952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102907204_102923659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009716	chr15	+	344	1	ISM	ENSMUSG00000022485.4	ENSMUST00000001709.3	2923	2	2140	1131	2140	4	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTACTTCTGTCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	102924386	102924730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_102924400_102924700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009717	chr15	+	1944	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	39	0	39	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAATGTCTGATGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	102942859	102945278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_+_102943588_102944062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009718	chr15	-	2168	1	ISM	ENSMUSG00000036061.11	ENSMUST00000229377.2	3601	5	6520	0	2545	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTTTGCAAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	103063884	103061716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103061700_103063900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009719	chr15	-	2349	2	FSM	ENSMUSG00000036061.11	ENSMUST00000064067.9	3281	2	195	737	195	-737	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCATCAGGTACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	103066234	103062470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr15_-_103064629_103066043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009720	chr15	-	2429	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	45844	0	21333	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGGTAGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	103102399	103099970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103100000_103102400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009721	chr15	-	443	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	42689	5141	18178	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGGCATTGAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	103105554	103105111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103105100_103105600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009722	chr15	-	2494	3	ISM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	9725	848	9678	-848	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATTGCAGTGACCATA	NA	NA	NA	NA	NA	NA	NA	NA	103114054	103105961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103108219_103109227_103109329_103113918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009723	chr15	-	317	1	ISM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	40246	7710	15735	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGGCCTTTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	103107997	103107680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103107700_103108000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009724	chr15	+	451	3	ISM	ENSMUSG00000046434.17	ENSMUST00000231141.2	1541	9	594	2858	594	-2858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGATAAGATTGTTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	103149514	103150524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103149624_103149872_103150020_103150329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009725	chr15	+	283	3	ISM	ENSMUSG00000046434.17	ENSMUST00000231141.2	1541	9	1492	2514	1492	-2514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCGAGGAGGGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	103150412	103150868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103150541_103150632_103150726_103150806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009726	chr15	+	333	3	ISM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	1950	1867	1888	-1867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGATGCAGGTACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	103150808	103151515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103150900_103151070_103151146_103151348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009727	chr15	+	359	3	ISM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	2245	1173	2183	-1173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGTATCTATGACAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	103151103	103152209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103151146_103151348_103151508_103152051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009728	chr15	+	301	2	ISM	ENSMUSG00000046434.17	ENSMUST00000231141.2	1541	9	3470	464	3470	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTACTGTAGACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103152390	103152918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103152456_103152682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009729	chr15	+	240	4	ISM	ENSMUSG00000060992.10	ENST00000549116.5	380	7	11	2120	4	-2120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCCCGTATTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	103181342	103205048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103181369_103197527_103197597_103203148_103203205_103204959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009730	chr15	+	257	4	ISM	ENSMUSG00000060992.10	ENST00000549116.5	380	7	16195	1955	16188	-1955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAGGGATGTGTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	103197526	103205213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103197597_103203148_103203205_103204959_103205038_103205160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009731	chr15	+	316	5	ISM	ENSMUSG00000060992.10	ENST00000552362.5	508	8	18429	-1	18417	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGAGCCCAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103199755	103207169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103199848_103203148_103203205_103204959_103205038_103205160_103205201_103207119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009732	chr15	+	237	4	ISM	ENSMUSG00000060992.10	ENST00000549116.5	380	7	21807	814	21800	-814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTCCTTCTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103203138	103206354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103203205_103204959_103205038_103205160_103205213_103206313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009733	chr15	+	728	4	ISM	ENSMUSG00000060992.10	ENST00000455864.6	817	8	23630	-180	23618	180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACAGTGATTTAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	103204956	103207675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_+_103205038_103205160_103205213_103206313_103206353_103207119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009734	chr15	+	410	1	NIC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	25750	3	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCTCATCCCAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	103207088	103207498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr15_+_103207100_103207500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009735	chr15	+	766	1	Genic_Genomic	ENSMUSG00000060992.10	novel	NA	NA	NA	NA	26192	1	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGATGGCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	103207530	103208296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr15_+_103207500_103208300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009736	chr15	-	192	1	ISM	ENSMUSG00000000552.11	ENSMUST00000229373.2	2348	8	20223	18	9406	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTTCTGCCCTCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	103222531	103222339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103222300_103222500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009737	chr15	-	864	5	ISM	ENSMUSG00000000552.11	ENST00000551771.5	1107	6	12907	0	3110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTCTCTCCTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	103228827	103223328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103223653_103223787_103223884_103224053_103224224_103226375_103226539_103228716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009738	chr15	-	312	2	ISM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	7455	1751	7455	-757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGTCAATTCGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	103224482	103224085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103224224_103224308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009739	chr15	-	315	2	ISM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	5400	2064	5400	-1070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAGGAGAAGGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	103226537	103224398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103224552_103226375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009740	chr15	-	249	2	ISM	ENSMUSG00000000552.11	ENST00000551771.5	1107	6	105	5388	105	-5388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAGCCCAGCCGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	103241629	103228716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103228828_103241491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009741	chr15	-	319	2	ISM	ENSMUSG00000000552.11	ENST00000546970.5	2470	8	55	19152	55	-18163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATTGTCTGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	103242698	103241491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103241629_103242516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009742	chr15	-	469	2	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	20780	630	20780	-630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCATCTGACTCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	103254410	103253342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103253780_103254378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009743	chr15	-	424	4	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	14206	7254	14206	-7254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAAAGAACTTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	103260984	103259966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103260106_103260441_103260597_103260684_103260741_103260910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009744	chr15	-	458	5	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	13433	7818	13433	-7818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCCAAGCAGGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	103261757	103260530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009745	chr15	-	402	2	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	12980	8857	12980	-8857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGTGGCCACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	103262210	103261569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103261762_103262000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009746	chr15	-	443	2	ISM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	64	14852	64	-14852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGTACTGCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	103275126	103267564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr15_-_103267608_103274726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009747	chr16	+	863	5	FSM	ENSMUSG00000005982.15	ENST00000421765.7	866	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTGGTCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3702480	3719969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3719639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009748	chr16	+	517	4	ISM	ENSMUSG00000005982.15	ENST00000572942.5	690	5	9735	0	80	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTGGTCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3712318	3719969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_3712349_3715114_3715245_3717735_3717833_3719709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009749	chr16	+	460	2	ISM	ENSMUSG00000005982.15	ENSMUST00000175809.8	279	3	2876	-291	2876	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTGGTCATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3715114	3719969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_3715245_3719639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009750	chr16	+	979	2	ISM	ENSMUSG00000005982.15	ENSMUST00000115860.8	2303	7	17024	658	7418	-658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTCCTTCAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3719656	3721975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_3719990_3721329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009751	chr16	+	660	1	ISM	ENSMUSG00000005982.15	ENSMUST00000186375.8	2350	7	19428	0	9736	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	3721974	3722634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_3722000_3722600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009752	chr16	-	736	1	ISM	ENSMUSG00000005983.16	ENSMUST00000115859.8	2592	3	3651	0	2664	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGGCACAGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	3722902	3722166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_3722200_3722900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009753	chr16	-	959	3	NNC	ENSMUSG00000005983.16	novel	968	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTTTGTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3725586	3723661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_3724165_3724704_3725053_3725478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009754	chr16	-	969	3	FSM	ENSMUSG00000005983.16	ENST00000437192.8	968	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTTGTTTGTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3725590	3723661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_3724165_3724704_3725059_3725478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009755	chr16	-	940	3	NNC	ENSMUSG00000005983.16	novel	968	3	NA	NA	11	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCTGCACCTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	3725578	3723671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_3724158_3724704_3725059_3725478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009756	chr16	+	558	5	ISM	ENSMUSG00000093575.2	ENSMUST00000176233.2	1012	9	26803	-48	26803	48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTATTGCTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	3729314	3737429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009757	chr16	+	573	5	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	6379	12379	6379	-12379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCCTTGGCCTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	3733350	3746496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009758	chr16	+	613	6	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	8740	7199	8740	-7199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAATGTAACTCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3735711	3751676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009759	chr16	+	538	5	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	20732	0	20732	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTGGGCTTAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	3747703	3758875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_3747777_3751570_3751679_3755422_3755479_3755717_3755775_3758631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009760	chr16	-	1214	3	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	1815	11969	1815	-11969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGTTAACAGAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3782490	3777285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_3777339_3780317_3780405_3781416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009761	chr16	-	1270	2	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	802	16820	802	-16820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTCCATGGGCTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	3783503	3782136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_3783167_3783263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009762	chr16	-	323	1	FSM	ENSMUSG00000084304.2	ENSMUST00000120290.2	325	1	160	-158	160	158	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTTCATCTAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4138384	4138061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_4138100_4138400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009763	chr16	-	512	1	ISM	ENSMUSG00000022519.15	ENSMUST00000090500.10	3698	6	42348	0	42348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGCCTTGGCCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4298591	4298079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4298100_4298600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009764	chr16	-	528	2	ISM	ENSMUSG00000022519.15	ENSMUST00000023161.8	5000	7	36562	2766	36562	-2766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCACCGGGAACTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	4304377	4300857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4301149_4304140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009765	chr16	+	517	1	ISM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	20728	0	20728	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTGGGACACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4433304	4433821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4433300_4433800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009766	chr16	-	579	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	18	-1	18	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTGTTTGAGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4442834	4434326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009767	chr16	+	1240	2	FSM	ENSMUSG00000039646.6	ENSMUST00000038770.4	2829	2	89	1500	89	-1500	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACTTCTAGCCAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	4457893	4467166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_4458013_4466045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009768	chr16	+	1208	1	ISM	ENSMUSG00000039646.6	ENSMUST00000038770.4	2829	2	9654	0	9654	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGCTTGAGATTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	4467458	4468666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4467500_4468700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009769	chr16	+	1685	6	ISM	ENSMUSG00000004069.18	ENST00000431375.6	2139	9	12281	-6	12273	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4514251	4525559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009770	chr16	+	1130	1	NIC	ENSMUSG00000004069.18	novel	2648	12	NA	NA	22451	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4524429	4525559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_4524400_4525600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009771	chr16	-	2437	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAAACTTTTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4536970	4527922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009772	chr16	+	332	3	ISM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	14	2896	14	-2399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTCCCTCAGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	4544240	4581710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4544336_4580422_4580542_4581592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009773	chr16	+	559	3	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	5655	1319	5655	-1319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCCCAGCACTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	4580421	4582790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4580542_4581592_4581711_4582469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009774	chr16	+	346	2	NNC	ENSMUSG00000004070.16	novel	1730	6	NA	NA	6918	-1324	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAAACTTCCCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	4581684	4582785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_4581715_4582469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009775	chr16	+	814	3	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	7820	-44	7820	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGATAAAGGCTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	4582586	4584153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4582962_4583626_4583754_4583841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009776	chr16	-	3195	1	Genic_Genomic	ENSMUSG00000004071.14	novel	NA	NA	NA	NA	1144	2	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTGGCTCTATACTAA	NA	NA	NA	NA	NA	NA	NA	NA	4586517	4583322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_4583300_4586500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009777	chr16	+	274	1	NIC	ENSMUSG00000004070.16	novel	1730	6	NA	NA	9073	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	4583839	4584113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_4583800_4584100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009778	chr16	+	358	1	ISM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	40022	0	9482	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACCTGTGATTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4584248	4584606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4584200_4584600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009779	chr16	-	2438	3	ISM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	20493	-195	-2	195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTGTTTCTGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	4587663	4584509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4586514_4586608_4586883_4587503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009780	chr16	-	521	2	FSM	ENSMUSG00000004071.14	ENST00000564828.5	515	2	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAATTCAGAAGATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	4587663	4586152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_4586514_4587503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009781	chr16	-	1606	3	NNC	ENSMUSG00000039568.7	novel	1851	3	NA	NA	241	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTAGTCTTGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4697938	4692641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_4693734_4694225_4694282_4697480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009782	chr16	-	1852	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTAGTCTTGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4698180	4692641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_4693734_4694225_4694286_4697480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009783	chr16	-	1407	3	FSM	ENSMUSG00000039568.7	ENST00000590965.1	1403	3	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCTGTAGTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	4697670	4692645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_4693734_4694225_4694321_4697446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009784	chr16	-	1398	3	NNC	ENSMUSG00000039568.7	novel	1403	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCAGGCTCTGTAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4697665	4692647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_4693734_4694225_4694321_4697448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009785	chr16	-	454	1	ISM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	4519	565	4006	1	mono-exon	FALSE	NA	NA	NA	NA	NA	599	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTCACAGCGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	4693660	4693206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4693200_4693700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009786	chr16	-	700	3	FSM	ENSMUSG00000039568.7	ENST00000587615.1	697	3	-3	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGTTCACAGCGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	4697669	4693207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_4693659_4694225_4694286_4697480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009787	chr16	-	450	3	NNC	ENSMUSG00000039568.7	novel	697	3	NA	NA	88	108	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGGCCAGAACCCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4697578	4693362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_4693659_4694225_4694282_4697480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009788	chr16	-	659	3	FSM	ENSMUSG00000039568.7	ENST00000587649.1	660	3	1	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCGACTTCAGACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4697666	4693470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_4693734_4694225_4694286_4697330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009789	chr16	+	529	4	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	-105	23640	0	-23640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAATGGCGTGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	4704144	4729313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009790	chr16	+	479	4	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	20976	21282	20976	-21282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCCTGGGGAACTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	4725225	4731671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4725351_4728583_4728673_4729185_4729333_4731553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009791	chr16	+	504	6	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	29718	8715	29718	-8715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTGTTCGGTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	4733967	4744238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009792	chr16	+	628	5	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	33931	7188	33931	-7188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCCAATGTCCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	4738180	4745765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009793	chr16	+	526	4	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	38038	4275	38038	-4275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCCTGGCCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	4742287	4748678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4742397_4744172_4744239_4745538_4745766_4748554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009794	chr16	+	528	5	ISM	ENSMUSG00000022517.18	ENSMUST00000230990.2	2519	17	39934	2811	39934	-2811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGACATCTACCTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	4744183	4750142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009795	chr16	+	1362	4	ISM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	44459	287	44322	-287	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAACCCTGCTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	4748571	4755872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4748679_4748976_4749020_4750063_4750163_4754759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009796	chr16	-	1122	1	ISM	ENSMUSG00000097397.3	ENSMUST00000181498.3	1694	3	3463	0	3463	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTGCCTGCATGTATC	NA	NA	NA	NA	NA	NA	NA	NA	4754034	4752912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4752900_4754000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009797	chr16	+	1409	1	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	50502	0	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	4754751	4756160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_4754800_4756200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009798	chr16	+	1210	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	27	381	27	-378	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATGCTCTCACCCATC	NA	NA	NA	NA	NA	NA	NA	NA	4756651	4758502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_4757158_4757241_4757503_4758059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009799	chr16	+	479	1	ISM	ENSMUSG00000022516.11	ENSMUST00000229961.2	1162	4	1430	12	1420	1	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTTCTGAGTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	4758405	4758884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4758400_4758900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009800	chr16	-	339	1	ISM	ENSMUSG00000022542.8	ENSMUST00000170323.3	2576	8	10185	471	8948	3	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAACGAGTCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	4805531	4805192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4805200_4805500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009801	chr16	-	691	5	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	4586	0	4586	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTGTAAACGAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4809893	4805195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4805523_4805610_4805663_4806342_4806440_4809590_4809687_4809774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009802	chr16	-	384	4	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	2808	1147	2808	-1147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTGGGAACATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	4811671	4806342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4806440_4809590_4809687_4809774_4809893_4811598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009803	chr16	-	426	4	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	2593	4394	2593	-4394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGCTGTAGACAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	4811886	4809589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4809687_4809774_4809893_4811598_4811681_4811757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009804	chr16	-	485	4	ISM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	3	4589	3	-4589	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGCAGGGTGATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	4814476	4809784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4809893_4811598_4811681_4811757_4811884_4814307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009805	chr16	-	444	1	Genic_Genomic	ENSMUSG00000022540.17	novel	NA	NA	NA	NA	4345	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTGTCTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	4827036	4826592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_4826600_4827000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009806	chr16	-	514	2	ISM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	3912	137	3912	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCACCTCTGAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	4827469	4826730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4827117_4827341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009807	chr16	-	1587	1	Genic_Genomic	ENSMUSG00000022536.15	novel	NA	NA	NA	NA	34363	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACTGTATCATTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	4833358	4831771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_4831800_4833400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009808	chr16	-	1774	3	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	30878	185	30878	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCCTTGAAATGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	4836843	4831957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_4833467_4836263_4836389_4836703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009809	chr16	+	1664	1	ISM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	34567	2	33890	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4902487	4904151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_4902500_4904200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009810	chr16	-	546	1	Genic_Genomic	ENSMUSG00000023143.11	novel	NA	NA	NA	NA	8172	4	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGGGGGCGTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	5013694	5013148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_5013100_5013700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009811	chr16	-	482	4	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	3962	3286	3962	-3286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCTGCCTGCAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	5017904	5016438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_5016488_5016594_5016801_5017479_5017609_5017806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009812	chr16	-	602	2	ISM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	202	6083	202	-6083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGCACAGGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5021664	5019235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_5019378_5021204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009813	chr16	+	311	4	ISM	ENSMUSG00000039427.15	ENST00000515248.1	499	6	1	2366	1	-1206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGGGCGGGCTGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	5057791	5059261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_5057892_5058007_5058047_5058322_5058383_5059149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009814	chr16	+	326	4	ISM	ENSMUSG00000039427.15	ENST00000515248.1	499	6	215	1161	215	-1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGGTGCAGATACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	5058005	5060466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_5058047_5058322_5058383_5059149_5059261_5060352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009815	chr16	+	157	2	FSM	ENSMUSG00000039427.15	ENST00000611639.2	153	2	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGCAGATACCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	5058340	5060467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_5058383_5060352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009816	chr16	+	325	4	FSM	ENSMUSG00000039427.15	ENST00000533887.1	337	4	13	-1	13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGTCTACTCCGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	5058357	5061628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_5058383_5059149_5059261_5060352_5060465_5061551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009817	chr16	+	279	3	ISM	ENSMUSG00000039427.15	ENST00000533887.1	337	4	792	33	792	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATGCTGAGGAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	5059136	5061594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_5059261_5060352_5060465_5061551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009818	chr16	+	119	1	NIC	ENSMUSG00000039427.15	novel	1368	12	NA	NA	2005	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGCAGATACCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5060349	5060468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_5060300_5060500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009819	chr16	+	591	3	ISM	ENSMUSG00000039427.15	ENSMUST00000049207.9	1669	12	8915	8	2072	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAAGTGTTTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5060416	5062768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_5060468_5061551_5061628_5062304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009820	chr16	-	748	1	ISM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	11084	0	11037	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCGCATGTGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	5062763	5062015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_5062000_5062800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009821	chr16	+	469	1	NIC	ENSMUSG00000039427.15	novel	1669	12	NA	NA	3958	4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTTGCTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	5062302	5062771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_5062300_5062800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009822	chr16	-	1087	3	ISM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	7173	540	7126	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGTAGCCAGATCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	5066674	5062555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_5063250_5065316_5065464_5066428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009823	chr16	-	562	4	FSM	ENSMUSG00000022544.15	ENST00000587133.1	559	4	1	-4	1	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCAGCAGCAACCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	5073799	5066424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_5066695_5066775_5066910_5070888_5070952_5073704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009824	chr16	-	614	5	ISM	ENSMUSG00000022544.15	ENST00000513466.5	708	6	2849	0	2849	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCCCCAGCAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	5070951	5066428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_5066695_5066775_5066878_5067210_5067313_5068338_5068420_5070888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009825	chr16	+	404	2	Antisense	novelGene_ENSMUSG00000022544.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAAGGAGAATGAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	5066428	5066916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr16_+_5066699_5066782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009826	chr16	-	281	1	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	7091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCCCCAGCAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	5066709	5066428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_5066400_5066700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009827	chr16	+	355	2	ISM	ENSMUSG00000008658.17	ENST00000682918.1	3918	13	62	187868	62	-184096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACCGCCACAGTAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	7035566	7042402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_7035694_7042174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009828	chr16	+	912	3	ISM	ENSMUSG00000008658.17	ENST00000676218.1	3704	12	151588	1898	151587	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCACCTGCAGTACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	7193760	7228395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_7193834_7225827_7225904_7227632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009829	chr16	+	1242	4	ISM	ENSMUSG00000008658.17	ENST00000547372.5	3168	14	167675	963	167675	-218	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTATTTTTTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	7209848	7227459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_7209905_7225827_7225904_7226283_7226517_7226582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009830	chr16	+	1837	2	ISM	ENSMUSG00000008658.17	ENST00000675459.1	3870	13	183645	1023	183645	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACGCTGTGAACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	7225818	7229306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_7225904_7227554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009831	chr16	+	924	1	NIC	ENSMUSG00000008658.17	novel	3061	15	NA	NA	185326	1	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCCACTAGTTATTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	7227499	7228423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_7227500_7228400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009832	chr16	+	1794	1	ISM	ENSMUSG00000008658.17	ENST00000674792.1	3871	13	186363	0	186362	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGAAAAGGTACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	7228535	7230329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_7228500_7230300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009833	chr16	+	205	2	ISM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	3057	12635	3057	-12635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACAGAGGAGATGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	8291708	8295913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_8291831_8295830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009834	chr16	+	203	2	ISM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	7375	8522	7375	-8522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTGGGTAGGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	8296026	8300026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_8296194_8299990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009835	chr16	+	209	1	Genic_Genomic	ENSMUSG00000039345.17	novel	NA	NA	NA	NA	19689	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAAGTCGTCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	8308340	8308549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_8308300_8308500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009836	chr16	+	1023	6	ISM	ENSMUSG00000057880.13	ENST00000396600.6	1667	13	27326	-1	27326	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTGTAAGCATTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	8423419	8436721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009837	chr16	-	3392	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGGTTTTTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8455577	8451092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_8454257_8455349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009838	chr16	+	378	4	FSM	ENSMUSG00000022711.17	ENST00000569958.5	388	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTCTTCCCTTGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	8460609	8473500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_8460714_8466749_8466822_8469273_8469390_8473414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009839	chr16	+	1234	3	ISM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	13734	-2	8672	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTGGCCGAATCATAC	NA	NA	NA	NA	NA	NA	NA	NA	8469271	8475397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_8469390_8473414_8473553_8474419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009840	chr16	-	1090	2	Antisense	novelGene_ENSMUSG00000022711.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCTCATGGTCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	8475395	8473438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr16_-_8473546_8474412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009841	chr16	-	699	1	ISM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	12877	0	7277	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACTGTAAAAGGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8477142	8476443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_8476400_8477100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009842	chr16	-	945	3	ISM	ENSMUSG00000008393.10	ENST00000610831.4	874	4	2131	-220	2131	220	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCACCTTCTGGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	8482288	8478315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_8478968_8481450_8481574_8482118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009843	chr16	-	400	1	ISM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	11087	2089	5487	3	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCAGTCCCAGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	8478932	8478532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_8478500_8478900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009844	chr16	-	407	3	ISM	ENSMUSG00000008393.10	ENST00000610831.4	874	4	14	2936	14	-2936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTCCTGCACATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	8484405	8481471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_8481574_8482118_8482287_8484268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009845	chr16	-	824	1	ISM	ENSMUSG00000059003.13	ENSMUST00000199708.5	14634	14	417046	9156	184108	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATGTCTTCGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	9395741	9394917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_9394900_9395700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009846	chr16	-	821	2	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	149227	1940	149227	-1168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAGAACCACAAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	9430622	9396858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_9397491_9430433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009847	chr16	-	821	3	ISM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	95	92650	95	-91878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTCAGGGATGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	9579754	9487568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_9487775_9525467_9525583_9579254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009848	chr16	-	150	1	ISM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	32070	0	32070	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTGTATGGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	10099762	10099612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_10099600_10099800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009849	chr16	-	251	2	ISM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	28390	2740	28390	-2740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGCCTTCACTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	10103442	10102352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_10102480_10103318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009850	chr16	-	203	2	ISM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	25808	3756	25808	-3756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAGGGAGAGAGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	10106024	10103368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_10103466_10105918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009851	chr16	-	260	2	ISM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	21555	6304	21555	-6304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGGTGGCTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	10110277	10105916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_10106025_10110125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009852	chr16	-	153	2	ISM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	40	10640	40	-10640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTTGGACTTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	10131792	10110252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_10110289_10131675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009853	chr16	-	365	1	ISM	ENSMUSG00000050908.13	ENSMUST00000051118.7	3315	7	26441	0	26441	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTCTCATAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	10238785	10238420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_10238400_10238800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009854	chr16	+	864	3	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	9627	513	9627	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTGTACTGTGGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	10239438	10241779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_10239544_10240685_10240770_10241104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009855	chr16	+	714	1	Genic_Genomic	ENSMUSG00000022503.11	novel	NA	NA	NA	NA	11771	4	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTCATTCTTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	10241582	10242296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_10241600_10242300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009856	chr16	+	231	1	FSM	ENSMUSG00000071671.6	ENSMUST00000096279.6	333	1	189	-87	189	87	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTCCAGAGATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	10619433	10619664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_10619400_10619700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009857	chr16	-	978	1	Genic_Genomic	ENSMUSG00000022500.16	novel	NA	NA	NA	NA	15330	3	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	10778113	10777135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_10777100_10778100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009858	chr16	-	1388	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	16	831	16	718	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCTACACCCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	10810969	10777969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009859	chr16	+	2424	2	FSM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	12	436	12	-436	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAGAACTGTTGAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	10884205	10892413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_10884312_10890095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009860	chr16	+	2225	1	ISM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	6431	0	6431	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGTCTTCACCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	10890624	10892849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_10890600_10892800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009861	chr16	-	896	1	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	38906	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	10955351	10954455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_10954500_10955400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009862	chr16	-	1083	3	ISM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	35647	5	35647	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATAGTTTTGGTGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	10958610	10954460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_10955350_10956884_10957049_10958580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009863	chr16	-	1768	8	ISM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	870	0	870	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	11020325	11010833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009864	chr16	-	399	1	Genic_Genomic	ENSMUSG00000062203.16	novel	NA	NA	NA	NA	34520	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCTGCAAATATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	11037553	11037154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_11037200_11037600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009865	chr16	-	157	1	ISM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	34063	759	34002	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTGTAAGTAAAGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	11038071	11037914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_11037900_11038100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009866	chr16	-	541	2	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	31456	456	31456	-456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGCATAGTTAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	11040617	11038371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_11038744_11040448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009867	chr16	-	184	2	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	23276	10512	23276	-10512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGACAGGAGCGAATC	NA	NA	NA	NA	NA	NA	NA	NA	11048797	11048427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_11048515_11048700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009868	chr16	-	177	2	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	21559	10882	21559	-10882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACATGCAATGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	11050514	11048797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_11048856_11050395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009869	chr16	-	180	2	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	18766	12559	18766	-12559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGATGCTCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	11053307	11050474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_11050577_11053229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009870	chr16	-	390	3	ISM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	255	20614	255	-20614	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAATTTCTGACCATAT	NA	NA	NA	NA	NA	NA	NA	NA	11071818	11058529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_11058572_11058668_11058705_11071506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009871	chr16	-	1109	2	ISM	ENSMUSG00000065979.13	ENSMUST00000121750.2	2614	4	80823	1173	80823	-1173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTGCTGATGCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	11646463	11622763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_11623448_11646038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009872	chr16	-	1918	3	FSM	ENSMUSG00000065979.13	ENSMUST00000073371.7	1922	3	6	-2	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGCTTCTTAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	11727303	11702084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_11703610_11705441_11705661_11727129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009873	chr16	+	488	2	ISM	ENSMUSG00000022545.14	ENST00000682617.1	2889	12	34535	319	34535	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTGAGGAGCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	12962304	12965804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_12962378_12965389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009874	chr16	+	418	1	ISM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	38633	0	38411	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	12966180	12966598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_12966200_12966600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009875	chr16	+	411	1	ISM	ENSMUSG00000109857.2	ENSMUST00000210738.2	527	3	4281	0	2643	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTAATTCCCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	13284690	13285101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_13284700_13285100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009876	chr16	-	1277	3	ISM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	101461	0	101356	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	13384573	13355823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_13356767_13358918_13359113_13384433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009877	chr16	+	1616	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTACTTTGGTATCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	13489882	13496253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_13489943_13494697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009878	chr16	+	1557	1	Genic_Genomic	ENSMUSG00000079737.5	novel	NA	NA	NA	NA	4812	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTACTTTGGTATCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	13494695	13496252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_13494700_13496300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009879	chr16	+	1558	3	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	29863	361	28575	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCCCTGGCTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	13628439	13632342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_13628521_13629385_13629474_13630953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009880	chr16	+	1478	1	ISM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	32649	0	31361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	13631225	13632703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_13631200_13632700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009881	chr16	+	636	5	ISM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	11869	-1	11795	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAGATGACTTTTTACG	NA	NA	NA	NA	NA	NA	NA	NA	13648983	13653316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009882	chr16	-	1080	1	Genic_Genomic	ENSMUSG00000022680.15	novel	NA	NA	NA	NA	68798	4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTAGCTTCTACCAATT	NA	NA	NA	NA	NA	NA	NA	NA	13652087	13651007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_13651000_13652100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009883	chr16	-	1209	2	ISM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	66522	710	66416	302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGGCTGGTCTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	13654469	13651721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_13652711_13654249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009884	chr16	+	272	1	ISM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	15928	1	15854	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAGATGACTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	13653042	13653314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_13653000_13653300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009885	chr16	+	1766	5	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	20130	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	14001338	14010792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_14001477_14003557_14003738_14006176_14006269_14007950_14008101_14009586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009886	chr16	-	1384	4	ISM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	3361	0	3318	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	14131878	14117107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009887	chr16	-	164	3	FSM	ENSMUSG00000022677.16	ENST00000575744.5	163	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCAGATGGAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	14135197	14122412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_14122452_14128910_14128996_14135157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009888	chr16	+	2020	3	FSM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTACTCATATACTATT	NA	NA	NA	NA	NA	NA	NA	NA	14523716	14527249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_14523917_14524574_14525124_14525978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009889	chr16	+	1280	1	NIC	ENSMUSG00000022676.8	novel	2021	3	NA	NA	2254	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTACTCATATACTATT	NA	NA	NA	NA	NA	NA	NA	NA	14525969	14527249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_14526000_14527200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009890	chr16	+	688	5	FSM	ENSMUSG00000068617.6	ENST00000433756.1	659	5	-1	-28	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCATCTGTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	14724450	14742046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_14724677_14735506_14735612_14738158_14738311_14738644_14738750_14741946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009891	chr16	+	109	1	NIC	ENSMUSG00000068617.6	novel	2752	6	NA	NA	17320	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCATCTGTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	14741937	14742046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_14741900_14742000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009892	chr16	-	4209	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGCCTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	15412387	15370537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009893	chr16	-	4137	3	NNC	ENSMUSG00000022674.16	novel	4207	4	NA	NA	13263	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTGTGCCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	15399073	15370539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_15374408_15394886_15395005_15398922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009894	chr16	-	4201	4	NNC	ENSMUSG00000022674.16	novel	4207	4	NA	NA	-6	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTGTGCCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	15412377	15370539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_15374408_15394878_15395005_15398918_15399072_15412323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009895	chr16	-	684	1	ISM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	38336	2828	38284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGACTATCAAAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	15374052	15373368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15373400_15374100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009896	chr16	-	813	2	ISM	ENSMUSG00000022674.16	ENSMUST00000118236.8	893	4	13272	-8	13272	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTTGAATTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	15399064	15373736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15374408_15398922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009897	chr16	-	355	1	Genic_Genomic	ENSMUSG00000022673.6	novel	NA	NA	NA	NA	12936	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAGTAGGCATTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	15442114	15441759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_15441800_15442100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009898	chr16	-	732	3	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	11134	506	10920	274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTTGTGTTGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	15444130	15442266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15442634_15443425_15443560_15443899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009899	chr16	-	424	2	ISM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	9542	2154	9328	-1374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTACTACAGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	15445722	15443914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15444129_15445512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009900	chr16	-	454	2	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	7551	3924	7551	-3924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCAAGGTACTAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	15447499	15446464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15446585_15447165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009901	chr16	-	629	2	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	6664	4624	6664	-4624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTGATGTCCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	15448386	15447164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15447532_15448124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009902	chr16	-	562	3	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	4847	5626	4847	-5626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGCTCCCAGCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	15450203	15448166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15448385_15449562_15449684_15449980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009903	chr16	-	431	4	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	1094	9762	1094	-9762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATATATTTAGTAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	15453956	15452302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15452442_15452912_15453009_15453093_15453190_15453856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009904	chr16	-	566	3	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	-163	11508	51	-11508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTACAAAGCAGATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	15455213	15454048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15454214_15454484_15454647_15454974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009905	chr16	-	1036	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGAGTCCTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15681211	15666303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_15666594_15680261_15680408_15680611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009906	chr16	-	279	1	ISM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	14620	8	14583	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGTTCTATGTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	15666591	15666312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15666300_15666600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009907	chr16	-	315	1	ISM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	257313	0	257313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	15707402	15707087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15707100_15707400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009908	chr16	-	344	2	ISM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	179999	47377	179999	-47377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGCATGTCGGGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	15784716	15754464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15754558_15784465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009909	chr16	-	327	2	ISM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	178156	77470	178156	-77470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGCAGAGGGTGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	15786559	15784557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15784717_15786391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009910	chr16	-	324	2	ISM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	98745	148265	98745	-148265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGTAAAGAACTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	15865970	15855352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15855574_15865867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009911	chr16	-	336	2	ISM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	27864	225603	27864	-225603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAACAGATTGTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	15936851	15932690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_15932846_15936670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009912	chr16	+	1010	5	ISM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	12531	12342	12531	-12342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGATGGTCTCATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	16043712	16078234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009913	chr16	+	1261	4	ISM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	7	2257	7	-1559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTGTGATTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	16120848	16125247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009914	chr16	-	1672	1	Genic_Genomic	ENSMUSG00000022789.16	novel	NA	NA	NA	NA	44634	2	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGATGTGCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	16131763	16130091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_16130100_16131800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009915	chr16	-	677	3	ISM	ENSMUSG00000022789.16	ENSMUST00000230022.2	2635	18	42101	255	42089	213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCATGCACTATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	16134308	16131501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16131908_16132127_16132288_16134197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009916	chr16	-	434	4	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	40386	325	40054	-325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGAGGACATGGCCCAACG	NA	NA	NA	NA	NA	NA	NA	NA	16136343	16132175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16132288_16134197_16134308_16134465_16134643_16136308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009917	chr16	-	424	4	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	34770	7633	34438	-7633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGCCTGTGGGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	16141959	16139483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16139541_16141193_16141284_16141485_16141642_16141838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009918	chr16	-	427	3	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	28854	9694	28522	-9694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGTCCATGAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	16147875	16141544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16141642_16141838_16141960_16147666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009919	chr16	-	409	3	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	26731	10041	26399	-10041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGGTGGCCTTAACACT	NA	NA	NA	NA	NA	NA	NA	NA	16149998	16141891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16141960_16147666_16147874_16149864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009920	chr16	-	427	3	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	24915	15850	24583	6647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAACCGCAAAGTACATT	NA	NA	NA	NA	NA	NA	NA	NA	16151814	16147700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16147874_16149864_16149997_16151692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009921	chr16	-	417	3	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	21852	18011	21520	4486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTCACTTTTTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	16154877	16149861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16149997_16151692_16151814_16154716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009922	chr16	-	371	3	ISM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	20186	19842	19854	2655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGCAATTTAAATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	16156543	16151692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16151814_16154716_16154880_16156456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009923	chr16	-	348	1	ISM	ENSMUSG00000059305.13	ENSMUST00000075017.5	766	2	288	217	160	2	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTATACAGATTTGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	16686831	16686483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16686500_16686800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009924	chr16	-	369	2	FSM	ENSMUSG00000059305.13	ENST00000302273.2	405	2	-1	37	-1	-37	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAGAGGATGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	16686992	16686522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_16686829_16686929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009925	chr16	+	2823	1	ISM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	28073	0	28073	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGCCACTTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	16742405	16745228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_16742400_16745200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009926	chr16	+	1319	2	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	54929	2578	54684	126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGGAGTTGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	16856174	16862739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_16856304_16861549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009927	chr16	+	424	1	Genic_Genomic	ENSMUSG00000063358.18	novel	NA	NA	NA	NA	54998	8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTAAAAATAAAGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	16856488	16856912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_16856500_16856900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009928	chr16	+	1207	1	ISM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	62865	0	62620	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTCACTGTGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	16864110	16865317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_16864100_16865300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009929	chr16	-	350	2	ISM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	21987	1312	21958	-1312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCCTGGCATCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	16907119	16906491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16906731_16907008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009930	chr16	-	281	3	ISM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	16262	5369	16233	3076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGATGGCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	16912844	16910548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_16910656_16910874_16910951_16912746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009931	chr16	-	1104	3	NNC	ENSMUSG00000022769.10	novel	1108	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	16950247	16948001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_16948653_16949460_16949654_16949987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009932	chr16	-	1109	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	16950248	16948001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_16948653_16949460_16949658_16949987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009933	chr16	+	1399	2	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	264	0	264	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	16965106	16966710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_16965257_16965461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009934	chr16	+	792	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	365	226	365	-226	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAGTGAAAAGCCACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	16965207	16966484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_16965257_16965461_16965562_16965660_16965839_16966019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009935	chr16	+	599	1	Genic_Genomic	ENSMUSG00000041774.17	novel	NA	NA	NA	NA	1270	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTGGTTTATAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	16966112	16966711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_16966100_16966700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009936	chr16	-	1378	1	Genic_Genomic	ENSMUSG00000038965.18	novel	NA	NA	NA	NA	48081	1	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTATGGGTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	16971253	16969875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_16969900_16971300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009937	chr16	-	1804	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	-120	925	-120	916	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGAAGTGGGACGGACT	NA	NA	NA	NA	NA	NA	NA	NA	17019476	16970803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009938	chr16	+	603	2	ISM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	21063	2175	21063	-2175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTCTCACTCCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	17244912	17246516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_17245006_17246006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009939	chr16	+	398	2	ISM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	440	18506	-49	-15199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTACCTACAGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	17270290	17286792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_17270653_17286756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009940	chr16	+	330	1	ISM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	35118	0	34629	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTGTTTCAGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	17304968	17305298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_17305000_17305300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009941	chr16	-	341	1	ISM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	2814	0	2725	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAATCTCTGTTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17346186	17345845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17345800_17346200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009942	chr16	-	963	3	ISM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	659	0	659	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	17348252	17345941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17346605_17346798_17346940_17348093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009943	chr16	-	399	1	ISM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	3373	932	3307	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACACTGTGGTATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	17391212	17390813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17390800_17391200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009944	chr16	+	2177	1	ISM	ENSMUSG00000005899.15	ENSMUST00000006053.13	4623	20	23297	1	21164	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	17460514	17462691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_17460500_17462700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009945	chr16	-	864	1	ISM	ENSMUSG00000012114.18	ENSMUST00000232645.2	3105	17	70826	3	70752	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17469938	17469074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17469100_17469900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009946	chr16	-	899	3	ISM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	69618	332	69547	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTTTCTGGGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	17471143	17469416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17470128_17470572_17470672_17471054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009947	chr16	+	244	1	FSM	ENSMUSG00000116561.2	ENSMUST00000231388.2	665	1	20	401	20	-401	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACATTACCTTAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	17520810	17521054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_17520800_17521100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009948	chr16	+	1268	3	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	21528	0	21528	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	17602182	17611246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_17602260_17607000_17607235_17610289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009949	chr16	+	1615	2	ISM	ENSMUSG00000012017.5	ENSMUST00000012161.5	3308	11	9147	0	9114	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTGCTCTAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	17624292	17626157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_17624366_17624615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009950	chr16	+	1543	1	NIC	ENSMUSG00000012017.5	novel	3308	11	NA	NA	9436	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTGCTCTAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	17624614	17626157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_17624600_17626200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009951	chr16	-	2768	3	ISM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	46570	0	46503	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	17662954	17658218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17660642_17661835_17662073_17662846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009952	chr16	-	2428	1	NIC	ENSMUSG00000092470.2	novel	3811	16	NA	NA	48889	-5078	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	17660646	17658218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_17658200_17660600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009953	chr16	-	1618	1	NIC	ENSMUSG00000003527.10	novel	2785	10	NA	NA	8989	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTTCTATCAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	17720190	17718572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_17718600_17720200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009954	chr16	-	826	3	ISM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	6203	1016	6203	-1016	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGGGTTGGAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	17722976	17719588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17720188_17720681_17720798_17722865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009955	chr16	-	228	1	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	2769	0	2769	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	17743314	17743086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17743100_17743300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009956	chr16	-	373	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	1913	524	1913	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGCAGTAGTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	17744170	17743610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17743792_17743893_17743968_17744052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009957	chr16	-	282	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	1675	825	1675	-825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGGGCCAAAGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	17744408	17743911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17743968_17744052_17744169_17744298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009958	chr16	-	264	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	1476	1011	1476	-1011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGGAAACACACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	17744607	17744097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17744169_17744298_17744404_17744519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009959	chr16	-	323	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	925	1220	925	-1220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCAAGGTACACCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	17745158	17744306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17744404_17744519_17744605_17745017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009960	chr16	-	354	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	564	1927	564	-1927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGAGCCTTTCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	17745519	17745013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17745157_17745230_17745331_17745408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009961	chr16	-	364	3	ISM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	43	2179	43	-2179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTACGGCTCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	17746040	17745265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_17745331_17745408_17745517_17745849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009962	chr16	+	1088	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTCCTAGTGACTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	17884266	17889229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009963	chr16	+	877	4	FSM	ENSMUSG00000003531.16	ENSMUST00000155387.8	1415	4	264	274	264	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGATCCTTTCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	17884575	17889222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_17884721_17887287_17887389_17887945_17888096_17888741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009964	chr16	-	641	1	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	12381	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTCTCTTGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	17890229	17889588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_17889600_17890200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009965	chr16	-	446	1	ISM	ENSMUSG00000060166.7	ENSMUST00000076957.7	4868	11	13633	305	13507	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGTGCACCATGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	18039367	18038921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18038900_18039400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009966	chr16	-	796	2	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	10402	241	10402	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACCTGCTGCAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	18042472	18039163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18039569_18042081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009967	chr16	-	513	2	ISM	ENSMUSG00000060166.7	ENSMUST00000076957.7	4868	11	10442	2589	10316	-2283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGGGCAGTCCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	18042558	18041205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18041242_18042081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009968	chr16	-	768	4	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	7821	3757	7821	-3757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCTGGGCCATCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	18045053	18042679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18043080_18044322_18044433_18044509_18044631_18044916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009969	chr16	-	406	3	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	6537	6747	6537	-6747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGCGGGGCCGCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	18046337	18045669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18045743_18045922_18046096_18046177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009970	chr16	-	413	3	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	6294	7000	6294	-7000	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTGTCTTCAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	18046580	18045922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18046096_18046177_18046336_18046498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009971	chr16	-	1082	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	18066593	18057647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009972	chr16	-	292	1	ISM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	8639	18	7974	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGAAAACCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	18057957	18057665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18057700_18058000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009973	chr16	+	908	2	ISM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	9	3469	9	-3469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGGTGCTGACATC	NA	NA	NA	NA	NA	NA	NA	NA	18066755	18067897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18067116_18067349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009974	chr16	+	839	3	ISM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	424	2501	424	-2501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGACCTTGCCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	18067349	18068865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18067898_18068317_18068427_18068683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009975	chr16	-	447	1	ISM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	34852	0	34852	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	18072258	18071811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18071800_18072300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009976	chr16	-	732	1	Genic_Genomic	ENSMUSG00000013539.15	novel	NA	NA	NA	NA	22900	3	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTGGCTTTTTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	18119419	18118687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_18118700_18119400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009977	chr16	-	1041	5	ISM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	33081	108	13494	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATCTTCAACCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	18128825	18118798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009978	chr16	-	534	5	ISM	ENSMUSG00000013539.15	ENST00000420290.6	572	6	19482	0	4	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGTTCCAAGGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	18142315	18119291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18119417_18120549_18120655_18130502_18130623_18134509_18134599_18142220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009979	chr16	-	234	2	ISM	ENSMUSG00000013539.15	ENST00000401886.5	692	6	11696	2296	11696	-2296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCACTCAGCTCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	18130623	18121587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18121701_18130502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009980	chr16	-	1170	1	Genic_Genomic	ENSMUSG00000000326.14	novel	NA	NA	NA	NA	5451	12	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTATTCTTTTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	18226793	18225623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_18225600_18226800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009981	chr16	-	1444	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	136	-183	136	-95	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATCTTTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	18245218	18226110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009982	chr16	-	611	3	ISM	ENSMUSG00000000326.14	ENSMUST00000165430.8	1978	5	32	4289	32	-3631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCCATCACCCAGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	18232212	18229924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18230071_18230439_18230708_18232015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009983	chr16	+	494	4	FSM	ENSMUSG00000075704.18	ENSMUST00000126778.8	491	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCCCTGACTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	18247445	18256562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_18247506_18248560_18248627_18255310_18255368_18256251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009984	chr16	+	667	6	ISM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	31248	-1	31248	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCCAATAGAAGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	18287497	18296569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009985	chr16	+	721	1	NIC	ENSMUSG00000086965.2	novel	865	3	NA	NA	2037	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTGAGTACCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	18319687	18320408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_18319700_18320400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009986	chr16	+	2939	3	ISM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	49227	-1	7634	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAGACTTGATTTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	18366864	18385430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18366942_18371116_18371333_18382784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009987	chr16	+	477	2	ISM	ENSMUSG00000000884.18	ENST00000329517.11	957	6	11883	0	11883	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGGGACACTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	18371113	18383038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18371337_18382784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009988	chr16	-	1282	1	ISM	ENSMUSG00000009097.11	ENSMUST00000232335.2	2511	7	4709	0	4709	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGCCTTCTGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	18401010	18399728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_18399700_18401000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009989	chr16	+	1198	3	ISM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	14724	-1	12189	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATATGGTATGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	18645767	18654012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18645857_18646385_18646468_18652985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009990	chr16	+	1029	1	Genic_Genomic	ENSMUSG00000005262.14	novel	NA	NA	NA	NA	19405	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATATGGTATGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	18652983	18654012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_18653000_18654000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009991	chr16	+	450	2	ISM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	195	722	192	-607	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGAGAACATCAACACCA	NA	NA	NA	NA	NA	NA	NA	NA	18655522	18658188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18655624_18657839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009992	chr16	+	364	1	Genic_Genomic	ENSMUSG00000071632.11	novel	NA	NA	NA	NA	3218	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTCAATTAGGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	18658548	18658912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_18658500_18658900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009993	chr16	-	1280	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCGTTTATTTTAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	18695610	18690765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009994	chr16	+	559	5	ISM	ENSMUSG00000022702.17	ENSMUST00000120532.9	2044	13	22394	8929	22158	-8929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGGTAAGTGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	18718180	18737832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009995	chr16	+	559	5	ISM	ENSMUSG00000022702.17	ENSMUST00000120532.9	2044	13	39483	2184	39247	-2184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTCAATGGGGAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	18735269	18744577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009996	chr16	+	562	1	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	92682	0	92475	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	18788497	18789059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_18788500_18789100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009997	chr16	-	246	1	FSM	ENSMUSG00000061361.3	ENSMUST00000078554.2	939	1	698	-5	698	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAATCCTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	19348970	19348724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_19348700_19349000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009998	chr16	-	910	3	FSM	ENSMUSG00000075330.5	ENSMUST00000231564.2	902	3	-4	-4	-4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTCATGTTTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	19703028	19695430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_19695861_19702442_19702568_19702673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000009999	chr16	+	905	4	ISM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	501	18419	501	-11172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAAGGTAAGACATATGC	NA	NA	NA	NA	NA	NA	NA	NA	19925974	19936799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_19926394_19933310_19933496_19934633_19934753_19936617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010000	chr16	+	542	3	ISM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	9158	16127	9158	-8880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCTGATTATTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	19934631	19939091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_19934753_19936617_19936807_19938859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010001	chr16	+	429	3	ISM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	11177	0	11177	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGCTCTCAAGAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	19936650	19955218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_19936807_19938859_19939092_19955177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010002	chr16	-	266	1	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	21728	2	21728	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20098835	20098569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_20098600_20098800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010003	chr16	-	471	3	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	18783	2	18783	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20101780	20098569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_20098836_20101472_20101571_20101673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010004	chr16	-	401	4	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	14744	2925	14744	-2923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGCTCTCTTTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	20105819	20101492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_20101571_20101673_20101776_20104514_20104586_20105669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010005	chr16	-	358	4	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	13889	3139	13889	-3137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCCCTGTCTTCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	20106674	20101706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_20101776_20104514_20104586_20105669_20105820_20106606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010006	chr16	-	490	4	ISM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	3479	8039	3479	-8037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTCAGTTGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20117084	20106606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_20106703_20112103_20112153_20116342_20116484_20116880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010007	chr16	-	450	3	ISM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	-1	17840	-1	-17840	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGCATAAAAGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	20121138	20116409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_20116484_20116880_20117077_20120958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010008	chr16	+	359	2	ISM	ENSMUSG00000003233.13	ENSMUST00000171774.2	2319	15	-39	9321	3	-9321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAGCCTGCAGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	20335816	20341075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20336106_20341005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010009	chr16	+	479	2	ISM	ENSMUSG00000003233.13	ENSMUST00000171774.2	2319	15	13763	212	13763	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCGGAACTGACGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	20349618	20350184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20349743_20349829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010010	chr16	+	382	2	ISM	ENSMUSG00000003233.13	ENSMUST00000171572.9	3983	16	14293	1479	14251	860	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACGTGAGTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20350106	20351281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20350241_20351033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010011	chr16	+	267	1	ISM	ENSMUSG00000003233.13	ENSMUST00000171572.9	3983	16	16680	0	16638	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	20352493	20352760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20352500_20352800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010012	chr16	+	555	4	ISM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	4	3672	2	-3672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATCACCCAGCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	20354231	20359134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010013	chr16	+	555	4	ISM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	3890	2717	3888	-2717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCAAGAGGTACCGGT	NA	NA	NA	NA	NA	NA	NA	NA	20358117	20360089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20358324_20359082_20359166_20359724_20359861_20359959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010014	chr16	+	975	5	ISM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	6296	210	6294	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCGTTTTGTACACGTG	NA	NA	NA	NA	NA	NA	NA	NA	20360523	20362596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010015	chr16	+	591	1	Genic_Genomic	ENSMUSG00000022841.16	novel	NA	NA	NA	NA	8863	24	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATCCCCATGTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	20363092	20363683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_20363100_20363700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010016	chr16	+	1039	2	ISM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	11605	73	11605	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAATTGTCTAACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	20378931	20380056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20379021_20379106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010017	chr16	+	987	1	Genic_Genomic	ENSMUSG00000003234.17	novel	NA	NA	NA	NA	11820	4	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGCAAGAGCATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	20379146	20380133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_20379100_20380100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010018	chr16	+	1126	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	8	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTGCTTTATGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20430350	20437761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_20430571_20436375_20436660_20437139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010019	chr16	+	821	2	NNC	ENSMUSG00000115219.3	novel	1134	3	NA	NA	6105	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTGCTTTATGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20436455	20437761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_20436655_20437139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010020	chr16	-	1070	2	FSM	ENSMUSG00000051146.4	ENSMUST00000052939.4	1291	2	221	0	221	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGCTGCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	20439816	20437964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_20438994_20439775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010021	chr16	+	352	2	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	789	13965	789	-13965	internal_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACTGTCAATCGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	20449529	20450067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20449661_20449846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010022	chr16	+	343	2	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	1104	12626	1104	-12626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGGCACTGGGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	20449844	20451406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20450063_20451281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010023	chr16	+	341	3	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	2540	12165	2540	-12165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACTTCCTAGTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	20451280	20451867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20451407_20451497_20451645_20451799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010024	chr16	+	365	3	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	3095	6477	3095	-6477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGGGGAATTGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	20451835	20457555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20451866_20456410_20456600_20457409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010025	chr16	+	347	3	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	7770	5996	7770	-5996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTATCTGGCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	20456510	20458036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20456600_20457409_20457553_20457921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010026	chr16	+	305	3	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	9202	2908	9202	-2908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATGGCTGTGTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	20457942	20461124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20458037_20459364_20459476_20461024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010027	chr16	+	386	4	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	10622	1841	10622	-1841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGACCAGTGAGAATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	20459362	20462191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20459476_20461024_20461124_20461222_20461301_20462095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010028	chr16	+	217	2	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	13354	1548	13354	-1548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGGCAGGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	20462094	20462484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20462200_20462372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010029	chr16	+	290	3	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	13713	1023	13713	-1023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGGGTCCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	20462453	20463009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20462484_20462602_20462671_20462817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010030	chr16	+	543	3	ISM	ENSMUSG00000115293.3	ENSMUST00000079600.12	3325	19	32440	603	32440	-603	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGTTGTCTCTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	20462814	20464062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20463009_20463090_20463187_20463809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010031	chr16	+	293	1	ISM	ENSMUSG00000115293.3	ENSMUST00000120394.8	3432	20	34006	12	33991	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATCAGCCAGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	20464365	20464658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20464400_20464700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010032	chr16	+	176	2	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	362	18561	362	-18228	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGGCTTGAGTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	20492628	20493070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20492712_20492977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010033	chr16	+	961	3	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	5068	12865	5068	-12532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCAGGGTAAGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	20497334	20498766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20497425_20497633_20497701_20497962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010034	chr16	+	974	3	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	5364	12078	5364	-11745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGTAAGAATTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	20497630	20499553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20497701_20497962_20498776_20499462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010035	chr16	+	1059	3	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	5695	11836	5695	-11503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGGAGCAGAAGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	20497961	20499795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20498776_20499462_20499552_20499639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010036	chr16	+	678	4	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	8307	9230	8307	-8897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTAGAGGTCCTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	20500573	20502401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20500673_20500791_20500990_20501408_20501556_20502167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010037	chr16	+	945	4	ISM	ENSMUSG00000045983.17	ENSMUST00000115460.8	5638	32	15264	-2	15264	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	20507530	20511633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20507616_20507720_20507803_20507941_20508083_20510996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010038	chr16	+	637	1	ISM	ENSMUSG00000045983.17	ENSMUST00000044783.14	5444	33	19524	1	18730	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	20510996	20511633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20511000_20511600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010039	chr16	+	2040	3	FSM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	10	231	10	-229	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGGCAGGGCGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	20517669	20521565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_20518201_20518378_20518496_20520173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010040	chr16	+	1420	1	ISM	ENSMUSG00000050821.15	ENSMUST00000056518.13	2432	6	6719	2	2717	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACATCTTGTCATTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	20520376	20521796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20520400_20521800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010041	chr16	+	1092	4	FSM	ENSMUSG00000021018.9	ENST00000430783.5	1094	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCATTGTCATTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	20536190	20541019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20540659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010042	chr16	+	622	4	ISM	ENSMUSG00000021018.9	ENSMUST00000231392.2	678	5	716	-3	716	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20537571	20541017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_20537658_20537740_20537835_20539268_20539353_20540659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010043	chr16	-	341	1	ISM	ENSMUSG00000022847.16	ENSMUST00000115437.4	2416	6	8678	1039	2953	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCACCACCATGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	20544583	20544242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_20544200_20544600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010044	chr16	-	438	2	ISM	ENSMUSG00000022847.16	ENST00000650229.1	896	4	2321	295	2321	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTCAGCTAAATCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	20545215	20544537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_20544816_20545055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010045	chr16	+	356	2	ISM	ENSMUSG00000005958.16	ENSMUST00000161063.9	4748	17	9340	2073	9340	-2073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAACTAGCCCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	21039184	21039644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_21039293_21039396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010046	chr16	+	333	2	ISM	ENSMUSG00000005958.16	ENSMUST00000161063.9	4748	17	10543	909	10543	-909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATCCTGGCTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	21040387	21040808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_21040527_21040614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010047	chr16	-	1133	2	FSM	ENSMUSG00000043391.11	ENSMUST00000231592.2	1135	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTCTCCTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21513377	21495471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_21496193_21512965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010048	chr16	+	638	3	ISM	ENSMUSG00000097290.10	ENSMUST00000211443.2	767	4	1532	0	1458	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTGAAAGGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	21614599	21627790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_21614726_21625720_21625870_21627427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010049	chr16	+	653	1	Genic_Genomic	ENSMUSG00000117327.2	novel	NA	NA	NA	NA	32	74	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTAAAAGAAGGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21715287	21715940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_21715300_21715900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010050	chr16	-	1206	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	154	0	154	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	21766148	21753075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010051	chr16	-	786	4	ISM	ENSMUSG00000044626.14	ENST00000296252.9	1617	9	18217	0	18217	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACACCCTCAGGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	21784804	21774528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010052	chr16	+	2388	1	ISM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	37398	0	37398	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGCTTTATGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21865631	21868019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_21865600_21868000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010053	chr16	-	414	1	ISM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	103877	0	101885	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	21878172	21877758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21877800_21878200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010054	chr16	-	341	3	ISM	ENSMUSG00000033581.18	ENST00000440915.1	1399	13	97592	1	97592	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCCACAGCACCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	21882465	21879542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21879636_21880609_21880724_21882331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010055	chr16	-	303	3	ISM	ENSMUSG00000033581.18	ENSMUST00000115379.2	3078	15	96281	2420	96138	-1087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTTTTTTGCTAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21883919	21880629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21880724_21882331_21882464_21883842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010056	chr16	-	292	3	ISM	ENSMUSG00000033581.18	ENSMUST00000115379.2	3078	15	93225	4120	93082	-2787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGCTCCTGATTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	21886975	21882329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21882464_21883842_21883918_21886892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010057	chr16	-	395	3	ISM	ENSMUSG00000033581.18	ENST00000440915.1	1399	13	81105	17824	81105	-17823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCCCGGTCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	21898952	21897365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21897502_21898233_21898357_21898816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010058	chr16	-	505	3	ISM	ENSMUSG00000033581.18	ENST00000440915.1	1399	13	79322	18697	79322	-18696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCGTAAGCTACCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	21900735	21898238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21898357_21898816_21898952_21900483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010059	chr16	-	351	3	ISM	ENSMUSG00000033581.18	ENST00000440915.1	1399	13	77318	19377	77318	-19376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGAGAAGCCTGTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	21902739	21898918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21898952_21900483_21900736_21902673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010060	chr16	-	398	4	ISM	ENSMUSG00000033581.18	ENST00000440915.1	1399	13	72195	20963	72195	-20962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGCAGACCCAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	21907862	21900504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_21900736_21902673_21902738_21906277_21906330_21907811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010061	chr16	-	961	1	Genic_Genomic	ENSMUSG00000022858.17	novel	NA	NA	NA	NA	9739	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAATGAATACGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	22064258	22063297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_22063300_22064300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010062	chr16	-	1009	3	ISM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	6753	-457	6753	457	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTTCATTTTTTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	22067244	22064740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22065617_22065939_22066014_22067185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010063	chr16	-	675	6	ISM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	692	738	692	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTTGATGGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	22073305	22065935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010064	chr16	-	854	6	ISM	ENSMUSG00000022858.17	ENST00000382191.4	947	7	0	1265	0	-1265	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGATCAGATTTACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	22084749	22067202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22084490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010065	chr16	+	318	1	FSM	ENSMUSG00000082241.5	ENSMUST00000120931.2	205	1	134	-247	134	247	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATCCAGGAGAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	22113910	22114228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_22113900_22114200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010066	chr16	-	529	3	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	175232	-253	175002	253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGCCTGCAGGAGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	22300739	22287718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22288098_22298115_22298177_22300650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010067	chr16	-	415	4	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	137622	10144	137392	-10144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGCCAGTCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	22338349	22298115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22298177_22300650_22300772_22318973_22319152_22338294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010068	chr16	-	393	4	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	94448	79429	94218	-79429	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCGAGCTCGCTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	22381523	22367400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22367467_22375075_22375237_22376766_22376857_22381447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010069	chr16	-	393	4	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	68779	110520	68549	-110520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCAGTAACTACATCCA	NA	NA	NA	NA	NA	NA	NA	NA	22407192	22398491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22398616_22399272_22399348_22403184_22403235_22407048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010070	chr16	-	451	3	ISM	ENSMUSG00000022861.18	ENSMUST00000023578.14	2725	24	34783	131253	34553	-131253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGGGGCCAGCAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	22441188	22419224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22419355_22429528_22429606_22440944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010071	chr16	-	134	1	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	44317	5	44315	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTACTGTGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	22632102	22631968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_22632000_22632100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010072	chr16	-	597	1	Genic_Genomic	ENSMUSG00000090021.3	novel	NA	NA	NA	NA	2254	20	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAAAACTAGGGGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	22833534	22832937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_22832900_22833500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010073	chr16	-	302	2	NNC	ENSMUSG00000090021.3	novel	2639	2	NA	NA	2252	-181	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATATTTTTTTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	22833536	22833138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_22833317_22833412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010074	chr16	-	332	2	NNC	ENSMUSG00000090021.3	novel	2639	2	NA	NA	44	-2252	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGATTCCGAAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	22835744	22835209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_22835339_22835541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010075	chr16	+	953	3	FSM	ENSMUSG00000022884.17	ENST00000471496.5	954	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATGTCTTAATGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	22929321	22932645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_22929474_22930270_22930343_22931916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010076	chr16	+	785	3	ISM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	4054	171	927	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGTATTTATTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	22930247	22932526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_22930343_22930566_22930647_22931916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010077	chr16	+	1310	2	ISM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	4057	367	1245	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGAAATGGTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	22930565	22932329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_22930647_22931100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010078	chr16	+	1308	1	NIC	ENSMUSG00000022884.17	novel	2203	10	NA	NA	2071	2	mono-exon	FALSE	NA	NA	NA	NA	NA	906	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGGTCTGGCCATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	22931391	22932699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_22931400_22932700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010079	chr16	+	466	4	ISM	ENSMUSG00000022885.17	ENST00000457772.6	1091	5	17	1853	17	-1853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCCCCATCCTCCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	23136328	23175107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_23136449_23147091_23147190_23173615_23173715_23174958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010080	chr16	+	706	3	ISM	ENSMUSG00000022885.17	ENST00000457772.6	1091	5	37302	152	37302	-152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTATGGGAGCCCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	23173613	23176808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_23173715_23174958_23175134_23176378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010081	chr16	+	477	1	ISM	ENSMUSG00000022885.17	ENSMUST00000023601.14	4506	8	132995	2137	40173	1	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCTTCCGTGGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	23176484	23176961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_23176500_23177000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010082	chr16	-	1467	1	Genic_Genomic	ENSMUSG00000022887.10	novel	NA	NA	NA	NA	50821	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCTTGAGAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	23288577	23287110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_23287100_23288600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010083	chr16	-	1481	2	ISM	ENSMUSG00000022887.10	ENST00000392472.6	2133	10	45819	-561	45697	561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTAAAAGCTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	23293701	23288077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_23289481_23293623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010084	chr16	+	1032	4	FSM	ENSMUSG00000109783.2	ENSMUST00000210658.2	1105	4	14	59	14	-59	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGGCCTGTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	23339024	23353782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_23339225_23340436_23340704_23346244_23346357_23353329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010085	chr16	+	548	2	ISM	ENSMUSG00000109783.2	ENSMUST00000210795.2	728	4	34290	1	34290	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGGTGTTTACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23373444	23378830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_23373684_23378521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010086	chr16	+	964	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	679	-674	679	674	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAACTAGCTAATAAACC	NA	NA	NA	NA	NA	NA	NA	NA	24348822	24349786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_24348800_24349800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010087	chr16	+	1648	1	ISM	ENSMUSG00000033306.16	ENSMUST00000038053.14	15459	13	597391	0	269076	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCTGTGTGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	24809680	24811328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_24809700_24811300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010088	chr16	+	353	3	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	-1	25507	-1	-4057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAGAGGGCAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25620808	25682547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25620852_25681028_25681216_25682424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010089	chr16	+	415	3	ISM	ENSMUSG00000022510.15	ENSMUST00000115304.8	2634	6	60361	2498	60217	-2498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGCAGTGAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	25681026	25684106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25681216_25682424_25682541_25683996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010090	chr16	+	364	3	ISM	ENSMUSG00000022510.15	ENSMUST00000115304.8	2634	6	61758	1643	61614	-1643	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGATGTAGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	25682423	25684961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25682541_25683996_25684107_25684824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010091	chr16	+	472	4	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	63328	6009	63184	3281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGTCACTGTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25683993	25689885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25684107_25684824_25684962_25686916_25687000_25689746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010092	chr16	+	380	3	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	66105	6620	66105	4793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCACACCTCTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	25686914	25701434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25687000_25689746_25689884_25701276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010093	chr16	+	1199	2	ISM	ENSMUSG00000022510.15	ENSMUST00000115305.2	1729	9	69081	-544	68937	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCCTTTTAAAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	25689746	25696438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25689884_25695376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010094	chr16	+	429	3	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	68948	4349	68948	-4349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCACAGCACGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25689757	25703705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25689884_25701276_25701435_25703560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010095	chr16	+	1073	1	ISM	ENSMUSG00000022510.15	ENST00000418709.6	2640	11	192555	0	74759	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTAGTTTTTGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25695568	25696641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25695600_25696600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010096	chr16	+	398	3	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	80467	3004	80467	-3004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAACGGCTAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	25701276	25705050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25701435_25703560_25703706_25704955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010097	chr16	+	536	3	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	82751	0	82751	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCATTGCGGGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25703560	25708054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_25703706_25704955_25705050_25707757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010098	chr16	+	299	1	NIC	ENSMUSG00000022510.15	novel	5257	13	NA	NA	86947	1	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCATTGCGGGGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	25707756	25708055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_25707800_25708100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010099	chr16	+	3014	2	ISM	ENSMUSG00000038127.16	ENSMUST00000096127.11	1096	10	55574	-2783	55574	2781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAAGTGGTTAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	27263303	27267914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_27263401_27264997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010100	chr16	+	3006	1	ISM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	60344	0	60233	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCCTACTGTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	27267962	27270968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_27268000_27271000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010101	chr16	+	514	2	ISM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	-32	65569	0	-65569	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGGAGGTGGCTATACA	NA	NA	NA	NA	NA	NA	NA	NA	29398165	29405125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29398390_29404835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010102	chr16	+	353	2	ISM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	38	65710	38	-64836	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATTGATGAGTATATTG	NA	NA	NA	NA	NA	NA	NA	NA	29404872	29405858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29405155_29405787
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010103	chr16	+	250	3	ISM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	16193	44979	16193	-44105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGGAAAATAGACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	29421027	29426589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29421084_29424329_29424435_29426500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010104	chr16	+	256	3	ISM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	28107	36779	28107	-35905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGTCCAAATGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29432941	29434789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29433017_29433866_29433983_29434724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010105	chr16	+	364	4	ISM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	29095	34460	29095	-33586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATATAATGTAACTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	29433929	29437108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29433983_29434724_29434790_29435432_29435510_29436939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010106	chr16	+	320	2	ISM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	32104	32217	32104	-31343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATACAGCTCTGTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	29436938	29439351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29437106_29439198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010107	chr16	+	302	3	ISM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	39445	23083	39445	-22209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCGCTATCACTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	29444279	29448485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29444423_29447514_29447632_29448443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010108	chr16	+	1271	3	ISM	ENSMUSG00000038084.17	ENST00000646793.1	3837	27	44065	0	44065	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTGGTAAAAACACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29448899	29471661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29449013_29467754_29467823_29470571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010109	chr16	+	3091	1	ISM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	72460	0	65777	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTTTCTCCCTACACT	NA	NA	NA	NA	NA	NA	NA	NA	29470611	29473702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_29470600_29473700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010110	chr16	+	1392	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	76	0	76	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	29884233	29886614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010111	chr16	+	926	1	NIC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	1531	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	29885688	29886614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_29885700_29886600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010112	chr16	-	1200	1	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	53284	0	53284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	30132440	30131240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_30131200_30132400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010113	chr16	-	1705	2	ISM	ENSMUSG00000022533.15	ENST00000642744.1	6683	31	51189	1305	51189	-1305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTAAATACTGAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	30134535	30132545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_30133544_30133828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010114	chr16	-	659	1	ISM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	36229	0	36158	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGCTCTCGGCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	30333167	30332508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_30332500_30333200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010115	chr16	-	544	4	ISM	ENSMUSG00000022537.19	ENST00000381975.7	1206	10	6674	24614	6674	-24614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCCAGGACGGAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	30362651	30358227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_30358357_30359556_30359728_30362219_30362307_30362494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010116	chr16	-	533	1	Genic_Genomic	ENSMUSG00000022538.21	novel	NA	NA	NA	NA	26568	2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTTAAGAAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	30379842	30379309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_30379300_30379800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010117	chr16	-	649	2	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	22773	894	22773	-894	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTAATTTTCCACTAG	NA	NA	NA	NA	NA	NA	NA	NA	30383637	30380205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_30380681_30383463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010118	chr16	-	529	2	ISM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	14222	10692	14222	-10692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGCTAACTGTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	30392188	30390003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_30390355_30392010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010119	chr16	-	2578	1	Genic_Genomic	ENSMUSG00000047714.15	novel	NA	NA	NA	NA	20879	1	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTCTTTTTAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	31072931	31070353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_31070400_31072900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010120	chr16	-	2876	4	ISM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	13980	652	13695	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACTGCTGAAAACAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	31080115	31071006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010121	chr16	-	2578	2	NNC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	16542	-738	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACAGCATGCTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	31077268	31071092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_31073552_31077149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010122	chr16	-	813	4	ISM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	9578	0	9578	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGCTTTGTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31084232	31076792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010123	chr16	+	347	3	ISM	ENSMUSG00000022770.18	ENST00000656944.1	2716	24	1	187491	1	-187491	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTAAGAGAAAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	31483636	31503108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31483689_31484392_31484525_31502945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010124	chr16	+	522	4	ISM	ENSMUSG00000022770.18	ENST00000656944.1	2716	24	755	89944	753	-89944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTACTTCACCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	31484390	31600655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31484525_31502945_31503113_31561923_31562089_31600599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010125	chr16	+	409	5	ISM	ENSMUSG00000022770.18	ENST00000656944.1	2716	24	19385	81558	19383	-81558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACATTGGAGATGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31503020	31609041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010126	chr16	+	630	5	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	33620	75113	33297	-74771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTTAGCGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	31606897	31615828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010127	chr16	+	425	3	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	42406	59297	42083	-58955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGATACCTGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	31615683	31631644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31615829_31624431_31624553_31631485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010128	chr16	+	382	3	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	51154	42554	50831	-42212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACGGTTTTGTCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	31624431	31648387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31624553_31631485_31631643_31648283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010129	chr16	+	556	4	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	58204	33897	57881	-33555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATGGTGTTTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	31631481	31657044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31631643_31648283_31648387_31655007_31655123_31656867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010130	chr16	+	281	3	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	83590	24454	83267	-24112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGATCAAAATACTCC	NA	NA	NA	NA	NA	NA	NA	NA	31656867	31666487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31657045_31661587_31661658_31666453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010131	chr16	+	327	3	ISM	ENSMUSG00000022770.18	ENST00000452595.5	3035	21	101981	14058	101658	-13716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCACCAGGCCACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	31675258	31676883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31675310_31676364_31676467_31676709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010132	chr16	+	1808	4	ISM	ENSMUSG00000022770.18	ENST00000660553.1	3730	22	103115	-65	103109	65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCACAGGTGTTAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	31676709	31691925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31676883_31681990_31682101_31686648_31686741_31690492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010133	chr16	+	1685	1	ISM	ENSMUSG00000022770.18	ENSMUST00000115205.9	6143	26	208252	1750	116912	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTTTAATAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	31690512	31692197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31690500_31692200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010134	chr16	-	745	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	700	0	700	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTTCTTGGTCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	31766612	31765867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_31765900_31766600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010135	chr16	+	395	2	ISM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	2	4166	2	-4166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCTTCTCAGGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	31767332	31773124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31767546_31772942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010136	chr16	+	582	3	ISM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	5628	1257	5535	-1257	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGGCAACAGACACAATC	NA	NA	NA	NA	NA	NA	NA	NA	31772958	31776033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31773125_31775108_31775248_31775756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010137	chr16	+	313	1	ISM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	9647	0	9554	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTATTTCCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	31776977	31777290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_31777000_31777300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010138	chr16	-	1948	1	ISM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	41668	0	41544	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTCTGTTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	31780437	31778489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_31778500_31780400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010139	chr16	-	729	1	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	62324	0	62324	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAATTTCCATTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31835836	31835107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_31835100_31835800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010140	chr16	-	739	2	ISM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	57430	3377	57430	-3377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCCTATAGAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	31840730	31838484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_31839085_31840591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010141	chr16	-	432	3	ISM	ENSMUSG00000023791.19	ENSMUST00000189013.8	982	6	12314	-2	12314	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTTTGTCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	31906231	31903233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_31903445_31904054_31904156_31906111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010142	chr16	+	1504	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	216	-2	64	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTCTTCAGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	31918833	31926889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010143	chr16	+	1167	1	Genic_Genomic	ENSMUSG00000035790.16	novel	NA	NA	NA	NA	3026	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTTCTTCAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	31925721	31926888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_31925700_31926900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010144	chr16	+	763	2	ISM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	12	4759	12	-4750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGCAAAGAGCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32066082	32071142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32066344_32070640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010145	chr16	+	1124	2	ISM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	4567	0	4567	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAATTTTGGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32070637	32075901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32071137_32075276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010146	chr16	+	334	1	ISM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	9493	4	9493	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGTAATTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32075563	32075897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32075600_32075900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010147	chr16	+	284	2	ISM	ENSMUSG00000079625.3	ENST00000454715.5	521	3	17	345	17	-345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGAAATTCGGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	32224698	32226482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32224855_32226354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010148	chr16	+	273	2	ISM	ENSMUSG00000079625.3	ENST00000454715.5	521	3	1708	40	1708	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAGCATCCTCGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	32226389	32226787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32226525_32226649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010149	chr16	+	170	1	ISM	ENSMUSG00000079625.3	ENSMUST00000115149.3	1257	5	7336	216	1978	2	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTAACGGATGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	32226659	32226829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32226700_32226800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010150	chr16	+	269	2	NNC	ENSMUSG00000014075.16	novel	720	4	NA	NA	49	-6144	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAACATGGGCTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	32238612	32241769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_32238750_32241637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010151	chr16	+	271	3	ISM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	3116	2177	3072	-2173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCTTGGGAAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32241635	32245740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32241772_32244058_32244129_32245675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010152	chr16	+	406	2	ISM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	7110	0	7110	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTCATGAATAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32245673	32247913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32245740_32247573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010153	chr16	+	176	1	ISM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	9222	0	9178	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	32247741	32247917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32247700_32247900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010154	chr16	+	395	2	ISM	ENSMUSG00000005615.16	ENSMUST00000104893.10	1275	9	38910	8	38910	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAACCGGGGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	32288976	32290428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32289058_32290114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010155	chr16	+	365	1	Genic_Genomic	ENSMUSG00000005615.16	novel	NA	NA	NA	NA	43459	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGGTTTTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	32293525	32293890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_32293500_32293900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010156	chr16	+	1046	1	Genic_Genomic	ENSMUSG00000116957.2	novel	NA	NA	NA	NA	2494	42	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	32371522	32372568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_32371500_32372600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010157	chr16	+	1294	2	ISM	ENSMUSG00000022800.15	ENSMUST00000120345.2	648	6	19437	-1068	19437	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGAAGTTACATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	32722788	32727068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32722916_32725901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010158	chr16	+	1217	1	Genic_Genomic	ENSMUSG00000022800.15	novel	NA	NA	NA	NA	24684	7	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCCATATATTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	32728035	32729252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_32728000_32729300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010159	chr16	+	492	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	32876821	32880559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010160	chr16	+	490	5	NNC	ENSMUSG00000060636.15	novel	491	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTCTTTGTTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	32876822	32880561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879191_32880467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010161	chr16	+	491	5	NNC	ENSMUSG00000060636.15	novel	491	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	32876823	32880559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_32876881_32877505_32877549_32877759_32877917_32879048_32879191_32880467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010162	chr16	+	252	3	ISM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	4	2664	4	-2644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTGCTTATGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	32876839	32877882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32876926_32877505_32877549_32877759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010163	chr16	+	494	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	32876902	32880535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010164	chr16	+	119	2	ISM	ENSMUSG00000022802.3	ENST00000448030.1	509	5	2102	3224	2102	-3224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGGAGAGATTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	32903400	32908507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32903484_32908471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010165	chr16	+	156	2	ISM	ENSMUSG00000022802.3	ENST00000448030.1	509	5	7208	2028	7208	-2028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGGAGCTGAACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	32908506	32909703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32908594_32909634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010166	chr16	+	120	2	ISM	ENSMUSG00000022802.3	ENST00000448030.1	509	5	8368	32	8368	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGATCACTCTGGCGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	32909666	32911699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_32909743_32911655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010167	chr16	+	1118	3	ISM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	40316	963	40316	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGTGATTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	33112129	33119676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33112257_33115010_33115126_33118800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010168	chr16	+	937	1	Genic_Genomic	ENSMUSG00000022808.6	novel	NA	NA	NA	NA	47893	4	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATAAGGTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	33119706	33120643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_33119700_33120600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010169	chr16	+	955	4	NNC	ENSMUSG00000022811.18	novel	1008	5	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTCGCACAATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33201266	33317984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_33201398_33241690_33241777_33288422_33288558_33317381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010170	chr16	+	925	5	FSM	ENSMUSG00000022811.18	ENST00000468369.5	1008	5	83	0	56	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTCGCACAATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33201303	33317984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_33201398_33241690_33241777_33288422_33288554_33315714_33315745_33317400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010171	chr16	+	783	4	NIC	ENSMUSG00000022811.18	novel	1008	5	NA	NA	20875	-32	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATCAGAACCTTGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	33241689	33317939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_33241773_33288422_33288554_33315714_33315745_33317400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010172	chr16	+	1063	5	ISM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	56536	2183	56536	-896	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGCCGCCGTGGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	33277350	33316830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010173	chr16	-	738	2	Antisense	novelGene_ENSMUSG00000022811.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTCATACTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	33317984	33288422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr16_-_33288561_33317384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010174	chr16	+	704	2	NNC	ENSMUSG00000022811.18	novel	1008	5	NA	NA	67628	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTCGCACAATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33288442	33317984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_33288563_33317400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010175	chr16	+	735	1	ISM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	116046	6747	96437	2	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGCACAATTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	33317251	33317986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33317300_33318000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010176	chr16	+	2344	1	ISM	ENSMUSG00000075254.13	ENSMUST00000152782.8	8161	15	84767	0	13683	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTGTAAGTGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	33589602	33591946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33589600_33591900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010177	chr16	+	339	2	ISM	ENSMUSG00000022817.16	ENSMUST00000069345.6	3056	15	35790	73199	-26474	-73199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTAACTTCCGCTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	33685836	33696324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33686023_33696171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010178	chr16	+	317	2	ISM	ENSMUSG00000022817.16	ENSMUST00000069345.6	3056	15	46228	64031	-16036	-64031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACACCCAAGCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	33696274	33705492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33696422_33705322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010179	chr16	+	359	2	ISM	ENSMUSG00000022817.16	ENSMUST00000232262.2	2130	11	18588	29081	18588	-29081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAGCCTCTGTGCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	33730898	33740442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33730970_33740154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010180	chr16	+	333	2	ISM	ENSMUSG00000022817.16	ENSMUST00000232262.2	2130	11	28004	8601	28004	-8601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTCAACAGACGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	33740314	33760922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33740585_33760859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010181	chr16	+	344	3	ISM	ENSMUSG00000022817.16	ENSMUST00000232262.2	2130	11	52206	1273	52206	-1273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGAGGGGGTGGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	33764516	33768250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33764575_33766860_33766981_33768084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010182	chr16	+	385	2	ISM	ENSMUSG00000022817.16	ENSMUST00000232262.2	2130	11	55770	283	55770	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAAGGGACCTGGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	33768080	33769240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33768252_33769026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010183	chr16	+	306	1	ISM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	119368	0	57092	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTTTGTGTTGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33769402	33769708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_33769400_33769700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010184	chr16	-	1043	1	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	11214	0	11214	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGTCTCCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	33776194	33775151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_33775200_33776200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010185	chr16	-	1911	4	ISM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	4852	1152	4852	-1152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGCACCACCACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	33782556	33776303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010186	chr16	-	586	1	FSM	ENSMUSG00000116835.2	ENSMUST00000231993.2	615	1	22	7	22	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTAATACACGTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	33827805	33827219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_33827200_33827800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010187	chr16	-	748	4	ISM	ENSMUSG00000061751.17	ENST00000682363.1	2982	15	67248	755	67248	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTACCCGGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	33849082	33834317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_33834582_33836761_33837001_33848307_33848480_33849009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010188	chr16	+	846	6	FSM	ENSMUSG00000022832.12	ENST00000405845.7	846	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGCATGTGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	34470317	34498973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_34470392_34487053_34487182_34490266_34490385_34491470_34491633_34497505_34497682_34498785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010189	chr16	+	361	3	ISM	ENSMUSG00000022832.12	ENST00000514116.6	886	6	4	8584	4	-8584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGCTCTAGGGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34470321	34490386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_34470392_34487010_34487182_34490266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010190	chr16	+	829	6	NNC	ENSMUSG00000022832.12	novel	846	6	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGCATGTGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	34470332	34498973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_34470392_34487053_34487182_34490266_34490385_34491470_34491633_34497505_34497680_34498785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010191	chr16	+	515	3	NNC	ENSMUSG00000022832.12	novel	843	6	NA	NA	19922	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTAGCCAGGAGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	34491479	34498967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_34491637_34497505_34497682_34498785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010192	chr16	+	191	1	NIC	ENSMUSG00000022832.12	novel	846	6	NA	NA	27223	1	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAGGAGCATGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	34498780	34498971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_34498800_34499000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010193	chr16	+	896	4	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	1515	17248	1515	-17248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGATGAGCACTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34517472	34527265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_34517546_34525198_34525418_34525530_34525626_34526756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010194	chr16	+	923	4	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	9287	14476	9287	-14476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTGCTCTGGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34525244	34530037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_34525418_34525530_34525626_34526756_34527268_34529893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010195	chr16	+	1180	4	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	19752	375	19752	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGCAGCTTTCTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	34535709	34544138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_34535779_34541808_34542028_34542106_34542240_34543379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010196	chr16	+	836	1	ISM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	32694	1049	27722	2	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTACTGTGGTGCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	34543679	34544515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_34543700_34544500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010197	chr16	+	468	2	ISM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	79569	2523	79569	-2523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGGGGTTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	34922366	34927024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_34922495_34926684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010198	chr16	+	443	1	ISM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	86307	0	86307	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGATCTGGAGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	34929104	34929547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_34929100_34929500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010199	chr16	-	3526	4	ISM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	16133	0	13976	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAACCTTTGCCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	35168155	35131500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010200	chr16	-	643	3	FSM	ENSMUSG00000034473.15	ENST00000481965.6	633	3	-8	-2	-8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGTAAGAAAACTTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	35182139	35134289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_35134658_35139173_35139240_35181930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010201	chr16	+	815	5	ISM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	-59	18824	6	-18824	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGGGAAAACGGAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	35361554	35465799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010202	chr16	+	580	3	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	104160	16932	104160	-16924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCCCCACCCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	35466100	35467699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35466181_35466561_35466776_35467413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010203	chr16	+	588	3	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	104618	14445	104618	-14437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCAGGGCTGCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	35466558	35470186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35466776_35467413_35467700_35470101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010204	chr16	+	558	3	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	105516	12946	105516	-12938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTATCACGTACTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	35467456	35471685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35467700_35470101_35470238_35471506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010205	chr16	+	550	3	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	108161	12576	108161	-12568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAAGCTGAGGCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	35470101	35472055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35470238_35471506_35471715_35471849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010206	chr16	+	720	4	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	109563	5639	109563	-5631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGGCAGGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35471503	35478992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35471715_35471849_35472058_35478566_35478685_35478809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010207	chr16	+	534	4	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	116625	4250	116625	-4242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCAGTCGCGACGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	35478565	35480381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35478685_35478809_35478992_35480019_35480164_35480292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010208	chr16	+	541	4	ISM	ENSMUSG00000052133.17	ENST00000648990.1	4835	22	117286	4105	116894	-4001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCAGGAGCAGCGATTCC	NA	NA	NA	NA	NA	NA	NA	NA	35478834	35480622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35478992_35480019_35480164_35480292_35480438_35480527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010209	chr16	+	739	4	ISM	ENSMUSG00000052133.17	ENST00000648990.1	4835	22	118763	2898	118371	-2794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACTGGGCGCATCGGA	NA	NA	NA	NA	NA	NA	NA	NA	35480311	35481829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35480438_35480527_35480754_35480849_35481069_35481661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010210	chr16	+	533	3	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	118907	2555	118907	-2547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTGGTAGGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	35480847	35482076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35481069_35481661_35481833_35481935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010211	chr16	+	539	4	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	119718	1399	119718	-1391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAGAATGAGAAGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	35481658	35483232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35481833_35481935_35482086_35482659_35482705_35483062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010212	chr16	+	1077	4	ISM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	119993	471	119993	-463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCACAGGGGACCACTC	NA	NA	NA	NA	NA	NA	NA	NA	35481933	35484160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35482086_35482659_35482705_35483062_35483269_35483486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010213	chr16	+	818	1	Genic_Genomic	ENSMUSG00000052133.17	novel	NA	NA	NA	NA	121970	1	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGGAGTTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	35483910	35484728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_35483900_35484700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010214	chr16	-	1585	1	ISM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	73710	0	73710	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAATGTTAAAAATCACAT	NA	NA	NA	NA	NA	NA	NA	NA	35516016	35514431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_35514400_35516000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010215	chr16	+	336	3	ISM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	48306	523	48306	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAGTGGAGCAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	35639050	35645395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35639133_35645058_35645170_35645252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010216	chr16	+	334	1	Genic_Genomic	ENSMUSG00000022849.6	novel	NA	NA	NA	NA	54841	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCCACTTCCAAATC	NA	NA	NA	NA	NA	NA	NA	NA	35645585	35645919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_35645600_35645900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010217	chr16	+	953	2	ISM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	49933	2641	49933	-2641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAACCATCCAATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	35853617	35854860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_35853801_35854090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010218	chr16	+	951	1	Genic_Genomic	ENSMUSG00000022905.13	novel	NA	NA	NA	NA	52873	7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCCTTGGGTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	35856557	35857508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_35856600_35857500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010219	chr16	-	695	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATAGTATTATCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35891862	35864130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010220	chr16	+	1066	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	2	5	2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACATATTTATTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35892056	35912485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010221	chr16	-	727	4	FSM	ENSMUSG00000022901.14	ENST00000393627.6	720	4	0	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGATTTCCTCCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	36462992	36438722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_36438989_36441065_36441402_36449331_36449382_36462917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010222	chr16	-	387	2	NNC	ENSMUSG00000022901.14	novel	720	4	NA	NA	21789	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTCAATGAAGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36441203	36438729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_36438979_36441065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010223	chr16	-	469	2	ISM	ENSMUSG00000022901.14	ENST00000393627.6	720	4	21582	135	21582	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAACTAATGAGTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	36441410	36438864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_36438989_36441065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010224	chr16	+	1216	4	ISM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	14068	2919	14068	-2919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGGGAATGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	36528616	36543012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_36528783_36529840_36529991_36541899_36542032_36542244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010225	chr16	+	820	2	ISM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	27726	0	27726	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGCTTCTTGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	36542274	36545931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_36543042_36545878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010226	chr16	+	4034	2	ISM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	27145	14865	27145	-14865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGACCTAGCGGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	36733640	36738582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_36737363_36738270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010227	chr16	-	2928	4	ISM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	3615	0	3615	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	37356536	37330151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010228	chr16	-	2032	1	NIC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	27968	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	37332183	37330151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_37330200_37332200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010229	chr16	-	553	1	Genic_Genomic	ENSMUSG00000022820.5	novel	NA	NA	NA	NA	6733	2	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCTGGAACGGGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	37468082	37467529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_37467500_37468100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010230	chr16	-	952	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAGGCTGACAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	37474810	37467545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_37468082_37469375_37469523_37474541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010231	chr16	-	510	2	NNC	ENSMUSG00000022820.5	novel	971	3	NA	NA	5295	-180	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGAGTCCTTGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	37469520	37467711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_37468077_37469375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010232	chr16	-	535	3	NNC	ENSMUSG00000022820.5	novel	971	3	NA	NA	112	-328	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGACACATTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	37474703	37467859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_37468082_37469375_37469523_37474537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010233	chr16	+	541	4	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	36	17476	36	-17476	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATGTCATCACTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	37597270	37639400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010234	chr16	+	401	4	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	38831	13783	38831	-13783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAGAGCTGAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	37636065	37643093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37636173_37639265_37639396_37641517_37641551_37642962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010235	chr16	-	248	2	Antisense	novelGene_ENSMUSG00000022816.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGACCAGCAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	37643041	37639263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr16_-_37639414_37642943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010236	chr16	+	246	2	NNC	ENSMUSG00000022816.12	novel	3789	11	NA	NA	42057	-13797	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTACTTTAAGGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	37639291	37643079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_37639421_37642962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010237	chr16	+	286	3	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	44281	9669	44281	-9669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGTGGGTGATTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	37641515	37647207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37641551_37642962_37643094_37647087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010238	chr16	+	360	3	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	45731	7695	45731	-7695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTCCAATCTAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	37642965	37649181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37643094_37647087_37647207_37649068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010239	chr16	+	346	3	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	49851	7289	49851	-7289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCCATACTTAGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	37647085	37649587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37647207_37649068_37649182_37649475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010240	chr16	+	550	4	ISM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	51823	2395	51823	-2395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAATGCTTTAAGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	37649057	37654481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37649182_37649475_37649587_37651918_37651996_37654243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010241	chr16	+	235	3	NNC	ENSMUSG00000022816.12	novel	3789	11	NA	NA	52239	-2585	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCACAGAGCACCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	37649473	37654291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_37649587_37651918_37652000_37654250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010242	chr16	+	245	2	NNC	ENSMUSG00000022816.12	novel	3789	11	NA	NA	54712	-2430	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTAGCGAGGGAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	37651946	37654446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_37651996_37654250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010243	chr16	+	307	1	Genic_Genomic	ENSMUSG00000022816.12	novel	NA	NA	NA	NA	59347	12	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTCCTTATTGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	37656581	37656888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_37656600_37656900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010244	chr16	+	1389	2	ISM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	9898	6494	9898	-6494	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTAAACAGCTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	37698648	37702726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37698927_37701615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010245	chr16	+	1364	1	ISM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	19106	0	19106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTGGTCCGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37707856	37709220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37707900_37709200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010246	chr16	+	2443	3	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	44474	475	44281	-475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGGAAATAGGAAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	37812354	37826916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37812599_37818238_37818398_37824876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010247	chr16	+	2332	2	ISM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	57010	0	56817	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGATCTAAGTGACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	37824890	37827391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37826946_37827114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010248	chr16	+	726	1	ISM	ENSMUSG00000046961.9	ENSMUST00000061274.9	4584	10	88633	1676	57417	2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTTGGCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	37825490	37826216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37825500_37826200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010249	chr16	+	620	2	ISM	ENSMUSG00000022812.15	ENST00000650344.2	1731	10	91	96254	91	-96254	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCATCAAGAAAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	37910511	37964777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_37910976_37964621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010250	chr16	+	498	1	ISM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	156586	0	155299	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTCTTTTATTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	38065948	38066446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38065900_38066400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010251	chr16	-	668	5	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	42068	0	41946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCAGCTGGTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	38073240	38069500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_38069752_38071134_38071241_38071489_38071607_38071755_38071899_38073189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010252	chr16	-	866	4	ISM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	1	4701	1	-4701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGGGCTGACGGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	38115307	38074201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_38074290_38074610_38074745_38086275_38086492_38114879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010253	chr16	+	445	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167345	38173125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_38167567_38169602_38169689_38172987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010254	chr16	+	446	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTGTTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167351	38173126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_38167570_38169602_38169692_38172987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010255	chr16	+	442	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTGTTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167352	38173126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_38167567_38169602_38169692_38172987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010256	chr16	+	448	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167352	38173125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_38167574_38169602_38169692_38172987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010257	chr16	+	434	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTGTTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167353	38173126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_38167560_38169602_38169692_38172987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010258	chr16	+	440	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167353	38173125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_38167570_38169602_38169689_38172987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010259	chr16	+	447	3	NNC	ENSMUSG00000046516.11	novel	444	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38167353	38173125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_38167570_38169602_38169696_38172987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010260	chr16	-	694	3	ISM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	32160	0	16279	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38221347	38216478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_38216898_38217700_38217866_38221237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010261	chr16	-	1415	1	Genic_Genomic	ENSMUSG00000002844.10	novel	NA	NA	NA	NA	7261	2	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGGAGACCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38265804	38264389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_38264400_38265800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010262	chr16	-	2218	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	15	733	15	-733	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAGTAATAATTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	38273050	38265124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010263	chr16	+	1586	2	Antisense	novelGene_ENSMUSG00000002844.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCCCGCAGCCACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38265143	38267873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr16_+_38266469_38267612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010264	chr16	+	1451	2	ISM	ENSMUSG00000075122.6	ENSMUST00000231716.2	3173	7	30743	543	27186	-543	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGAGATGTAATCCACA	NA	NA	NA	NA	NA	NA	NA	NA	38306665	38316154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38306810_38314847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010265	chr16	-	917	3	ISM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	17184	-1	17184	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTGGATCGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	38325841	38318707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_38319446_38322923_38323035_38325773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010266	chr16	-	740	1	Genic_Genomic	ENSMUSG00000002846.10	novel	NA	NA	NA	NA	23578	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTGGATCGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	38319447	38318707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_38318700_38319400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010267	chr16	-	514	1	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	24608	0	24608	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	38346012	38345498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_38345500_38346000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010268	chr16	-	602	3	ISM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	20761	1153	20761	-1153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGAGCAGACCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	38349859	38346651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_38347144_38347938_38347996_38349806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010269	chr16	+	1298	2	NNC	ENSMUSG00000002845.15	novel	2667	9	NA	NA	25412	-37	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGCAGAAGATAAGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	38408585	38412487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_38408670_38411273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010270	chr16	+	1253	1	Genic_Genomic	ENSMUSG00000002845.15	novel	NA	NA	NA	NA	28100	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTATTTGTGAGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	38411273	38412526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_38411300_38412500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010271	chr16	-	4110	1	ISM	ENSMUSG00000022799.5	ENSMUST00000023487.5	7964	12	110825	0	110825	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGGTGTTGAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	38422811	38418701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_38418700_38422800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010272	chr16	+	404	2	ISM	ENSMUSG00000022793.18	ENST00000483209.5	1830	7	97	14711	97	-13949	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATCATCCACCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	38572574	38574497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38572762_38574280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010273	chr16	+	376	2	ISM	ENSMUSG00000022793.18	ENST00000483209.5	1830	7	1848	10978	1848	-10216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGGCCCTGGCTGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	38574325	38578230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38574520_38578048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010274	chr16	+	414	3	ISM	ENSMUSG00000022793.18	ENST00000483209.5	1830	7	5565	2827	-718	-2065	internal_fragment	TRUE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCTGGATTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	38578042	38586381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38578229_38583430_38583554_38586276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010275	chr16	+	405	3	ISM	ENSMUSG00000022793.18	ENSMUST00000114710.8	837	4	2371	171	2301	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAACTTGTTCCAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	38583467	38588473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38583554_38586276_38586382_38588259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010276	chr16	+	368	2	ISM	ENSMUSG00000022793.18	ENST00000483209.5	1830	7	16313	0	7624	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTCTTGGTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38588790	38589208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38589006_38589055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010277	chr16	+	162	1	ISM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	26422	202	7881	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTTGGTCTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38589047	38589209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38589000_38589200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010278	chr16	+	536	1	ISM	ENSMUSG00000022790.15	ENSMUST00000023478.8	3443	7	124308	0	124308	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGTCATTAATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	38846985	38847521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_38847000_38847500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010279	chr16	-	1389	3	NNC	ENSMUSG00000047261.10	novel	1420	3	NA	NA	26	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTGTCTCTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	42160988	42068804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_42069469_42112157_42112730_42160835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010280	chr16	-	1418	3	FSM	ENSMUSG00000047261.10	ENSMUST00000102817.5	1420	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTGTCTCTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	42161012	42068804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_42069478_42112161_42112730_42160835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010281	chr16	+	155	1	FSM	ENSMUSG00000081824.6	ENSMUST00000121906.2	319	1	308	-144	308	144	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATTAGATGTGTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	42776301	42776456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_42776300_42776500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010282	chr16	+	1531	4	ISM	ENSMUSG00000022708.17	ENST00000676079.1	2799	5	51	8608	51	-8608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTCATCACTGTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	43390094	43430818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43390145_43397392_43397557_43397923_43398112_43429689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010283	chr16	+	434	2	NNC	ENSMUSG00000022708.17	novel	2759	5	NA	NA	7990	-9375	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCACTCGCATCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	43398033	43430051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_43398116_43429699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010284	chr16	+	1682	2	ISM	ENSMUSG00000022708.17	ENST00000676079.1	2799	5	40135	175	40135	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCATTTTGTACTACATG	NA	NA	NA	NA	NA	NA	NA	NA	43430178	43439251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43431295_43438685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010285	chr16	+	517	1	ISM	ENSMUSG00000022708.17	ENSMUST00000114694.9	26901	15	710970	23464	48941	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACATACACACACACA	NA	NA	NA	NA	NA	NA	NA	NA	43438984	43439501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43439000_43439500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010286	chr16	+	883	4	ISM	ENSMUSG00000022705.6	ENST00000295881.9	1489	8	3	15347	3	-15347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTGGTTTCAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	43574286	43627860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43574633_43582570_43582875_43610960_43611074_43627740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010287	chr16	+	700	4	ISM	ENSMUSG00000022705.6	ENSMUST00000023390.5	1455	7	44	5770	44	-5682	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCACCCGGCAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	43582627	43637525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43582875_43610960_43611074_43627740_43627884_43637328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010288	chr16	+	717	6	ISM	ENSMUSG00000022705.6	ENST00000295881.9	1489	8	36682	114	28382	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCACGACATGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	43610965	43643093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43611074_43627740_43627884_43637328_43637526_43641645_43641779_43641877_43641926_43643005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010289	chr16	+	180	1	ISM	ENSMUSG00000022705.6	ENST00000383673.5	2266	7	69422	0	61122	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTTAAGTCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	43643705	43643885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43643700_43643900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010290	chr16	-	260	1	ISM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	53644	0	53535	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	43906024	43905764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43905800_43906000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010291	chr16	-	530	3	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	47929	1611	47929	-1611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCAGTGTTTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	43911630	43907618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43907880_43909268_43909441_43911533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010292	chr16	-	417	3	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	40292	3289	40292	-3289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAAACTCTCCTCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	43919267	43909296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43909441_43911533_43911629_43919089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010293	chr16	-	269	2	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	39191	13081	39191	-13081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGGGGCTGCACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	43920368	43919088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43919294_43920304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010294	chr16	-	349	3	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	32151	15920	32151	-15920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGCCAAGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	43927408	43921927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43922043_43922125_43922249_43927297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010295	chr16	-	315	2	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	29550	22080	29550	-22080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGTCTCTAGAGAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	43930009	43928087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43928251_43929857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010296	chr16	-	283	2	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	27974	23847	27974	-23847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTACTGTCTCCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	43931585	43929854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43930010_43931457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010297	chr16	-	334	2	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	27489	25464	27489	-25464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGATGCATCCGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	43932070	43931471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43931596_43931860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010298	chr16	-	353	3	ISM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	22364	25890	22364	-25890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGGGAGTTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	43937195	43931897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43932076_43934976_43935106_43937149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010299	chr16	-	291	2	ISM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	110	31424	1	-31181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACATTTGGTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	43959558	43937188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_43937246_43959324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010300	chr16	+	1709	2	ISM	ENSMUSG00000022698.18	ENSMUST00000063542.8	2136	4	17983	75	17983	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAACAGTACAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	43978237	43981462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43978310_43979825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010301	chr16	+	1857	1	ISM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	21657	0	21618	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAAGTATTTGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	43981872	43983729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_43981900_43983700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010302	chr16	+	1012	3	ISM	ENSMUSG00000068284.15	ENST00000491165.5	2027	7	31802	488	31651	-488	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTTTGGCTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	44025410	44047337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44025444_44033002_44033100_44046455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010303	chr16	+	901	3	NNC	ENSMUSG00000068284.15	novel	2027	7	NA	NA	31731	-585	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTGTGGCTTAAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	44025490	44047240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_44025510_44033002_44033100_44046455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010304	chr16	+	902	1	ISM	ENSMUSG00000068284.15	ENST00000491165.5	2027	7	53315	0	53164	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTCTCTCTCTTCCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	44046923	44047825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44046900_44047800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010305	chr16	+	1359	1	ISM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	40018	0	40018	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCCCCCGTAGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	44207501	44208860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44207500_44208900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010306	chr16	-	754	1	NIC	ENSMUSG00000022687.13	novel	4478	20	NA	NA	35525	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTCACGAGTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	44306165	44305411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_44305400_44306200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010307	chr16	-	1247	4	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	33480	0	33480	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCATCTTAGTCACGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44308210	44305417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010308	chr16	-	958	5	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	24781	6117	24781	-6117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCTGGACCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	44316909	44311534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44311717_44312055_44312263_44312670_44312782_44313175_44313339_44316614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010309	chr16	-	1023	4	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	20683	7774	20683	-7774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACCTTCCGAACAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	44321007	44313191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44313339_44316614_44316923_44319763_44320037_44320712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010310	chr16	-	885	4	ISM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	19536	11333	19536	-11333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCTGCAGAGGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	44322154	44316750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44316923_44319763_44320037_44320712_44321007_44322008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010311	chr16	-	967	4	FSM	ENSMUSG00000022687.13	ENST00000485230.5	962	4	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGCAGTGTGACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	44379202	44340566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_44340867_44341521_44341699_44374488_44374577_44378800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010312	chr16	-	503	3	ISM	ENSMUSG00000022687.13	ENST00000682979.1	4478	20	4630	35207	4621	-50	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGTGCCAGCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	44374578	44340618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44340867_44341521_44341691_44374492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010313	chr16	-	1008	1	ISM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	8588	0	8481	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGTCATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44558138	44557130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44557100_44558100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010314	chr16	-	1635	5	FSM	ENSMUSG00000022668.11	ENST00000383677.7	773	5	1	-863	1	801	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCTATTTTACCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	44566618	44558703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44566361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010315	chr16	+	179	1	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTTTTTATCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	44559982	44560161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr16_+_44560000_44560200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010316	chr16	+	445	2	ISM	ENSMUSG00000022665.16	ENSMUST00000099498.10	4083	9	25	33837	25	-33684	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCAGAAGGTAAAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	44913999	44914603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44914233_44914391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010317	chr16	+	635	2	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	166	32625	166	-32625	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATCCTGGCCAGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44914581	44915662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44914789_44915234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010318	chr16	+	441	2	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	2424	23385	2424	-23385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCAGCATTTTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	44916839	44924902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44917121_44924742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010319	chr16	+	290	2	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	10331	11542	10331	-11542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCGTTTTTCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44924746	44936745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44924900_44936608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010320	chr16	+	396	3	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	22190	4971	22190	-4971	internal_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAAGGCACCTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	44936605	44943316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44936746_44938463_44938613_44943209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010321	chr16	+	580	2	ISM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	32068	263	32068	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTCATGACTTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	44946483	44948024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_44946566_44947526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010322	chr16	+	315	1	Genic_Genomic	ENSMUSG00000022665.16	novel	NA	NA	NA	NA	33711	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGCTTCAGATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	44948126	44948441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_44948100_44948400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010323	chr16	-	929	1	ISM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	18205	0	17682	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTAGCCTTGAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	44960864	44959935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44959900_44960900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010324	chr16	-	1336	2	ISM	ENSMUSG00000022664.12	ENSMUST00000181177.2	865	4	14512	-635	14129	635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGAAAGTCAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44964417	44961673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44962576_44963983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010325	chr16	-	388	3	ISM	ENSMUSG00000022664.12	ENST00000492406.6	1414	7	6909	2078	6595	-28	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATCGAAGGAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	44971951	44964580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44964765_44967630_44967699_44971815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010326	chr16	-	301	3	ISM	ENSMUSG00000022664.12	ENST00000492406.6	1414	7	5820	5127	5506	-3077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAATTCAGAATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44973040	44967629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44967699_44971815_44971947_44972939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010327	chr16	-	283	3	ISM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	6029	7715	5506	-3098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCAGGATAGTGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	44973040	44967650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44967699_44971815_44971950_44972939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010328	chr16	-	361	3	ISM	ENSMUSG00000022664.12	ENST00000492406.6	1414	7	0	10437	0	-8387	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGCTAATATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44978860	44972939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_44973039_44977823_44977970_44978744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010329	chr16	+	1079	3	ISM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	24895	-1	24895	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACATATGCCACATATAT	NA	NA	NA	NA	NA	NA	NA	NA	45004042	45008902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_45004173_45006528_45006598_45008022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010330	chr16	+	880	1	Genic_Genomic	ENSMUSG00000022663.4	novel	NA	NA	NA	NA	28875	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACATATGCCACATATAT	NA	NA	NA	NA	NA	NA	NA	NA	45008022	45008902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_45008000_45008900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010331	chr16	-	2003	4	ISM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	11826	-4	11648	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTTTTTTTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	45217590	45202493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010332	chr16	-	1327	1	Genic_Genomic	ENSMUSG00000022661.15	novel	NA	NA	NA	NA	25416	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTTTTTTTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	45203822	45202495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_45202500_45203800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010333	chr16	-	212	1	NIC	ENSMUSG00000033177.14	novel	2587	18	NA	NA	29856	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGATAGATCCTTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45476948	45476736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_45476700_45476900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010334	chr16	-	345	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	28258	-1	28258	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGATAGATCCTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45478546	45476737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45476942_45478405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010335	chr16	-	289	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	25647	1670	25647	-1670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGTCTTCCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	45481157	45478408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45478543_45481002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010336	chr16	-	357	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	24115	4349	24115	-4349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGCATTCCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	45482689	45481087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45481272_45482516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010337	chr16	-	281	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	23056	5786	23056	-5786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACAGGTAGACCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	45483748	45482524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45482689_45483631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010338	chr16	-	230	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	22158	6892	22158	-6892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTAGAAATGGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	45484646	45483630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45483749_45484534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010339	chr16	-	248	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	16849	11176	16849	-11176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGTAATACAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	45489955	45487914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45488023_45489815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010340	chr16	-	357	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	8475	13077	8475	-13077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGGGATCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45498329	45489815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45489953_45494235_45494343_45498216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010341	chr16	-	302	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	7046	17549	7046	-17549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAGTGCAAAAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	45499758	45494287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45494343_45498216_45498330_45499624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010342	chr16	-	346	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	5729	21569	5729	-21569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAAATCAACAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45501075	45498307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45498330_45499624_45499756_45500882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010343	chr16	-	364	2	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	2839	24203	2839	-24203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGACTCCCTGACTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45503965	45500941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45501112_45503771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010344	chr16	-	348	3	ISM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	16	27059	16	-27059	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATGGACTCTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	45506788	45503797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45503963_45504933_45505002_45506673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010345	chr16	-	230	1	ISM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	13001	0	10550	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGGTGAGTCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45550317	45550087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45550100_45550300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010346	chr16	-	268	2	ISM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	6013	2017	3562	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCCAGATGTAGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	45557305	45552104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45552323_45557255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010347	chr16	-	658	4	FSM	ENSMUSG00000033157.18	ENST00000494817.1	656	4	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAATAGTTCCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	45560866	45552155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_45552379_45557255_45557394_45557886_45557999_45560681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010348	chr16	-	269	2	ISM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	9	10679	9	-8608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGCTATCTTTCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	45563309	45560766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45560866_45563139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010349	chr16	-	1706	1	Genic_Genomic	ENSMUSG00000033149.18	novel	NA	NA	NA	NA	62433	2	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCCTCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	45568296	45566590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_45566600_45568300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010350	chr16	-	1801	2	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	61541	0	61541	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTCTCCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	45569188	45566592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45568295_45569089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010351	chr16	-	2011	3	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	58798	0	58798	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTCTCCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	45571931	45566592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45568295_45569089_45569176_45571708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010352	chr16	-	452	3	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	53120	2499	53120	-2335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGTATCAATTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	45577609	45569091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45569176_45571708_45571929_45577461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010353	chr16	-	446	3	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	47250	10868	47250	-10704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCTATCAGAGTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	45583479	45577460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45577609_45578479_45578571_45583272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010354	chr16	-	448	3	ISM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	53816	16680	38089	-16516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACTCGGTGAAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	45592640	45583272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45583478_45591034_45591135_45592497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010355	chr16	-	340	3	ISM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	51035	24458	35308	-24294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGGATGCTCAGAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	45595421	45591050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45591135_45592497_45592639_45595306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010356	chr16	-	353	3	ISM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	48310	25908	32583	-25744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAGGACTCAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	45598146	45592500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45592639_45595306_45595451_45598075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010357	chr16	-	337	3	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	28907	31505	28907	-31341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCCCAATACTCTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	45601822	45598097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45598166_45600618_45600730_45601664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010358	chr16	-	590	3	ISM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	1855	55340	1855	-55176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAAGGAGATTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	45628874	45621932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45621993_45623058_45623203_45628488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010359	chr16	-	2044	4	ISM	ENSMUSG00000033149.18	ENST00000412622.5	5487	17	6	56572	6	-56408	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCTGCAATGGAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	45665186	45623164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_45623203_45628488_45628873_45645121_45646459_45664901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010360	chr16	+	470	2	FSM	ENSMUSG00000085781.2	ENSMUST00000152070.2	527	2	57	0	57	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAGAGACCTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	45756742	45759642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_45756792_45759221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010361	chr16	+	424	1	NIC	ENSMUSG00000085781.2	novel	527	2	NA	NA	2533	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAGAGACCTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	45759218	45759642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_45759200_45759600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010362	chr16	-	1071	1	FSM	ENSMUSG00000048087.7	ENSMUST00000059524.7	2093	1	1059	-37	1059	37	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCTCGAAGGCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	45974381	45973310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_45973300_45974400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010363	chr16	+	205	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	-1	112113	-1	-112113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTAATTATCTAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	48251719	48266745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48251766_48257637_48257705_48266653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010364	chr16	+	250	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	5917	109102	5917	-109102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATTGTTTTTCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	48257637	48269756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48257705_48266653_48266745_48269664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010365	chr16	+	293	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	14933	108385	14933	-108385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATGGGGCTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48266653	48270473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48266745_48269664_48269756_48270362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010366	chr16	+	362	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	17943	105903	17943	-105903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTTATCAGAAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	48269663	48272955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48269756_48270362_48270472_48272794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010367	chr16	+	194	2	NNC	ENSMUSG00000022652.8	novel	1437	14	NA	NA	18701	-105913	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGTGGTAAGGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	48270421	48272945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_48270472_48272801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010368	chr16	+	398	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	21068	78542	21068	-78542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATGTTTCCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	48272788	48300316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48272955_48281042_48281149_48300190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010369	chr16	+	204	2	NNC	ENSMUSG00000022652.8	novel	1437	14	NA	NA	21133	-97710	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACTAGTGTATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	48272853	48281148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_48272952_48281042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010370	chr16	+	309	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	29326	59668	29326	-59668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGTTTCTATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	48281046	48319190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48281149_48300190_48300317_48319109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010371	chr16	+	343	4	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	48470	56125	48470	-56125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGCTGCGGCTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	48300190	48322733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48300317_48319109_48319190_48320456_48320528_48322667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010372	chr16	+	168	2	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	67384	58319	67384	-58319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATCATCTTCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	48319104	48320539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48319190_48320456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010373	chr16	+	281	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	68735	48155	68735	-48155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGTTCATTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	48320455	48330703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48320528_48322667_48322733_48330559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010374	chr16	+	376	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	70937	43753	70937	-43753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTCTGTGGTCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	48322657	48335105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48322733_48330559_48330704_48334948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010375	chr16	+	343	3	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	78922	0	78922	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGAGTGCTGCGTGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	48330642	48378858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_48330704_48334948_48335104_48378731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010376	chr16	+	130	1	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	127010	2	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTGCGTGCCAATC	NA	NA	NA	NA	NA	NA	NA	NA	48378730	48378860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_48378700_48378900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010377	chr16	+	215	2	ISM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	177	63198	106	-62189	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAACTGGCCGTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	49519772	49522291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49519913_49522216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010378	chr16	+	180	2	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	2583	60918	2583	-60918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGTGCTATGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	49522249	49523562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49522380_49523512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010379	chr16	+	187	2	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	3853	57952	3853	-57952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAAGAATTTGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	49523519	49526528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49523632_49526453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010380	chr16	+	163	2	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	6785	52209	6785	-52209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTCATTGGCTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	49526451	49532271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49526545_49532201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010381	chr16	+	194	2	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	12534	27322	12534	-27322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACCGAGAGAGCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	49532200	49557158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49532271_49557034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010382	chr16	+	285	3	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	37394	4685	37394	-4685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCAGCTAAGTGAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	49557060	49579795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49557158_49578757_49578830_49579679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010383	chr16	+	200	2	ISM	ENSMUSG00000032965.12	ENSMUST00000142682.9	1582	11	60011	3098	60011	-3098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATCAGCTCTCAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	49579677	49581382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49579812_49581316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010384	chr16	+	181	1	ISM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	65713	0	65642	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACCTTTCTTCCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	49585308	49585489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49585300_49585500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010385	chr16	+	4517	6	ISM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	38576	0	27388	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGGTTATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	49714583	49735373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010386	chr16	-	286	1	Genic_Genomic	ENSMUSG00000022641.16	novel	NA	NA	NA	NA	138865	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAAATACATTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	50012491	50012205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_50012200_50012500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010387	chr16	-	363	1	ISM	ENSMUSG00000022641.16	ENSMUST00000138166.8	8743	17	234868	5316	133471	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGACGCACTGCACTAG	NA	NA	NA	NA	NA	NA	NA	NA	50017885	50017522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50017500_50017900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010388	chr16	-	546	2	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	130401	127	130401	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCAGTGGTGACTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	50020955	50017648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50018010_50020770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010389	chr16	-	419	3	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	121847	3274	121847	-3274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGGCCATGGAGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	50029509	50020795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50020955_50022740_50022939_50029447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010390	chr16	-	345	3	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	107606	11928	107606	-11928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAAAAGCAACATATATT	NA	NA	NA	NA	NA	NA	NA	NA	50043750	50029449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50029508_50040807_50040957_50043612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010391	chr16	-	589	3	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	106403	23285	106403	-23285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGTGGCCTCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	50044953	50040806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50040957_50043612_50043749_50044650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010392	chr16	-	393	2	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	90060	27822	90060	-27822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTTACTCTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	50061296	50045343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50045657_50061216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010393	chr16	-	279	3	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	64684	54158	64684	-54158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAATGTTTGCATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	50086672	50071679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50071758_50082778_50082847_50086539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010394	chr16	-	436	2	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	56204	69018	56204	-69018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTTACACAGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	50095152	50086539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50086733_50094909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010395	chr16	-	674	3	ISM	ENSMUSG00000022641.16	ENSMUST00000114488.8	3293	15	-111	77399	-111	-77399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAAGGAGGTAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	50151467	50094920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50095153_50100731_50100903_50151196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010396	chr16	-	523	2	ISM	ENSMUSG00000022641.16	ENST00000406780.5	3669	16	15	133673	15	-133673	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAAACCTTCTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	50184635	50151194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50151466_50184383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010397	chr16	-	859	1	ISM	ENSMUSG00000022639.15	ENSMUST00000186944.7	2052	4	12621	0	12531	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAGTGAGTGACTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	50540515	50539656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_50539700_50540500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010398	chr16	-	719	1	Genic_Genomic	ENSMUSG00000022639.15	novel	NA	NA	NA	NA	6342	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGAGTAGTACTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	50546704	50545985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_50546000_50546700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010399	chr16	-	2452	5	FSM	ENSMUSG00000075033.5	ENST00000491511.6	2471	5	19	0	19	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACTCTCAGAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55715334	55663701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158_55686914_55715306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010400	chr16	+	498	4	ISM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	-1	1780	-1	-1780	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTACGGTCAGCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	55786636	55790018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010401	chr16	+	389	4	ISM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	273	1258	273	-1258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGGGGATGTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	55786910	55790540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_55786986_55787422_55787534_55789872_55790010_55790474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010402	chr16	+	439	4	ISM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	783	0	783	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55787420	55791798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_55787534_55789872_55790010_55790474_55790539_55791673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010403	chr16	-	463	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	887	0	887	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTTTCCTTGTAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	55794093	55793630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_55793600_55794100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010404	chr16	-	2292	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	6	-3	6	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTATTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55850096	55835865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010405	chr16	-	1815	1	NIC	ENSMUSG00000071533.12	novel	901	5	NA	NA	7308	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55837683	55835868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_55835900_55837700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010406	chr16	-	2004	4	NNC	ENSMUSG00000071533.12	novel	2295	5	NA	NA	341	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTCTTATTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55844650	55835869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_55837681_55838834_55838891_55842417_55842493_55844588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010407	chr16	-	136	2	FSM	ENSMUSG00000071533.12	ENST00000627393.1	135	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGCAGTGAAGAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	55850043	55844942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_55845001_55849965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010408	chr16	-	209	1	Genic_Genomic	ENSMUSG00000044763.9	novel	NA	NA	NA	NA	5003	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATATTTTTACTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55853179	55852970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_55853000_55853200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010409	chr16	-	353	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	142	2507	142	-2507	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCTGAGCAGCTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	55858040	55855478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_55855655_55857863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010410	chr16	+	648	2	ISM	ENSMUSG00000035270.16	ENST00000193391.8	3619	15	52813	9382	52813	-9382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCATTAGAGAAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	56078265	56080071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_56078577_56079734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010411	chr16	-	789	1	Genic_Genomic	ENSMUSG00000022757.20	novel	NA	NA	NA	NA	21711	1	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTGTTGCCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	56511482	56510693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_56510700_56511500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010412	chr16	-	1407	6	ISM	ENSMUSG00000022757.20	ENST00000675543.1	1709	8	8256	-1	8256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56524937	56510694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517821_56517960_56521431_56521600_56524789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010413	chr16	-	1939	8	FSM	ENSMUSG00000022757.20	ENST00000674758.1	1972	8	34	-1	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56537727	56510694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533282_56537533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010414	chr16	-	1680	7	ISM	ENSMUSG00000022757.20	ENST00000674615.1	2004	8	4577	-1	-11	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56533204	56510694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010415	chr16	-	1177	4	ISM	ENSMUSG00000022757.20	ENST00000418917.7	1663	7	11630	-1	11630	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56521563	56510694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56511517_56514762_56514848_56517821_56517960_56521431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010416	chr16	-	1061	4	ISM	ENSMUSG00000022757.20	ENST00000675692.1	1967	9	19851	14	15244	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTGAATCCAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	56517949	56510709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56511517_56512238_56512280_56514762_56514848_56517821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010417	chr16	-	1060	4	NIC	ENSMUSG00000022757.20	novel	1656	7	NA	NA	11593	-142	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCTAGGCTAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	56521600	56510837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_56511513_56514762_56514853_56517833_56517960_56521431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010418	chr16	-	758	3	NNC	ENSMUSG00000022757.20	novel	1663	7	NA	NA	15231	-277	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACAGACACAAAAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	56517962	56510972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_56511517_56514762_56514836_56517821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010419	chr16	-	751	4	ISM	ENSMUSG00000022757.20	ENST00000675890.1	1914	8	16200	450	11593	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATCGATAAGGAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	56521600	56511145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56511517_56514762_56514848_56517833_56517960_56521431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010420	chr16	-	531	4	ISM	ENSMUSG00000022757.20	ENST00000676111.1	1697	8	15300	481	15300	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCAGGGGTATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	56517893	56511176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010421	chr16	-	659	1	Genic_Genomic	ENSMUSG00000022754.7	novel	NA	NA	NA	NA	80349	2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGTTGTGCTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	56626180	56625521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_56625500_56626200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010422	chr16	-	804	2	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	74491	962	74491	-962	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTCAAAAAGTAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	56632038	56626485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56627140_56631888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010423	chr16	-	698	3	ISM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	56	18227	56	-18227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGTATGAAGAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	56706473	56643750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56643958_56646028_56646222_56706175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010424	chr16	+	873	2	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	28116	3374	28116	-3374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGTACAGGAAGACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	56970181	56973694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_56970306_56972945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010425	chr16	+	774	1	ISM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	34229	0	34229	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGATGGGATATTAG	NA	NA	NA	NA	NA	NA	NA	NA	56976294	56977068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_56976300_56977100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010426	chr16	-	216	3	ISM	ENSMUSG00000022751.10	ENST00000265259.5	665	8	4803	-1	4278	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGAAGCCTTGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	56979879	56977452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56977530_56977846_56977883_56979776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010427	chr16	-	210	3	ISM	ENSMUSG00000022751.10	ENST00000265259.5	665	8	4173	393	3648	-393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTTTGCCCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	56980509	56977846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56977883_56979776_56979880_56980438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010428	chr16	-	185	2	ISM	ENSMUSG00000022751.10	ENSMUST00000231733.2	1181	7	3646	2748	3646	-2323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTTAGGCTGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	56980511	56979776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56979880_56980429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010429	chr16	-	340	4	ISM	ENSMUSG00000022751.10	ENSMUST00000231733.2	1181	7	178	3408	178	-2983	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCCGGTAAGAAAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	56983979	56980436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56980509_56981492_56981568_56982053_56982148_56983880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010430	chr16	-	208	2	ISM	ENSMUSG00000022751.10	ENST00000265259.5	665	8	3	6427	3	-6427	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGTGCCGATCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	56984679	56983880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56983970_56984560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010431	chr16	-	735	1	ISM	ENSMUSG00000022749.9	ENST00000344949.9	3577	18	61791	0	48835	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCTGGAGGATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	56989956	56989221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56989200_56990000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010432	chr16	-	1104	4	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	40407	-581	40407	-411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACTAATTGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	56998384	56990120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010433	chr16	-	133	2	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	36891	7595	36891	-7595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTGAGTAGTAATACACG	NA	NA	NA	NA	NA	NA	NA	NA	57001900	56998296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_56998384_57001854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010434	chr16	-	283	3	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	31746	12521	31746	-12521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGACCGGTGAGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57007045	57003222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57003354_57004742_57004850_57007000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010435	chr16	-	295	3	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	26861	16312	26861	-16312	internal_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGATTTATGGGTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	57011930	57007013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57007044_57009624_57009796_57011836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010436	chr16	-	304	3	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	25725	18978	25725	-18978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAGAGAGGAAGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	57013066	57009679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57009796_57011836_57011930_57012971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010437	chr16	-	214	2	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	20044	22283	20044	-22283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTGCAAGGGGTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	57018747	57012984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57013095_57018643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010438	chr16	-	139	2	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	19660	27956	19660	-27956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTTTAGGAAGGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57019131	57018657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57018748_57019082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010439	chr16	-	171	2	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	19444	28387	19444	-28387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGTAAGTAGTATCAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	57019347	57019088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57019134_57019221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010440	chr16	-	206	2	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	10105	28559	10105	-28559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTCTTAATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	57028686	57019260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57019347_57028566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010441	chr16	-	161	2	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	18875	38941	5937	-37949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCATCCAGTACCACGA	NA	NA	NA	NA	NA	NA	NA	NA	57032854	57028650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57028691_57032733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010442	chr16	-	209	2	ISM	ENSMUSG00000022749.9	ENSMUST00000226586.2	3112	19	17095	43128	4157	-42136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGCTGGATTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	57034634	57032837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57032939_57034526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010443	chr16	-	147	2	ISM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	77	43827	77	-43827	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTAAGTTTGATAACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	57038714	57034528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57034633_57038671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010444	chr16	-	525	2	FSM	ENSMUSG00000022748.9	ENSMUST00000232413.2	529	2	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTATGTTTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57427223	57381795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_57382126_57427028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010445	chr16	-	333	1	NIC	ENSMUSG00000022748.9	novel	529	2	NA	NA	45081	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTATGTTTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57382128	57381795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_57381800_57382100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010446	chr16	-	740	1	ISM	ENSMUSG00000068196.6	ENSMUST00000089332.5	5108	4	127530	2210	5434	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGTTTTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57447570	57446830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57446800_57447600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010447	chr16	-	935	2	ISM	ENSMUSG00000068196.6	ENSMUST00000089332.5	5108	4	122147	3905	51	-1695	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTCCGGGTGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	57452953	57448525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_57449181_57452673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010448	chr16	-	798	2	FSM	ENSMUSG00000068196.6	ENST00000273342.8	2678	2	104	1776	104	-1776	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTGTGCCAGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	57452900	57448606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_57449178_57452673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010449	chr16	+	2049	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	79	19	29	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTAGAGTGTCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	58548351	58554595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010450	chr16	+	427	4	FSM	ENSMUSG00000022744.13	ENST00000511081.5	647	4	0	220	0	-220	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCTCCCTTACAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58548390	58553322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_58548448_58551664_58551776_58552943_58553082_58553201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010451	chr16	-	482	2	Antisense	novelGene_ENSMUSG00000022744.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGGTTAAAAGAGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	58553542	58552943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr16_-_58553097_58553213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010452	chr16	-	373	2	Antisense	novelGene_ENSMUSG00000022744.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCCAATCAACGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	58553515	58553018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr16_-_58553088_58553211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010453	chr16	+	1426	1	NIC	ENSMUSG00000022744.13	novel	2147	5	NA	NA	4798	0	mono-exon	FALSE	NA	NA	NA	NA	NA	673	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGAGATCACAACATG	NA	NA	NA	NA	NA	NA	NA	NA	58553188	58554614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_58553200_58554600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010454	chr16	+	251	2	FSM	ENSMUSG00000022724.16	ENSMUST00000120667.2	2200	2	-29	1978	0	-1978	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAAGCGGGTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	59292137	59295952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_59292309_59295872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010455	chr16	+	293	2	ISM	ENSMUSG00000022724.16	ENSMUST00000120674.8	1753	9	3977	12377	3731	1724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGAACTTCGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	59296161	59299654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_59296333_59299532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010456	chr16	+	299	3	ISM	ENSMUSG00000022724.16	ENSMUST00000120674.8	1753	9	7402	8560	7156	5541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTTTCTTCCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	59299586	59303471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_59299653_59300653_59300783_59303367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010457	chr16	+	209	2	ISM	ENSMUSG00000022724.16	ENSMUST00000120674.8	1753	9	11181	5033	10935	-5033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGTAGAAGCAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	59303365	59306998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_59303472_59306895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010458	chr16	+	259	2	ISM	ENSMUSG00000022724.16	ENSMUST00000120674.8	1753	9	14711	4085	14465	-4085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGATGGACCCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	59306895	59307946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_59306999_59307790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010459	chr16	+	241	1	ISM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	20446	0	20153	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGCCGGTATATACATG	NA	NA	NA	NA	NA	NA	NA	NA	59312583	59312824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_59312600_59312800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010460	chr16	-	518	1	ISM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	25323	378	18676	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAACTAGAGTGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	59434207	59433689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_59433700_59434200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010461	chr16	-	186	2	ISM	ENSMUSG00000022722.19	ENST00000394206.5	827	6	16140	-1	9445	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATGTATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59443438	59441580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_59441712_59443383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010462	chr16	+	1854	1	FSM	ENSMUSG00000085783.4	ENSMUST00000122292.2	1414	1	-53	-387	-53	387	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGGACAGAGCCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	62537346	62539200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_62537300_62539200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010463	chr16	-	237	1	ISM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	53119	0	52858	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTATCTAATTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62614284	62614047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_62614000_62614300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010464	chr16	+	336	2	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	0	43808	0	-42701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATAATCCCGAGACG	NA	NA	NA	NA	NA	NA	NA	NA	62674669	62705901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_62674868_62705763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010465	chr16	+	312	3	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	14906	24693	14906	-24693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCAGGAGACTTCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	62720686	62723909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_62720812_62720915_62721048_62723854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010466	chr16	+	337	3	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	22242	14345	22242	-14345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGATGGGAAGATTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62728022	62734257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_62728147_62730360_62730477_62734160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010467	chr16	+	471	3	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	24583	9997	24583	-9997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTGTGTCGTTTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	62730363	62738605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_62730477_62734160_62734351_62738437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010468	chr16	+	455	3	ISM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	32656	3607	32656	-3607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGGATTCTCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	62738436	62744995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_62738606_62739875_62740045_62744878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010469	chr16	+	353	2	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	72166	1042	41055	65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCCTTCAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	62746835	62748667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_62746917_62748395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010470	chr16	+	254	1	ISM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	74786	0	43675	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCAATTTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	62749455	62749709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_62749500_62749700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010471	chr16	-	1078	3	ISM	ENSMUSG00000052504.8	ENSMUST00000232654.2	2338	7	90602	41963	90525	-41963	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTGAGCTCGCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	63593918	63472637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_63472914_63473785_63473942_63593272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010472	chr16	-	412	2	ISM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	2150	4534	2150	-4534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAGTTGCAGGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	64589374	64587032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_64587357_64589286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010473	chr16	+	1958	2	ISM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	960	2069	960	-2059	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAGAAAATAATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64673318	64677801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_64673389_64675913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010474	chr16	+	1282	2	FSM	ENSMUSG00000054604.8	ENST00000398392.2	3872	2	1339	1251	1339	-1251	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTCCGTCCCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	64677173	64678609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_64677819_64677972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010475	chr16	+	1937	1	ISM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	5575	0	2099	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTTGTTTTGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	64677933	64679870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_64677900_64679900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010476	chr16	+	383	3	ISM	ENSMUSG00000004842.19	ENST00000560656.1	647	4	16	4064	16	-4064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTGCCAACGAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	65317530	65326800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_65317657_65320448_65320521_65326615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010477	chr16	+	387	2	ISM	ENSMUSG00000004842.19	ENST00000560656.1	647	4	9147	0	6499	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTGGCGTGTGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	65326661	65330864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_65326841_65330656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010478	chr16	-	229	1	ISM	ENSMUSG00000004843.8	ENSMUST00000231259.2	1722	7	23164	0	23164	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCCTAACGCGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	65336242	65336013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_65336000_65336200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010479	chr16	-	651	1	ISM	ENSMUSG00000004843.8	ENSMUST00000231259.2	1722	7	22401	341	22401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGACTGAGAACAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	65337005	65336354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_65336400_65337000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010480	chr16	-	821	3	ISM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	17371	175	17137	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCCTGAGCTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	65342269	65336529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_65337137_65337305_65337413_65342162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010481	chr16	-	375	3	ISM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	15710	982	15476	-982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGAAATTGGGATTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	65343930	65337336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_65337413_65342162_65342266_65343734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010482	chr16	-	252	2	ISM	ENSMUSG00000004843.8	ENSMUST00000231259.2	1722	7	11465	7757	11465	-7416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGATGGCCGGTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	65347941	65343770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_65343930_65347848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010483	chr16	-	241	2	ISM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	104	11834	-102	-11493	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGAACGTCGGTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	65359508	65347847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_65347941_65359360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010484	chr16	+	1712	4	FSM	ENSMUSG00000091243.3	ENST00000398399.7	1982	4	270	0	-30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTATATATGTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	65612484	65658296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_65612645_65624776_65625063_65636094_65636620_65657555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010485	chr16	+	253	2	ISM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	349856	21830	349856	-21830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGCCAAAATGCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	72809892	72821153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_72810012_72821019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010486	chr16	-	910	1	ISM	ENSMUSG00000052516.20	ENSMUST00000117785.9	8591	28	515311	2930	151254	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCTTGAATATGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	73692566	73691656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_73691700_73692600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010487	chr16	+	404	4	ISM	ENSMUSG00000032940.17	ENST00000400577.4	834	5	25	2039	25	-2039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAATGGTGAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	75389850	75395749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_75389932_75393401_75393565_75395057_75395131_75395662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010488	chr16	+	498	3	ISM	ENSMUSG00000032940.17	ENST00000400577.4	834	5	5258	41	5258	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAAGTGCCGCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75395083	75397747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_75395131_75395662_75395760_75397393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010489	chr16	+	391	1	NIC	ENSMUSG00000032940.17	novel	1400	6	NA	NA	7576	4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCTGCACTGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75397401	75397792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_75397400_75397800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010490	chr16	-	161	1	Genic_Genomic	ENSMUSG00000032932.16	novel	NA	NA	NA	NA	11622	13	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGAGGGGGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	75552057	75551896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_75551900_75552100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010491	chr16	-	1215	6	ISM	ENSMUSG00000022876.19	ENST00000285670.7	1286	7	4789	-5	4789	5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGATGCAAGCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	75680911	75656103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_75656528_75667655_75667807_75670333_75670541_75673313_75673466_75675984_75676115_75680760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010492	chr16	-	590	1	ISM	ENSMUSG00000048490.15	ENSMUST00000121927.8	7868	4	85502	336	84724	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTGAAATGGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	76085213	76084623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_76084600_76085200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010493	chr16	-	777	3	FSM	ENSMUSG00000048490.15	ENST00000400202.5	7651	3	144	6730	144	-3605	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTACCCAGACGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	76169793	76091354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_76091904_76127633_76127753_76169684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010494	chr16	+	722	3	FSM	ENSMUSG00000090386.11	ENST00000653809.1	721	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGCTGAGGATGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	77033154	77036062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_77033224_77033852_77034139_77035695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010495	chr16	+	293	2	FSM	ENSMUSG00000090386.11	ENST00000666517.1	316	2	0	23	0	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCCAATCAGTGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	77033174	77034115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_77033205_77033852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010496	chr16	+	264	1	NIC	ENSMUSG00000090386.11	novel	721	3	NA	NA	676	8	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTACATCATGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	77033882	77034146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_+_77033900_77034100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010497	chr16	+	281	2	ISM	ENSMUSG00000022865.15	ENST00000400165.5	561	3	22	7287	22	-880	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACTTACCAGTGCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78122065	78125976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_78122212_78125841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010498	chr16	+	394	2	ISM	ENSMUSG00000022865.15	ENST00000400165.5	561	3	3797	0	3797	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCTAATCTCAGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	78125840	78133263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_78126047_78133075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010499	chr16	+	227	2	ISM	ENSMUSG00000022865.15	ENST00000400166.5	877	4	3874	3076	3874	-2916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTGAATGGCAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	78125917	78130347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_78126047_78130249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010500	chr16	+	242	2	ISM	ENSMUSG00000022865.15	ENST00000400166.5	877	4	8241	227	8241	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAGTCCCCAGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	78130284	78133196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_78130406_78133075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010501	chr16	+	144	1	ISM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	34899	4222	11239	3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCCCATATATATAATAT	NA	NA	NA	NA	NA	NA	NA	NA	78133282	78133426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_78133300_78133400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010502	chr16	-	257	2	ISM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	0	13517	0	-13517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGTTCGAAAGCATGACA	NA	NA	NA	NA	NA	NA	NA	NA	78173698	78170264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78170312_78173488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010503	chr16	-	582	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	125695	0	125695	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGACCCAAACATAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	78759085	78750681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78750844_78754197_78754338_78757427_78757524_78758901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010504	chr16	-	575	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	119768	3546	119768	-3546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAGAAGGAGGAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	78765012	78754227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78754338_78757427_78757524_78758901_78759084_78764825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010505	chr16	-	516	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	115616	8220	115616	-8220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGGACTCCGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78769164	78758901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78759084_78764825_78765013_78765154_78765205_78769067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010506	chr16	-	441	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	86055	18386	86055	-18386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGCCAGGATGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	78798725	78769067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78769164_78782762_78782896_78784531_78784643_78798624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010507	chr16	-	462	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	84458	32115	84458	-32115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAATGAAGTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78800322	78782796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78782896_78784531_78784643_78798624_78798766_78800211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010508	chr16	-	451	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	81690	33850	81690	-33850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTGATTTTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	78803090	78784531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78784643_78798624_78798766_78800211_78800338_78803017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010509	chr16	-	456	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	66373	47977	66373	-47977	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCACTTCCGGCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	78818407	78798658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78798766_78800211_78800338_78803017_78803108_78818274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010510	chr16	-	472	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	63484	49530	63484	-49530	internal_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACTGAAATTTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	78821296	78800211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78800338_78803017_78803108_78818274_78818411_78821176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010511	chr16	-	467	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	63051	52334	63051	-52334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTTTCTTTCGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	78821729	78803015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78803108_78818274_78818411_78821176_78821328_78821641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010512	chr16	-	431	4	ISM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	30172	80488	30172	-80488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGAAAGAATCCAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	78854608	78831169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_78831243_78831998_78832140_78850921_78851029_78854498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010513	chr16	-	272	1	Genic_Genomic	ENSMUSG00000022889.8	novel	NA	NA	NA	NA	17897	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTAGGCCCGGCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	84514733	84514461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_84514500_84514700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010514	chr16	-	460	3	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	11748	554	11748	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCAGATGGGCGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	84520882	84515017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84515273_84517157_84517206_84520725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010515	chr16	-	295	3	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	8151	6295	8151	-6295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGGCCTGTCTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	84524479	84520758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84520880_84522012_84522079_84524371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010516	chr16	-	306	3	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	3264	12842	3264	-12842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGCTCTCCGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	84529366	84527305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84527375_84527715_84527816_84529229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010517	chr16	-	432	3	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	1129	13267	1129	-13267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGAAGTTCCTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	84531501	84527730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84527816_84529229_84529370_84531294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010518	chr16	-	293	2	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	1194	14755	1194	-14755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCCATTTTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84531436	84529218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84529370_84531294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010519	chr16	-	440	2	ISM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	357	16830	357	-16830	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAGCAGAACAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	84532273	84531293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84531502_84532041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010520	chr16	+	288	1	ISM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	36323	0	17151	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTCTTCAGAATAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	84607596	84607884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_84607600_84607900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010521	chr16	+	3029	3	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	22719	-266	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTGTGAGTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	84613164	84622550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_84613275_84618147_84618191_84619674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010522	chr16	+	2924	1	Genic_Genomic	ENSMUSG00000053062.17	novel	NA	NA	NA	NA	29449	2	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTATGGTCTATGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	84619894	84622818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_84619900_84622800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010523	chr16	-	829	5	FSM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	0	-20	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAGAGGCAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	84632513	84624738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696_84631872_84632308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010524	chr16	-	658	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	521	0	521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	84631870	84624758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010525	chr16	-	736	3	NNC	ENSMUSG00000022890.14	novel	1115	4	NA	NA	125	-554	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTGTCGCAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	84632266	84625312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_84625438_84628216_84628391_84631829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010526	chr16	-	499	3	NNC	ENSMUSG00000022890.14	novel	1115	4	NA	NA	266	-642	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAGATCTGGACAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	84632125	84625400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_84625438_84628216_84628383_84631829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010527	chr16	+	1456	1	ISM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	27200	0	27200	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84659211	84660667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_84659200_84660700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010528	chr16	-	783	1	ISM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	218546	4753	218380	2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTTTCTTTGAAGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84752108	84751325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84751300_84752100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010529	chr16	-	971	3	ISM	ENSMUSG00000022892.12	ENSMUST00000226232.2	3120	17	207990	41	207855	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAACATTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	84762633	84751572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_84752321_84759609_84759757_84762557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010530	chr16	+	811	1	Genic_Genomic	ENSMUSG00000044442.12	novel	NA	NA	NA	NA	13689	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGCCTTTGTGTAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	87164821	87165632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_87164800_87165600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010531	chr16	-	1631	3	ISM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	3462	0	3462	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTGTTATCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87233999	87230294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87231515_87233460_87233824_87233951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010532	chr16	+	384	2	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	-158	24568	118	-24568	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGTTCCTCAGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	87251708	87255630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_87251991_87255528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010533	chr16	+	440	2	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	21733	3921	21733	-3921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCTAACACCGAGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	87273599	87276277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_87273776_87276013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010534	chr16	+	475	3	ISM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	24507	1521	24507	-1521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATGTAAGGTAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	87276373	87278677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_87276678_87277762_87277858_87278601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010535	chr16	+	388	2	ISM	ENSMUSG00000025616.15	ENST00000399975.7	2930	18	27894	171	27877	23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAATCATGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	87279743	87280221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_87279905_87279994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010536	chr16	+	320	1	ISM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	28495	0	28219	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTAGAGTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	87280085	87280405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_87280100_87280400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010537	chr16	-	395	1	Genic_Genomic	ENSMUSG00000025613.14	novel	NA	NA	NA	NA	12069	1	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGTGAACATAATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	87280607	87280212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_87280200_87280600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010538	chr16	-	711	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	9881	-274	9881	274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGCAAACAAAAAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	87282795	87280601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010539	chr16	-	435	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	9435	856	9435	-856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACTAATGCTGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	87283241	87281731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87281812_87282467_87282633_87282721_87282794_87283123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010540	chr16	-	360	3	NNC	ENSMUSG00000025613.14	novel	1470	14	NA	NA	9436	-1590	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGATTTGACTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	87283240	87282465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_87282633_87282721_87282794_87283119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010541	chr16	-	443	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	9267	1591	9267	-1591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGATTTGACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87283409	87282466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87282633_87282721_87282794_87283123_87283240_87283320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010542	chr16	-	345	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	9125	1846	9125	-1846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAAGTCTTTTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	87283551	87282721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87282794_87283123_87283240_87283320_87283409_87283482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010543	chr16	-	453	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	8074	2247	8074	-2247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTATTTGCAATTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	87284602	87283122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87283240_87283320_87283409_87283482_87283550_87284421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010544	chr16	-	473	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	6843	2445	6843	-2445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAGTAATGGTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	87285833	87283320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87283409_87283482_87283550_87284421_87284601_87285694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010545	chr16	-	562	4	ISM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	5206	4208	5121	-3546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCTACATTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	87287555	87284421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87284601_87285694_87285833_87287208_87287271_87287372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010546	chr16	-	336	3	NNC	ENSMUSG00000025613.14	novel	1470	14	NA	NA	5166	-4818	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGACTTGAAAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	87287510	87285693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_87285833_87287208_87287271_87287375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010547	chr16	-	508	4	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	4337	-4846	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATGGCATGATAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	87288339	87285721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_87285833_87287208_87287271_87287372_87287554_87288185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010548	chr16	-	506	4	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	1361	-6497	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAATAGTAGGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	87291315	87287372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_87287554_87288185_87288340_87290594_87290675_87291224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010549	chr16	-	444	4	ISM	ENSMUSG00000025613.14	ENSMUST00000175977.8	1470	14	-67	7318	18	-7318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCAAGTATTCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87292743	87288193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87288340_87290594_87290675_87291224_87291316_87292616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010550	chr16	+	1638	5	FSM	ENSMUSG00000025610.8	ENSMUST00000026700.8	1652	5	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTCTTGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87350231	87392224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_87350484_87352789_87352899_87367185_87367248_87378017_87378134_87391125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010551	chr16	+	198	1	ISM	ENSMUSG00000025610.8	ENSMUST00000026700.8	1652	5	41008	801	41008	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAGAATGAGTTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	87391225	87391423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_87391200_87391400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010552	chr16	-	688	3	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	132866	-1	132866	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTGCATCTATTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	87720198	87709554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87709758_87711041_87711293_87719964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010553	chr16	-	701	3	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	120056	1485	120056	-1485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCATCTCTTTCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	87733008	87711040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87711293_87719964_87720191_87732785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010554	chr16	-	753	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	109443	10408	109443	-10408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGGGGCAAGACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	87743621	87719963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87720191_87732785_87733004_87737425_87737545_87743432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010555	chr16	-	739	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	108176	23259	108176	-23259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCTCGACAATGACC	NA	NA	NA	NA	NA	NA	NA	NA	87744888	87732814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87733004_87737425_87737545_87743432_87743657_87744681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010556	chr16	-	546	3	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	106033	33875	106033	-33875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCGAGAATACTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	87747031	87743430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87743657_87744681_87744886_87746915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010557	chr16	-	558	4	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	21837	83246	21837	-83246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTAGATTCCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87831227	87792801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87792947_87803236_87803411_87806592_87806647_87831042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010558	chr16	-	807	5	ISM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	0	93711	0	-93711	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTGGTCTCCTGGACGG	NA	NA	NA	NA	NA	NA	NA	NA	87853064	87803266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_87803411_87806592_87806647_87831042_87831225_87848222_87848481_87852895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010559	chr16	+	463	4	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	0	1065	0	-1065	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTCATATAAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	90017641	90022152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010560	chr16	+	372	3	ISM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	3598	0	3598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	90021239	90023217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_90021314_90022032_90022151_90023037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010561	chr16	+	331	3	NNC	ENSMUSG00000022982.11	novel	641	5	NA	NA	3636	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	90021277	90023217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_90021314_90022032_90022148_90023037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010562	chr16	+	189	1	Genic_Genomic	ENSMUSG00000022982.11	novel	NA	NA	NA	NA	5391	4	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGACTCCTTTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	90023032	90023221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_90023000_90023200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010563	chr16	-	131	2	ISM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	32361	21429	32361	-21325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTCCCATGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	90048835	90047267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_90047326_90048762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010564	chr16	-	761	1	ISM	ENSMUSG00000116656.2	ENSMUST00000231663.2	1236	2	7287	0	7287	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTGTCCTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	90139243	90138482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_90138500_90139200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010565	chr16	-	885	2	FSM	ENSMUSG00000116656.2	ENSMUST00000231663.2	1236	2	8	343	8	-343	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCAGATGGACGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	90146522	90138825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_90139497_90146308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010566	chr16	-	889	3	ISM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	5645	-1	5645	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90518647	90516198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_90516867_90517541_90517639_90518523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010567	chr16	-	670	1	Genic_Genomic	ENSMUSG00000022978.12	novel	NA	NA	NA	NA	7424	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90516868	90516198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_90516200_90516900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010568	chr16	+	443	3	FSM	ENSMUSG00000039903.19	ENST00000514073.1	442	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGGCTTACCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90663131	90691547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_90663340_90672926_90673080_90691465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010569	chr16	+	288	2	FSM	ENSMUSG00000039903.19	ENST00000493276.1	278	2	-8	-2	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGGCTTACCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	90663134	90691548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_90663340_90691465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010570	chr16	+	194	2	NNC	ENSMUSG00000039903.19	novel	278	2	NA	NA	77	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGGCTTACCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	90663219	90691547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_90663340_90691473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010571	chr16	+	529	1	ISM	ENSMUSG00000039903.19	ENSMUST00000099548.10	1611	8	77421	3	37912	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCTGTACATTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	90701054	90701583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_90701100_90701600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010572	chr16	-	275	1	Genic_Genomic	ENSMUSG00000022972.11	novel	NA	NA	NA	NA	8641	1	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGTGTCATGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	90722970	90722695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_90722700_90723000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010573	chr16	-	477	3	ISM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	7882	28	7491	23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCTGTGTCACATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	90724120	90722724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_90722971_90723232_90723329_90723985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010574	chr16	-	160	2	ISM	ENSMUSG00000022972.11	ENST00000440966.5	892	6	7567	122	7567	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGGTGAAGCCAACACT	NA	NA	NA	NA	NA	NA	NA	NA	90724044	90722869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_90722971_90723985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010575	chr16	-	389	3	ISM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	7604	536	7213	-485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCATTGGGTGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	90724398	90723232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_90723329_90723985_90724118_90724237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010576	chr16	-	398	3	ISM	ENSMUSG00000022972.11	ENST00000440966.5	892	6	3560	1489	3560	-1489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGGGCAGGGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	90728051	90724236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_90724397_90726803_90726872_90727881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010577	chr16	-	441	2	ISM	ENSMUSG00000022972.11	ENST00000440966.5	892	6	-127	5130	-127	-5130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTCTCTCTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90731738	90727877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_90728050_90731469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010578	chr16	-	1082	2	NIC	ENSMUSG00000039851.12	novel	1086	2	NA	NA	2	2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCAATGCCAAGAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	90866036	90852280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_90853246_90865919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010579	chr16	-	1028	2	NNC	ENSMUSG00000039851.12	novel	1086	2	NA	NA	44	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAATGCCAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	90865989	90852282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_90853237_90865915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010580	chr16	-	1086	2	FSM	ENSMUSG00000039851.12	ENST00000479548.2	1086	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAATGCCAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	90866038	90852282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_90853246_90865915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010581	chr16	-	968	1	NIC	ENSMUSG00000039851.12	novel	2684	3	NA	NA	12783	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAATGCCAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	90853250	90852282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr16_-_90852300_90853200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010582	chr16	+	678	4	ISM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	13153	0	13104	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGGCTCTGTCTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	91182890	91190928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91182954_91184831_91185005_91188608_91188767_91190644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010583	chr16	+	1473	1	ISM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	31334	0	31218	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATAGTCTTTTTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	91201004	91202477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91201000_91202500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010584	chr16	+	555	4	ISM	ENSMUSG00000022967.14	ENSMUST00000117748.8	2771	12	10126	7492	10126	-7492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGAAATCATCTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	91292277	91296837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91292421_91293031_91293150_91296291_91296492_91296743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010585	chr16	+	548	2	ISM	ENSMUSG00000022967.14	ENSMUST00000117748.8	2771	12	18230	1873	18230	-1873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGGTGACATTTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	91300381	91302456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91300416_91301942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010586	chr16	+	483	1	ISM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	21721	0	21695	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATATTTTCTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	91303846	91304329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91303800_91304300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010587	chr16	+	442	3	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	7895	5513	7895	-5513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAACAGGAACAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	91351854	91356998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91351969_91354772_91354967_91356864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010588	chr16	+	453	3	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	10848	4934	10848	-4934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACAGCAAATGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	91354807	91357577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91354967_91356864_91357014_91357432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010589	chr16	+	512	2	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	14547	2400	14547	-2400	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTACTGGCAACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	91358506	91360111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91358666_91359758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010590	chr16	+	427	1	ISM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	18125	0	18125	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTGACTCCTGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	91362084	91362511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91362100_91362500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010591	chr16	-	1424	1	Genic_Genomic	ENSMUSG00000022964.15	novel	NA	NA	NA	NA	7465	2	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATCTGAGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91372812	91371388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_91371400_91372800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010592	chr16	+	1401	1	Antisense	novelGene_ENSMUSG00000022964.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGGATGGGTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91371647	91373048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr16_+_91371600_91373000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010593	chr16	-	1503	3	ISM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	17533	277	3122	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTCCAAGAAACAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	91377155	91371667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_91373047_91374861_91374920_91377089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010594	chr16	-	680	2	ISM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	24989	0	24962	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGAGGGCACTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	91418851	91418073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_91418637_91418734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010595	chr16	+	2653	3	ISM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	-65	7107	-64	-7107	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATGGACTCCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	91444702	91453814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91444873_91448517_91448685_91451498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010596	chr16	+	309	2	ISM	ENSMUSG00000022957.21	ENSMUST00000113993.8	3787	28	119154	19607	-55283	18537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTTACGGCAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	91645633	91647778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91645858_91647693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010597	chr16	+	295	2	ISM	ENSMUSG00000022957.21	ENSMUST00000113993.8	3787	28	140076	152	-34361	135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGCAGTTTACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	91666555	91667233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91666698_91667080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010598	chr16	+	287	1	ISM	ENSMUSG00000022957.21	ENST00000381291.8	5392	29	142016	0	-32664	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATGGAAACGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	91668252	91668539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_91668300_91668500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010599	chr16	-	184	1	Genic_Genomic	ENSMUSG00000022956.12	novel	NA	NA	NA	NA	6292	2	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGCCTTGTCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	91722283	91722099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_91722100_91722300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010600	chr16	-	385	3	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	5109	0	5109	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGGAGCCTTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	91723466	91722101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_91722280_91722428_91722516_91723346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010601	chr16	-	305	3	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	4699	358	4699	-358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAACCAAATACTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	91723876	91722459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_91722516_91723346_91723460_91723740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010602	chr16	-	287	3	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	2676	1314	2676	-1314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGCCTTTTCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	91725899	91723415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_91723460_91723740_91723871_91725786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010603	chr16	-	227	3	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	1276	1711	1276	-1711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCAAAGTGAAAAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	91727299	91723812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_91723871_91725786_91725898_91727241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010604	chr16	-	331	3	ISM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	-1	3685	-1	-3685	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGCTCTCTGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	91728576	91725786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_91725898_91727241_91727293_91728407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010605	chr16	+	164	2	NNC	ENSMUSG00000087190.3	novel	1871	6	NA	NA	-881	-31271	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGGAAATGTACGCGT	NA	NA	NA	NA	NA	NA	NA	NA	91727243	91728532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_91727276_91728400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010606	chr16	+	856	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	-6	-4	-6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTATTGCTTCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	91855151	91909119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_91855369_91896481_91896622_91908620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010607	chr16	+	844	3	NNC	ENSMUSG00000039680.11	novel	846	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	91855155	91909115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_91855369_91896485_91896622_91908620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010608	chr16	+	842	3	NNC	ENSMUSG00000039680.11	novel	846	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	91855161	91909115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_91855373_91896485_91896622_91908620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010609	chr16	+	521	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTGCATTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	92098169	92109929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010610	chr16	-	2108	4	FSM	ENSMUSG00000022951.17	ENST00000620920.4	2107	4	0	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGACGTTGTTGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	92194921	92188846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_92190517_92192753_92192914_92194150_92194370_92194862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010611	chr16	-	1143	1	ISM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	73044	7	4931	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGACGTTGTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	92189990	92188847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_92188800_92190000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010612	chr16	-	3951	1	ISM	ENSMUSG00000022952.18	ENSMUST00000023673.14	5861	8	220733	0	90709	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTGTCAGATCAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	92402304	92398353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_92398400_92402300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010613	chr16	-	4039	2	ISM	ENSMUSG00000022952.18	ENSMUST00000113956.10	4738	5	83567	-1407	82364	-783	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTAATAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92410649	92399136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_92403013_92410486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010614	chr16	-	1663	2	ISM	ENSMUSG00000022952.18	ENSMUST00000168195.8	1985	6	-964	83678	239	-83678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAAACTACTCGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	92493977	92485963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_92486021_92492371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010615	chr16	+	986	3	FSM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	-1	252	-1	-252	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTATCCAGACTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	93404723	93407141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_93405143_93405676_93405785_93406682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010616	chr16	+	502	1	Genic_Genomic	ENSMUSG00000051483.10	novel	NA	NA	NA	NA	2121	6	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTGGCCTCTACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	93406897	93407399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_93406900_93407400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010617	chr16	+	955	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	8	207	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAAACGTTAGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	93480110	93487671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_93480502_93481934_93482043_93487215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010618	chr16	+	859	3	FSM	ENSMUSG00000022947.9	ENST00000290354.6	858	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAAACGTTAGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	93480211	93487672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_93480506_93481934_93482043_93487215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010619	chr16	+	853	3	NNC	ENSMUSG00000022947.9	novel	858	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAAACGTTAGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	93480212	93487671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_93480506_93481934_93482043_93487219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010620	chr16	+	451	3	NNC	ENSMUSG00000022947.9	novel	1170	3	NA	NA	132	-267	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGAAGCTGGGGGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	93480343	93487404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_93480502_93481934_93482043_93487219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010621	chr16	+	433	1	Genic_Genomic	ENSMUSG00000022947.9	novel	NA	NA	NA	NA	7235	1	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTGGTTTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	93487446	93487879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_+_93487400_93487900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010622	chr16	-	1399	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	14	167	14	-167	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTCAAGATCTTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	93591775	93589190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_93590271_93591456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010623	chr16	+	319	1	ISM	ENSMUSG00000022946.11	ENSMUST00000227156.2	7340	36	80173	0	80173	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCATGTGTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	93607159	93607478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_93607200_93607500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010624	chr16	-	511	2	ISM	ENSMUSG00000022940.18	ENSMUST00000113917.8	805	4	4866	-30	4866	30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCCAACCCAGTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	94166282	94159591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_94160034_94166213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010625	chr16	-	159	1	ISM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	6089	0	5684	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	94165464	94165305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_94165300_94165500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010626	chr16	-	650	4	ISM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	489	0	84	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	94171064	94165305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010627	chr16	-	738	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	94171564	94165305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010628	chr16	-	232	2	ISM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	187	5656	187	-5468	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTGGCTTCAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	94171366	94170961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_94171052_94171224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010629	chr16	+	353	2	ISM	ENSMUSG00000040785.20	ENSMUST00000119131.3	3781	11	-150	13145	30	-8056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTATGAAGGCGTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	94171506	94184909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94171721_94184770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010630	chr16	+	333	5	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	5437	65982	3006	6166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGGTAAGCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94189203	94204220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010631	chr16	+	305	4	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	20407	58469	17976	13679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTTAACTTTGTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	94204173	94211733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94204228_94209412_94209576_94210542_94210589_94211691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010632	chr16	+	308	2	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	44976	39721	42545	32427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGAGCTTAAAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	94228742	94230481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94228787_94230217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010633	chr16	+	290	3	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	48946	34971	46515	-34848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGTACCTTCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	94232712	94235231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94232899_94233974_94234022_94235174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010634	chr16	+	391	2	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	56275	26649	53844	-26526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGCTAAAGTTGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	94240041	94243553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94240209_94243329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010635	chr16	+	293	2	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	65089	18183	62658	-18060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAACAGTTAAAAGACG	NA	NA	NA	NA	NA	NA	NA	NA	94248855	94252019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94249008_94251878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010636	chr16	+	301	2	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	75063	9343	72632	-9220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGAAACTATCTGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	94258829	94260859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94258892_94260620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010637	chr16	+	302	2	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	77020	6995	74589	-6872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGTTCATCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	94260786	94263207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94260962_94263080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010638	chr16	+	263	2	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	79314	6712	76883	-6589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATCATCTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	94263080	94263490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94263208_94263354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010639	chr16	+	1286	2	ISM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	83995	225	81564	-102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGTAGCTGTTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	94267761	94269977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94267855_94268784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010640	chr16	+	230	1	ISM	ENSMUSG00000040785.20	ENSMUST00000117648.9	7415	46	98373	0	83652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTTCACTGTCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	94269849	94270079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94269800_94270100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010641	chr16	-	1763	5	ISM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	21384	-1	20993	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGACTGCATATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94306305	94298640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010642	chr16	-	775	6	FSM	ENSMUSG00000022898.14	ENST00000476950.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAGTCCAGGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	94327298	94302393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_94302547_94302940_94303092_94305160_94305236_94311596_94311747_94313088_94313233_94327196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010643	chr16	-	697	6	FSM	ENSMUSG00000022898.14	ENST00000398998.1	712	6	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAGTCCAGGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	94327283	94302393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94327196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010644	chr16	+	991	3	ISM	ENSMUSG00000022897.16	ENST00000647188.2	6086	12	147	35398	147	-32508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTCATTATTATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	94370685	94460552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94371394_94412277_94412364_94460355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010645	chr16	+	733	4	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	95435	18758	95007	-18758	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCACACTGGAGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	94466772	94474302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94466964_94469663_94469812_94472161_94472449_94474195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010646	chr16	+	968	3	ISM	ENSMUSG00000022897.16	ENSMUST00000122284.9	2311	11	114672	-31	114244	31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTATAGAAGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94486009	94493091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94486201_94487337_94487463_94492439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010647	chr16	+	752	1	ISM	ENSMUSG00000022897.16	ENSMUST00000023614.5	5754	12	123434	425	123434	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTGATTATCATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	94495199	94495951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_94495200_94496000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010648	chr16	-	626	1	ISM	ENSMUSG00000040732.21	ENSMUST00000233881.2	3249	11	170571	0	30253	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTAGTCTCCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95160653	95160027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95160000_95160700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010649	chr16	-	1958	3	ISM	ENSMUSG00000040732.21	ENST00000398897.5	2525	8	21351	-1	21351	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTAGTCTCCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95169555	95160027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95160717_95160961_95162186_95169510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010650	chr16	-	1341	3	ISM	ENSMUSG00000040732.21	ENST00000398897.5	2525	8	20666	924	20666	116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTGAAATGGAGGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	95170240	95160952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95162186_95169510_95169559_95170180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010651	chr16	+	574	4	ISM	ENSMUSG00000022895.17	ENST00000653642.1	3094	8	1885	5761	1885	-5761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGCCAGGACTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	95512698	95516176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_95512820_95513129_95513331_95515380_95515474_95516017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010652	chr16	+	2553	4	ISM	ENSMUSG00000022895.17	ENST00000360214.8	3245	8	5375	-7	5375	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTGTAATGTTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	95516188	95522095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_95516230_95517077_95517342_95518891_95519011_95519966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010653	chr16	+	865	1	ISM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	18287	2	10415	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTTTGTAATGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	95521228	95522093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_95521200_95522100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010654	chr16	-	518	3	ISM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	6967	-1	6897	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTTTATTTTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	95785193	95781131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95781312_95783301_95783439_95784992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010655	chr16	-	535	4	ISM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	2845	2189	2775	-2085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGAAATGCTTGGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95789315	95783321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95783439_95784992_95785192_95788492_95788556_95789159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010656	chr16	-	449	4	ISM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	1373	3921	1303	-3817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCCTCTGCTGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	95790787	95785053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95785192_95788492_95788556_95789159_95789312_95790691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010657	chr16	-	467	3	ISM	ENSMUSG00000022913.17	ENSMUST00000233128.2	807	6	-69	7921	1	-7921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGACTTGACTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	95792159	95789157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95789312_95790691_95790799_95791953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010658	chr16	-	515	1	ISM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	15344	0	15246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	95868382	95867867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95867900_95868400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010659	chr16	-	592	2	ISM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	649	1432	551	-1432	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAGTAGCAGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	95883077	95869299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95869828_95883013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010660	chr16	-	1747	1	Genic_Genomic	ENSMUSG00000040681.17	novel	NA	NA	NA	NA	5242	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1001	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAAGCCATTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	95923562	95921815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr16_-_95921800_95923600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010661	chr16	-	1997	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	2	175	2	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTACCATGGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	95928927	95921992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010662	chr16	-	1669	2	NNC	ENSMUSG00000040681.17	novel	619	4	NA	NA	2772	-234	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACCAAATGAATGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	95926032	95922051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_95923611_95925922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010663	chr16	-	1686	2	NNC	ENSMUSG00000040681.17	novel	619	4	NA	NA	2757	-241	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCAACACCACCAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	95926047	95922058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_95923611_95925913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010664	chr16	-	1700	4	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	-451	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGATGGAGACACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	95928929	95922268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_95923618_95925922_95926046_95928352_95928404_95928752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010665	chr16	+	1679	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	83	733	72	-727	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATACTCCAGTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	95946689	95958319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010666	chr16	+	925	3	ISM	ENSMUSG00000023147.18	ENSMUST00000233566.2	2415	4	6419	1305	6414	584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGGTTAAACAAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	95953031	95957741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_95953179_95955280_95955396_95957078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010667	chr16	+	1275	1	ISM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	11171	0	11160	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGAAAGCGTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	95957777	95959052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_95957800_95959100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010668	chr16	-	399	4	ISM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	14938	0	14938	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCATCCCAGCAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	95965202	95960974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95961065_95963182_95963301_95963758_95963863_95965115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010669	chr16	-	408	4	ISM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	5067	2248	5067	-2248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTACCAAAGCAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	95975073	95963222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95963301_95963758_95963863_95965115_95965201_95974932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010670	chr16	-	711	4	ISM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	2761	2827	2761	-2827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAAACTCAAAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	95977379	95963801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95963863_95965115_95965201_95974932_95975071_95976952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010671	chr16	-	387	2	ISM	ENSMUSG00000045275.18	ENST00000485895.6	896	3	2849	-1	2849	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAAATCTGGGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	95977291	95976212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95976255_95976946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010672	chr16	-	356	2	NNC	ENSMUSG00000045275.18	novel	896	3	NA	NA	2877	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTAAAATCTGGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	95977263	95976213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_95976255_95976948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010673	chr16	-	721	2	ISM	ENSMUSG00000045275.18	ENST00000485895.6	896	3	4	863	4	-863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACGTCTTGCAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95980136	95977076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_-_95977468_95979806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010674	chr16	-	486	2	NNC	ENSMUSG00000045275.18	novel	896	3	NA	NA	73	-1024	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATAGGGAAATACGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	95980067	95977237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_-_95977463_95979806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010675	chr16	+	409	1	ISM	ENSMUSG00000040666.20	ENSMUST00000048770.16	1341	8	28075	0	27854	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTGGTCTTATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	96029724	96030133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_96029700_96030100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010676	chr16	+	711	4	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	10	26358	10	-26358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTGGTACCAACGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	97157998	97213359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97158302_97200833_97200923_97209476_97209694_97213257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010677	chr16	+	574	4	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	42841	25034	42841	-25034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTTTCCATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	97200829	97214683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97200923_97209476_97209694_97213257_97213387_97214548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010678	chr16	+	982	4	ISM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	56560	1300	56560	-1300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTCTTCAACCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	97214548	97238417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97214684_97216278_97216381_97225689_97225859_97237841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010679	chr16	+	639	1	ISM	ENSMUSG00000040605.8	ENSMUST00000047275.8	7646	9	81138	4418	81091	1	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTCGTGTGAGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	97239079	97239718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97239100_97239700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010680	chr16	+	420	3	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	62	14103	62	-14103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTTTAGACCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	97345733	97347679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97345861_97346811_97346950_97347524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010681	chr16	+	719	5	NNC	ENSMUSG00000023341.16	novel	1409	9	NA	NA	74	-13072	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCAAGGAACACCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	97345745	97348710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_97345861_97346811_97346954_97347529_97347680_97347946_97348086_97348537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010682	chr16	+	830	6	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	1139	9068	1139	-9068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTGAGCATTGTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	97346810	97352714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010683	chr16	+	632	4	NNC	ENSMUSG00000023341.16	novel	1409	9	NA	NA	1139	-13050	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTGCCTCTGCCATACT	NA	NA	NA	NA	NA	NA	NA	NA	97346810	97348732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr16_+_97346954_97347524_97347680_97347946_97348086_97348537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010684	chr16	+	663	5	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	2272	8539	2272	-8539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCGAAAAGAATTTCGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	97347943	97353243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010685	chr16	+	449	3	ISM	ENSMUSG00000023341.16	ENST00000619682.1	1409	9	6985	0	6985	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTGTTTCCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	97352656	97361782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97352719_97353123_97353267_97361538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010686	chr16	+	714	4	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	7452	-1	7452	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGTTTCCTGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	97353123	97361783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97353267_97357801_97357879_97359719_97359969_97361538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010687	chr16	+	579	3	ISM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	12121	0	12121	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTGTTTCCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	97357792	97361782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr16_+_97357879_97359719_97359969_97361538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010688	chr17	+	426	1	ISM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	83455	0	83455	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	3248708	3249134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3248700_3249100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010689	chr17	+	2120	5	ISM	ENSMUSG00000023800.16	ENST00000360366.8	5701	26	5	82120	5	-81449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGCTGCTATTTGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	3464224	3487552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010690	chr17	+	484	3	ISM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	14	70186	14	-70186	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTTGCTGTAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	3487514	3498815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3487689_3488901_3489049_3498652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010691	chr17	+	551	3	ISM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	16860	15665	16860	-15665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGGAAGTGGTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	3504360	3553336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3504627_3527449_3527554_3553155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010692	chr17	+	586	3	ISM	ENSMUSG00000023800.16	ENST00000275246.11	2371	13	78	12991	78	-12991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCCACTTCAGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	3532512	3556010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3532891_3553155_3553336_3555982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010693	chr17	+	414	3	ISM	ENSMUSG00000023800.16	ENST00000275246.11	2371	13	24605	9149	24605	-9149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAGGCTGGAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	3557039	3559852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3557168_3557983_3558093_3559675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010694	chr17	+	426	4	ISM	ENSMUSG00000023800.16	ENST00000275246.11	2371	13	25590	5821	25590	-5821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGTCTCTAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3558024	3563180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3558093_3559675_3559856_3561331_3561451_3563121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010695	chr17	+	641	3	ISM	ENSMUSG00000023800.16	ENST00000275246.11	2371	13	33828	199	33828	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACGGAAAGCAAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	3566262	3568802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3566333_3566837_3566993_3568386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010696	chr17	-	1778	4	ISM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	21516	0	21516	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCACATGACACGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	3586474	3568363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010697	chr17	+	506	1	ISM	ENSMUSG00000023800.16	ENSMUST00000169838.9	5725	27	191650	251	36063	2	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTAGTGTGCTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	3568497	3569003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_3568500_3569000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010698	chr17	+	365	1	FSM	ENSMUSG00000116620.2	ENSMUST00000231980.2	490	1	339	-214	339	214	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACGTGGCTGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	4931239	4931604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_4931200_4931600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010699	chr17	+	2664	3	ISM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	93698	803	93698	-395	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAACATTAGAGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	5386798	5393385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_5387584_5389490_5389622_5391637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010700	chr17	+	1801	1	ISM	ENSMUSG00000069729.15	ENSMUST00000115797.9	11325	20	347039	3743	99287	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCATTTTTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5392387	5394188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_5392400_5394200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010701	chr17	-	750	2	ISM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	6651	-1	6651	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGCGTGTGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5483867	5461143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_5461743_5483716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010702	chr17	-	603	1	Genic_Genomic	ENSMUSG00000004945.16	novel	NA	NA	NA	NA	28772	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGGCGTGTGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5461746	5461143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_5461100_5461700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010703	chr17	-	767	3	ISM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	609	72	609	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATATGTGCGCACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	5489909	5461216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_5461743_5483716_5483855_5489806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010704	chr17	-	596	2	ISM	ENSMUSG00000004945.16	ENSMUST00000185896.2	780	3	622	62	609	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGTGCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5489909	5483361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_5483855_5489806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010705	chr17	+	1574	5	ISM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	0	38111	0	-38111	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCAGCGAGATATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	5542887	5765280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010706	chr17	+	1177	3	FSM	ENSMUSG00000096965.8	ENSMUST00000181484.2	1174	3	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTCCAGACCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5849763	5853516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_5850269_5851473_5851617_5852987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010707	chr17	-	661	1	FSM	ENSMUSG00000068120.5	ENSMUST00000181584.2	441	1	-48	-172	-48	172	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGGGCCTGGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	5866963	5866302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_5866300_5867000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010708	chr17	+	1587	4	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	84749	89	84742	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAATTGTAAAGAACATG	NA	NA	NA	NA	NA	NA	NA	NA	5976352	5982140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_5976437_5977480_5977596_5978479_5978572_5980844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010709	chr17	+	1356	1	ISM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	89270	0	89263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCAGATTCCCAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	5980873	5982229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_5980900_5982200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010710	chr17	+	960	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	13	1272	13	113	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTAGTTTTCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6130073	6135520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_6130187_6131076_6131150_6134746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010711	chr17	+	869	3	FSM	ENSMUSG00000034345.15	ENSMUST00000100955.3	879	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTTTACCCTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	6130214	6135407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_6130350_6131076_6131150_6134746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010712	chr17	+	816	1	ISM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	5916	0	5772	0	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGGAGAGAGCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	6135976	6136792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_6136000_6136800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010713	chr17	+	740	2	ISM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	432	59443	380	-59443	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACCGTGGGGCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	6188802	6227214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_6189432_6227103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010714	chr17	+	493	2	ISM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	34117	2510	34117	-2510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCTGACGATCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	6354861	6356079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_6354919_6355643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010715	chr17	+	2384	1	ISM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	49071	0	35461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	6356205	6358589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_6356200_6358600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010716	chr17	-	1161	3	ISM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	5666	1993	5584	-1993	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAAGCAAAAAGAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	6362109	6360261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_6361219_6361567_6361646_6361983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010717	chr17	+	766	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	6	-1	6	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTTCCTTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	6697516	6703696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010718	chr17	+	551	4	NNC	ENSMUSG00000096255.3	novel	771	5	NA	NA	9	-199	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAACCACATGACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	6697519	6703496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_6697668_6702406_6702531_6702868_6702947_6703295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010719	chr17	+	511	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	6704959	6705470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_6705000_6705500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010720	chr17	+	676	3	ISM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	4939	1707	4939	-1707	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCATGCTGACATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	6874008	6875371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_6874135_6874472_6874551_6874899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010721	chr17	+	498	1	Genic_Genomic	ENSMUSG00000000579.15	novel	NA	NA	NA	NA	7512	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTGGTCATGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6876581	6877079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_6876600_6877100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010722	chr17	-	405	1	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	6914962	6914557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_-_6914600_6915000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010723	chr17	-	772	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	0	-1	0	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTTCCTTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	6923299	6916335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010724	chr17	-	1332	1	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	43412	0	16574	0	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGAGCGTTTATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	7006771	7005439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_7005400_7006800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010725	chr17	-	1814	4	ISM	ENSMUSG00000052397.9	ENST00000337147.11	2391	11	14363	-418	14363	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGAGGTTTGCCACCCG	NA	NA	NA	NA	NA	NA	NA	NA	7008982	7005560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010726	chr17	-	582	5	ISM	ENSMUSG00000052397.9	ENST00000337147.11	2391	11	1899	3793	1899	-3793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGAGGGCGGAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	7021446	7009771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_7009880_7010084_7010253_7014662_7014760_7020381_7020529_7021384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010727	chr17	-	198	1	Genic_Genomic	ENSMUSG00000023806.11	novel	NA	NA	NA	NA	43650	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTCTGACAAGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	7172008	7171810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_7171800_7172000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010728	chr17	-	206	2	ISM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	42835	288	42738	-288	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCACATTGCACACGCAG	NA	NA	NA	NA	NA	NA	NA	NA	7172920	7172402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_7172520_7172831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010729	chr17	-	809	5	FSM	ENSMUSG00000023806.11	ENST00000449822.5	821	5	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTACTCTGAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	7215646	7172831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_7172919_7175430_7175594_7177506_7177711_7209070_7209156_7215376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010730	chr17	-	491	3	ISM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	34260	5391	34163	-4674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTCGCTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	7181495	7177505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_7177711_7178676_7178823_7181355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010731	chr17	-	226	2	ISM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	6603	9242	6506	-8525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACAGGGCCACACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	7209152	7181356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_7181498_7209067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010732	chr17	-	526	1	ISM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	5620	0	5620	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACACACTGTTCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	7222935	7222409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_7222400_7222900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010733	chr17	+	417	2	ISM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	322	27188	322	-27188	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACACCGAGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	8164806	8171468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8165136_8171380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010734	chr17	+	266	2	ISM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	27172	5767	27172	-5767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGCATATGAAGAGATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	8191656	8192889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8191802_8192768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010735	chr17	+	222	2	ISM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	28429	3617	28429	-3617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGACACTTCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	8192913	8195039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8192973_8194876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010736	chr17	+	431	2	ISM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	33063	366	33063	-366	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAACAAATCAATTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	8197547	8198290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8197637_8197948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010737	chr17	+	389	1	Genic_Genomic	ENSMUSG00000073471.4	novel	NA	NA	NA	NA	33784	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTCTGACAAGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	8198268	8198657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_8198300_8198700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010738	chr17	+	337	4	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	374	26155	374	-26155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTATCCTGCGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	8384752	8388973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8384810_8387866_8387922_8388359_8388449_8388837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010739	chr17	+	445	3	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	3995	13837	3995	-13837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTCCTCTTCAGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	8388373	8401291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8388449_8388837_8388976_8401059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010740	chr17	+	376	3	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	4565	11779	4565	-11779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTGAAGACTCTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	8388943	8403349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8388976_8401059_8401287_8403232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010741	chr17	+	335	3	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	16756	9714	16756	-9714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAGATTTCAGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	8401134	8405414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8401287_8403232_8403346_8405344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010742	chr17	+	315	4	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	18858	4015	18858	-4015	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGGCCACAGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	8403236	8411113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8403346_8405344_8405414_8410229_8410270_8411016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010743	chr17	+	374	2	ISM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	26635	1364	26635	-1364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGGAGCTCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	8411013	8413764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8411114_8413490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010744	chr17	+	1093	1	ISM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	30211	0	30165	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTTATCCTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	8414543	8415636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_8414500_8415600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010745	chr17	+	955	4	FSM	ENSMUSG00000023861.18	ENST00000621630.1	833	4	-118	-4	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTGTGACTATATATCT	NA	NA	NA	NA	NA	NA	NA	NA	8502594	8516495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010746	chr17	-	745	6	ISM	ENSMUSG00000062078.16	ENST00000424802.7	954	7	35959	0	35959	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTGGATGAAGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	10501843	10434359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_10434404_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010747	chr17	-	1186	6	FSM	ENSMUSG00000037196.7	ENST00000337019.7	1365	6	184	-5	184	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCTCTGTGCTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	11058696	10621836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_10622408_10742659_10742769_10795393_10795544_10815996_10816169_10996021_10996157_11058647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010748	chr17	-	566	1	ISM	ENSMUSG00000037196.7	ENST00000337019.7	1365	6	436473	0	436473	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTACAGTGGCTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	10622407	10621841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_10621800_10622400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010749	chr17	-	617	2	ISM	ENSMUSG00000037196.7	ENSMUST00000041463.7	1475	5	263655	0	263337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCACCCTTTGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	10795543	10621940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_10622408_10795393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010750	chr17	+	699	5	ISM	ENSMUSG00000023826.17	ENST00000366898.6	865	6	170336	-1	170336	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGAAAAGCCCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	11456348	11854332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_11456590_11522476_11522599_11653436_11653521_11711565_11711682_11854196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010751	chr17	-	208	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCCTCGTGATGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	12650035	12649827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_-_12649800_12650000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010752	chr17	-	1201	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTACTGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13135214	13130235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010753	chr17	+	1594	6	ISM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	4356	0	4296	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCAAGTGCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	13139624	13143954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010754	chr17	+	1285	4	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	6168	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCAAGTGCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	13141496	13143954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_13141620_13142104_13142298_13142416_13142578_13143146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010755	chr17	-	1001	1	Genic_Genomic	ENSMUSG00000023832.15	novel	NA	NA	NA	NA	16483	2	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGGGAGGTATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	13162775	13161774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_13161800_13162800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010756	chr17	-	1447	5	ISM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	11754	-364	11754	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGGAACTGACAGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	13167504	13161965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010757	chr17	+	405	1	FSM	ENSMUSG00000089695.3	ENSMUST00000160654.3	423	1	107	-89	107	89	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTCTTGGTCCCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	13181761	13182166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_13181800_13182200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010758	chr17	-	1554	3	ISM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	16821	-3	16754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTTTTCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	13194325	13185682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_13186939_13188291_13188447_13194182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010759	chr17	-	677	1	ISM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	18831	0	18831	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGTGATTCCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	13192248	13191571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_13191600_13192200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010760	chr17	-	340	1	ISM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	18307	861	18307	6	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATCTTTTGTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	13192772	13192432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_13192400_13192800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010761	chr17	-	893	3	ISM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	10736	1219	10382	-1219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGAACTACTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	13200697	13193657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_13194362_13199708_13199837_13200636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010762	chr17	+	4353	3	FSM	ENSMUSG00000006818.6	ENST00000337404.8	497	3	0	-3856	0	-1103	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCCGCTGGAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13227106	13237918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_13227274_13232319_13232500_13233912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010763	chr17	+	4207	4	ISM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	479	1290	76	-1290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATACATGCCACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	13227182	13237731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_13227274_13229406_13229524_13232319_13232500_13233912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010764	chr17	+	4034	3	NNC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	2332	-1344	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAAGCTCTGTTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	13229438	13237677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_13229528_13232319_13232500_13233912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010765	chr17	+	153	1	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	6804	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCACGGCCACATTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	13233910	13234063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_13233900_13234100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010766	chr17	+	4034	1	Genic_Genomic	ENSMUSG00000006818.6	novel	NA	NA	NA	NA	7885	4	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTGAATACCTAACGT	NA	NA	NA	NA	NA	NA	NA	NA	13234991	13239025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_13235000_13239000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010767	chr17	-	305	1	FSM	ENSMUSG00000089883.2	ENSMUST00000160079.2	487	1	182	0	182	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGTACACAAAGAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	14082883	14082578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_14082600_14082900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010768	chr17	+	449	2	ISM	ENSMUSG00000023886.11	ENSMUST00000232923.2	588	3	-51	437	2	-437	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGAATTGCAAAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	14499769	14545953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_14500062_14545796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010769	chr17	+	414	2	ISM	ENSMUSG00000023886.11	ENSMUST00000233344.2	2817	13	122005	906	121983	-906	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCAGAGCCTACCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	14621803	14624129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_14621845_14623756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010770	chr17	+	409	1	Genic_Genomic	ENSMUSG00000023886.11	novel	NA	NA	NA	NA	124824	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATAAAAGATTACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	14624644	14625053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_14624600_14625100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010771	chr17	-	312	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	23053	0	23053	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTCTGTAAATGAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	14887494	14885769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14885885_14887297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010772	chr17	-	489	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	20212	1766	20212	-1766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGGAGCGAAGACCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	14890335	14887535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14887783_14888986_14889127_14890233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010773	chr17	-	425	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	19474	3248	19474	-3248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCGGACCTCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	14891073	14889017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14889127_14890233_14890332_14890855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010774	chr17	-	440	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	18785	5146	18785	-5146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTACTGGCGAGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	14891762	14890915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14891128_14891534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010775	chr17	-	453	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	16919	5763	16919	-5763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGAGATCCTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	14893628	14891532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14891763_14893405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010776	chr17	-	326	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	16120	7665	16120	-7665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAACCCAGACCAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	14894427	14893434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14893641_14894307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010777	chr17	-	389	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	13190	8538	13190	-8538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGAGATGTGTCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	14897357	14894307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14894427_14896468_14896629_14897247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010778	chr17	-	450	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	11381	10736	11381	-10736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGATGCCTGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	14899166	14896505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14896629_14897247_14897356_14898947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010779	chr17	-	502	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	10246	13177	10246	-13177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTCACAGTCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	14900301	14898946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14899167_14899943_14900097_14900172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010780	chr17	-	225	2	NNC	ENSMUSG00000023885.10	novel	3892	20	NA	NA	10251	-14230	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGGGAACCAACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	14900296	14899999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_14900097_14900168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010781	chr17	-	349	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	9819	14280	9819	-14280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTCAACACCAACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	14900728	14900049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14900097_14900172_14900301_14900554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010782	chr17	-	357	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	8871	14778	8871	-14778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	14901676	14900547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14900729_14901500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010783	chr17	-	470	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	6897	15727	6897	-15727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGCTGCTGGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	14903650	14901496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14901678_14901908_14902098_14903550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010784	chr17	-	307	3	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	6071	16261	6071	-16261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACCCAGCAGAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	14904476	14902030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14902098_14903550_14903648_14904333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010785	chr17	-	327	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	4343	18575	4343	-18575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGCAAGGTGAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	14906204	14904344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14904475_14906007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010786	chr17	-	283	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	2394	20238	2394	-20238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTACCTGGTGGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	14908153	14906007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14906205_14908067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010787	chr17	-	292	2	ISM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	352	22298	352	-22298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTAAGCTCTGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	14910195	14908067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_14908153_14909988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010788	chr17	+	627	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	-1	1897	-1	-949	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTCACTGACCCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	15163490	15164299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_15163582_15163763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010789	chr17	+	1416	1	ISM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	387	950	302	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTTTAAGGTCATCG	NA	NA	NA	NA	NA	NA	NA	NA	15163832	15165248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_15163800_15165200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010790	chr17	-	363	2	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	14890	-2	14890	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGACCTTAAACATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	15166645	15165268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15165447_15166460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010791	chr17	+	539	1	Genic_Genomic	ENSMUSG00000050088.10	novel	NA	NA	NA	NA	2130	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCTGTTACTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	15165660	15166199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_15165700_15166200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010792	chr17	-	363	3	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	8533	1669	8533	-1669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCCCAGTGTGATAACA	NA	NA	NA	NA	NA	NA	NA	NA	15173002	15166939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15167026_15170821_15170978_15172881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010793	chr17	-	368	3	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	7156	5596	7156	-5596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCAAACGTTCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	15174379	15170866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15170978_15172881_15173036_15174276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010794	chr17	-	353	3	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	6332	7672	6332	-7672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCAGATGATGGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	15175203	15172942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15173036_15174276_15174387_15175053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010795	chr17	-	375	4	ISM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	4473	9843	4473	-9843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACTTAAACCGGGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	15177062	15175113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15175204_15175294_15175429_15176245_15176330_15176995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010796	chr17	+	853	2	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	104	31096	104	-31096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTCTGCCTAGAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	15616567	15622604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_15616823_15622006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010797	chr17	+	866	2	NNC	ENSMUSG00000014763.9	novel	4420	11	NA	NA	6140	-27610	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAACACCCTGGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	15622603	15626090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_15623396_15626016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010798	chr17	+	827	1	ISM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	36410	0	36410	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAATAGGCCACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	15652873	15653700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_15652900_15653700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010799	chr17	-	269	1	Genic_Genomic	ENSMUSG00000014769.11	novel	NA	NA	NA	NA	23013	4	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTGCACTAGTTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	15695547	15695278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_15695300_15695500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010800	chr17	-	444	3	ISM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	8009	982	8009	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTGTGGCACAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	15710551	15696264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15696468_15697576_15697684_15710417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010801	chr17	-	269	3	NNC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	8010	-213	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCTGACGCTGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	15710550	15696433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_15696468_15697576_15697679_15710417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010802	chr17	-	298	3	ISM	ENSMUSG00000014769.11	ENSMUST00000231341.2	1970	5	5160	1377	5119	-1377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTCTGCTCGACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	15713441	15697597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15697684_15710417_15710548_15713359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010803	chr17	-	312	3	ISM	ENSMUSG00000014769.11	ENSMUST00000231341.2	1970	5	3815	14206	3774	-14206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGAAGGTAACAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	15714786	15710426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15710548_15713359_15713442_15714677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010804	chr17	-	336	3	ISM	ENSMUSG00000014769.11	ENSMUST00000231341.2	1970	5	41	17139	0	-17139	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGCTTTTGAACATGT	NA	NA	NA	NA	NA	NA	NA	NA	15718560	15713359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15713442_15714677_15714786_15718414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010805	chr17	+	246	2	ISM	ENSMUSG00000014767.18	ENSMUST00000117593.8	2067	10	3002	13075	3002	-13075	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACAGTCTCTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	15723223	15724614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_15723391_15724535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010806	chr17	-	535	4	ISM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	1935	0	1907	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGTACCTCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	15745628	15741836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010807	chr17	-	504	4	ISM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	687	429	659	-429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATCTGGATTTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	15746876	15742265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15742292_15743064_15743169_15745530_15745663_15746634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010808	chr17	-	570	4	FSM	ENSMUSG00000014771.14	ENST00000443345.2	567	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCATCAATTTTACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	15747539	15745520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_15745663_15746634_15746875_15747252_15747347_15747445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010809	chr17	-	676	3	FSM	ENSMUSG00000014771.14	ENST00000547904.1	651	3	-23	-2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGCATCAATTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	15747558	15745523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_15745654_15746634_15746875_15747252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010810	chr17	-	465	3	ISM	ENSMUSG00000014771.14	ENST00000443345.2	567	4	142	59	140	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGGTTGTGGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	15747395	15745580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15745663_15746634_15746875_15747252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010811	chr17	-	401	1	ISM	ENSMUSG00000051977.17	ENSMUST00000167994.10	3438	10	18184	1638	17825	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGGCGGGGCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	15765379	15764978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15765000_15765400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010812	chr17	-	485	2	ISM	ENSMUSG00000051977.17	ENST00000449207.8	1717	9	9463	287	9463	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATTGCATCAGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	15773741	15765265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15765623_15773613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010813	chr17	-	404	3	ISM	ENSMUSG00000051977.17	ENSMUST00000147532.8	1447	11	6894	1979	5496	-1979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACTTGGAGTATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	15777708	15775464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_15775621_15775827_15775930_15777562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010814	chr17	-	3241	4	FSM	ENSMUSG00000048027.10	ENST00000513185.3	3255	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGATGTTTGTTCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	16046679	16024927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_16026098_16026911_16028064_16040927_16041441_16046273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010815	chr17	-	2757	3	NIC	ENSMUSG00000048027.10	novel	3255	4	NA	NA	371	-941	intron_retention	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCACCTTGGGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	16046322	16025868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_16028064_16040927_16041441_16046273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010816	chr17	+	2111	2	ISM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	21793	319	21793	-319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACACGTACTGGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	17306167	17309571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_17306213_17307505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010817	chr17	+	2098	1	Genic_Genomic	ENSMUSG00000096696.2	novel	NA	NA	NA	NA	23421	3	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGCAACATAGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	17307795	17309893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_17307800_17309900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010818	chr17	-	1078	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	-55	-338	-55	338	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCAAAGCACACATTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	17566457	17565379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_17565400_17566500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010819	chr17	+	827	2	ISM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	15714	660	15451	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCTTTCCCCAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	17610284	17614501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_17610327_17613716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010820	chr17	+	795	1	ISM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	19796	0	19533	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGGCTTTACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	17614366	17615161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_17614400_17615200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010821	chr17	+	2598	4	ISM	ENSMUSG00000047786.13	ENSMUST00000115576.3	3116	6	40975	0	-5173	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGTCCATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17663908	17679649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_17664051_17666229_17666326_17674521_17674600_17677367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010822	chr17	+	2284	1	NIC	ENSMUSG00000047786.13	novel	3116	6	NA	NA	8284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGTCCATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17677365	17679649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_17677400_17679600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010823	chr17	-	127	2	ISM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	590	57900	590	-57900	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATTTAGCCAAAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	17844719	17799571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_17799635_17844655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010824	chr17	-	2037	4	ISM	ENSMUSG00000003665.8	ENSMUST00000003762.8	2095	5	4547	0	4547	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCCCACTTTGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	18070903	18063584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_18064562_18067812_18067946_18068409_18068636_18070202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010825	chr17	+	637	1	ISM	ENSMUSG00000023882.16	ENSMUST00000165230.8	2832	5	11295	482	11289	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTTGTTTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21654783	21655420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_21654800_21655400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010826	chr17	+	2321	3	ISM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	5930	107	5930	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTATCTGCTTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	21676565	21685742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_21676651_21681922_21682050_21683633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010827	chr17	+	2130	1	Genic_Genomic	ENSMUSG00000023892.9	novel	NA	NA	NA	NA	13088	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTCTCTCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	21683723	21685853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_21683700_21685900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010828	chr17	+	252	2	ISM	ENSMUSG00000057409.8	ENSMUST00000076664.7	2058	4	13722	1656	13722	-1656	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACTATAGAAACCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	21725239	21728370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_21725370_21728248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010829	chr17	+	220	1	ISM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	21256	0	18998	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGAAAATGTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	21730515	21730735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_21730500_21730700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010830	chr17	+	1312	2	ISM	ENSMUSG00000051341.7	ENSMUST00000079242.4	2175	3	2086	836	2086	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGGTTCTCAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	21777393	21781492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_21777524_21780310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010831	chr17	+	1273	1	Genic_Genomic	ENSMUSG00000051341.7	novel	NA	NA	NA	NA	6298	15	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGTAAGGACAACATGC	NA	NA	NA	NA	NA	NA	NA	NA	21781605	21782878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_21781600_21782900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010832	chr17	-	244	2	ISM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	20601	6035	-8828	-4809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAGTGTCCTGTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	22160831	22151975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_22152095_22160706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010833	chr17	+	782	1	ISM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	31033	0	31026	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGTTTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	22212565	22213347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_22212600_22213300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010834	chr17	-	2272	2	ISM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	18706	0	18706	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCTGTTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	22366465	22363339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_22365516_22366369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010835	chr17	-	2468	1	ISM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	26499	0	26499	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	22507319	22504851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_22504900_22507300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010836	chr17	-	1216	1	ISM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	22196	0	22196	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	22558185	22556969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_22557000_22558200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010837	chr17	-	1225	2	ISM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	20354	974	20354	-974	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTAGTGAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	22560027	22557943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_22559089_22559947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010838	chr17	-	563	2	FSM	ENSMUSG00000117183.2	ENST00000377073.4	688	2	136	-11	136	11	multi-exon	TRUE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGACAAATGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	22934168	22933268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_22933520_22933856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010839	chr17	-	300	1	ISM	ENSMUSG00000117183.2	ENSMUST00000232973.2	2370	2	2346	510	732	7	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAGTAAATGTGACAAATG	NA	NA	NA	NA	NA	NA	NA	NA	22933572	22933272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_22933300_22933600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010840	chr17	-	363	2	NNC	ENSMUSG00000117183.2	novel	688	2	NA	NA	322	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAAATGTAGTAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	22933982	22933279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_22933520_22933859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010841	chr17	-	614	5	FSM	ENSMUSG00000067882.15	ENST00000428155.1	616	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGGACGAGCAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	23772542	23770053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_23770156_23770980_23771085_23771535_23771605_23771964_23772082_23772320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010842	chr17	-	404	1	ISM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	7068	0	7068	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCTTTAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	23776144	23775740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23775700_23776100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010843	chr17	-	441	2	ISM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	2758	3230	2758	-3230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCAGCCATGGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	23780454	23778970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23779077_23780119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010844	chr17	-	315	1	ISM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	10074	0	10074	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	23795132	23794817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23794800_23795100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010845	chr17	-	345	2	ISM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	24	9634	24	-9626	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCGCGGCTACTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	23805182	23804451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23804549_23804934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010846	chr17	+	693	4	FSM	ENSMUSG00000023904.11	ENSMUST00000180140.8	693	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23892569	23894201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_23892678_23892942_23893043_23893508_23893650_23893857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010847	chr17	+	696	4	NNC	ENSMUSG00000023904.11	novel	693	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23892570	23894201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_23892682_23892942_23893043_23893508_23893650_23893857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010848	chr17	+	946	3	FSM	ENSMUSG00000023904.11	ENSMUST00000024697.5	946	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23892581	23894201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_23893043_23893508_23893650_23893857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010849	chr17	-	342	1	Genic_Genomic	ENSMUSG00000023905.16	novel	NA	NA	NA	NA	1638	4	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGATCCCTAACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	23894756	23894414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_23894400_23894800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010850	chr17	-	524	3	ISM	ENSMUSG00000023905.16	ENSMUST00000233428.2	635	5	794	-57	794	57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACCCATACTAAGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	23895600	23894739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23895021_23895112_23895248_23895492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010851	chr17	-	378	3	ISM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	4	694	4	-316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGCTCTCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	23896438	23895112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23895248_23895492_23895598_23896300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010852	chr17	-	323	3	NNC	ENSMUSG00000023905.16	novel	984	4	NA	NA	-19	-346	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATGCCGCCGGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	23896422	23895142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_23895239_23895492_23895598_23896300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010853	chr17	-	680	1	ISM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	3533	0	3533	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGCCTGACCACATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	23955839	23955159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23955200_23955800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010854	chr17	-	1249	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	40	1286	40	-1286	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAACCAGCACATGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	23959332	23956445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_23956974_23957113_23957336_23958833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010855	chr17	-	663	1	NIC	ENSMUSG00000040680.10	novel	2123	10	NA	NA	2930	4	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCAACAAAAGTGATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	23961069	23960406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_23960400_23961100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010856	chr17	-	1239	4	ISM	ENSMUSG00000040680.10	ENST00000572045.5	2122	7	1447	424	1341	-424	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCAGGGGACTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	23962658	23960834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23961457_23961535_23961869_23962193_23962348_23962528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010857	chr17	-	722	3	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	2159	548	2159	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTCCCTAGGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	23961840	23960958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23961250_23961330_23961457_23961535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010858	chr17	-	300	2	NNC	ENSMUSG00000040680.10	novel	1935	8	NA	NA	2542	-663	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGACGAAGCTAGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	23961457	23961073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_23961250_23961333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010859	chr17	-	340	3	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	1212	1783	1212	-1783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGACGTAGACCAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	23962787	23962193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23962348_23962528_23962654_23962726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010860	chr17	-	397	3	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	305	2116	305	-2116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCCTAGAGCCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	23963694	23962526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23962654_23962726_23962819_23963516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010861	chr17	-	339	3	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	19	2316	19	-2316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAAAGTCAAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	23963980	23962726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23962819_23963516_23963692_23963908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010862	chr17	-	1054	3	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	3310	3	3310	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTGTGTTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	23979439	23974390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23974919_23975520_23975785_23979177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010863	chr17	-	531	1	NIC	ENSMUSG00000040097.17	novel	2798	6	NA	NA	7828	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTGTGTTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	23974921	23974390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_23974400_23974900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010864	chr17	-	899	3	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	2685	1246	2685	-1240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGCGGGTGATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	23980064	23975633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23975785_23979177_23979442_23979580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010865	chr17	-	835	2	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	1249	5229	1249	-5223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCCCCCCGAGGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	23981500	23979616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23980091_23981139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010866	chr17	-	455	2	ISM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	702	6824	702	-6818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGCAGGGGTACCGG	NA	NA	NA	NA	NA	NA	NA	NA	23982047	23981211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_23981569_23981949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010867	chr17	+	3691	2	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	9241	6088	9241	-6083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAAACCCAAGACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	24031435	24037627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24031595_24034095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010868	chr17	+	3919	2	ISM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	14841	2039	14841	-2034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGCTTTCTTGCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	24037035	24041676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24040665_24041386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010869	chr17	-	542	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCATTTTTATTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	24048111	24043707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010870	chr17	-	495	3	ISM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	147	-1	-10	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTCATTTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	24047963	24043710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24043954_24046441_24046548_24047817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010871	chr17	-	475	3	NNC	ENSMUSG00000055839.7	novel	537	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCATTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	24047953	24043711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_24043954_24046441_24046539_24047817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010872	chr17	-	298	2	FSM	ENSMUSG00000055839.7	ENST00000572954.1	300	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTACCTGATTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	24047951	24043789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_24043954_24047817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010873	chr17	-	166	1	NIC	ENSMUSG00000055839.7	novel	537	4	NA	NA	3998	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTACCTGATTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	24043955	24043789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_24043800_24044000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010874	chr17	-	590	1	Genic_Genomic	ENSMUSG00000016946.7	novel	NA	NA	NA	NA	25163	1	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCAACTGTGAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	24267296	24266706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_24266700_24267300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010875	chr17	-	961	5	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	13132	1175	13132	-1175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCTGAGGCTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24279327	24267882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010876	chr17	-	582	5	ISM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	42	8299	42	-8299	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAACTATGGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	24292417	24275006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010877	chr17	-	525	4	ISM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	5278	0	5278	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATGTCTAAAACAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	24377033	24374886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24375060_24375544_24375647_24376713_24376822_24376891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010878	chr17	-	740	4	ISM	ENSMUSG00000036820.13	ENST00000302956.8	1463	10	5608	0	5275	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATGTCTAAAACAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	24377036	24374886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24375060_24375544_24375647_24376501_24376822_24376891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010879	chr17	-	446	4	ISM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	5103	658	5103	-658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCCCATGCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	24377208	24375544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24375647_24376713_24376822_24376891_24377037_24377117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010880	chr17	-	774	4	ISM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	4809	1614	4809	-1614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGGCTGGTGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	24377502	24376500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24376822_24376891_24377037_24377117_24377207_24377283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010881	chr17	-	520	5	ISM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	221	2128	221	-2128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGGGCTTCTGACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	24382090	24377014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010882	chr17	-	505	4	ISM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	16	2426	16	-2426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCAAGGCATCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	24382295	24377312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24377497_24377613_24377669_24381949_24382090_24382169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010883	chr17	-	666	1	Genic_Genomic	ENSMUSG00000024121.14	novel	NA	NA	NA	NA	4931	1	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGTGTTCTGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	24383504	24382838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_24382800_24383500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010884	chr17	-	1126	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	1	56	1	-56	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGCTCCTCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24388434	24382895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_24383583_24383672_24383857_24388179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010885	chr17	-	690	2	NNC	ENSMUSG00000024121.14	novel	1183	3	NA	NA	4583	57	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTTTATTTATAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	24383852	24383069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_24383580_24383672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010886	chr17	-	443	2	ISM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	4488	562	4488	-562	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATGACACTAGAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	24435276	24434589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24434980_24435223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010887	chr17	-	417	3	ISM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	174	4822	174	-4822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACAGACTACGATCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24439590	24438849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24439108_24439225_24439285_24439490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010888	chr17	-	1562	1	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	27650	0	27650	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTTCTATCCCAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	24442733	24441171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24441200_24442700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010889	chr17	-	1592	2	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	26380	679	26380	-679	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTGTGATTTATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	24444003	24441850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24443321_24443881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010890	chr17	-	967	4	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	36926	2359	36926	-2359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATAGGTGAGATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24510834	24486531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24486712_24507969_24508175_24508309_24508584_24510526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010891	chr17	-	976	5	ISM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	32422	23871	32422	-23871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGCTGTGTTCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24515338	24508043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24508175_24508309_24508584_24510526_24510834_24514058_24514222_24515237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010892	chr17	+	634	3	ISM	ENSMUSG00000034681.18	ENST00000568631.5	1393	8	0	6641	0	-6641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCAGAGGGAACCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	24634175	24637588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24634471_24637011_24637193_24637430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010893	chr17	+	1560	6	ISM	ENSMUSG00000034681.18	ENST00000565678.5	2050	8	3255	-20	3255	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	24637430	24644872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010894	chr17	+	979	3	NNC	ENSMUSG00000034681.18	novel	1646	7	NA	NA	6969	-93	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATAAAATTTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	24641144	24644759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_24641282_24643375_24643518_24644059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010895	chr17	+	816	1	NIC	ENSMUSG00000034681.18	novel	1816	8	NA	NA	9882	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGGTTTTACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	24644057	24644873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_24644100_24644900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010896	chr17	+	1098	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	39	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	24645653	24658294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010897	chr17	+	2628	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCCTCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	24689364	24692084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_24690124_24690215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010898	chr17	+	2626	2	NNC	ENSMUSG00000043445.8	novel	2627	2	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCCTCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	24689370	24692084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_24690128_24690215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010899	chr17	-	1818	1	ISM	ENSMUSG00000024142.16	ENSMUST00000234941.2	3223	9	3685	2	3668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGAGGCCGATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	24694344	24692526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24692500_24694300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010900	chr17	+	764	5	FSM	ENSMUSG00000045744.12	ENSMUST00000054946.10	997	5	233	0	150	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGGTAATTTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	24693090	24694443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_24693213_24693378_24693535_24693612_24693715_24693963_24694118_24694213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010901	chr17	-	1860	2	ISM	ENSMUSG00000024142.16	ENSMUST00000234686.2	3855	8	2873	663	2868	-662	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAAGCCCCCCAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	24695144	24693190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24694926_24695019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010902	chr17	-	626	2	ISM	ENSMUSG00000052752.16	ENSMUST00000070777.13	2384	19	9560	0	9560	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24728622	24727823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24728333_24728505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010903	chr17	-	511	1	NIC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	9848	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24728334	24727823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_24727800_24728300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010904	chr17	+	3080	2	ISM	ENSMUSG00000032855.7	ENST00000532739.1	9750	29	8921	10911	-4260	-10057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTCATAGTGTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24792235	24795509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24795218_24795411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010905	chr17	+	629	3	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	4	8285	4	-8285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGCTTAACCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	24796499	24797281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24796637_24796723_24797004_24797069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010906	chr17	+	693	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	341	7630	341	-7630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGATGAATGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	24796836	24797936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24797004_24797069_24797284_24797352_24797513_24797784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010907	chr17	+	967	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	847	6136	847	-6136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCCTGTGGGTTCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	24797342	24799430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24797513_24797784_24797935_24798694_24798840_24798928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010908	chr17	+	1081	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	2553	4842	2553	-4842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCAGGTAAGGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	24799048	24800724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24799550_24799848_24800006_24800164_24800400_24800536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010909	chr17	+	745	4	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	3670	526	3670	-526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCTACTACCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	24800165	24805040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24800400_24800536_24800733_24804650_24804822_24804896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010910	chr17	+	482	3	ISM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	8405	0	8405	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGTAAGGGCCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24804900	24805566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24805041_24805137_24805349_24805435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010911	chr17	-	1082	1	Genic_Genomic	ENSMUSG00000002504.16	novel	NA	NA	NA	NA	4591	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGCCTGTGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	24859340	24858258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_24858300_24859300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010912	chr17	-	1140	2	ISM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	4327	33	4294	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCGCCCTCAAATTAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	24859637	24858292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24859364_24859568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010913	chr17	-	757	2	ISM	ENSMUSG00000002504.16	ENSMUST00000234505.2	1137	5	3218	-106	3218	99	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCTCACATGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	24860713	24858637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24859364_24860682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010914	chr17	-	557	3	ISM	ENSMUSG00000002504.16	ENST00000432365.6	1477	7	8426	144	3205	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATTCATGTTTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	24860726	24858880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24859331_24859568_24859632_24860682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010915	chr17	-	471	3	ISM	ENSMUSG00000002504.16	ENSMUST00000234121.2	1840	6	95	2596	95	-2117	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGATCCTGAGACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	24866705	24860860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24860947_24861164_24861345_24866500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010916	chr17	-	989	1	Genic_Genomic	ENSMUSG00000007021.6	novel	NA	NA	NA	NA	3747	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCCCCTGGACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	24905053	24904064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_24904100_24905100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010917	chr17	-	1068	3	FSM	ENSMUSG00000007021.6	ENST00000618464.1	1072	3	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATTGACCATCAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	24908795	24904079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_24904855_24906522_24906715_24908694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010918	chr17	-	1065	3	NNC	ENSMUSG00000007021.6	novel	1072	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCATTGACCATCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	24908795	24904080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_24904853_24906522_24906715_24908694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010919	chr17	-	925	2	NNC	ENSMUSG00000007021.6	novel	1072	3	NA	NA	2131	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGCATTGACCATCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	24906669	24904080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_24904859_24906522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010920	chr17	-	981	1	ISM	ENSMUSG00000040888.11	ENSMUST00000234859.2	1706	2	1536	0	1536	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24913144	24912163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24912200_24913100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010921	chr17	-	1765	3	NIC	ENSMUSG00000040888.11	novel	1776	3	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24915124	24912163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_24913412_24914227_24914425_24914804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010922	chr17	-	1764	3	FSM	ENSMUSG00000040888.11	ENST00000248114.7	605	3	-70	-1089	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24915116	24912163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_24913412_24914220_24914425_24914804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010923	chr17	-	1777	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24915131	24912163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_24913417_24914227_24914425_24914804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010924	chr17	-	1816	1	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	7896	0	6406	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTGGGCTACAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	24918738	24916922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24916900_24918700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010925	chr17	-	1979	3	ISM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	6468	1090	4978	-1090	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCCAGCAATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	24920166	24918012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_24919760_24919849_24920009_24920093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010926	chr17	+	782	4	ISM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	5	619	5	-618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCACAATTAACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24939041	24940281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010927	chr17	+	1094	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTGTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24939084	24940904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010928	chr17	-	733	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCTGGTGACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	24943452	24941032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010929	chr17	+	245	1	ISM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	5892	0	5852	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTTGTTGTCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	24961507	24961752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_24961500_24961800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010930	chr17	-	440	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	1033	0	1033	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTTTCTTTTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	25068305	25067865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_25067900_25068300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010931	chr17	-	1203	5	ISM	ENSMUSG00000039183.7	ENSMUST00000234597.2	1434	6	332	0	247	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25104556	25101585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010932	chr17	-	720	5	FSM	ENSMUSG00000039183.7	ENST00000565134.5	721	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCAGGAGCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	25104802	25102778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_25102890_25103064_25103210_25103374_25103530_25104392_25104592_25104692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010933	chr17	-	379	3	FSM	ENSMUSG00000039183.7	ENST00000568706.1	374	3	-5	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGAGTCTTAGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	25104808	25103101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_25103210_25103374_25103530_25104692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010934	chr17	-	722	2	ISM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	2143	0	2111	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGCATTTGTGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	25111918	25111125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25111658_25111728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010935	chr17	+	921	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	NA	NA	NA	NA	NA	NA	NA	25114086	25115263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_25114463_25114635_25114679_25114761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010936	chr17	+	909	2	NNC	ENSMUSG00000038880.14	novel	918	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	NA	NA	NA	NA	NA	NA	NA	25114089	25115263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_25114463_25114727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010937	chr17	+	898	2	NNC	ENSMUSG00000038880.14	novel	918	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	NA	NA	NA	NA	NA	NA	NA	25114093	25115263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_25114463_25114734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010938	chr17	+	895	2	NNC	ENSMUSG00000038880.14	novel	918	3	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	NA	NA	NA	NA	NA	NA	NA	25114099	25115263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_25114463_25114731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010939	chr17	+	876	2	NNC	ENSMUSG00000038880.14	novel	918	3	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	NA	NA	NA	NA	NA	NA	NA	25114103	25115263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_25114478_25114761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010940	chr17	+	317	3	FSM	ENSMUSG00000038880.14	ENST00000177742.7	688	3	226	145	226	-145	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCGCTGAACGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	25114366	25114916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_25114463_25114635_25114679_25114738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010941	chr17	+	325	1	NIC	ENSMUSG00000038880.14	novel	918	3	NA	NA	596	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCAGAGAGGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	25114736	25115061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_25114700_25115100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010942	chr17	+	730	4	FSM	ENSMUSG00000073435.11	ENST00000563498.1	586	4	56	-200	56	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGTTAAGACATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	25115535	25116505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_25115733_25115825_25115928_25116001_25116115_25116187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010943	chr17	-	364	1	Genic_Genomic	ENSMUSG00000024165.10	novel	NA	NA	NA	NA	17858	2	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCAATATTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	25161805	25161441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_25161400_25161800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010944	chr17	-	507	3	ISM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	11907	1896	11907	-1896	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGTTGTCATGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25167756	25163339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25163653_25164553_25164603_25167611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010945	chr17	-	343	3	ISM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	4521	3110	4521	-3110	internal_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTATTTCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	25175142	25164553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25164603_25167611_25167755_25174991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010946	chr17	-	385	3	ISM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	30	6167	30	-6167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGACTACATTCATATAG	NA	NA	NA	NA	NA	NA	NA	NA	25179633	25167610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25167755_25174991_25175141_25179541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010947	chr17	+	596	1	ISM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	2513	0	2513	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTATGTCTCTCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	25406040	25406636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25406000_25406600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010948	chr17	+	1155	4	FSM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	12	366	12	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACTCTGAAACTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	25448221	25451310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_25448441_25449180_25449384_25449494_25449603_25450685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010949	chr17	+	644	1	ISM	ENSMUSG00000015127.15	ENSMUST00000039734.12	4779	15	43668	1735	2829	6	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACATTCAGAGGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	25451038	25451682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25451000_25451700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010950	chr17	-	1280	1	Genic_Genomic	ENSMUSG00000035521.14	novel	NA	NA	NA	NA	5369	7	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATATCTAGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	25453577	25452297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_25452300_25453600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010951	chr17	-	1731	6	ISM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	4488	-818	4344	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACTGAAATCAGGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	25454602	25452472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010952	chr17	-	739	5	ISM	ENSMUSG00000035521.14	ENST00000204679.9	1204	11	4701	-3	4701	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATCCATACTGGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	25454245	25453170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010953	chr17	-	258	3	ISM	ENSMUSG00000035521.14	ENST00000683887.1	1143	11	4179	1080	4179	-1068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGACCCCTCTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	25454767	25454358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25454434_25454507_25454602_25454678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010954	chr17	-	1008	6	ISM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	3897	-6	-3617	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTTGCATTATCATC	NA	NA	NA	NA	NA	NA	NA	NA	25488460	25480888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010955	chr17	-	125	1	ISM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	11882	388	3441	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTCCGCCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	25481402	25481277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25481300_25481400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010956	chr17	-	170	2	ISM	ENSMUSG00000015120.16	ENSMUST00000172868.8	2755	4	447	2843	-37	-1002	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGTAAGGAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	25492394	25488383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25488454_25492294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010957	chr17	-	166	1	NIC	ENSMUSG00000024173.12	novel	1156	5	NA	NA	1605	3	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCACATCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	25562564	25562398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_25562400_25562600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010958	chr17	-	322	2	ISM	ENSMUSG00000024173.12	ENST00000211076.5	736	4	1374	0	1374	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCTGAGTCACATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25562795	25562401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25562558_25562629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010959	chr17	-	354	2	ISM	ENSMUSG00000024173.12	ENST00000211076.5	736	4	356	227	356	-227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTCCTGTCCCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	25563813	25562628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25562794_25563624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010960	chr17	-	338	2	ISM	ENSMUSG00000024173.12	ENST00000211076.5	736	4	11	1290	11	-1290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAGAGACCTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	25564158	25563691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_25563891_25564019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010961	chr17	+	929	4	ISM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	8	1683	8	-1683	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAAGGTGGGAGCGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	25690718	25693829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25691230_25692709_25692781_25693089_25693201_25693593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010962	chr17	+	584	4	ISM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	1997	823	1997	-823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGCTGTTTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25692707	25694689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25692781_25693089_25693201_25693593_25693837_25694532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010963	chr17	+	728	4	ISM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	2378	-1	2378	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTGGCACCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	25693088	25695513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25693201_25693593_25693837_25694532_25694688_25695295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010964	chr17	-	2990	3	FSM	ENSMUSG00000024176.11	ENSMUST00000025003.10	3000	3	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTTGAGTATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	25789649	25784864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_25787056_25787801_25788035_25789083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010965	chr17	+	1803	2	FSM	ENSMUSG00000091475.5	ENSMUST00000163493.4	1802	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCCCTTGAATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25789330	25794017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_25790076_25792959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010966	chr17	+	818	5	ISM	ENSMUSG00000002279.20	ENST00000262301.16	1416	8	22	10303	22	-10303	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGACGGCGGATGCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	25798181	25864239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010967	chr17	+	972	6	ISM	ENSMUSG00000002279.20	ENST00000262301.16	1416	8	6423	327	6423	-327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGCCAGGCGTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	25804582	25874215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010968	chr17	+	912	3	ISM	ENSMUSG00000041199.4	ENSMUST00000237785.2	1761	6	1184	308	693	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTCTGCCTGCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	25947874	25950124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25947903_25948041_25948144_25949342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010969	chr17	+	1063	1	ISM	ENSMUSG00000041199.4	ENSMUST00000237183.2	1743	6	2732	0	2194	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	25949375	25950438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25949400_25950400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010970	chr17	+	1382	5	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	6498	-645	6498	107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGGGCTCCATGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25999281	26001874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_25999411_25999853_25999935_26000223_26000353_26000661_26000820_26000989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010971	chr17	+	892	3	ISM	ENSMUSG00000002280.12	ENSMUST00000134108.8	2062	11	7465	180	7431	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTATGGCTAATCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	26000214	26001585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26000353_26000661_26000820_26000989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010972	chr17	+	876	1	Genic_Genomic	ENSMUSG00000002280.12	novel	NA	NA	NA	NA	8651	4	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTCAAATGACTGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	26001434	26002310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_26001400_26002300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010973	chr17	-	227	1	ISM	ENSMUSG00000061046.10	ENSMUST00000133071.8	1128	8	2567	0	2323	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCAGGTCTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	26001989	26001762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26001800_26002000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010974	chr17	-	145	2	ISM	ENSMUSG00000061046.10	ENSMUST00000150324.8	1267	8	1014	1274	1014	-1274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTACCCTTCCACCCGA	NA	NA	NA	NA	NA	NA	NA	NA	26003298	26003072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26003153_26003233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010975	chr17	-	143	2	ISM	ENSMUSG00000061046.10	ENSMUST00000150324.8	1267	8	608	1675	608	-1675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCGCTCTAACCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	26003704	26003473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26003547_26003634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010976	chr17	-	1272	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	50	-1	50	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTGTTCCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	26011722	26009473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010977	chr17	-	274	1	NIC	ENSMUSG00000118135.2	novel	757	4	NA	NA	4880	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	26009753	26009479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_26009500_26009800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010978	chr17	+	488	3	ISM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	912	2617	391	-2471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCACAACATCTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	26043512	26045087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26043661_26044627_26044806_26044925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010979	chr17	+	476	2	ISM	ENSMUSG00000025737.6	ENST00000647644.1	2684	9	2114	1437	2114	-1437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGGTAGATCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	26045235	26046121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26045599_26046008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010980	chr17	+	485	2	ISM	ENSMUSG00000025737.6	ENST00000647644.1	2684	9	4022	-146	4022	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTGTCACTTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	26047143	26047704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26047313_26047388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010981	chr17	+	173	1	NIC	ENSMUSG00000025737.6	novel	3099	9	NA	NA	4264	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCTTCCCTAAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	26047385	26047558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_26047400_26047600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010982	chr17	-	1147	6	FSM	ENSMUSG00000039615.10	ENSMUST00000236515.2	1701	6	701	-147	-286	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCATGGCTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	26051214	26049460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010983	chr17	-	400	1	NIC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	939	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTTGCCAGTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	26049989	26049589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_26049600_26050000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010984	chr17	-	287	3	ISM	ENSMUSG00000039615.10	ENST00000416154.2	564	5	321	211	321	-211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGGGCCCATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	26050607	26050075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26050193_26050282_26050340_26050494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010985	chr17	-	327	3	ISM	ENSMUSG00000039615.10	ENST00000416154.2	564	5	0	418	0	-418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGACCCCCGGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	26050928	26050282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26050340_26050494_26050606_26050769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010986	chr17	-	1125	4	ISM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	-1	1038	-1	-652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGTGCCCCTAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	26052336	26050516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26050606_26050769_26050936_26051019_26051219_26051665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010987	chr17	+	1242	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGGAATACCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	26094048	26096143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010988	chr17	+	1025	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGGAATACCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	26094475	26096143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010989	chr17	+	517	4	ISM	ENSMUSG00000025731.17	ENST00000614890.4	552	5	1	244	1	-244	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGATGTGGGGGTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	26094501	26095721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26094701_26094933_26095097_26095468_26095537_26095634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010990	chr17	+	527	5	FSM	ENSMUSG00000025731.17	ENST00000397666.6	544	5	17	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGCATCTCTGTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26094517	26095965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095634_26095714_26095923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010991	chr17	+	359	4	ISM	ENSMUSG00000025731.17	ENST00000614890.4	552	5	429	-3	426	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATCTCTGTCAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	26094929	26095968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26095097_26095468_26095537_26095634_26095714_26095923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010992	chr17	+	248	2	ISM	ENSMUSG00000025731.17	ENST00000397665.6	481	4	426	250	426	-250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGGGCGATGTGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	26094929	26095715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26095097_26095634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010993	chr17	-	1341	1	NIC	ENSMUSG00000025728.17	novel	3173	11	NA	NA	14133	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTCCTGCTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	26146735	26145394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_26145400_26146700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010994	chr17	-	1346	2	ISM	ENSMUSG00000025728.17	ENSMUST00000097368.10	3233	12	13084	44	13043	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCCTGATCCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	26147825	26145445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26146731_26147764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010995	chr17	-	177	2	ISM	ENSMUSG00000025728.17	ENSMUST00000140304.2	1835	4	5128	1006	5087	-1006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTCCTATACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	26155781	26153975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26154109_26155737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010996	chr17	-	190	1	Genic_Genomic	ENSMUSG00000036775.14	novel	NA	NA	NA	NA	8823	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTTGTGTTTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	26300371	26300181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_26300200_26300400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010997	chr17	-	867	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	139	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26314437	26310707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010998	chr17	+	1055	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	14	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGTCCTGTGAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	26342487	26345588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000010999	chr17	+	130	1	ISM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	2984	0	2940	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	26345457	26345587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26345500_26345600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011000	chr17	+	168	2	ISM	ENSMUSG00000024182.17	ENSMUST00000163421.8	2890	10	49150	6675	49150	-6622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGAAGAATGCCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	26407073	26407593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26407196_26407547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011001	chr17	+	158	2	ISM	ENSMUSG00000024182.17	ENSMUST00000163421.8	2890	10	55089	270	55089	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGATCATCGGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	26413012	26413998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26413081_26413908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011002	chr17	+	455	4	ISM	ENSMUSG00000024186.16	ENST00000316163.9	1209	13	4255	2225	4255	-2225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCACATCCTGGTGTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	26426523	26427278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26426634_26426732_26426849_26426965_26427054_26427137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011003	chr17	+	425	4	ISM	ENSMUSG00000024186.16	ENST00000316163.9	1209	13	4459	-4	4459	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTGGTGAGCCTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	26426727	26429507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26426849_26426965_26427054_26427137_26427277_26429430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011004	chr17	-	1427	1	Genic_Genomic	ENSMUSG00000024187.16	novel	NA	NA	NA	NA	30898	5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGAATCACTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26432217	26430790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_26430800_26432200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011005	chr17	-	1562	3	ISM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	29658	-298	29658	276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTCAGCCCTGCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26433457	26431388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_26432692_26432777_26432881_26433301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011006	chr17	+	1119	5	ISM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	14400	-1	14272	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26486269	26499694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011007	chr17	+	762	1	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	26935	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26498932	26499694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_26498900_26499700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011008	chr17	-	774	1	Genic_Genomic	ENSMUSG00000024190.8	novel	NA	NA	NA	NA	2110	1	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTGCTTTCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	26725336	26724562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_26724600_26725300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011009	chr17	-	1675	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	9	306	9	-305	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTTATTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	26727484	26724869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011010	chr17	+	559	5	ISM	ENSMUSG00000001576.16	ENST00000523291.5	586	6	46988	-1	7273	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGCCTTCTGTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	26827571	26850877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26850668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011011	chr17	+	1943	4	ISM	ENSMUSG00000001576.16	ENSMUST00000163213.8	1009	8	14554	-1567	14554	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGGACGGGAACTATGT	NA	NA	NA	NA	NA	NA	NA	NA	26854976	26875715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_26855021_26857716_26857818_26860555_26860679_26874040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011012	chr17	+	1717	1	Genic_Genomic	ENSMUSG00000001576.16	novel	NA	NA	NA	NA	33771	5	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTGACTCTGCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	26874193	26875910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_26874200_26875900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011013	chr17	+	824	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26895342	26918621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011014	chr17	+	809	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26895350	26918621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_26895553_26901651_26901700_26914328_26914459_26918192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011015	chr17	+	795	3	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26895364	26918621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_26895553_26914287_26914459_26918185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011016	chr17	+	157	1	NIC	ENSMUSG00000015575.16	novel	494	4	NA	NA	22798	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCCTCTGAGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26918183	26918340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_26918200_26918300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011017	chr17	-	1512	2	FSM	ENSMUSG00000015579.6	ENSMUST00000015723.5	1525	2	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGGCTTCTTTTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	27060526	27057637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_27058622_27059998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011018	chr17	+	1026	5	ISM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	3018	0	2894	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTAGGCATGAGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	27155327	27156862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27155366_27155485_27155655_27155710_27155840_27156027_27156109_27156253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011019	chr17	+	615	1	NIC	ENSMUSG00000024193.9	novel	2522	15	NA	NA	3815	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTAGGCATGAGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	27156248	27156863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_27156200_27156900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011020	chr17	-	738	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	NA	NA	NA	NA	NA	NA	NA	NA	27158540	27156945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011021	chr17	-	243	4	FSM	ENSMUSG00000024194.17	ENST00000488478.5	370	4	130	-3	130	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGTACCTGCACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	27157937	27157093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_27157151_27157545_27157592_27157700_27157761_27157857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011022	chr17	+	418	3	ISM	ENSMUSG00000067629.14	ENST00000628646.2	4082	19	-157	21182	42	-21182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCAGTGGAGGGGCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	27160268	27165678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27160493_27163606_27163729_27165606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011023	chr17	+	445	4	ISM	ENSMUSG00000067629.14	ENST00000628646.2	4082	19	3179	14734	3179	-14734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTACTGGACCTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	27163604	27172126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27163729_27165606_27165713_27171535_27171628_27172003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011024	chr17	+	471	4	ISM	ENSMUSG00000067629.14	ENST00000645250.1	4029	18	242	15487	242	-12512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGGGAAGAAGGGAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	27171534	27174348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27171628_27172003_27172126_27173901_27174056_27174246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011025	chr17	+	945	4	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	199	13514	199	-10279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCACTGTGGCCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	27172058	27176581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27172126_27173901_27174056_27174246_27174346_27175956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011026	chr17	+	847	3	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	2416	13236	2416	-10001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTCTTCCTGAACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	27174275	27176859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27174346_27175956_27176581_27176706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011027	chr17	+	839	3	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	4172	12900	4172	-9665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACTGGGAACGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	27176031	27177195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27176581_27176706_27176852_27177050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011028	chr17	+	531	3	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	4845	11274	4845	-8039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAAACTTCAGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	27176704	27178821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27176852_27177050_27177196_27178582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011029	chr17	+	589	3	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	5187	10987	5187	-7752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGAGGTCCCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	27177046	27179108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27177196_27178582_27178820_27178905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011030	chr17	+	558	3	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	6783	10600	6783	-7365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCACCCTGCTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	27178642	27179495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27178820_27178905_27179108_27179316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011031	chr17	+	390	2	NNC	ENSMUSG00000067629.14	novel	4256	15	NA	NA	7041	-7365	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCACCCTGCTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	27178900	27179495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_27179112_27179316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011032	chr17	+	519	2	ISM	ENSMUSG00000067629.14	ENST00000449372.7	3919	18	18898	8807	7456	-6112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGAGTGGCTCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	27179315	27180748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27179496_27180409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011033	chr17	+	942	3	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	7464	8958	7464	-5723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGCTTCAGGACAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	27179323	27181137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27179496_27180042_27180085_27180409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011034	chr17	+	1460	3	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	8544	6078	8544	-2843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGCCCGGGGAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	27180403	27184017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27181473_27181887_27182062_27183800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011035	chr17	+	380	2	ISM	ENSMUSG00000067629.14	ENST00000449372.7	3919	18	21467	5546	10025	-2851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGAGGGGCGGCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	27181884	27184009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27182062_27183806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011036	chr17	+	898	4	ISM	ENSMUSG00000067629.14	ENSMUST00000231853.2	4256	15	10050	180	10050	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCCCCTGAGCACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	27181909	27189915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27182062_27183800_27184013_27185856_27185948_27189472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011037	chr17	+	1254	4	ISM	ENSMUSG00000067629.14	ENST00000645250.1	4029	18	12511	-624	11944	364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCCTCTACCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	27183803	27190459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27184013_27185856_27185948_27189472_27189649_27189681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011038	chr17	+	1236	1	ISM	ENSMUSG00000067629.14	ENST00000646630.1	5981	20	29949	0	18313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGGCTGACTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	27190172	27191408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27190200_27191400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011039	chr17	+	2798	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGGCTTGAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	27192140	27195179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_27192289_27192529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011040	chr17	-	480	1	Genic_Genomic	ENSMUSG00000117799.2	novel	NA	NA	NA	NA	2661	2	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGGTGTGGTGACACGT	NA	NA	NA	NA	NA	NA	NA	NA	27267727	27267247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_27267200_27267700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011041	chr17	-	500	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	2	-2	2	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGAACTCATTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	27352888	27341634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011042	chr17	-	396	4	NNC	ENSMUSG00000024208.17	novel	500	4	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTGGAACTCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	27352793	27341636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_27341815_27344120_27344191_27344857_27344926_27352713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011043	chr17	-	176	1	NIC	ENSMUSG00000024208.17	novel	500	4	NA	NA	10786	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTTTGGAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	27341817	27341641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_27341600_27341800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011044	chr17	-	207	2	ISM	ENSMUSG00000024210.4	ENSMUST00000025046.4	2342	6	19212	1264	19212	-1264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCATGATGGAACCCGC	NA	NA	NA	NA	NA	NA	NA	NA	27367557	27364202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27364297_27367444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011045	chr17	-	997	3	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	41778	0	41778	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGCCATGGTGGGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	27654040	27645591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27645808_27650305_27650553_27653506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011046	chr17	-	849	3	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	37991	8331	37991	-8331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTACCGCATCTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	27657827	27653922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27654443_27657269_27657407_27657635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011047	chr17	-	554	2	NNC	ENSMUSG00000063239.18	novel	2976	9	NA	NA	38446	-8396	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCGCATCTTCCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	27657372	27653987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_27654439_27657269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011048	chr17	-	553	4	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	22288	12058	22288	-12058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAACTTCTCAGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	27673530	27657649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27657837_27669098_27669240_27670878_27671034_27673460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011049	chr17	-	537	4	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	3721	23618	3721	-23618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAACAACAGGCGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	27692097	27669209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27669240_27670878_27671034_27673460_27673597_27691881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011050	chr17	+	364	3	ISM	ENSMUSG00000046711.17	ENSMUST00000231866.2	584	5	-47	1646	0	-1584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCCGCCAAGACCCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	27775558	27779967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27775686_27778506_27778678_27779901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011051	chr17	+	1554	5	FSM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	98	246	71	-246	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACTCGAGGGGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	27775739	27782391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011052	chr17	+	334	2	ISM	ENSMUSG00000046711.17	ENSMUST00000118599.9	1045	6	407	3143	209	-2874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGTCTAAAGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	27775877	27778677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27776041_27778506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011053	chr17	+	344	4	ISM	ENSMUSG00000046711.17	ENSMUST00000232013.2	805	5	3025	259	2912	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCCCTGCTCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	27778580	27781523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27778678_27779901_27779986_27780434_27780486_27781411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011054	chr17	+	1283	2	ISM	ENSMUSG00000046711.17	ENSMUST00000117600.9	1595	5	4807	-1	4765	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGTGTAAGGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	27780433	27782645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27780486_27781414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011055	chr17	+	1233	1	ISM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	5866	2	5745	2	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGTGTAAGGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	27781413	27782646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_27781400_27782600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011056	chr17	-	323	1	Genic_Genomic	ENSMUSG00000062753.15	novel	NA	NA	NA	NA	1776	5	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGGAGGTGGCCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	27782864	27782541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_27782500_27782900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011057	chr17	-	632	3	NNC	ENSMUSG00000062753.15	novel	862	5	NA	NA	914	61	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTTACTGTGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	27783726	27782681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_27782991_27783122_27783229_27783509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011058	chr17	-	2214	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTGTTCCATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	27842460	27798355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011059	chr17	-	865	1	ISM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	43244	5	16964	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCTCTTTGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	27799225	27798360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27798400_27799200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011060	chr17	-	549	5	FSM	ENSMUSG00000052146.17	ENSMUST00000178774.3	498	5	-1	-50	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATGTTCTGTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	27853450	27849388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011061	chr17	-	596	5	ISM	ENSMUSG00000052146.17	ENST00000644393.1	623	6	765	-10	-1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCACTTGTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	27853450	27849397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27849537_27850173_27850230_27851252_27851331_27853045_27853218_27853299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011062	chr17	-	731	4	ISM	ENSMUSG00000052146.17	ENSMUST00000155071.9	712	5	-317	1321	0	-1321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGTGCCCCGTGAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	27854519	27851263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_27851331_27853045_27853218_27853299_27853450_27854177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011063	chr17	+	308	2	ISM	ENSMUSG00000024217.11	ENSMUST00000232873.2	984	7	0	11797	0	-11792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGCCCTGGGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	28057123	28059145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28057234_28058947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011064	chr17	+	418	4	ISM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	-113	6713	-113	-6711	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTCCCCCCAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	28058947	28064226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011065	chr17	+	347	4	ISM	ENSMUSG00000024217.11	ENSMUST00000233657.2	882	6	309	3906	309	-3906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCGGAACGTGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	28059437	28067031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28059481_28061243_28061353_28064156_28064247_28066926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011066	chr17	+	473	3	ISM	ENSMUSG00000024217.11	ENSMUST00000233657.2	882	6	5028	48	5028	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACTTATATTGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	28064156	28070889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28064247_28066926_28067032_28070611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011067	chr17	-	431	1	ISM	ENSMUSG00000024218.14	ENSMUST00000114848.8	2207	6	7690	0	6104	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTCTCTGTGTTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	28120526	28120095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_28120100_28120500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011068	chr17	-	465	2	ISM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	5099	295	5031	237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGGAGATGGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	28121599	28120396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_28120764_28121501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011069	chr17	-	775	4	FSM	ENSMUSG00000024218.14	ENST00000420584.3	523	4	-250	-2	-182	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGGGAGACTGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	28126880	28120631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_28120764_28122074_28122163_28124235_28124385_28126474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011070	chr17	-	820	2	ISM	ENSMUSG00000024218.14	ENSMUST00000114848.8	2207	6	20	6744	20	-6206	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTCACATTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	28128196	28126839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_28127218_28127754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011071	chr17	-	460	1	FSM	ENSMUSG00000085521.5	ENSMUST00000134228.3	950	1	825	-335	825	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAGGAAGGGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	28294504	28294044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_28294000_28294500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011072	chr17	+	126	2	ISM	ENSMUSG00000024220.15	ENSMUST00000233613.2	2491	14	8777	10696	8777	-10694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCAGCATGGCCTACATAC	NA	NA	NA	NA	NA	NA	NA	NA	28413937	28414164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28414021_28414121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011073	chr17	+	188	2	ISM	ENSMUSG00000024220.15	ENSMUST00000233613.2	2491	14	16045	3381	16045	-3379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGTGCCATCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	28421205	28421479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28421323_28421408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011074	chr17	+	172	2	ISM	ENSMUSG00000024220.15	ENSMUST00000233613.2	2491	14	16328	2713	16328	-2711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATCATGAAGAACTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	28421488	28422147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28421573_28422059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011075	chr17	+	139	1	ISM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	28619	0	19561	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	28424721	28424860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28424700_28424900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011076	chr17	+	216	2	ISM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	213	10852	213	-10852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATGTGTCCTCTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	28532758	28534690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28532857_28534572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011077	chr17	+	182	2	ISM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	3576	8995	3576	-8995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTCTGTGCTGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	28536121	28536547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28536198_28536441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011078	chr17	+	265	2	ISM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	3894	8417	3894	-8417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGTGCGTGCAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	28536439	28537125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28536586_28537006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011079	chr17	+	149	2	ISM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	4516	8160	4516	-8160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGCAGACTTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	28537061	28537382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28537131_28537302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011080	chr17	+	150	2	ISM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	4755	5710	4755	-5710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGCTCCCTTGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	28537300	28539832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28537382_28539763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011081	chr17	+	181	2	ISM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	9226	267	9173	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGAGTCAGCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	28541718	28545279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28541746_28545125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011082	chr17	+	159	1	ISM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	12895	0	12842	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28545387	28545546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28545400_28545500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011083	chr17	+	831	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGCCTGTGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	28547444	28550008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011084	chr17	+	821	6	FSM	ENSMUSG00000037805.16	ENSMUST00000233427.2	729	6	-91	-1	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28547450	28550007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_28547593_28547787_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011085	chr17	+	807	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28547471	28550007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549676_28549803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011086	chr17	+	791	6	NNC	ENSMUSG00000037805.16	novel	830	6	NA	NA	34	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	28547478	28550007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_28547593_28547784_28547860_28547940_28548017_28548347_28548497_28549498_28549672_28549803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011087	chr17	-	628	1	Genic_Genomic	ENSMUSG00000002249.22	novel	NA	NA	NA	NA	18049	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGTTGACACATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	28551271	28550643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_28550600_28551300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011088	chr17	-	1020	1	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	34042	0	33784	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28807641	28806621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_28806600_28807600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011089	chr17	-	1125	3	ISM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	30424	1630	30166	-1630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCTCGAACTCAGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	28811259	28808251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_28809216_28810174_28810268_28811191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011090	chr17	+	354	3	ISM	ENSMUSG00000004864.14	ENST00000373766.9	1001	10	6967	251	6967	-251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGATGTTCCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	28995292	28997227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28995391_28996696_28996776_28997050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011091	chr17	+	258	2	ISM	ENSMUSG00000004864.14	ENST00000373766.9	1001	10	8728	-7	8728	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGGCCTCCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	28997053	28997485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_28997228_28997401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011092	chr17	+	595	5	ISM	ENSMUSG00000043286.13	ENST00000636260.2	706	6	-1	5993	-1	-5993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTCCCGAGGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29095792	29099941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29096019_29096360_29096427_29097339_29097550_29098409_29098471_29099909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011093	chr17	+	1705	2	ISM	ENSMUSG00000005936.20	ENSMUST00000168507.2	2400	8	11758	-308	11758	308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTCTCCATGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	29183947	29187219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29184059_29185625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011094	chr17	+	1725	1	ISM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	15567	0	14609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29186798	29188523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29186800_29188500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011095	chr17	-	1290	1	Genic_Genomic	ENSMUSG00000024006.18	novel	NA	NA	NA	NA	28523	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGATTTCTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	29191142	29189852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_29189900_29191100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011096	chr17	-	1456	3	ISM	ENSMUSG00000024006.18	ENSMUST00000232836.2	2778	13	26312	-304	26312	304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTCGCTGTGTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29193353	29190387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_29191651_29192018_29192114_29193255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011097	chr17	+	544	5	ISM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	23	2141	23	-2141	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTCTGTCTCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29251624	29260206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011098	chr17	+	948	5	ISM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	3668	1456	3668	-1456	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGATGCAGAGCTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	29255269	29260891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011099	chr17	+	532	2	NNC	ENSMUSG00000071172.14	novel	2618	6	NA	NA	8599	-1521	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAACAGATAAGGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	29260200	29260826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_29260264_29260357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011100	chr17	+	557	1	Genic_Genomic	ENSMUSG00000071172.14	novel	NA	NA	NA	NA	10190	1	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAGTATATTTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	29261791	29262348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_29261800_29262300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011101	chr17	+	1168	3	FSM	ENSMUSG00000117007.2	ENSMUST00000233185.2	1247	3	79	0	79	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCAGACTGGTAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	29272388	29278729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_29272589_29275356_29275414_29277818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011102	chr17	+	487	2	ISM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	13	928	13	-804	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCCCCGGGTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	29309965	29317747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29310076_29317370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011103	chr17	+	248	2	ISM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	1	2170	1	-1025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGACTTCGTCACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	29312743	29317526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29312836_29317370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011104	chr17	+	2078	3	FSM	ENSMUSG00000023067.15	ENSMUST00000233296.2	2080	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTCATTAGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	29312756	29319701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_29313016_29317376_29317812_29318317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011105	chr17	+	989	2	FSM	ENSMUSG00000023067.15	ENSMUST00000122348.3	1172	2	212	-29	212	29	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAATTAGTAGGACGGTA	NA	NA	NA	NA	NA	NA	NA	NA	29317085	29318580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_29317812_29318317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011106	chr17	-	166	2	Antisense	novelGene_ENSMUSG00000023067.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCGGGCCCACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	29318453	29317776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr17_-_29317805_29318315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011107	chr17	+	363	1	NIC	ENSMUSG00000023067.15	novel	1913	3	NA	NA	1440	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATACCGGAGGAACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	29318313	29318676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_29318300_29318700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011108	chr17	+	206	1	ISM	ENSMUSG00000023067.15	ENSMUST00000233296.2	2080	3	6741	0	2622	0	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTCATTAGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	29319495	29319701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29319500_29319700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011109	chr17	-	499	1	FSM	ENSMUSG00000067575.6	ENSMUST00000147311.2	333	1	-61	-105	-61	105	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGTTTCTCAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	29356339	29355840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_29355800_29356300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011110	chr17	-	501	1	ISM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	12883	0	12883	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGGCCTTTTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29470277	29469776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_29469800_29470300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011111	chr17	-	966	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	38	458	38	-458	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTCGCTCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	29483122	29470234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011112	chr17	-	1102	7	ISM	ENSMUSG00000024012.19	ENSMUST00000235088.2	1660	12	7508	0	3025	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	29558817	29551049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011113	chr17	-	192	2	ISM	ENSMUSG00000024012.19	ENSMUST00000234507.2	1653	12	10982	1883	6557	-1240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGTTCTGCCTATGACC	NA	NA	NA	NA	NA	NA	NA	NA	29555285	29552932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_29552980_29555140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011114	chr17	-	171	2	ISM	ENSMUSG00000024012.19	ENST00000405630.1	746	11	1970	7717	1970	-7717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTGAAGGAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29559872	29559409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_29559473_29559764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011115	chr17	-	247	2	ISM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	306	10747	-277	-10104	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCACAGGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29566602	29561796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_29561882_29566440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011116	chr17	+	480	1	ISM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	4879	1	2225	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTTTCCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	29714605	29715085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29714600_29715100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011117	chr17	-	1013	2	FSM	ENSMUSG00000079580.10	ENST00000652218.1	1007	2	-5	-1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACACGCTCTACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	29745735	29738335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_29738793_29745179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011118	chr17	-	799	2	FSM	ENSMUSG00000079580.10	ENST00000652639.1	797	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGGGCCTCATGAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	29769073	29745463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_29745731_29768541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011119	chr17	-	801	2	NIC	ENSMUSG00000079580.10	novel	797	2	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAGGGCCTCATGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	29769073	29745464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_29745734_29768541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011120	chr17	+	303	2	ISM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	6799	18232	6725	11210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGAGGGCTCCTCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	29840562	29845733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29840612_29845479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011121	chr17	+	307	2	ISM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	12216	15969	12142	13473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATAATCTCTACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	29845979	29847996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29846224_29847933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011122	chr17	+	282	2	ISM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	19902	8969	19828	-8969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCTCTGAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	29853665	29854996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29853743_29854791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011123	chr17	+	322	2	ISM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	21124	3563	21050	-3563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCTCGGACTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	29854887	29860402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29854997_29860189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011124	chr17	+	257	1	ISM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	29945	0	29871	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGCTCCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	29863708	29863965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29863700_29864000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011125	chr17	-	829	1	ISM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	12884	0	12849	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTGTAAGACACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	29923134	29922305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_29922300_29923100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011126	chr17	-	841	2	ISM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	11716	355	11681	-355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGAGGCGGCTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	29924302	29922660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_29923444_29924244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011127	chr17	+	893	1	ISM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	44492	0	44492	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTCTCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	29924060	29924953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_29924100_29925000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011128	chr17	+	1082	1	ISM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	204206	2	203875	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTGTCTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30427912	30428994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_30427900_30429000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011129	chr17	-	1876	1	ISM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	359089	0	354431	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGTTTGTGCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	30436373	30434497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_30434500_30436400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011130	chr17	-	1901	2	ISM	ENSMUSG00000062202.15	ENSMUST00000237048.2	1944	11	342975	-1607	342959	1314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTGGTGTCTACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	30447845	30437715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_30439545_30447773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011131	chr17	-	205	1	ISM	ENSMUSG00000062202.15	ENSMUST00000236584.2	1535	7	211456	0	207077	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAACTTTGACCAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	30583727	30583522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_30583500_30583700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011132	chr17	-	924	1	ISM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	26800	0	26743	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGTAAGCTGTGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	30804833	30803909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_30803900_30804800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011133	chr17	-	1186	4	ISM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	12480	474	12423	-474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTACCTCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30819153	30812313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011134	chr17	+	194	2	ISM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	47849	11840	47809	-11840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTACCACAACCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	31324509	31325122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31324615_31325033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011135	chr17	+	159	2	ISM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	48429	9583	48389	-9583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGACACCGATGTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	31325089	31327379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31325149_31327279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011136	chr17	+	238	2	ISM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	50618	9286	50578	-9286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGCGGGACTCGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	31327278	31327676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31327429_31327588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011137	chr17	+	172	2	ISM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	50988	8376	50948	-8376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCATGTTTGCTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31327648	31328586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31327691_31328456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011138	chr17	+	167	2	ISM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	51834	6996	51794	-6996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTACTGGTACAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	31328494	31329966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31328626_31329930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011139	chr17	+	172	2	ISM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	53294	6673	53254	-6673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACATCGCTGGTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	31329954	31330289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31330032_31330194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011140	chr17	+	164	2	ISM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	53570	5019	53530	-5019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTCCGGATTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31330230	31331943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31330354_31331902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011141	chr17	+	239	3	ISM	ENSMUSG00000041119.13	ENSMUST00000237363.2	1660	16	10699	22679	10699	-22676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATAGATTTCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	31662807	31672454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31662883_31667340_31667426_31672375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011142	chr17	+	272	3	ISM	ENSMUSG00000041119.13	ENSMUST00000237363.2	1660	16	21915	16153	21915	-16150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGACAGCCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	31674023	31678980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31674103_31678048_31678136_31678874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011143	chr17	+	377	4	ISM	ENSMUSG00000041119.13	ENSMUST00000136384.9	1887	16	26002	14640	25938	-14486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTGCAACATCTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	31678046	31680644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31678136_31678874_31678980_31679152_31679236_31680544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011144	chr17	+	347	3	ISM	ENSMUSG00000041119.13	ENSMUST00000136384.9	1887	16	27115	9842	27051	-9688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTGTGTCTTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	31679159	31685442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31679236_31680544_31680702_31685328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011145	chr17	+	324	3	ISM	ENSMUSG00000041119.13	ENSMUST00000237363.2	1660	16	33244	5350	33244	-5347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGATCATGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	31685352	31689783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31685443_31688767_31688873_31689654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011146	chr17	+	271	3	ISM	ENSMUSG00000041119.13	ENSMUST00000237363.2	1660	16	36718	4305	36718	-4302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGCAGTGCAGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	31688826	31690828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31688873_31689654_31689784_31690732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011147	chr17	+	312	3	ISM	ENSMUSG00000041119.13	ENSMUST00000237363.2	1660	16	37541	2920	37541	-2917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCTCCTCCAAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	31689649	31692213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31689784_31690732_31690829_31692131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011148	chr17	+	319	2	ISM	ENSMUSG00000041119.13	ENST00000398224.3	1672	17	86869	0	40021	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31692129	31695133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31692214_31694898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011149	chr17	+	238	1	NIC	ENSMUSG00000041119.13	novel	2089	19	NA	NA	42788	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTATTTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31694896	31695134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_31694900_31695100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011150	chr17	-	776	1	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	17654	0	14780	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31714071	31713295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_31713300_31714100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011151	chr17	-	793	2	ISM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	14180	1888	11306	602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGTTGCTCTGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	31717545	31715183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_31715903_31717471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011152	chr17	+	504	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	-7	-4	-7	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTATTTCCCCTCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	31739081	31750309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_31739236_31740542_31740667_31750083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011153	chr17	+	472	3	NNC	ENSMUSG00000024038.18	novel	493	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31739099	31750305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_31739236_31740542_31740657_31750083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011154	chr17	+	466	3	NNC	ENSMUSG00000024038.18	novel	493	3	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31739107	31750305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_31739236_31740542_31740667_31750091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011155	chr17	+	1043	3	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	22	3225	22	861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGAAGGGAGCTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	31739113	31747080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31739236_31740542_31740667_31746283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011156	chr17	+	574	2	ISM	ENSMUSG00000024038.18	ENSMUST00000191598.3	645	3	1382	-4	1382	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGCTTTGAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	31740540	31746223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31740667_31745775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011157	chr17	+	449	1	Genic_Genomic	ENSMUSG00000024038.18	novel	NA	NA	NA	NA	6616	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGCTTTGAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	31745774	31746223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_31745800_31746200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011158	chr17	+	1089	2	ISM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	7417	0	7350	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	31746508	31750305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31747376_31750083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011159	chr17	+	355	1	ISM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	42605	0	15611	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGATTCTGTAAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	31826312	31826667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_31826300_31826700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011160	chr17	-	330	2	ISM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	10712	0	10712	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	31867031	31866054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_31866330_31866976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011161	chr17	+	2000	2	ISM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	23171	585	23171	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAAATTGCTCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	32278244	32281254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_32278312_32279321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011162	chr17	+	1955	1	ISM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	24811	0	24811	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTGATGTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32279884	32281839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_32279900_32281800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011163	chr17	-	428	1	ISM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	17086	0	17086	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCATTAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	32523073	32522645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32522600_32523100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011164	chr17	-	578	3	ISM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	11709	1611	11709	-1611	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAAAGATATTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	32528450	32524256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32524681_32525463_32525560_32528392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011165	chr17	-	413	2	ISM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	4716	11983	4716	-11983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTCTGGGATCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	32535443	32534628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32534759_32535160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011166	chr17	-	406	3	ISM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	3306	12904	3306	-12904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGACTTGGGAACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	32536853	32535549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32535642_32536040_32536321_32536819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011167	chr17	-	200	1	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	8851	0	8851	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTACTGTGGCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	32573054	32572854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32572900_32573100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011168	chr17	-	351	2	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	6316	1145	6316	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACAGCATTCCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	32575589	32573999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32574158_32575396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011169	chr17	-	302	2	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	5856	2623	5856	-1480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTCCCCTCCCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	32576049	32575477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32575593_32575862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011170	chr17	-	303	2	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	5298	3302	5298	-2159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGAGTGAGTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	32576607	32576156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32576283_32576430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011171	chr17	-	389	2	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	3784	3920	3784	-2777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCATCAAAAAAGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32578121	32576774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32576959_32577916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011172	chr17	-	269	2	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	1348	5468	1348	-4325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTCGGGAGATCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32580557	32578322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32578469_32580434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011173	chr17	-	278	2	ISM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	46	7899	46	-6756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCTAGCCTGACCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	32581859	32580753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32580939_32581766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011174	chr17	-	155	1	NIC	ENSMUSG00000052142.16	novel	3681	17	NA	NA	11154	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTGCCCTTCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	32611173	32611018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_32611000_32611200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011175	chr17	-	193	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	9715	667	9715	-667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGCGCAGCTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	32612612	32611685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32611763_32612496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011176	chr17	-	155	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	9522	1533	9522	-1533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTGTCTGTACCAATG	NA	NA	NA	NA	NA	NA	NA	NA	32612805	32612551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32612616_32612714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011177	chr17	-	145	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	9225	1844	9225	-1844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAGCCATGCAACACT	NA	NA	NA	NA	NA	NA	NA	NA	32613102	32612862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32612917_32613011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011178	chr17	-	212	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	8165	2132	8165	-2132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTCCTGAGGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	32614162	32613150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32613249_32614048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011179	chr17	-	174	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	7450	3083	7450	-3083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGCGAGACAGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	32614877	32614101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32614194_32614795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011180	chr17	-	139	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	6954	3835	6954	-3835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCATTGATGAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	32615373	32614853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32614941_32615321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011181	chr17	-	160	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	5982	4742	5982	-4742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGGCGCGCTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	32616345	32615760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32615859_32616283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011182	chr17	-	138	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	5260	5511	5260	-5511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGACGTGAGAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	32617067	32616529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32616595_32616994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011183	chr17	-	136	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	4372	5976	4372	-5976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTCTCTGGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	32617955	32616994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32617066_32617890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011184	chr17	-	199	2	ISM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	218	7260	218	-7260	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGTGAGGAGGAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	32622109	32618278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_32618398_32622029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011185	chr17	-	341	2	ISM	ENSMUSG00000024055.16	ENSMUST00000139353.8	1389	10	16717	5203	16717	-5203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTAAGACCAAAACTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	33149636	33148877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33149097_33149514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011186	chr17	+	1424	1	ISM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	11996	0	11996	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTTGGCTGGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	33196783	33198207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_33196800_33198200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011187	chr17	+	815	2	FSM	ENSMUSG00000094891.3	ENST00000641419.1	908	2	94	-1	94	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAATTAAAATAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	33395516	33406448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_33396312_33406428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011188	chr17	+	806	1	FSM	ENSMUSG00000094891.3	ENSMUST00000112168.4	948	1	145	-3	112	3	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATAAGAAAATTCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	33395534	33396340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_33395500_33396300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011189	chr17	-	2892	1	ISM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	12536	0	12536	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	33461583	33458691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33458700_33461600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011190	chr17	-	2909	2	ISM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	11372	385	11372	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAATTCTTTGAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	33462747	33459076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33461925_33462686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011191	chr17	+	1164	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGAGTGCTCTTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	33848096	33850753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011192	chr17	-	1281	3	ISM	ENSMUSG00000059208.16	ENSMUST00000087582.13	2370	17	35020	-3	34989	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	33869373	33865209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33865634_33867786_33867839_33868568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011193	chr17	-	911	3	ISM	ENSMUSG00000059208.16	ENSMUST00000139302.8	2428	17	33061	2576	33061	-2573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTGTAACAGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	33871301	33867785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33867839_33868568_33869372_33871246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011194	chr17	-	937	3	ISM	ENSMUSG00000059208.16	ENSMUST00000139302.8	2428	17	26921	3359	26921	-3356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTTCTTTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	33877441	33868568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33869372_33871246_33871301_33877361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011195	chr17	-	162	1	Genic_Genomic	ENSMUSG00000079557.12	novel	NA	NA	NA	NA	26965	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTCTAAGCTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	33910649	33910487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_33910500_33910600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011196	chr17	-	943	3	ISM	ENSMUSG00000079557.12	ENST00000381035.8	1192	4	8822	0	8764	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGCTAATATGGACGC	NA	NA	NA	NA	NA	NA	NA	NA	33928850	33910512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33911128_33921986_33922183_33928718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011197	chr17	-	277	2	ISM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	22501	495	22471	-471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCCCTGTGTGAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	33915143	33910983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33911128_33915010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011198	chr17	-	224	2	ISM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	15602	1849	15585	-1849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACCATCTATGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	33922029	33915039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33915221_33921986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011199	chr17	-	209	2	ISM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	-2	15661	-2	-15661	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCGAGCAGCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	33937633	33928851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33928947_33937519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011200	chr17	-	983	1	Genic_Genomic	ENSMUSG00000077450.14	novel	NA	NA	NA	NA	16826	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATGATGCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	33962438	33961455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_33961500_33962400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011201	chr17	-	914	1	ISM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	12867	4266	12627	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTGGTTTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	33966637	33965723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33965700_33966600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011202	chr17	-	1180	3	ISM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	11307	98	11291	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCATCCCCACTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33967973	33965821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33966788_33967483_33967565_33967840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011203	chr17	-	181	2	ISM	ENSMUSG00000077450.14	ENST00000601897.1	347	3	4	438	4	-438	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGCTGGTGGGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	33979260	33967917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33968035_33979196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011204	chr17	+	687	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	239	-1	239	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGATTTCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	33979204	33980845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_33979562_33980515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011205	chr17	+	321	1	Genic_Genomic	ENSMUSG00000090952.3	novel	NA	NA	NA	NA	1559	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGATTTCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	33980524	33980845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_33980500_33980800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011206	chr17	-	1618	1	ISM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	6463	0	6463	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTTTGATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33994341	33992723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33992700_33994300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011207	chr17	-	1891	2	ISM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	4597	212	4597	-212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAACCTGGGCTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	33996207	33992935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_33994543_33995923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011208	chr17	+	333	2	ISM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	11763	0	11763	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	34041259	34041891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34041350_34041648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011209	chr17	-	392	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	34043536	34042009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011210	chr17	-	392	4	NNC	ENSMUSG00000067288.14	novel	392	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCCAGCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	34043532	34042009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_34042091_34042170_34042305_34043268_34043321_34043407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011211	chr17	-	306	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	82	-6	-4	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGAAATTGGTTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	34043454	34042017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011212	chr17	-	214	3	NNC	ENSMUSG00000067288.14	novel	437	4	NA	NA	6	-140	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCAACCCTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34043444	34042165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_34042305_34043282_34043321_34043407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011213	chr17	+	532	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTTCTTAGTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	34043542	34057292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011214	chr17	+	521	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTCTTAGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	34043545	34057291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_34043655_34044574_34044625_34048647_34048791_34057072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011215	chr17	+	530	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTCTTAGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	34043547	34057291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_34043659_34044574_34044625_34048640_34048791_34057072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011216	chr17	+	500	3	ISM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	10	2097	10	-1074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGCCACCCAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	34062074	34066651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34062266_34064989_34065116_34066468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011217	chr17	+	517	3	ISM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	2593	572	2593	-572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATAGGCTTTCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	34064992	34067153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34065116_34066468_34066700_34066990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011218	chr17	+	690	3	ISM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	4070	168	4070	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGGTCCTCAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	34066469	34067557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34066700_34066990_34067153_34067259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011219	chr17	+	457	1	Genic_Genomic	ENSMUSG00000002308.17	novel	NA	NA	NA	NA	5896	4	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGGAAACAGAATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34068295	34068752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_34068300_34068800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011220	chr17	-	990	2	ISM	ENSMUSG00000079553.12	ENST00000428849.7	2181	11	5741	7382	5740	-7382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCGAGTGTGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	34103867	34102167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34102853_34103562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011221	chr17	+	1074	4	FSM	ENSMUSG00000024308.16	ENST00000489157.5	1063	4	-8	-3	-8	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTGGGGAACATCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	34138550	34145328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_34138699_34138844_34139025_34144383_34144783_34144981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011222	chr17	+	979	4	NNC	ENSMUSG00000024308.16	novel	1063	4	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCTGGGGAACATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34138637	34145327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_34138699_34138844_34139025_34144383_34144776_34144981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011223	chr17	+	256	2	ISM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	268	8933	268	-5993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCTGAGTCCGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	34138878	34139332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34139025_34139222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011224	chr17	+	543	2	ISM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	611	3601	611	-661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGAATGGGACCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34139221	34144664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34139484_34144383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011225	chr17	+	673	4	ISM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	6545	814	6545	-814	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAGACAGGATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34145155	34147451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34145324_34145401_34145492_34145603_34145681_34147113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011226	chr17	+	207	3	ISM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	6983	2584	6678	357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGGGTTCCATTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	34145288	34145682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34145324_34145401_34145492_34145600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011227	chr17	+	170	3	ISM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	7137	1112	6832	-1111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGGCCCAGATGACTC	NA	NA	NA	NA	NA	NA	NA	NA	34145442	34147154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34145492_34145600_34145681_34147113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011228	chr17	+	499	1	ISM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	9462	0	9157	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGCCTCTCATTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	34147767	34148266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34147800_34148300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011229	chr17	-	703	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	3	101	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCTACTTTACAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	34159314	34157895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011230	chr17	-	616	5	FSM	ENSMUSG00000024309.16	ENST00000395131.5	611	5	-1	-4	-1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTGAGCCAATAAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	34159393	34157922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159140_34159278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011231	chr17	+	527	3	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	3165	1163	3165	-1163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGCCCAGCGTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	34162798	34167508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34162911_34163455_34163556_34167193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011232	chr17	+	427	3	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	7579	825	7579	-825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGAGGTGGATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	34167212	34167846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34167508_34167616_34167712_34167809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011233	chr17	+	467	3	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	8246	93	8246	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGGGAAATTGTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	34167879	34168578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34167906_34168046_34168161_34168251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011234	chr17	+	372	1	ISM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	8666	0	8666	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGACCATCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34168299	34168671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34168300_34168700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011235	chr17	-	1424	1	FSM	ENSMUSG00000067370.5	ENSMUST00000087543.5	1580	1	158	-2	158	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGCGTCTTCACCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	34170304	34168880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34168900_34170300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011236	chr17	-	506	4	ISM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	499	-4	485	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCAGTTTGTCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	34174152	34170968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011237	chr17	-	496	4	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	493	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34174144	34170972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_34171093_34171194_34171287_34171374_34171566_34174051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011238	chr17	-	431	4	ISM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	-1	232	-1	-232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGGGGGTAAGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	34174652	34171204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34171287_34171376_34171566_34174051_34174151_34174591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011239	chr17	-	341	3	NNC	ENSMUSG00000008668.16	novel	560	5	NA	NA	1	-403	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAGGGGACTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	34174650	34171375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_34171566_34174051_34174144_34174591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011240	chr17	+	1198	2	ISM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	9847	0	9847	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGATTTTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	34184632	34186009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34184754_34184932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011241	chr17	+	1071	1	Genic_Genomic	ENSMUSG00000024319.19	novel	NA	NA	NA	NA	10157	4	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTTGTACTGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	34184942	34186013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_34184900_34186000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011242	chr17	-	458	1	NIC	ENSMUSG00000061232.17	novel	1570	8	NA	NA	3484	5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATAGATGAATAAACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34215479	34215021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_34215000_34215500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011243	chr17	-	897	4	FSM	ENSMUSG00000061232.17	ENST00000430151.2	895	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGAAGGAGAAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	34218963	34216031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34216132_34216258_34216524_34218244_34218521_34218707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011244	chr17	-	1077	3	ISM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	2264	10	2264	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTGCAAGACTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	34241390	34239775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34240458_34240656_34240931_34241269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011245	chr17	-	1600	2	ISM	ENSMUSG00000092595.3	ENSMUST00000168978.3	3711	11	3025	821	3025	-821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGTAGGCTGTGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	34247529	34245828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34246076_34246176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011246	chr17	-	2312	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTTGTCTTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	34250586	34247242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011247	chr17	+	1127	2	ISM	ENSMUSG00000039656.18	ENSMUST00000116612.3	2283	10	4759	-4	4759	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTCTGGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34256133	34257371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34256247_34256357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011248	chr17	-	591	1	ISM	ENSMUSG00000024335.21	ENST00000395287.5	3170	11	6147	0	5880	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTAGTGAGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	34331583	34330992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34331000_34331600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011249	chr17	-	949	3	ISM	ENSMUSG00000024335.21	ENSMUST00000095347.13	2617	12	4802	31	4802	-31	intron_retention	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCCTGTTGAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	34332661	34331367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34331683_34331829_34331953_34332150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011250	chr17	-	777	2	ISM	ENSMUSG00000024335.21	ENST00000395287.5	3170	11	4577	1285	4310	-941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTCTACGTGATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	34333153	34332277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34332807_34332905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011251	chr17	-	722	3	ISM	ENSMUSG00000024335.21	ENSMUST00000095347.13	2617	12	2911	1986	2911	-1986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTTAAGAGCTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	34334552	34333322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34333453_34333863_34334239_34334335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011252	chr17	-	576	4	ISM	ENSMUSG00000024335.21	ENSMUST00000095347.13	2617	12	2222	2750	2222	-2750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACGAAAAGACTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34335241	34334086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34334239_34334335_34334551_34334641_34334781_34335171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011253	chr17	+	251	2	ISM	ENSMUSG00000037649.11	ENSMUST00000042121.11	1658	6	0	3772	0	-3749	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAAAGACTCGATTCCG	NA	NA	NA	NA	NA	NA	NA	NA	34341805	34354303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34341909_34354155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011254	chr17	+	256	2	ISM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	46	1816	20	-1794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGCTCAGGGACAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	34354647	34356258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34354733_34356087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011255	chr17	+	265	2	ISM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	2329	654	2303	-632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGGTGTGGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34356930	34357420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34357156_34357380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011256	chr17	+	264	2	ISM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	2862	66	2836	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTATACCTTCCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	34357463	34358008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34357510_34357790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011257	chr17	+	205	1	ISM	ENSMUSG00000037649.11	ENSMUST00000042121.11	1658	6	16065	0	3243	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACTAGACAAGTGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	34357870	34358075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34357900_34358100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011258	chr17	-	443	3	ISM	ENSMUSG00000096727.4	ENST00000374859.3	702	6	3565	0	3565	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCAGAAGGCCGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	34402719	34401155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34401326_34402062_34402205_34402588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011259	chr17	-	472	4	ISM	ENSMUSG00000096727.4	ENST00000374859.3	702	6	1512	907	1512	-907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTAGCCAACTGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	34404772	34402062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34402205_34402588_34402719_34403255_34403383_34404699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011260	chr17	-	362	4	ISM	ENSMUSG00000096727.4	ENST00000374859.3	702	6	30	1431	30	-1431	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGTCCATTCCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	34406254	34402586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34402719_34403255_34403383_34404699_34404772_34406223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011261	chr17	+	524	2	ISM	ENSMUSG00000024338.16	ENST00000395339.7	948	6	-249	2092	-249	-2092	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCACTGCAGGGAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	34417119	34418330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34417520_34418206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011262	chr17	+	649	4	ISM	ENSMUSG00000024338.16	ENST00000395339.7	948	6	1245	0	1245	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTCTCTGGGTTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	34418613	34420422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34418657_34419114_34419245_34419684_34419890_34420151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011263	chr17	+	168	2	ISM	ENSMUSG00000024339.13	ENSMUST00000025197.6	3442	12	10927	1551	10927	-1551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATAGGGGAAATGACTA	NA	NA	NA	NA	NA	NA	NA	NA	34433427	34433744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34433471_34433619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011264	chr17	+	146	1	ISM	ENSMUSG00000024339.13	ENSMUST00000025197.6	3442	12	12649	0	12649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTTATGGTTACTACT	NA	NA	NA	NA	NA	NA	NA	NA	34435149	34435295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34435100_34435300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011265	chr17	+	662	4	FSM	ENSMUSG00000060586.12	ENST00000437650.2	664	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACACCCATTGTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	34528591	34534554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_34528835_34533143_34533430_34534019_34534128_34534529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011266	chr17	+	1629	4	ISM	ENSMUSG00000034673.15	ENSMUST00000183827.8	1186	10	2064	-703	2064	-281	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGGCGGTCACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	34813771	34816093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34813929_34814238_34814328_34814601_34814689_34814797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011267	chr17	-	329	1	Genic_Genomic	ENSMUSG00000015478.14	novel	NA	NA	NA	NA	2273	2	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCCAGTCTCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	34820391	34820062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_34820100_34820400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011268	chr17	-	570	4	ISM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	1490	295	1490	-295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTGCTGGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	34821174	34820359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011269	chr17	-	357	4	ISM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	188	842	188	-842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTCCTTGTCCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	34822476	34820906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34820963_34821058_34821172_34821264_34821284_34822307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011270	chr17	-	264	2	NIC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	206	-994	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGACCCAACACGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	34822458	34821058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_34821172_34822307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011271	chr17	+	288	2	Antisense	novelGene_ENSMUSG00000015478.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGCACACACACATATAC	NA	NA	NA	NA	NA	NA	NA	NA	34821072	34822486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr17_+_34821190_34822315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011272	chr17	+	1278	2	ISM	ENSMUSG00000034254.18	ENSMUST00000174595.2	1911	7	2181	-31	2181	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGATATCCATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	34830759	34832423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34830841_34831226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011273	chr17	+	1198	1	NIC	ENSMUSG00000034254.18	novel	2190	7	NA	NA	2647	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGATATCCATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	34831225	34832423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_34831200_34832400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011274	chr17	+	1216	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	8	46	8	-46	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTGCGCAAGATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34863745	34865252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_34863928_34864218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011275	chr17	+	1086	1	Genic_Genomic	ENSMUSG00000033739.9	novel	NA	NA	NA	NA	479	4	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTGTGTTGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	34864216	34865302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_34864200_34865300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011276	chr17	+	329	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	2873	3304	2873	-3132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTATGGTGCCAGGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	34934831	34935469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34934966_34935274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011277	chr17	+	244	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	3453	2869	3453	-2697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGCCAAAGTCAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	34935411	34935904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34935611_34935859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011278	chr17	+	225	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	3893	2583	3893	-2411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCGTGGCTTTGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	34935851	34936190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34935983_34936096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011279	chr17	+	265	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	4136	2240	4136	-2068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAGTGAGAACAAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	34936094	34936533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34936241_34936414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011280	chr17	+	387	3	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	4453	1781	4453	-1609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGATTCAGGTACCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	34936411	34936992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34936535_34936639_34936784_34936872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011281	chr17	+	191	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	4910	1592	4910	-1420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCTACAGTGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	34936868	34937181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34937004_34937125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011282	chr17	+	232	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	5203	1282	5203	-1110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGGTGGTTGGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34937161	34937491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34937259_34937356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011283	chr17	+	245	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	5397	1073	5397	-901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTCCGTGCTTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	34937355	34937700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34937509_34937608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011284	chr17	+	288	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	5871	575	5871	-403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGCCGTGGGGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	34937829	34938198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34937954_34938034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011285	chr17	+	362	2	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	6073	79	6073	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGCCACAATCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	34938031	34938694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34938199_34938499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011286	chr17	-	570	1	ISM	ENSMUSG00000092471.2	ENST00000435122.3	1722	9	2193	0	2190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTGCCATATCAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	34939036	34938466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34938500_34939000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011287	chr17	-	637	2	ISM	ENSMUSG00000092471.2	ENST00000435122.3	1722	9	1974	68	1971	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGAAGCCCTTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	34939255	34938534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34939065_34939148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011288	chr17	+	215	1	ISM	ENSMUSG00000033327.19	ENSMUST00000238305.2	12533	42	49050	16	6600	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGGCTCATCCTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	34938558	34938773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_34938600_34938800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011289	chr17	-	560	4	ISM	ENSMUSG00000092471.2	ENSMUST00000172970.2	1383	9	925	534	925	-534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTCCCTGGGGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	34940301	34939320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_34939491_34939709_34939911_34940024_34940112_34940199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011290	chr17	-	334	1	Genic_Genomic	ENSMUSG00000061207.12	novel	NA	NA	NA	NA	12620	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTGTGTCCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35043301	35042967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_35043000_35043300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011291	chr17	-	578	3	ISM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	12097	0	12097	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35043824	35042968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_35043301_35043489_35043638_35043726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011292	chr17	+	200	2	ISM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	92	1772	92	-1676	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCCGGGCAGTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	35056086	35056437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35056218_35056368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011293	chr17	+	268	2	ISM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	566	1188	186	-1139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCCCGGTTCCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	35056560	35056974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35056731_35056876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011294	chr17	+	321	2	ISM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	940	818	560	-769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCCCTCCTGCTACGT	NA	NA	NA	NA	NA	NA	NA	NA	35056934	35057344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35057113_35057201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011295	chr17	+	163	1	ISM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	2052	0	1672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCACTCTGGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	35058046	35058209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35058000_35058200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011296	chr17	+	413	1	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	14668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	35132614	35133027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_35132600_35133000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011297	chr17	-	238	1	Genic_Genomic	ENSMUSG00000092203.8	novel	NA	NA	NA	NA	1971	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATAGACTTTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35169453	35169215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_35169200_35169500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011298	chr17	-	578	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAAATAGACTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35171443	35169218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011299	chr17	-	270	4	FSM	ENSMUSG00000092203.8	ENSMUST00000173070.8	434	4	58	106	35	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGTATTAGACAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	35171389	35169322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35169452_35170860_35170902_35171111_35171150_35171327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011300	chr17	-	2954	1	FSM	ENSMUSG00000091971.4	ENSMUST00000087328.4	2967	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCGGGGCTGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	35191119	35188165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35188200_35191100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011301	chr17	+	285	3	ISM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	21	751	21	-749	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATATACAATAAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	35200876	35204116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35201062_35201595_35201664_35204084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011302	chr17	+	281	3	ISM	ENSMUSG00000007050.18	ENSMUST00000173004.2	870	6	2944	289	2944	-289	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGACAAGAACACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35204078	35204576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35204116_35204224_35204285_35204392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011303	chr17	+	221	1	Genic_Genomic	ENSMUSG00000007050.18	novel	NA	NA	NA	NA	3513	1	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGTCGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	35204647	35204868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_35204600_35204900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011304	chr17	+	324	2	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	483	12069	483	-12068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCTGCACACCTACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	35220532	35223230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35220807_35223180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011305	chr17	+	341	4	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	3208	11325	3208	-11324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAAACGGGACCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	35223257	35223974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35223316_35223412_35223552_35223747_35223870_35223952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011306	chr17	+	300	3	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	10732	3945	10732	-3944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGTGGTGCCGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	35230781	35231354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35230875_35231064_35231190_35231272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011307	chr17	+	321	2	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	13544	1226	13544	-1225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCCTGCTAGCCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35233593	35234073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35233754_35233912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011308	chr17	+	313	2	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	13862	854	13862	-853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACTGTAAGCCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	35233911	35234445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35234120_35234340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011309	chr17	+	320	2	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	14284	529	14284	-528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAAGCTGCAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	35234333	35234770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35234453_35234569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011310	chr17	+	381	2	ISM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	14603	-1	14603	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCGCTCTTGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35234652	35235300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35234896_35235162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011311	chr17	+	1469	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	-1	-2	-1	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTTAAAGTGTAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	35268940	35277727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011312	chr17	+	1449	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35268952	35277725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274379_35277305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011313	chr17	+	1443	6	NNC	ENSMUSG00000007041.10	novel	1466	6	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35268968	35277725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274389_35277305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011314	chr17	+	1317	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	25	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGGCTGTGACTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35278035	35281067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011315	chr17	+	507	3	ISM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	1946	0	1946	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	35280022	35281071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35280101_35280451_35280576_35280766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011316	chr17	-	826	4	FSM	ENSMUSG00000034923.10	ENST00000375832.5	821	4	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGCCTTAAATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	35302486	35299822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35299890_35300035_35300195_35301803_35302068_35302150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011317	chr17	-	817	4	NNC	ENSMUSG00000034923.10	novel	821	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTAGCCTTAAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	35302481	35299823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_35299890_35300035_35300195_35301803_35302060_35302145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011318	chr17	-	823	4	ISM	ENSMUSG00000034923.10	ENSMUST00000038507.7	1141	6	2105	368	2	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTAGCCTTAAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	35302481	35299823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_35299890_35300035_35300198_35301803_35302068_35302150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011319	chr17	-	959	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	2	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35340260	35335173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011320	chr17	+	613	2	ISM	ENSMUSG00000043311.8	ENSMUST00000061859.7	2142	3	275	1446	275	-1446	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGAGCCTGCAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	35345636	35346385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35345762_35345897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011321	chr17	+	1913	2	FSM	ENSMUSG00000043311.8	ENST00000375911.2	2347	2	434	0	396	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGACAGCCGGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35345757	35347857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_35347162_35347348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011322	chr17	+	1433	2	NNC	ENSMUSG00000043311.8	novel	2347	2	NA	NA	787	-68	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCAGGCATTGCTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	35346148	35347763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35347162_35347343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011323	chr17	+	1386	2	NNC	ENSMUSG00000043311.8	novel	2347	2	NA	NA	914	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTGACAGCCGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	35346275	35347855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35347162_35347355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011324	chr17	-	1374	2	Antisense	novelGene_ENSMUSG00000043311.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCCCCGGGGGGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	35347857	35346300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr17_-_35347170_35347352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011325	chr17	+	560	1	NIC	ENSMUSG00000043311.8	novel	2347	2	NA	NA	1910	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTCCACTCAGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	35347271	35347831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_35347300_35347800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011326	chr17	+	471	3	ISM	ENSMUSG00000024392.18	ENST00000362049.10	3578	24	13	8824	12	-8816	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGGCTGGGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	35354192	35357465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35354425_35355090_35355212_35357347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011327	chr17	+	495	4	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	2506	6879	2506	-6871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCAGGCCCAGCTCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	35357594	35359410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35357759_35357998_35358053_35358210_35358286_35359208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011328	chr17	+	464	3	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	3120	6362	3120	-6354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCTTCAGTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	35358208	35359927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35358286_35359208_35359466_35359797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011329	chr17	+	587	3	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	4118	5690	4118	-5682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCGAGGAGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	35359206	35360599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35359466_35359797_35359928_35360401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011330	chr17	+	581	3	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	4709	5231	4709	-5223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTAGGACAGTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	35359797	35361058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35359928_35360401_35360600_35360805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011331	chr17	+	609	4	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	5346	4474	5346	-4466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAAGGGTTGGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	35360434	35361815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35360600_35360805_35361059_35361282_35361361_35361702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011332	chr17	+	507	4	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	5742	4303	5742	-4295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCTGTTCTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	35360830	35361986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35361059_35361282_35361361_35361702_35361816_35361898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011333	chr17	+	553	4	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	6196	3630	6196	-3622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCCGGCTGTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	35361284	35362659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35361361_35361702_35361816_35361898_35361987_35362383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011334	chr17	+	661	3	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	6809	2866	6809	-2858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGATGTGGGTGTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	35361897	35363423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35361987_35362383_35362659_35363126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011335	chr17	+	599	3	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	7433	2545	7433	-2537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAGAGCCCAGATCG	NA	NA	NA	NA	NA	NA	NA	NA	35362521	35363744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35362659_35363126_35363419_35363574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011336	chr17	+	581	4	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	8044	2106	8044	-2098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATTGCTGCTCATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	35363132	35364183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35363419_35363574_35363745_35363921_35363976_35364112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011337	chr17	+	160	2	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	9029	1923	9029	-1915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACCTCCACTGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	35364117	35364366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35364216_35364304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011338	chr17	+	482	4	ISM	ENSMUSG00000024392.18	ENSMUST00000173550.8	3536	24	10121	7	9752	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	35364840	35366289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35364898_35365001_35365146_35365221_35365330_35366116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011339	chr17	+	138	2	ISM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	10751	75	10751	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCACCAGGGGACCACTT	NA	NA	NA	NA	NA	NA	NA	NA	35365839	35366214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35365880_35366116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011340	chr17	+	128	1	ISM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	12008	9	11073	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	35366161	35366289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35366200_35366300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011341	chr17	-	662	2	ISM	ENSMUSG00000024393.15	ENSMUST00000174805.2	6741	29	5486	7594	5486	-7594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGAAACCTGTCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35376459	35375657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_35376184_35376323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011342	chr17	+	684	3	FSM	ENSMUSG00000024399.6	ENST00000446745.2	684	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCATCTGTATTCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	35413490	35415122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_35413660_35414269_35414342_35414679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011343	chr17	+	447	1	NIC	ENSMUSG00000024399.6	novel	1160	3	NA	NA	1076	2	mono-exon	FALSE	NA	NA	NA	NA	NA	434	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTGTATTCATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35414677	35415124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_35414700_35415100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011344	chr17	-	1340	4	FSM	ENSMUSG00000024402.6	ENST00000418386.3	1340	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGTCTGCTTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35424145	35422140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35423126_35423350_35423451_35423533_35423639_35423995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011345	chr17	-	1447	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35454768	35439150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011346	chr17	+	533	3	NNC	ENSMUSG00000024403.17	novel	533	3	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCGCATGCGCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	35455491	35456856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35455668_35456092_35456194_35456600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011347	chr17	+	533	3	FSM	ENSMUSG00000024403.17	ENST00000483251.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCGCATGCGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	35455494	35456855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_35455672_35456092_35456194_35456600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011348	chr17	+	539	3	NNC	ENSMUSG00000024403.17	novel	533	3	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTCGCATGCGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	35455497	35456854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35455682_35456092_35456194_35456600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011349	chr17	+	283	2	ISM	ENSMUSG00000019432.16	ENSMUST00000172549.2	1770	11	4286	4611	4286	-4611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTAAATACCCTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	35465928	35468041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35466097_35467926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011350	chr17	+	276	2	ISM	ENSMUSG00000019432.16	ENSMUST00000172549.2	1770	11	10300	336	10300	-336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCCTCCTACAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	35471942	35472316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35472085_35472182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011351	chr17	+	202	1	ISM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	11736	24	10815	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCGTGTCTGTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35472457	35472659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35472500_35472700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011352	chr17	+	1278	4	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	1	1440	1	-1294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGGGTGTGGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	35481706	35485035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011353	chr17	+	1012	5	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	294	-627	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACACTCTAGGGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	35482365	35485702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35482625_35482814_35483091_35484759_35485036_35485162_35485325_35485663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011354	chr17	+	1104	5	ISM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	3049	0	2683	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35484754	35486475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011355	chr17	+	1116	4	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	2683	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35484754	35486475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35485036_35485162_35485325_35485663_35485703_35485841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011356	chr17	+	1076	3	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	2711	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35484782	35486475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35485036_35485162_35485325_35485814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011357	chr17	+	1075	3	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	2714	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35484785	35486475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35485036_35485162_35485327_35485814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011358	chr17	+	789	3	NNC	ENSMUSG00000073411.13	novel	1744	7	NA	NA	2792	-36	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACTTACATATAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	35484863	35486293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35485036_35485162_35485301_35485814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011359	chr17	+	929	4	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	2846	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35484917	35486475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35485036_35485162_35485301_35485663_35485703_35485841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011360	chr17	-	817	2	Antisense	novelGene_ENSMUSG00000073411.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAAGGACAGGTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	35486475	35485161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr17_-_35485332_35485828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011361	chr17	-	796	2	Antisense	novelGene_ENSMUSG00000073411.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGGAAGGACAGGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	35486475	35485163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr17_-_35485297_35485812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011362	chr17	+	703	2	NNC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	3381	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35485452	35486475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35485495_35485814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011363	chr17	+	636	1	NIC	ENSMUSG00000073411.13	novel	2102	8	NA	NA	3768	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35485839	35486475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_35485800_35486500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011364	chr17	+	1503	6	NNC	ENSMUSG00000060550.17	novel	1497	7	NA	NA	21	15	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGATGGAGAACCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	35658151	35662725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35658261_35658427_35658698_35658884_35659161_35661242_35661528_35661653_35661816_35662324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011365	chr17	+	276	1	ISM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	4270	209	1213	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGGATGCTGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	35821184	35821460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35821200_35821500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011366	chr17	-	1660	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	6	-1	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTTGAATCTAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35827715	35823629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011367	chr17	-	1473	3	NNC	ENSMUSG00000050410.16	novel	1665	4	NA	NA	424	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35827258	35823630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_35824069_35825366_35825918_35826774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011368	chr17	-	616	2	ISM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	27	3235	27	-3235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCGGCCTCATCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	35827655	35826868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_35827437_35827607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011369	chr17	+	313	2	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	32	9103	32	-9103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGGAAGAGGCGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	35829420	35832015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35829490_35831771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011370	chr17	+	416	2	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	2435	5612	2435	-5612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGGGCTGCGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	35831823	35835506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35832076_35835342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011371	chr17	+	414	3	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	5951	5134	5951	-5134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACCCTCCCTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	35835339	35835984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35835507_35835595_35835732_35835873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011372	chr17	+	411	3	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	6205	4800	6205	-4800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTCACTGTCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	35835593	35836318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35835732_35835873_35835985_35836156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011373	chr17	+	373	3	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	6768	3506	6768	-3506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTGTTGCCTGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	35836156	35837612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35836319_35837283_35837388_35837505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011374	chr17	+	266	3	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	9620	1532	9620	-1532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCTGCGTGGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	35839008	35839586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35839079_35839238_35839285_35839436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011375	chr17	+	323	2	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	10046	1272	10046	-1272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCTACGGGCAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35839434	35839846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35839586_35839674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011376	chr17	+	365	3	ISM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	10286	0	10286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAAGCCCGGAAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	35839674	35841118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35839864_35839941_35840044_35841044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011377	chr17	+	806	2	FSM	ENSMUSG00000039518.8	ENST00000376288.3	1409	2	34	569	34	-569	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAAGGACAACCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	35865575	35866523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_35865972_35866113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011378	chr17	+	440	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	442	-569	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAAGGACAACCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	35865983	35866523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_35866014_35866113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011379	chr17	+	455	1	ISM	ENSMUSG00000039518.8	ENSMUST00000044804.8	2678	2	3613	985	1096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGGATCCCAAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	35866637	35867092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_35866600_35867100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011380	chr17	-	1394	4	ISM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	9741	0	9741	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	35995068	35992483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011381	chr17	-	932	1	NIC	ENSMUSG00000003534.18	novel	3769	18	NA	NA	11394	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	35993415	35992483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_35992500_35993400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011382	chr17	-	684	5	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	11718	3478	5064	-3478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGTGTGCACAAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	35999745	35995961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011383	chr17	-	649	4	ISM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	10655	5556	4001	-5556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTAAGGCCTGCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36000808	35998039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_35998203_35999430_35999583_35999677_35999762_36000558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011384	chr17	+	1132	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCGAAGTGTATCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	36132575	36133816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_36132821_36132929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011385	chr17	+	1116	2	NNC	ENSMUSG00000003541.7	novel	1131	2	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGAAGTGTATCATTC	NA	NA	NA	NA	NA	NA	NA	NA	36132587	36133815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_36132818_36132929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011386	chr17	+	328	3	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	-39	8407	-39	-8407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAGCAACAGAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	36134199	36135095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36134394_36134698_36134756_36135018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011387	chr17	+	211	3	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	477	8237	477	-8237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTCAGAGCCTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	36134715	36135265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36134756_36135018_36135095_36135170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011388	chr17	+	238	2	ISM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	1047	8081	930	-7900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCCAGGGGACAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	36135168	36135602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36135262_36135457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011389	chr17	+	364	3	ISM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	1333	7264	1216	-7083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGAGATGGGGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	36135454	36136419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36135602_36135724_36135845_36136322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011390	chr17	+	310	3	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	1547	6718	1547	-6718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACAGGTGTTTATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	36135785	36136784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36135845_36136322_36136419_36136629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011391	chr17	+	318	2	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	2390	2604	2390	-2604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCGGAAGCAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	36136628	36140898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36136783_36140734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011392	chr17	+	371	3	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	6494	1816	6494	-1816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAATCGGGTGGGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	36140732	36141686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36140917_36141010_36141057_36141545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011393	chr17	+	355	3	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	6768	1501	6768	-1501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGGCAATGCAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36141006	36142001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36141057_36141545_36141684_36141834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011394	chr17	+	346	2	ISM	ENSMUSG00000059714.14	ENSMUST00000174080.8	1383	12	7585	-66	7585	66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGGGTTTGCCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36141823	36143568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36142000_36143398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011395	chr17	+	201	1	ISM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	9361	0	9244	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATACTTCTTTCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	36143482	36143683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36143500_36143700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011396	chr17	-	1227	1	Genic_Genomic	ENSMUSG00000001525.11	novel	NA	NA	NA	NA	3161	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1669	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGGCTGTGTGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36146037	36144810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_36144800_36146000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011397	chr17	-	1705	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	2	942	2	-942	multi-exon	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGGGTAAATGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	36149196	36145754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011398	chr17	-	1606	4	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	51	-987	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGCTGCCTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36149147	36145799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_36146927_36147054_36147166_36147519_36147629_36148888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011399	chr17	-	1159	2	NNC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	2055	-1043	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAGGCTGCTTAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	36147143	36145855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_36146917_36147045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011400	chr17	+	1465	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTCTGTCCATGACT	NA	NA	NA	NA	NA	NA	NA	NA	36172211	36176295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011401	chr17	+	546	3	FSM	ENSMUSG00000059791.15	ENST00000376420.9	983	3	52	385	52	-385	multi-exon	TRUE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAGCAGAGTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	36172326	36175668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_36172410_36174330_36174528_36175402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011402	chr17	+	308	1	ISM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	3538	239	3473	2	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCACCTCAGGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36175747	36176055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36175700_36176100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011403	chr17	+	2694	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	47	2	47	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCCTTCCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36176994	36186486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011404	chr17	-	1060	1	Genic_Genomic	ENSMUSG00000024426.18	novel	NA	NA	NA	NA	9170	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCGTTTGTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36211767	36210707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_36210700_36211800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011405	chr17	-	1257	2	ISM	ENSMUSG00000024426.18	ENSMUST00000056034.13	1930	10	8434	8	8434	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCTAAATTGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	36212503	36210751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36211765_36212259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011406	chr17	-	315	2	ISM	ENSMUSG00000024426.18	ENSMUST00000056034.13	1930	10	7994	1514	7994	-1514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGCCTGCAAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	36212943	36212257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36212504_36212874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011407	chr17	-	983	6	ISM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	1583	0	1583	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36225698	36221270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011408	chr17	+	1351	3	ISM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	12886	465	12886	-454	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGCAACTGTTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	36240973	36242708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36241057_36241183_36241784_36242040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011409	chr17	+	721	1	ISM	ENSMUSG00000039220.17	ENSMUST00000087211.9	4255	20	14987	10	14357	3	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTTAACCCCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	36242444	36243165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36242400_36243200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011410	chr17	-	1085	4	ISM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	11513	0	11513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36269140	36267710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011411	chr17	-	1265	1	NIC	ENSMUSG00000038500.16	novel	1878	4	NA	NA	4754	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	36284697	36283432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_36283400_36284700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011412	chr17	-	1682	3	FSM	ENSMUSG00000038500.16	ENST00000376557.3	1718	3	36	0	36	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATCTTCTCTCATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	36290148	36283434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_36284696_36285414_36285706_36290018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011413	chr17	-	1258	3	FSM	ENSMUSG00000038500.16	ENSMUST00000173585.2	770	3	115	-603	115	-358	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGGCCAGTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36289336	36283792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_36284696_36285414_36285706_36289272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011414	chr17	+	360	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	203	8680	203	-8680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCAAGGAGAAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	36290945	36291674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36291140_36291508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011415	chr17	+	305	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	764	8264	764	-8264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGGGCTACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36291506	36292090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36291675_36291953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011416	chr17	+	261	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1210	8033	1210	-8033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGCTACTTTGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	36291952	36292321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36292091_36292198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011417	chr17	+	440	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	1448	6730	1448	-6730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGCTGCAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	36292190	36293624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36292351_36292449_36292522_36293416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011418	chr17	+	479	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	2673	5894	2673	-5894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTATTGGCTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	36293415	36294460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36293625_36293838_36293935_36294286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011419	chr17	+	307	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	3611	1819	3611	-1819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGTAGAAAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	36294353	36298535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36294482_36298356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011420	chr17	+	344	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	7612	1575	7612	-1575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCTTCCTGGCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	36298354	36298779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36298536_36298616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011421	chr17	+	526	3	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	7871	723	7871	-723	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGGAGGATGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	36298613	36299631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36298780_36299004_36299146_36299412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011422	chr17	+	256	2	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	8253	836	8253	-836	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGGAGGAAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36298995	36299518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36299146_36299412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011423	chr17	+	267	1	ISM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	9345	0	9345	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGAGCGGCTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	36300087	36300354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_36300100_36300400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011424	chr17	-	675	3	NNC	ENSMUSG00000067212.9	novel	1472	7	NA	NA	1753	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGAATGAATGAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	36341994	36340867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_36341124_36341448_36341587_36341713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011425	chr17	-	779	5	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	941	177	941	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGCACTGACTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	36342806	36341044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36341124_36341262_36341293_36341469_36341587_36341713_36341990_36342529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011426	chr17	-	890	4	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	433	651	433	-651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGGAGCTGTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	36343314	36341518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36341587_36341713_36341990_36342529_36342806_36343044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011427	chr17	-	819	4	ISM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	104	992	104	-992	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGGAGCTTGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	36343643	36341859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36341990_36342529_36342806_36343044_36343315_36343500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011428	chr17	+	727	1	Genic_Genomic	ENSMUSG00000092368.2	novel	NA	NA	NA	NA	43259	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTATCTCTATTAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	36348603	36349330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_36348600_36349300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011429	chr17	-	156	1	NIC	ENSMUSG00000024446.14	novel	437	4	NA	NA	2056	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATCATCTTCCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	36566692	36566536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_36566500_36566700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011430	chr17	-	453	4	ISM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	359	-7	146	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCTCAACTGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	36568602	36566551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011431	chr17	-	593	4	ISM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	4	277	4	-277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCAGTGGTAAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	36568957	36566835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_36566962_36568333_36568417_36568497_36568599_36568674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011432	chr17	-	732	1	Genic_Genomic	ENSMUSG00000045409.17	novel	NA	NA	NA	NA	9617	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGAGTTGCGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	36570495	36569763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_36569800_36570500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011433	chr17	+	711	1	ISM	ENSMUSG00000024457.17	ENSMUST00000130367.8	3187	10	21545	0	21504	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	37169579	37170290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_37169600_37170300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011434	chr17	+	652	3	FSM	ENSMUSG00000092239.2	ENSMUST00000174380.2	656	3	7	-3	7	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCCTCAACTTTGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	37234690	37244327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_37234741_37236244_37236354_37243834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011435	chr17	-	1600	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTTAAATACAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	37262604	37259245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_37260447_37260768_37260878_37262314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011436	chr17	-	1200	1	Genic_Genomic	ENSMUSG00000036398.14	novel	NA	NA	NA	NA	2159	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGTTAAATACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	37260446	37259246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_37259200_37260400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011437	chr17	-	622	4	FSM	ENSMUSG00000036315.14	ENSMUST00000113669.9	742	4	122	-2	-42	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTTATGTGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	37269252	37265245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011438	chr17	-	607	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	105	-2	54	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGTTATGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37269320	37265247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011439	chr17	+	595	3	NNC	ENSMUSG00000036214.15	novel	976	3	NA	NA	14	-371	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAGAAAAGAAGGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	37269497	37276143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_37269599_37275248_37275325_37275725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011440	chr17	+	578	1	ISM	ENSMUSG00000036214.15	ENSMUST00000209623.2	1218	3	1224	2	1224	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCTAATGGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	37275937	37276515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_37275900_37276500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011441	chr17	+	2578	3	FSM	ENSMUSG00000036036.16	ENSMUST00000174672.2	2597	3	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37314576	37321524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_37315796_37316941_37317087_37320310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011442	chr17	+	359	1	ISM	ENSMUSG00000036036.16	ENSMUST00000089968.13	1991	6	9111	0	6608	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37321165	37321524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_37321200_37321500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011443	chr17	-	633	3	FSM	ENSMUSG00000076439.13	ENST00000376898.7	626	3	-6	-1	-6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTGTCTGGGCAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37331619	37323225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_37323375_37328366_37328494_37331262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011444	chr17	-	141	1	NIC	ENSMUSG00000076439.13	novel	1704	8	NA	NA	8246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTGTCTGGGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	37323367	37323226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_37323200_37323400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011445	chr17	-	619	3	NNC	ENSMUSG00000076439.13	novel	626	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTGTCTGGGCAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	37331613	37323226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_37323375_37328366_37328494_37331269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011446	chr17	-	251	2	FSM	ENSMUSG00000076439.13	ENST00000416766.6	521	2	234	36	234	-36	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCTACAACTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	37331379	37323262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_37323397_37331262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011447	chr17	+	1619	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	232	-2	232	2	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGACTGTGGAGGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	40157475	40159094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_40157500_40159100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011448	chr17	-	724	1	Genic_Genomic	ENSMUSG00000118642.2	novel	NA	NA	NA	NA	3	2	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCTCACTAAACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	40159715	40158991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_40159000_40159700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011449	chr17	-	882	4	ISM	ENSMUSG00000023919.9	ENSMUST00000239430.2	1442	9	7292	-1	7292	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGATGTGTGAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	41238150	41233944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011450	chr17	-	887	4	ISM	ENSMUSG00000023919.9	ENSMUST00000087114.5	1942	9	103	8591	103	-8587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTTTTTCTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	41245835	41242532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_41242668_41243686_41243742_41243971_41244107_41245273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011451	chr17	+	1217	3	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	23642	523	23642	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAGGTTCAAAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	41269217	41272356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_41269369_41269592_41269761_41271458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011452	chr17	+	898	1	Genic_Genomic	ENSMUSG00000023921.10	novel	NA	NA	NA	NA	26408	2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTGTTGTGTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	41271983	41272881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_41272000_41272900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011453	chr17	-	1122	2	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	24581	496	24581	-496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTTATTCATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	42978470	42974765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_42974812_42977394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011454	chr17	-	1224	2	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	22331	3485	22331	-3485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCCTTGTGATCGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	42980720	42977754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_42978778_42980519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011455	chr17	-	2959	1	ISM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	80480	0	80480	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	43106800	43103841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_43103800_43106800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011456	chr17	-	1608	2	ISM	ENSMUSG00000023912.11	ENSMUST00000024705.6	2895	9	20135	237	20053	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATCCCTGTACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	43957970	43953018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_43954568_43957911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011457	chr17	+	953	4	ISM	ENSMUSG00000023963.11	ENST00000619708.4	1481	11	63315	-317	63315	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGAATCAAATGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	44041891	44061503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_44041959_44042815_44042905_44057415_44057504_44060794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011458	chr17	+	753	1	Genic_Genomic	ENSMUSG00000023963.11	novel	NA	NA	NA	NA	82996	3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGATGTCTGCCTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	44061572	44062325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_44061600_44062300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011459	chr17	-	2324	1	Genic_Genomic	ENSMUSG00000023961.17	novel	NA	NA	NA	NA	7134	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGCCTTCTTAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44409521	44407197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_44407200_44409500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011460	chr17	+	229	2	ISM	ENSMUSG00000023959.11	ENSMUST00000024755.7	5862	6	259	42930	0	-38993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGGACCCTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	44499729	44548129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_44499849_44548019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011461	chr17	+	241	2	ISM	ENSMUSG00000023959.11	ENSMUST00000024755.7	5862	6	48547	38010	48288	-34073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCTGGTTCTTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	44548017	44553049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_44548130_44552920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011462	chr17	+	236	2	ISM	ENSMUSG00000023959.11	ENSMUST00000024755.7	5862	6	53448	31345	53189	-27408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGACCCTTCTAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	44552918	44559714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_44553047_44559606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011463	chr17	+	233	2	ISM	ENSMUSG00000023959.11	ENSMUST00000024755.7	5862	6	60136	9556	59877	-5619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGAGCTGACCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	44559606	44581503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_44559714_44581377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011464	chr17	+	261	2	ISM	ENSMUSG00000023959.11	ENST00000644878.1	1002	6	81697	230	81697	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCTGCACTGGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	44581426	44611092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_44581560_44610964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011465	chr17	+	172	1	Genic_Genomic	ENSMUSG00000023959.11	novel	NA	NA	NA	NA	111423	2	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCCTGCTCCTCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	44611152	44611324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_44611200_44611300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011466	chr17	+	320	3	ISM	ENSMUSG00000038954.15	ENST00000637763.2	727	7	0	45162	0	-45162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCACGGGCGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	45302619	45314117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_45302708_45305203_45305295_45313976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011467	chr17	+	421	4	ISM	ENSMUSG00000038954.15	ENST00000637763.2	727	7	2582	11569	2582	-11569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACAGTCTCTGCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	45305201	45347710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_45305295_45313976_45314117_45344124_45344201_45347598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011468	chr17	+	447	4	ISM	ENSMUSG00000038954.15	ENST00000637763.2	727	7	11347	10209	11347	-10209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTATCAGAAAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	45313966	45349070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_45314117_45344124_45344201_45347598_45347712_45348962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011469	chr17	+	390	4	ISM	ENSMUSG00000038954.15	ENST00000637763.2	727	7	41524	-1	41524	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTAATAACAGAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	45344143	45359280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_45344201_45347598_45347712_45348962_45349071_45359168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011470	chr17	-	693	3	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	29086	-1	29086	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGCCTTTTGTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	45715577	45702808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_45703231_45703918_45704132_45715519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011471	chr17	-	612	4	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	18013	18927	18013	-18927	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAGATGCTGCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	45726650	45721736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_45721865_45722753_45722917_45724047_45724197_45726478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011472	chr17	-	616	4	ISM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	16679	19943	16679	-19943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCAGCTCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45727984	45722752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_45722917_45724047_45724197_45726478_45726668_45727870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011473	chr17	+	633	2	ISM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	12888	11	12888	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTGTATGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45830654	45831758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_45830741_45831211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011474	chr17	+	564	1	NIC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	13439	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	45831205	45831769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_45831200_45831800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011475	chr17	+	123	1	ISM	ENSMUSG00000023947.9	ENSMUST00000024742.9	2435	6	7344	0	7109	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGTTATACGTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	45873972	45874095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_45874000_45874100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011476	chr17	+	1304	3	FSM	ENSMUSG00000037089.12	ENST00000538577.5	1303	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCAGTAAAGACCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	45874822	45878172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_45874995_45875505_45875700_45877234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011477	chr17	+	1870	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	33	3	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCTGTGTTTTGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	45874832	45878593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011478	chr17	+	1208	3	NNC	ENSMUSG00000037089.12	novel	2326	3	NA	NA	424	-25	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCCCCAGTACAGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	45875554	45878146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_45875700_45875854_45876006_45877234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011479	chr17	+	550	2	ISM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	962	0	717	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGCCAGCTCTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	45875847	45876981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_45876006_45876589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011480	chr17	+	397	1	NIC	ENSMUSG00000037089.12	novel	850	4	NA	NA	1454	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGCCAGCTCTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	45876584	45876981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_45876600_45877000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011481	chr17	+	1367	1	Genic_Genomic	ENSMUSG00000037089.12	novel	NA	NA	NA	NA	2101	1	mono-exon	FALSE	NA	NA	NA	NA	NA	312	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTTGGTTGGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	45877231	45878598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_45877200_45878600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011482	chr17	-	805	2	ISM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	6260	0	5947	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	45897241	45896125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_45896709_45897019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011483	chr17	-	499	1	ISM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	6875	2	6562	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45896626	45896127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_45896100_45896600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011484	chr17	-	789	2	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	5956	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45897232	45896127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_45896704_45897019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011485	chr17	-	1092	5	ISM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	4183	2	3870	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45899318	45896127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011486	chr17	-	620	1	Genic_Genomic	ENSMUSG00000079471.5	novel	NA	NA	NA	NA	377	1	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGGTGGCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	45912515	45911895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_45911900_45912500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011487	chr17	-	653	2	FSM	ENSMUSG00000079471.5	ENSMUST00000178858.3	804	2	7	144	7	139	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATTTAGCTAAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	45912986	45912040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_45912612_45912904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011488	chr17	-	613	1	ISM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	25476	0	25476	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTGGCAGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	45971709	45971096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_45971100_45971700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011489	chr17	+	650	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGCTGTGATCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	45997246	46009425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_45997354_46006407_46006499_46008973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011490	chr17	+	459	1	Genic_Genomic	ENSMUSG00000023939.8	novel	NA	NA	NA	NA	11718	3	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGAGCTGTGATCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	46008965	46009424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_46009000_46009400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011491	chr17	-	319	3	ISM	ENSMUSG00000023951.19	ENSMUST00000113519.2	513	7	2955	5592	2955	-5592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGTGAGGCCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	46339327	46335375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46335447_46336272_46336470_46339276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011492	chr17	+	678	4	ISM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	11771	-3	11761	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTCAGTGCTTAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	46433682	46439839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46433758_46436215_46436340_46436568_46436639_46439430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011493	chr17	+	415	1	Genic_Genomic	ENSMUSG00000023967.10	novel	NA	NA	NA	NA	17501	1	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTCAGTGCTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	46439422	46439837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_46439400_46439800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011494	chr17	-	146	1	ISM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	14800	0	14800	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTGATTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	46440342	46440196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46440200_46440300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011495	chr17	-	162	2	ISM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	9106	204	9106	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCAACGCACTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	46446036	46440400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46440425_46445898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011496	chr17	-	141	2	ISM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	7443	5740	7443	-5740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCCTGGACTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	46447699	46445936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46446046_46447667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011497	chr17	-	137	2	ISM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	266	12334	266	-12334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAGAGTTGCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	46454876	46452530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46452639_46454847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011498	chr17	-	1272	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGATTTAGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46464479	46458312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_46459211_46463704_46463968_46464368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011499	chr17	-	1260	3	NNC	ENSMUSG00000034509.10	novel	1272	3	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACTTTTGATTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	46464475	46458316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_46459207_46463704_46463968_46464368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011500	chr17	-	909	3	FSM	ENSMUSG00000034509.10	ENST00000451025.6	914	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATAAGGACAATGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	46471557	46458696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_46459211_46463704_46464078_46471535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011501	chr17	+	586	5	ISM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	147	35368	147	-35368	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGTAAACAAGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	46513854	46519156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011502	chr17	+	594	2	ISM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	39041	939	39041	-939	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAAGGGTCCCACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	46552748	46553585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46552817_46553059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011503	chr17	+	552	1	ISM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	40265	0	40265	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	46553972	46554524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46554000_46554500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011504	chr17	-	719	4	ISM	ENSMUSG00000067148.16	ENSMUST00000124655.8	829	7	1624	-181	1624	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTTTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	46555875	46554845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011505	chr17	-	505	3	NNC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	1963	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTTTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	46555536	46554845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_46555147_46555231_46555349_46555449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011506	chr17	-	579	5	ISM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	1927	604	446	-423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTGCGCAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	46557053	46555449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011507	chr17	+	1074	4	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	2761	221	2761	-221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGCAGCAGGTGCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	46561766	46563242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46561852_46562039_46562154_46562289_46562414_46562491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011508	chr17	+	817	2	NNC	ENSMUSG00000071074.10	novel	2035	9	NA	NA	3643	106	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGGGAGATGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	46562648	46563569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_46563410_46563513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011509	chr17	+	752	1	ISM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	3706	0	3706	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGGTTCACAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	46562711	46563463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46562700_46563500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011510	chr17	-	1438	1	ISM	ENSMUSG00000012296.17	ENSMUST00000180283.2	2368	9	23718	20	4479	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTCTTTCTCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	46570234	46568796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46568800_46570200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011511	chr17	-	1504	2	ISM	ENSMUSG00000012296.17	ENSMUST00000225413.2	2189	8	3767	190	3767	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTAGGCCTGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	46570946	46568989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46570410_46570862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011512	chr17	+	1129	3	ISM	ENSMUSG00000047428.15	ENSMUST00000166617.8	1528	6	3024	52	2869	22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAGAATGTAAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	46611877	46614145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46612008_46612569_46612715_46613291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011513	chr17	+	1192	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCACGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	46807634	46810550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011514	chr17	+	1160	4	NNC	ENSMUSG00000040658.8	novel	1190	4	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCACGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	46807658	46810550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_46807899_46809350_46809424_46809580_46809680_46809802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011515	chr17	-	1290	4	ISM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	25	38646	25	-38646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATCCTGGGGCCGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	46854686	46850264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46850315_46851164_46851669_46852610_46852766_46854105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011516	chr17	-	543	1	ISM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	64491	0	64491	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	46875939	46875396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46875400_46875900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011517	chr17	+	589	4	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	4	-1532	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGATGGCTGGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	46957158	46959513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_46957325_46958315_46958485_46959162_46959301_46959397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011518	chr17	+	545	4	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	1114	1369	-14	-1349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGGCACAAAAGCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	46958309	46959696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46958485_46959162_46959305_46959397_46959514_46959584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011519	chr17	+	401	2	FSM	ENSMUSG00000002767.14	ENST00000489623.1	397	2	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTTATCTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	46958321	46961047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_46958485_46960809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011520	chr17	+	400	4	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	1982	1059	854	-1039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTGCCCTCGAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	46959177	46960006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46959305_46959397_46959514_46959584_46959696_46959960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011521	chr17	+	490	4	ISM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	2269	0	1141	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTTTCACTTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	46959464	46961065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_46959514_46959584_46959696_46959960_46960035_46960809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011522	chr17	+	259	1	NIC	ENSMUSG00000002767.14	novel	991	7	NA	NA	2483	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTTTCACTTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	46960806	46961065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_46960800_46961100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011523	chr17	-	437	1	ISM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	5904	4	5817	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	46985912	46985475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46985500_46985900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011524	chr17	-	424	4	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	3511	774	3511	-774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATCATTCTGACTTACA	NA	NA	NA	NA	NA	NA	NA	NA	46988218	46987463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46987504_46987622_46987732_46987869_46987957_46988030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011525	chr17	-	402	3	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	3003	1341	3003	-1341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCTGTTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46988726	46988030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46988245_46988353_46988426_46988610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011526	chr17	-	506	3	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	1611	2203	1611	-2203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCCTGCAACGTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	46990118	46988892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46989035_46989206_46989420_46989967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011527	chr17	-	536	3	ISM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	-90	2539	-3	-2539	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCACATTTTCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	46991819	46989228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46989420_46989967_46990121_46991627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011528	chr17	+	1008	4	FSM	ENSMUSG00000002768.9	ENST00000642748.1	1035	4	28	-1	16	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTTCTGAGCGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	46991724	46994076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_46991917_46992542_46992824_46992934_46993038_46993644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011529	chr17	+	819	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	1	125	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGACTCAGACCTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	46991912	46993903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011530	chr17	+	686	4	FSM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	38	135	-18	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGACTCAGACCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46992087	46993902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_46992132_46992542_46992824_46992934_46993038_46993644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011531	chr17	-	336	1	ISM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	21676	0	21676	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	46994252	46993916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46993900_46994300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011532	chr17	-	378	3	ISM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	4873	4531	4873	-4531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAGATGGTGGAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	47011055	46998447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_46998572_46998762_46998956_47010994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011533	chr17	-	1206	1	Genic_Genomic	ENSMUSG00000023973.14	novel	NA	NA	NA	NA	15287	2	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGGGGTTTTGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	47047834	47046628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_47046600_47047800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011534	chr17	-	1494	4	ISM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	8933	47	8914	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTACTGCTATGAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	47054207	47046677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011535	chr17	+	483	1	FSM	ENSMUSG00000062619.7	ENSMUST00000071430.7	762	1	279	0	279	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAACTTGGCAGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	47083839	47084322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_47083800_47084300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011536	chr17	-	247	1	Genic_Genomic	ENSMUSG00000063888.8	novel	NA	NA	NA	NA	7736	7	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCGCCCAGTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47085072	47084825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_47084800_47085100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011537	chr17	-	408	2	ISM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	4384	1643	3610	95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTCTCGAAATCCACG	NA	NA	NA	NA	NA	NA	NA	NA	47089198	47086475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47086663_47088977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011538	chr17	-	506	4	ISM	ENSMUSG00000063888.8	ENST00000493763.7	762	6	2457	-2	2457	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCTTGGGCCTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	47090351	47086568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47086595_47088968_47089198_47089335_47089446_47090210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011539	chr17	-	348	3	ISM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	2103	955	1329	-955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAGATTAACAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	47091479	47089398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47089446_47090210_47090349_47091316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011540	chr17	-	269	2	ISM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	763	2876	-11	-2876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTACAGTACCAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	47092819	47091319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47091478_47092708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011541	chr17	+	607	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	558	-1	558	1	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGTTTGGCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	47202167	47202774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_47202200_47202800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011542	chr17	+	1008	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	11	-2	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	47679822	47689606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011543	chr17	+	480	1	NIC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	9003	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	47689124	47689604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_47689100_47689600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011544	chr17	-	1203	1	ISM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	13040	0	12189	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTATGATTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	47800177	47798974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47799000_47800200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011545	chr17	+	399	2	Antisense	novelGene_ENSMUSG00000023980.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGGAAGTGGAAGAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	47801066	47804629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr17_+_47801205_47804368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011546	chr17	-	557	3	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	6944	0	6944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGGGGCTGGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	47805422	47801066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47801208_47804369_47804630_47805266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011547	chr17	-	601	4	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	3200	3299	3200	-3299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGATGGGCTGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	47809166	47804365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011548	chr17	-	435	4	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	2803	4200	2803	-4200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCCACCCCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	47809563	47805266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47805415_47807502_47807628_47809102_47809166_47809464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011549	chr17	-	436	4	ISM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	9	6436	9	-6436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTGGGAGCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	47812357	47807502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47807628_47809102_47809166_47809464_47809564_47812208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011550	chr17	+	1977	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47904394	47910614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011551	chr17	+	1638	4	FSM	ENSMUSG00000034165.17	ENST00000414200.6	1652	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATCATGCTGCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	47904479	47910576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_47904778_47908344_47908505_47908927_47909065_47909533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011552	chr17	+	1540	4	NNC	ENSMUSG00000034165.17	novel	1977	5	NA	NA	1000	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47905709	47910614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_47905875_47908344_47908505_47908927_47909062_47909533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011553	chr17	+	517	1	ISM	ENSMUSG00000034165.17	ENSMUST00000037333.17	1999	7	94045	2	3105	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47910097	47910614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_47910100_47910600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011554	chr17	-	2268	1	Genic_Genomic	ENSMUSG00000023988.9	novel	NA	NA	NA	NA	9895	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTAAGACCCCACAATCA	NA	NA	NA	NA	NA	NA	NA	NA	47912522	47910254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_47910300_47912500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011555	chr17	-	2426	3	ISM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	8708	392	8708	-392	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCACAACCCCAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	47913709	47910647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47912824_47913316_47913420_47913562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011556	chr17	+	429	2	FSM	ENSMUSG00000092558.4	ENST00000409060.1	425	2	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGCAGGATATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47923882	47930003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_47924047_47929738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011557	chr17	+	1821	3	ISM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	1380	123	0	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTCTGCTTTGTACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	47923886	47935220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_47924043_47929733_47929988_47933809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011558	chr17	+	430	2	NIC	ENSMUSG00000092558.4	novel	425	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGCAGGATATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47923886	47930003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_47924047_47929733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011559	chr17	+	416	2	NNC	ENSMUSG00000092558.4	novel	425	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGCAGGATATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47923886	47930003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_47924047_47929747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011560	chr17	+	675	3	FSM	ENSMUSG00000092558.4	ENST00000265350.9	843	3	4	164	4	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGACTCGGTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	47923890	47934079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_47924047_47929738_47929988_47933809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011561	chr17	+	1430	3	NIC	ENSMUSG00000092558.4	novel	843	3	NA	NA	36	-482	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTACTACAGAGACATTTA	NA	NA	NA	NA	NA	NA	NA	NA	47923922	47934861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_47924047_47929733_47929988_47933809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011562	chr17	+	1518	2	NNC	ENSMUSG00000092558.4	novel	843	3	NA	NA	5861	-250	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTTTGGTTGTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	47929747	47935093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_47929982_47933809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011563	chr17	+	1797	4	ISM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	5921	7878	5921	-7878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCCACACGCAGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	47929807	47984241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_47929988_47933809_47934080_47960874_47960949_47982968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011564	chr17	+	1536	1	NIC	ENSMUSG00000092558.4	novel	2054	4	NA	NA	9921	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGTAGTTGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47933807	47935343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_47933800_47935300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011565	chr17	+	1828	5	ISM	ENSMUSG00000090115.8	ENST00000373010.5	2029	6	22199	22	22199	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGGAGGCAAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	47983072	47991794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011566	chr17	+	1461	5	ISM	ENSMUSG00000090115.8	ENSMUST00000024779.15	8252	7	42301	5544	23042	303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAAGCACTGCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	47983915	47992119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011567	chr17	-	427	1	Genic_Genomic	ENSMUSG00000079444.10_ENSMUSG00000033475.16	novel	NA	NA	NA	NA	1004	8	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGGCATGAGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	47997989	47997562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_47997600_47998000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011568	chr17	-	835	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	-137	51	-137	43	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGTAAAAAGTCCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	47999245	47997621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_47997934_47998112_47998214_47998823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011569	chr17	-	570	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	47998969	47997664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_47997988_47998112_47998214_47998823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011570	chr17	-	772	3	ISM	ENSMUSG00000096549.10	ENSMUST00000113299.6	990	5	1301	-126	533	126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGGTACTGCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	48001100	47999315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_47999765_48000206_48000412_48000982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011571	chr17	-	655	3	ISM	ENSMUSG00000096549.10	ENST00000394259.5	778	4	437	-2	437	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAACCCTGGCCCGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	48001196	47999837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_48000074_48000206_48000412_48000982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011572	chr17	-	726	4	FSM	ENSMUSG00000096549.10	ENST00000394259.5	778	4	16	36	16	-36	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCACGGCACAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	48001617	47999875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_48000074_48000206_48000412_48000982_48001187_48001498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011573	chr17	-	695	3	ISM	ENSMUSG00000079444.10	ENSMUST00000143789.5	2721	9	142	4643	-77	-4197	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTCCTCCACAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	48005238	48002306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_48002390_48003259_48003405_48004771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011574	chr17	+	1230	2	ISM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	3941	-1	3941	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTTGTCCTGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	48100585	48103341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_48100734_48102259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011575	chr17	+	383	2	ISM	ENSMUSG00000023993.8	ENST00000373127.8	874	5	6	6442	6	-6442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTACCCTAAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	48666960	48667495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_48667011_48667162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011576	chr17	+	879	5	ISM	ENSMUSG00000023993.8	ENST00000426005.6	927	6	204	-4	204	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTACACTTTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	48667158	48673941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_48667496_48671916_48672026_48672535_48672622_48673023_48673077_48673647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011577	chr17	+	492	3	ISM	ENSMUSG00000023993.8	ENST00000373127.8	874	5	4959	-4	4959	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTACACTTTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	48671913	48673941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_48672026_48672535_48672622_48673647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011578	chr17	+	300	1	NIC	ENSMUSG00000023993.8	novel	1220	6	NA	NA	6690	7	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACACTTTAATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	48673644	48673944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_48673600_48673900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011579	chr17	+	1268	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	57	-1	-9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGTTTGCACACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	48717098	48724283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011580	chr17	+	375	3	FSM	ENSMUSG00000040771.15	ENST00000464633.5	374	3	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGTGGGACTAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	48717851	48723860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_48717933_48718291_48718437_48723711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011581	chr17	+	414	1	NIC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	5853	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAAGGGTAAACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	48723707	48724121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_48723700_48724100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011582	chr17	-	1421	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCCTGTTCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	48739958	48726257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_48726662_48729968_48730534_48739506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011583	chr17	-	389	1	Genic_Genomic	ENSMUSG00000040260.9	novel	NA	NA	NA	NA	40137	2	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAAGAGGGGTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	49765777	49765388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_49765400_49765800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011584	chr17	-	689	3	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	38147	0	38147	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGAAAGAGGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	49767767	49765390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49765776_49766080_49766252_49767634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011585	chr17	-	435	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	34849	731	34849	-667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGAGGAAGATGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	49771065	49766121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49766252_49767634_49767767_49769168_49769230_49770953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011586	chr17	-	562	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	29422	2244	29422	-2180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGATGGCCCAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	49776492	49767634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49767767_49769168_49769230_49770953_49771062_49771490_49771660_49776400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011587	chr17	-	477	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	29116	5563	29116	-5499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGTCCCTCAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	49776798	49770953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49771062_49771490_49771660_49776400_49776490_49776687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011588	chr17	-	451	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	26839	6099	26839	-6035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGACCAATGAACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	49779075	49771489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49771660_49776400_49776490_49776687_49776795_49778990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011589	chr17	-	649	5	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	18921	11355	18921	10524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACATGAGATTGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	49786993	49776745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49776795_49778990_49779076_49780313_49780421_49783475_49783584_49786693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011590	chr17	-	554	3	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	18270	18126	18270	3753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTTTGAAAAAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	49787644	49783516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49783584_49786693_49786994_49787457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011591	chr17	-	586	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	15821	21400	15821	479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCTTCTCCAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	49790093	49786790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49786994_49787457_49787643_49787751_49787811_49789954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011592	chr17	-	488	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	13391	22081	13391	-202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGAGAGCTCAGTACGC	NA	NA	NA	NA	NA	NA	NA	NA	49792523	49787471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49787643_49787751_49787811_49789954_49790094_49792404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011593	chr17	-	595	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	8557	28104	8557	-6225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAGCCAGGAGGTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	49797357	49793494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49793539_49795214_49795319_49795972_49796084_49797021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011594	chr17	-	574	4	ISM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	2692	31631	2692	-9752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCAATGGGTTGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	49803222	49797021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_49797356_49800848_49800944_49801402_49801478_49803152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011595	chr17	+	209	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGTTGGAAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	51006718	51006927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_51006700_51006900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011596	chr17	-	1049	1	ISM	ENSMUSG00000023927.16	ENSMUST00000144331.8	6243	11	92969	2468	71216	3	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGGGTTTGTCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	52046731	52045682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_52045700_52046700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011597	chr17	-	1406	4	ISM	ENSMUSG00000023927.16	ENST00000454909.6	3748	11	51288	838	35580	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAACTGGCCCCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	52082367	52046523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_52047436_52049673_52049878_52074919_52075076_52082233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011598	chr17	-	735	3	ISM	ENSMUSG00000023927.16	ENST00000417717.6	4563	12	70012	1134	68251	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTCGGAAACTTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	52049696	52046819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_52047436_52049074_52049171_52049673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011599	chr17	-	728	2	ISM	ENSMUSG00000023927.16	ENSMUST00000140979.8	3748	12	310	69678	310	-69678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAACGGGAGCCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	52119398	52116181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_52116307_52118795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011600	chr17	+	1551	4	ISM	ENSMUSG00000017831.9	ENST00000422242.1	897	5	13720	-881	13720	-164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAATCTACCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	53804575	53814544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_53804707_53805415_53805539_53807403_53807498_53813341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011601	chr17	+	1307	1	ISM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	27140	0	22546	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53813401	53814708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_53813400_53814700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011602	chr17	-	144	2	ISM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	2169	8782	2169	-8782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTCCTTACAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	53994192	53990595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_53990659_53994111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011603	chr17	-	150	2	ISM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	1546	12422	1546	-12422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAAAGTGAGAGAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	53994815	53994235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_53994309_53994738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011604	chr17	-	126	1	NIC	ENSMUSG00000023943.8	novel	1556	8	NA	NA	2573	7	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGGGAATCCCTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	54269215	54269089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_54269100_54269200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011605	chr17	-	291	2	ISM	ENSMUSG00000023943.8	ENST00000681802.2	525	4	2194	-5	2194	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAGAGGGAATCCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	54269594	54269091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_54269213_54269424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011606	chr17	-	379	3	ISM	ENSMUSG00000023943.8	ENST00000681802.2	525	4	0	358	0	-358	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTCTATATCTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54271788	54269454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_54269606_54271008_54271104_54271655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011607	chr17	-	217	2	NNC	ENSMUSG00000023943.8	novel	525	4	NA	NA	10	-1911	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTAGTGTGATCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	54271778	54271007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_54271104_54271657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011608	chr17	+	146	1	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCAAGAAACTAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	54728139	54728285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_54728100_54728300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011609	chr17	-	1183	1	ISM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	12856	0	12856	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTCTCTTGGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	56173074	56171891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56171900_56173100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011610	chr17	-	1227	3	ISM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	10259	706	10259	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTCAAATGCATGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56175671	56172597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56173651_56175302_56175364_56175558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011611	chr17	+	170	1	Genic_Genomic	ENSMUSG00000003198.11	novel	NA	NA	NA	NA	6643	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTTATGTGTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	56205762	56205932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_56205800_56205900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011612	chr17	-	661	1	Genic_Genomic	ENSMUSG00000062101.13	novel	NA	NA	NA	NA	6226	8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATGTTGTCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	56246033	56245372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_56245400_56246000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011613	chr17	+	622	3	ISM	ENSMUSG00000003199.17	ENSMUST00000159996.8	1444	12	95	5542	95	-5535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGCCAGGGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	56316325	56318111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56316587_56317276_56317514_56317987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011614	chr17	+	495	4	ISM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	6041	0	6011	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAGTACAGTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	56322241	56323790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56322279_56322470_56322561_56322903_56322997_56323515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011615	chr17	+	278	1	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	7282	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAGTACAGTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	56323512	56323790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_56323500_56323800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011616	chr17	-	690	1	Genic_Genomic	ENSMUSG00000003200.11	novel	NA	NA	NA	NA	2024	1	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTCCCATCTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	56324438	56323748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_56323700_56324400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011617	chr17	-	960	4	ISM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	17956	314	783	200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGCTACTTATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	56325679	56324063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011618	chr17	-	835	6	FSM	ENSMUSG00000003200.11	ENST00000582245.1	898	6	63	0	63	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGACTGGGCCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	56326399	56324546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_56324776_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011619	chr17	-	662	6	ISM	ENSMUSG00000003200.11	ENST00000590010.1	726	7	16287	0	-710	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCCTCCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	56327172	56325573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56325675_56325799_56325963_56326039_56326174_56326315_56326460_56326925_56326996_56327122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011620	chr17	+	2365	2	ISM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	24753	739	24753	-739	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTGCCGCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	56372191	56376537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56372426_56374406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011621	chr17	-	1014	1	Genic_Genomic	ENSMUSG00000019578.12	novel	NA	NA	NA	NA	6972	2	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCTTTCTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56375056	56374042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_56374000_56375100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011622	chr17	-	1433	4	ISM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	5416	705	5416	-705	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTCAGATGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	56376612	56374749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011623	chr17	+	978	2	NNC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	27414	-1171	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGCAGGGTACAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	56374852	56376105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_56375680_56375954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011624	chr17	+	2315	1	Genic_Genomic	ENSMUSG00000002835.10	novel	NA	NA	NA	NA	27531	8	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTGAGGAGCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	56374969	56377284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_56375000_56377300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011625	chr17	+	292	3	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	27	16958	27	-16958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCCTGGGAACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	56386750	56389415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56386827_56389099_56389177_56389276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011626	chr17	+	420	3	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	2375	5649	2375	-5649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGAAGAGGGTAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	56389098	56400724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56389177_56389276_56389416_56400521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011627	chr17	+	388	3	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	13797	3097	13797	-3097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGTTCTGTGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	56400520	56403276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56400723_56403016_56403131_56403204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011628	chr17	+	357	3	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	16291	2357	16291	-2357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACCTGAGCCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	56403014	56404016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56403131_56403204_56403277_56403847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011629	chr17	+	321	3	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	16477	2210	16477	-2210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTCACCCAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	56403200	56404163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56403277_56403847_56404017_56404087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011630	chr17	+	487	3	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	17196	3075	17171	-1850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGTGGTGCCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	56403894	56404523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56404017_56404087_56404164_56404234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011631	chr17	+	365	2	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	17543	1387	17543	-1387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATCTGTCCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	56404266	56404986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56404527_56404881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011632	chr17	+	287	4	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	18173	347	18173	-347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCAGATTCTTCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	56404896	56406026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56404986_56405483_56405558_56405682_56405754_56405973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011633	chr17	+	316	2	ISM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	19247	-14	19247	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGCTGCCTGCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	56405970	56406387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56406076_56406176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011634	chr17	+	340	2	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	19476	613	19451	-607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCCTGGGACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	56406174	56406985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56406388_56406858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011635	chr17	+	389	2	ISM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	20159	-7	20134	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	56406857	56407605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56406986_56407344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011636	chr17	+	261	1	Genic_Genomic	ENSMUSG00000002833.12	novel	NA	NA	NA	NA	20621	7	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTTATTGGCTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	56407344	56407605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_56407300_56407600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011637	chr17	+	576	1	Genic_Genomic	ENSMUSG00000044469.9	novel	NA	NA	NA	NA	10904	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTGGCTGTCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	56480380	56480956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_56480400_56481000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011638	chr17	-	537	1	Genic_Genomic	ENSMUSG00000019579.14	novel	NA	NA	NA	NA	7648	8	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTGAAGCCAAAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	56483272	56482735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_56482700_56483300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011639	chr17	-	908	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	23	779	23	-779	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAATAGCAGCAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	56490897	56483522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011640	chr17	-	631	2	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	30528	108	30528	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCTCCTCACTTAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	56495361	56493924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56494462_56495267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011641	chr17	-	1576	1	ISM	ENSMUSG00000047123.9	ENSMUST00000058136.9	2992	2	5892	0	5892	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTAGGCTACGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	56577894	56576318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56576300_56577900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011642	chr17	-	708	1	Genic_Genomic	ENSMUSG00000024197.11	novel	NA	NA	NA	NA	8467	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTAATCTCACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	56585182	56584474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_56584500_56585200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011643	chr17	-	1289	4	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	2217	-319	2217	319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCACATCACAAATTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	56591432	56586410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011644	chr17	-	701	2	NNC	ENSMUSG00000024197.11	novel	1220	6	NA	NA	5781	233	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATGAATAGTGATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	56587868	56586496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_56587071_56587741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011645	chr17	-	246	1	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	10540	2250	6678	4	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGGGCCAACATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	56586971	56586725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56586700_56587000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011646	chr17	-	463	3	ISM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	8	4482	8	-4482	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCGGAGTGGACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	56593641	56591211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56591394_56593208_56593296_56593447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011647	chr17	+	404	2	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	17720	785	17720	-785	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTGTCCAAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	56629067	56629701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56629126_56629355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011648	chr17	+	445	1	ISM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	76346	0	76329	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	56709419	56709864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56709400_56709900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011649	chr17	-	552	2	ISM	ENSMUSG00000013236.18	ENSMUST00000086828.10	5608	29	48349	550	48349	-548	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCCGGTCAAAACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	56720867	56719980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56720394_56720728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011650	chr17	-	906	4	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	5636	-12481	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGACGTCCCTGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	56885949	56882419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_56883013_56884825_56884906_56885640_56885845_56885920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011651	chr17	+	153	2	ISM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	3721	12539	3721	-12464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATCACCTTTTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	56895779	56900755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56895867_56900689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011652	chr17	+	166	2	ISM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	15828	5166	15828	-5091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTCCTGCAGAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	56907886	56908128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56907972_56908047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011653	chr17	+	162	2	ISM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	16016	4962	16016	-4887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTTCAGAGCGCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	56908074	56908332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56908131_56908226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011654	chr17	+	150	2	ISM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	20753	221	20753	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGATGCCCGCTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	56912811	56913073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_56912864_56912975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011655	chr17	-	755	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	5	-5	5	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTGGATAGGAAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	56916766	56914446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011656	chr17	+	384	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTGTGTATGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	56920415	56921244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011657	chr17	-	149	1	ISM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	12348	94	12070	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACACAGGGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	56921539	56921390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56921400_56921500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011658	chr17	-	200	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	11882	65	11882	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATCGGGACATATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	56921727	56921455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56921564_56921635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011659	chr17	-	192	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	11674	280	11674	-280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGGGTGGCATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	56921935	56921670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56921801_56921873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011660	chr17	-	200	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	11261	600	11261	-600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGATGAAAGAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	56922348	56921990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56922092_56922249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011661	chr17	-	172	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	11026	933	11026	-933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCACAGTGGAGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	56922583	56922323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56922416_56922503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011662	chr17	-	179	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	10606	1153	10606	-1153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGTGGTGTGCGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	56923003	56922543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56922645_56922925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011663	chr17	-	212	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	10385	1535	10385	-1535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGGGGTTCTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	56923224	56922925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56923043_56923129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011664	chr17	-	165	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	10175	1773	10175	-1773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTACCTGGATGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	56923434	56923163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56923253_56923358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011665	chr17	-	220	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	8728	1964	8728	-1964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGCTCTGGGGACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	56924881	56923354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56923447_56924753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011666	chr17	-	160	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	8250	3424	8250	-3424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATACTTCCGTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	56925359	56924814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56924933_56925317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011667	chr17	-	222	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	7322	3960	7322	-3960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGGCATGGAGGATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	56926287	56925350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56925457_56926171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011668	chr17	-	171	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	6544	4911	6544	-4911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGATGCCATTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	56927065	56926301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56926393_56926985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011669	chr17	-	196	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	6252	5618	6252	-5618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCAACGCCTAGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	56927357	56927008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56927070_56927222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011670	chr17	-	181	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	6045	5832	6045	-5832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGTGATCCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	56927564	56927222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56927353_56927513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011671	chr17	-	220	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	4480	6123	4480	-6123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTCTGCAGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	56929129	56927513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56927576_56928971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011672	chr17	-	150	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	3382	8104	3382	-8104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCATGAGATGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	56930227	56929494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56929554_56930136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011673	chr17	-	187	2	ISM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	20	8757	20	-8757	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGACAAGTAAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	56933589	56930147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_56930226_56933480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011674	chr17	-	1072	1	Genic_Genomic	ENSMUSG00000054723.7	novel	NA	NA	NA	NA	1971	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTCTACCTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	57022006	57020934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_57020900_57022000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011675	chr17	-	1091	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	117	1018	117	-1018	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCGTGCCCTGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57023860	57021953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_57022818_57023633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011676	chr17	+	548	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTTAAAGGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	57024765	57029139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011677	chr17	+	490	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	4	-1	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTAAAGGCAGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	57024786	57029142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_57024943_57028034_57028128_57028358_57028442_57028984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011678	chr17	+	156	2	ISM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	3086	1724	3086	-1724	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTGCCCCATCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	57074863	57075117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57074936_57075033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011679	chr17	+	149	2	ISM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	3292	1426	3292	-1426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGCTCTTGAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57075069	57075415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57075151_57075347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011680	chr17	+	157	2	ISM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	3590	1213	3590	-1213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGTCGGGCAGTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	57075367	57075628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57075414_57075517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011681	chr17	+	151	2	ISM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	4050	716	4050	-716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGCAGCTGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	57075827	57076125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57075903_57076049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011682	chr17	+	175	2	ISM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	4271	494	4271	-494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTACGGTTTAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	57076048	57076347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57076126_57076249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011683	chr17	+	237	2	ISM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	4754	0	4754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	57076531	57076841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57076663_57076735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011684	chr17	+	374	3	ISM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	6	4796	6	-4796	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGGACAGCCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	57297310	57298392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57297514_57297605_57297678_57298293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011685	chr17	+	360	3	ISM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	300	3173	300	-3173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGCTTTCTGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	57297604	57300015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57297678_57298293_57298391_57299825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011686	chr17	+	373	3	ISM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	1014	2628	1014	-2628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCCTCCCACAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	57298318	57300560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57298391_57299825_57300014_57300447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011687	chr17	+	539	3	ISM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	2557	30	2557	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTAAATCTTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	57299861	57303158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57300014_57300447_57300554_57302877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011688	chr17	+	305	1	ISM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	5579	0	5579	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	57302883	57303188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57302900_57303200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011689	chr17	+	186	2	ISM	ENSMUSG00000002661.15	ENSMUST00000074141.14	736	3	158	526	154	-526	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTTAAGGTACGACGTA	NA	NA	NA	NA	NA	NA	NA	NA	57304496	57305785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57304568_57305670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011690	chr17	+	681	3	ISM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	1075	-18	1075	18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCCTTTCCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57305417	57306340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57305563_57305670_57305796_57305929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011691	chr17	+	177	1	Genic_Genomic	ENSMUSG00000002661.15	novel	NA	NA	NA	NA	1821	18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCCTTTCCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57306163	57306340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_57306200_57306300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011692	chr17	-	527	4	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	7098	-1	7098	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGCGAGTCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	57311190	57310403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011693	chr17	-	488	5	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	6714	316	6714	-316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTCAGACAGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57311574	57310720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011694	chr17	-	677	4	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	3409	1261	3409	-1261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCACAGGCAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57314879	57311665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57311820_57312359_57312545_57313985_57314157_57314712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011695	chr17	-	443	3	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	1524	3580	1524	-3580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCAAAGGTGGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	57316764	57313984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57314157_57314712_57314907_57316687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011696	chr17	-	439	4	ISM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	42	4321	42	-4321	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGGACGGAAGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	57318246	57314725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57314907_57316687_57316761_57317975_57318023_57318108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011697	chr17	-	1554	2	ISM	ENSMUSG00000079414.4	ENSMUST00000233454.2	1560	3	2433	-14	2044	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATATCTGTTAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	57410489	57398355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57399770_57410349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011698	chr17	+	219	2	ISM	ENSMUSG00000035678.9	ENSMUST00000039490.9	1290	3	924	536	924	-536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCAGGGCTGGGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	57413248	57414221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57413287_57414040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011699	chr17	+	211	1	Genic_Genomic	ENSMUSG00000035678.9	novel	NA	NA	NA	NA	2225	3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTTTATTATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	57414549	57414760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_57414500_57414800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011700	chr17	-	917	3	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	8861	-635	8861	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAAGATCTGTGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	57543239	57541658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57542367_57542922_57543048_57543155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011701	chr17	-	133	2	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	8678	862	8678	-862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAAGGTGGAGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	57543422	57543155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57543240_57543373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011702	chr17	-	221	3	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	8096	1087	8096	-1087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATGGTAGGAGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	57544004	57543380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57543424_57543696_57543741_57543870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011703	chr17	-	227	2	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	7801	1575	7801	-1575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACCTGGACCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	57544299	57543868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57544002_57544205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011704	chr17	-	270	3	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	7174	1910	7174	-1910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGGGGAGGGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57544926	57544203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57544324_57544423_57544498_57544850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011705	chr17	-	280	3	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	6937	2134	6937	-2134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGAGTCGCCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57545163	57544427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57544498_57544850_57544927_57545029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011706	chr17	-	231	2	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	2262	2744	2262	-2744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACACGTAAAGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	57549838	57545037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57545164_57549733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011707	chr17	-	204	2	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	2065	7436	2065	-7436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCGGGATAAGTGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	57550035	57549729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57549839_57549940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011708	chr17	-	167	2	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	801	7647	801	-7647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATCTGCCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	57551299	57549940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57550051_57551242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011709	chr17	-	198	2	ISM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	1	8948	1	-8948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGGCCTGCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	57552099	57551241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_57551369_57552028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011710	chr17	+	217	3	ISM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	5952	2092	5859	-1813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGGGACCCTGCCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57562406	57568335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_57562468_57564234_57564345_57568289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011711	chr17	+	179	1	Genic_Genomic	ENSMUSG00000019487.12	novel	NA	NA	NA	NA	13940	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCGTGTGGAATAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	57570487	57570666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_57570500_57570700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011712	chr17	-	650	5	ISM	ENSMUSG00000024227.15	ENST00000412514.2	971	7	31799	0	-29208	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAGCGGTAAGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	59229698	59187610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_59187738_59190899_59191087_59192854_59192898_59195002_59195161_59229563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011713	chr17	-	539	5	ISM	ENSMUSG00000024227.15	ENST00000412514.2	971	7	22028	3372	22028	-3372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGTGGATCCAACACT	NA	NA	NA	NA	NA	NA	NA	NA	59239469	59190982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_59191087_59192854_59192898_59195002_59195161_59229563_59229737_59239408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011714	chr17	-	920	1	ISM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	12835	0	10718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTAGCACATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59307532	59306612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_59306600_59307500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011715	chr17	-	1350	6	FSM	ENSMUSG00000024228.13	ENST00000507423.1	1344	6	0	-6	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGCCTCTGTTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	59318250	59309167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011716	chr17	-	1585	1	Genic_Genomic	ENSMUSG00000048915.13	novel	NA	NA	NA	NA	275380	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGTCTTTTGTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	62912759	62911174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_62911200_62912800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011717	chr17	-	2013	4	ISM	ENSMUSG00000048915.13	ENSMUST00000076840.12	4032	5	230180	1710	230007	1425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGTGGTATCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	62958132	62912888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_62914459_62920310_62920392_62920831_62920898_62957836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011718	chr17	+	724	6	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	47520	97169	15513	-97169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAAGAACCACCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	64218529	64248414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011719	chr17	+	722	6	ISM	ENSMUSG00000000127.16	ENSMUST00000232945.2	2948	15	59382	57013	-14575	-57013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCAAGGAGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	64230391	64288570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011720	chr17	+	1008	4	ISM	ENSMUSG00000000127.16	ENSMUST00000038080.7	2068	14	140928	-331	140928	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCAGAACAAGCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	64385894	64446523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_64385971_64440435_64440591_64444704_64444828_64445869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011721	chr17	+	657	1	Genic_Genomic	ENSMUSG00000000127.16	novel	NA	NA	NA	NA	200901	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCAGAACAAGCCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	64445867	64446524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_64445900_64446500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011722	chr17	-	1464	1	ISM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	49448	0	30563	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGTGTGACCCTATC	NA	NA	NA	NA	NA	NA	NA	NA	64589463	64587999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_64588000_64589500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011723	chr17	-	1468	2	ISM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	25980	1116	25980	-1102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGAATTTGTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	64594046	64589116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_64590534_64593995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011724	chr17	-	1456	1	Genic_Genomic	ENSMUSG00000024091.10	novel	NA	NA	NA	NA	33774	1	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGAGACTTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	65886776	65885320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_65885300_65886800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011725	chr17	-	1911	5	ISM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	18498	1125	18498	-1125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCTGAAAAGAATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	65902052	65886446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011726	chr17	-	1115	2	FSM	ENSMUSG00000050612.7	ENST00000357775.6	1108	2	-6	-1	-6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACTCGTTGATAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	65945658	65944503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_65944864_65944903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011727	chr17	-	1104	2	NNC	ENSMUSG00000050612.7	novel	1108	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCAACTCGTTGATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	65945654	65944504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_65944858_65944903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011728	chr17	-	1148	1	ISM	ENSMUSG00000050612.7	ENSMUST00000050236.7	1861	3	3511	3	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCAACTCGTTGATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	65945652	65944504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_65944500_65945700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011729	chr17	-	914	1	ISM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	120110	0	119998	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	65959637	65958723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_65958700_65959600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011730	chr17	-	1174	4	ISM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	74689	1891	74577	-1891	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATTGCAGTGAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	66005058	65960614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011731	chr17	-	1214	3	ISM	ENSMUSG00000024096.18	ENSMUST00000233054.2	2370	8	15016	-189	15016	189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAAACCAGAGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	66159809	66156225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66157191_66159114_66159239_66159684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011732	chr17	-	1002	4	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	20310	9257	3186	-8255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAAAGACAAGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	66171639	66164669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66164789_66165967_66166130_66168250_66168601_66171268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011733	chr17	-	1110	3	ISM	ENSMUSG00000024096.18	ENSMUST00000233054.2	2370	8	-2	11836	-2	-11836	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTCCTGTCCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	66174827	66168250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66168601_66171268_66171728_66174526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011734	chr17	-	985	3	ISM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	51	15855	51	-14853	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGGACGTGAAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	66191898	66171267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66171728_66174526_66174826_66191672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011735	chr17	-	279	1	ISM	ENSMUSG00000024098.7	ENSMUST00000024906.6	4086	5	27883	0	27772	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGTTTTTTATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	66230338	66230059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66230100_66230300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011736	chr17	-	1272	2	ISM	ENSMUSG00000034647.16	ENSMUST00000038116.13	10821	13	104703	3442	104703	-3442	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAATATATGTAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	66279365	66276134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66277333_66279291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011737	chr17	-	552	1	Genic_Genomic	ENSMUSG00000024099.16	novel	NA	NA	NA	NA	22314	8	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAATAGTGCCGTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	66386176	66385624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_66385600_66386200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011738	chr17	-	1015	5	ISM	ENSMUSG00000024099.16	ENSMUST00000024909.15	927	9	12145	-393	12145	393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTCCATTTATGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	66396345	66386042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011739	chr17	-	531	6	ISM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	107	4792	43	-3989	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCGATGGTTCAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	66408447	66390424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011740	chr17	+	469	3	ISM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	6414	214	2402	98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGCAGGTGTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	66425053	66426228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_66425217_66425805_66425875_66425991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011741	chr17	+	424	1	ISM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	7480	1055	3368	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGGAGCTGTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66426019	66426443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_66426000_66426400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011742	chr17	+	594	1	Genic_Genomic	ENSMUSG00000024101.16	novel	NA	NA	NA	NA	4255	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	66426906	66427500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_66426900_66427500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011743	chr17	-	1172	1	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	100238	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTCTTGGTGTCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	66645150	66643978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_66644000_66645200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011744	chr17	-	2484	3	ISM	ENSMUSG00000052105.18	ENST00000359865.7	5953	15	94309	-9	94309	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAGGGTCTTGGTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	66651079	66643981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66645150_66647478_66647536_66649820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011745	chr17	-	1977	5	ISM	ENSMUSG00000052105.18	ENST00000359865.7	5953	15	80200	6131	80200	-2625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACAGGAGCTGGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	66665188	66650121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011746	chr17	-	1229	2	NNC	ENSMUSG00000052105.18	novel	5680	14	NA	NA	89979	-2817	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCAAATAGCAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	66655409	66650313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_66651361_66655227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011747	chr17	-	1243	2	NIC	ENSMUSG00000052105.18	novel	5441	16	NA	NA	89926	-2870	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAAAGTACGGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66655462	66650366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_66651361_66655213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011748	chr17	-	1730	4	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	58687	30552	58048	-27728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACGCCTCCCACCCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	66687340	66675224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66675456_66678317_66678441_66684847_66685007_66686123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011749	chr17	-	1454	3	ISM	ENSMUSG00000052105.18	ENSMUST00000177034.2	5441	16	2792	41526	2153	-38702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCACTGTGACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	66743235	66686198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66687432_66692854_66692915_66743074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011750	chr17	+	1412	1	FSM	ENSMUSG00000117003.2	ENSMUST00000233518.2	2746	1	1336	-2	1336	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTGCTTTGACTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	66758184	66759596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_66758200_66759600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011751	chr17	-	884	1	ISM	ENSMUSG00000023460.14	ENSMUST00000167962.2	2010	6	24275	0	24275	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTTGCCGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	66802390	66801506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66801500_66802400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011752	chr17	-	470	2	ISM	ENSMUSG00000023460.14	ENSMUST00000167962.2	2010	6	22267	882	22267	-882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTTGTTAATTACACTA	NA	NA	NA	NA	NA	NA	NA	NA	66804398	66802388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_66802799_66804338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011753	chr17	-	319	4	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	38780	0	38780	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATTGTTCAATAATCT	NA	NA	NA	NA	NA	NA	NA	NA	68164481	68156046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68156113_68159905_68160031_68162428_68162486_68164410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011754	chr17	-	358	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	37913	6395	37913	-6395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGAAGAATGGTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	68165348	68162441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68162486_68164410_68164525_68165148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011755	chr17	-	389	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	34911	8370	34911	-8370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGGTGAGAGCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	68168350	68164416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68164525_68165148_68165347_68168267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011756	chr17	-	399	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	31639	9149	31639	-9149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATCATCCGCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	68171622	68165195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68165347_68168267_68168351_68171457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011757	chr17	-	327	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	24484	15419	24484	-15419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAAAGTAGGTGACGAA	NA	NA	NA	NA	NA	NA	NA	NA	68178777	68171465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68171621_68175945_68176024_68178683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011758	chr17	-	331	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	24218	19904	24218	-19904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTACTCAGTGATATC	NA	NA	NA	NA	NA	NA	NA	NA	68179043	68175950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68176024_68178683_68178776_68178877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011759	chr17	-	400	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	23102	22637	23102	-22637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCCCTGGGCAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	68180159	68178683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68178776_68178877_68179044_68180017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011760	chr17	-	395	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	20607	22831	20607	-22831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTATGAGACCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	68182654	68178877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68179044_68180017_68180161_68182568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011761	chr17	-	316	3	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	14743	23971	14743	-23971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACCCCCTGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	68188518	68180017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68180161_68182568_68182654_68188430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011762	chr17	-	269	2	ISM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	28	35678	28	-35678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACCTCTGGTAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	68203233	68191724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_68191804_68203043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011763	chr17	-	449	1	FSM	ENSMUSG00000090224.2	ENSMUST00000159103.2	531	1	82	0	82	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGGACCATTTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	68678723	68678274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_68678300_68678700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011764	chr17	+	513	3	ISM	ENSMUSG00000024044.20	ENSMUST00000233509.2	2736	20	-14	49284	-14	-49284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCAGAAGGTGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	69514850	69545433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69515072_69517180_69517379_69545339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011765	chr17	+	401	3	ISM	ENSMUSG00000024044.20	ENSMUST00000233509.2	2736	20	39664	34235	39664	-34235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTCTTAAAAATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	69554528	69560482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69554750_69555624_69555713_69560390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011766	chr17	+	342	3	ISM	ENSMUSG00000024044.20	ENSMUST00000233509.2	2736	20	40757	30254	40757	-30254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGAAGCAAATATTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	69555621	69564463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69555713_69560390_69560544_69564365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011767	chr17	+	318	3	ISM	ENSMUSG00000024044.20	ENSMUST00000233509.2	2736	20	45524	28645	45524	-28645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAACCCAGGCGCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	69560388	69566072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69560544_69564365_69564464_69566007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011768	chr17	+	399	2	ISM	ENSMUSG00000024044.20	ENSMUST00000232706.2	2439	17	51141	25376	51141	-25376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGCTCCCGGCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	69566005	69569341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69566184_69569120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011769	chr17	+	569	3	ISM	ENSMUSG00000024044.20	ENSMUST00000233509.2	2736	20	66832	2932	66832	-2932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGGCGAGGAGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	69581696	69591785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69581891_69590879_69591003_69591533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011770	chr17	+	449	3	ISM	ENSMUSG00000024044.20	ENSMUST00000233509.2	2736	20	76770	970	76770	-970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCAGACGATCACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	69591634	69593747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69591912_69592896_69593029_69593707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011771	chr17	+	383	2	ISM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	130767	208	79742	-208	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAAATGTCTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	69594606	69596111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69594724_69595845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011772	chr17	+	466	1	ISM	ENSMUSG00000024044.20	ENSMUST00000239167.2	4692	22	162524	0	81654	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	69596518	69596984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69596500_69597000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011773	chr17	+	286	1	ISM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	7073	1	7073	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATAGGCTATCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	69697907	69698193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_69697900_69698200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011774	chr17	+	898	4	ISM	ENSMUSG00000003279.18	ENSMUST00000097288.4	2861	10	156643	28902	156437	-28902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACCTCCCAGAAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	71025189	71094186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_71025221_71068069_71068441_71072992_71073085_71093782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011775	chr17	+	883	4	ISM	ENSMUSG00000003279.18	ENST00000539435.5	2306	11	225108	104	225108	16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTAGTTGTCCACCTCG	NA	NA	NA	NA	NA	NA	NA	NA	71093860	71125313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_71094205_71116182_71116275_71122188_71122342_71125019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011776	chr17	-	185	1	ISM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	5401	0	5401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATTTTCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	71151384	71151199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71151200_71151400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011777	chr17	-	328	2	ISM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	3456	903	3456	-897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAGCCCATTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	71153329	71152102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71152268_71153166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011778	chr17	-	304	2	ISM	ENSMUSG00000047407.18	ENSMUST00000186358.6	1455	3	46	2036	46	-2036	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATACAACGCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	71158018	71153241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71153394_71157866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011779	chr17	+	338	1	FSM	ENSMUSG00000100865.3	ENSMUST00000184151.3	473	1	165	-30	165	30	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCATGGAATAATTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	71182999	71183337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_71183000_71183300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011780	chr17	+	1043	2	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATGTAGTTGAAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	71233090	71301651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_71233136_71300653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011781	chr17	-	584	1	Genic_Genomic	ENSMUSG00000034868.10	novel	NA	NA	NA	NA	4817	1	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTGAGGTCTATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	71280710	71280126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_71280100_71280700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011782	chr17	-	1353	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	0	790	0	103	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCGATAGTGTGGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	71297885	71280917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011783	chr17	-	258	1	ISM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	16607	893	4249	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGGTTTTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	71281278	71281020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71281000_71281300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011784	chr17	-	257	2	ISM	ENSMUSG00000034868.10	ENSMUST00000233004.2	1001	4	50	3083	50	-3083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGAACCGGGATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	71285477	71284103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71284242_71285358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011785	chr17	-	1139	1	Genic_Genomic	ENSMUSG00000024048.16	novel	NA	NA	NA	NA	2522	9	mono-exon	FALSE	NA	NA	NA	NA	NA	1867	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTTAATCAGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	71301780	71300641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_71300600_71301800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011786	chr17	-	1895	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	1	41	1	-41	multi-exon	FALSE	canonical	NA	NA	NA	NA	2981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCAACCCTATAAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	71309548	71300691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011787	chr17	+	1102	2	Antisense	novelGene_ENSMUSG00000024048.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAAAGGAGCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	71300842	71303267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr17_+_71301776_71303098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011788	chr17	-	1080	2	NNC	ENSMUSG00000024048.16	novel	1937	4	NA	NA	1044	-212	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATAGTATTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71303258	71300862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_71301780_71303095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011789	chr17	-	1161	3	NNC	ENSMUSG00000024048.16	novel	1937	4	NA	NA	499	-231	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCCAGCTGTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	71303803	71300881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_71301769_71303104_71303267_71303691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011790	chr17	-	355	1	ISM	ENSMUSG00000024053.12	ENSMUST00000233057.2	3939	8	58464	0	58278	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCTTTTCTGTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	71559521	71559166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71559200_71559500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011791	chr17	-	405	2	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	55591	600	55591	-600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTACCCTTTCCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	71562208	71559778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71560089_71562113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011792	chr17	-	2205	3	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	35698	2934	35698	-2934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATCTACAGTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	71582101	71562112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71562285_71563318_71563619_71580368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011793	chr17	-	670	2	ISM	ENSMUSG00000024053.12	ENSMUST00000232777.2	3873	8	37255	4180	37100	-4170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCGGAAGGCTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	71580699	71563348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71563688_71580368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011794	chr17	-	1999	3	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	546	21391	546	-21391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAGTCTGCAGAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	71617253	71580569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71582283_71587668_71587845_71617143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011795	chr17	-	161	1	Genic_Genomic	ENSMUSG00000024056.11	novel	NA	NA	NA	NA	30548	1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCCTCCCATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	71803254	71803093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_71803100_71803300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011796	chr17	-	416	3	ISM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	26453	74	26403	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATTATGATAATATGGT	NA	NA	NA	NA	NA	NA	NA	NA	71807399	71803168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71803349_71806261_71806365_71807266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011797	chr17	-	224	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	25206	4133	25206	-4133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTCACCTCACTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71808596	71807266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71807398_71808503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011798	chr17	-	294	3	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	19438	5369	19438	-5369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACCTGACCCGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	71814364	71808502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71808597_71811760_71811851_71814254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011799	chr17	-	255	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	18140	11119	18140	-11119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGTGTTTCAATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	71815662	71814252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71814408_71815562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011800	chr17	-	259	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	15317	12522	15317	-12522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAGACTATTAATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	71818485	71815655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71815769_71818339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011801	chr17	-	195	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	14361	15210	14361	-15210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGTAAGCAAAACTAATG	NA	NA	NA	NA	NA	NA	NA	NA	71819441	71818343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71818485_71819387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011802	chr17	-	280	3	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	9185	16254	9185	-16254	internal_fragment	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTAAACATGTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	71824617	71819387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71819495_71821183_71821278_71824538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011803	chr17	-	178	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	7968	21419	7968	-21419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACACAATAAGGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	71825834	71824552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71824629_71825732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011804	chr17	-	222	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	5902	22626	5902	-22626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGGCTCATAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	71827900	71825759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71825836_71827754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011805	chr17	-	221	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	5654	24699	5654	-24699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTCTGTGCCCGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	71828148	71827832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71827928_71828022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011806	chr17	-	197	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	3144	24898	3144	-24898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTATGAGGTATTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	71830658	71828031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71828147_71830576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011807	chr17	-	163	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	1066	27467	1066	-27467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTCAATATTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	71832736	71830600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71830655_71832627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011808	chr17	-	186	2	ISM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	21	29494	21	-29494	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGCCTCCCCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	71833781	71832627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_71832738_71833705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011809	chr17	+	724	3	ISM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	37265	925	37265	-925	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCGGCACGTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	71960474	71965101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_71960518_71964335_71964386_71964470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011810	chr17	+	678	1	Genic_Genomic	ENSMUSG00000041057.11	novel	NA	NA	NA	NA	42140	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGTCTCGTGGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	71965349	71966027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_71965300_71966000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011811	chr17	+	394	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	345	40283	345	-40283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACTCAAGAAGAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	71992144	71996380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_71992188_71994580_71994695_71996143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011812	chr17	+	359	2	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	4422	38994	4422	-38994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACCTGGACCCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	71996221	71997669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_71996432_71997520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011813	chr17	+	314	2	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	13030	29012	13030	-29012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTAATGCCTTGGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	72004829	72007651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_72004992_72007499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011814	chr17	+	357	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	15813	24827	15813	-24827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGAGGCCTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	72007612	72011836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_72007651_72007874_72008040_72011682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011815	chr17	+	315	2	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	20997	22358	20997	-22358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTATGTGCTGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	72012796	72014305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_72012880_72014073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011816	chr17	-	302	2	Antisense	novelGene_ENSMUSG00000045761.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGCTGGATGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	72014309	72012815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr17_-_72012887_72014078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011817	chr17	+	308	3	ISM	ENSMUSG00000045761.17	ENSMUST00000153445.9	3301	20	24768	14896	24768	-14896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGCTGTTCTTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72016567	72021767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_72016663_72021230_72021349_72021672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011818	chr17	+	415	3	ISM	ENSMUSG00000045761.17	ENST00000379558.5	3451	20	40860	13152	29427	-13149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCGCACCCACGCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	72021226	72023514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_72021349_72021672_72021768_72023316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011819	chr17	+	272	1	ISM	ENSMUSG00000045761.17	ENST00000379558.5	3451	20	56028	0	44595	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTTCTCTTACACTA	NA	NA	NA	NA	NA	NA	NA	NA	72036394	72036666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_72036400_72036700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011820	chr17	+	284	2	ISM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	210	4762	210	-2401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAACAAGGTTGGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	73143657	73153428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_73143787_73153273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011821	chr17	+	852	3	NNC	ENSMUSG00000039770.7	novel	2419	3	NA	NA	48	307	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAGAATATGTCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	73144578	73156136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_73144704_73153273_73153443_73155578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011822	chr17	+	580	1	ISM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	13406	757	12323	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACAGAACTGCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	73156853	73157433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_73156900_73157400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011823	chr17	+	272	1	Genic_Genomic	ENSMUSG00000039770.7	novel	NA	NA	NA	NA	13406	18	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGATTCATTAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	73157936	73158208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_73157900_73158200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011824	chr17	+	1174	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	102	1793	102	-1793	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGGGACCTGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	73225401	73247149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_73225574_73228182_73228286_73246250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011825	chr17	+	980	1	ISM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	22663	0	22663	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGGGTTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	73247962	73248942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_73248000_73248900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011826	chr17	+	263	2	ISM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	88683	3507	88683	-3507	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGAGGACCTTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	73503671	73546856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_73503791_73546712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011827	chr17	+	252	1	ISM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	135123	0	135123	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73550111	73550363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_73550100_73550400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011828	chr17	+	287	2	ISM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	11379	11518	11379	-11518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGACAAGTGACGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	74123214	74127571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_74123403_74127472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011829	chr17	+	273	2	ISM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	22519	3979	22519	-3979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTGGTGAACAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	74134354	74135110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_74134558_74135040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011830	chr17	+	274	2	ISM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	23230	2043	23230	-2043	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGATGGTGAAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	74135065	74137046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_74135206_74136912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011831	chr17	+	262	1	ISM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	26992	0	26992	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGGTGACTGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	74138827	74139089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_74138800_74139100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011832	chr17	-	216	1	ISM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	95612	0	95539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGTTTGTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	74506246	74506030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_74506000_74506200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011833	chr17	-	785	4	ISM	ENSMUSG00000058704.10	ENST00000426310.6	1282	8	69307	0	69226	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAGGGTGGAAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74532559	74507850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011834	chr17	-	256	2	ISM	ENSMUSG00000058704.10	ENST00000426310.6	1282	8	52856	24574	52775	-24574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTAGTTTTAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	74549010	74532424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_74532570_74548899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011835	chr17	-	218	2	ISM	ENSMUSG00000058704.10	ENST00000426310.6	1282	8	49784	41056	49703	-41056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGGTATATTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	74552082	74548906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_74549012_74551969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011836	chr17	-	234	3	ISM	ENSMUSG00000058704.10	ENSMUST00000078459.8	1400	9	36315	44273	36315	-44119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTATATAGAAATCATA	NA	NA	NA	NA	NA	NA	NA	NA	74565470	74551969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_74552083_74562222_74562292_74565418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011837	chr17	-	297	3	ISM	ENSMUSG00000058704.10	ENSMUST00000232989.2	1210	7	-36	54526	26	-54372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATGCAGTTAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	74601832	74562222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_74562292_74565418_74565501_74601686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011838	chr17	-	356	1	Genic_Genomic	ENSMUSG00000024067.15	novel	NA	NA	NA	NA	16377	3	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATATGACAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	74606821	74606465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_74606500_74606800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011839	chr17	-	578	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	86	30	86	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTTCAAAATAAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	74623112	74606506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011840	chr17	-	324	4	ISM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	59	8246	4	-8064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGCGTGTCGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74623399	74614714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_74614858_74622896_74622945_74623038_74623112_74623339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011841	chr17	-	198	2	ISM	ENSMUSG00000024067.15	ENSMUST00000164832.9	789	5	61	16558	61	-16386	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGAGGCCCTGGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	74630878	74623036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_74623112_74630755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011842	chr17	+	1129	6	ISM	ENSMUSG00000024069.15	ENST00000435660.5	1521	12	8423	-7	8423	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATATGAGCTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	74717328	74730725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74730011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011843	chr17	+	922	2	ISM	ENSMUSG00000024069.15	ENSMUST00000179074.9	1938	14	23909	142	17619	32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGCCCAACTAAGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	74726524	74730862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_74726596_74730011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011844	chr17	+	1211	1	Genic_Genomic	ENSMUSG00000024069.15	novel	NA	NA	NA	NA	21101	1	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTTACAATCGTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	74730006	74731217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_74730000_74731200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011845	chr17	-	356	1	FSM	ENSMUSG00000117187.2	ENSMUST00000233026.2	355	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCCTAGGCCTACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	74745634	74745278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_74745300_74745600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011846	chr17	+	173	1	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTCACTGGAGAGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	74794910	74795083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_74794900_74795100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011847	chr17	+	2142	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	0	-9	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACAGGTAAAAGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	74796487	74807281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011848	chr17	-	1740	1	Genic_Genomic	ENSMUSG00000002017.11	novel	NA	NA	NA	NA	13038	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGAGTTTTCTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	75845819	75844079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_75844100_75845800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011849	chr17	-	1784	2	ISM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	12830	162	12746	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAAGCCTGGCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	75846111	75844242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_75845857_75845941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011850	chr17	-	1416	5	ISM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	15248	0	15200	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78710312	78685313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011851	chr17	-	717	5	ISM	ENSMUSG00000056121.17	ENST00000405912.8	1042	7	5119	3136	5111	-3136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCGAAGGCAAATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	78720401	78692172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011852	chr17	-	770	5	ISM	ENSMUSG00000056121.17	ENST00000405912.8	1042	7	39	19113	31	-19113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACACAAAGAGACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	78725481	78708149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78708328_78710168_78710311_78712156_78712274_78720288_78720402_78725261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011853	chr17	-	4345	1	ISM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	82939	0	34560	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATGTGCTCCTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78961686	78957341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78957300_78961700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011854	chr17	-	223	1	ISM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	81537	5524	33158	4	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGATACGGAAGACCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	78963088	78962865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78962900_78963100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011855	chr17	-	307	3	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	30822	1153	30822	-308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACACTAGCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	78965424	78963177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78963265_78964336_78964445_78965312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011856	chr17	-	362	3	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	28605	2368	28605	-1523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGCATCACTGCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	78967641	78964392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78964445_78965312_78965454_78967472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011857	chr17	-	367	3	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	26934	3352	26934	-2507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCATCTTTAACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	78969312	78965376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78965454_78967472_78967641_78969190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011858	chr17	-	297	3	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	24057	7181	24057	-6336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACGACGCTTACGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	78972189	78969205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78969313_78970489_78970538_78972047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011859	chr17	-	316	2	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	21557	10022	21557	-9177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATATTCTACTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	78974689	78972046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78972224_78974550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011860	chr17	-	282	2	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	18922	12526	18922	-11681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTAGCTGTTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	78977324	78974550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78974688_78977179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011861	chr17	-	281	2	ISM	ENSMUSG00000024077.16	ENST00000379213.3	2289	17	59078	14309	11400	-14309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCGCGTGGACCTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	78984846	78977178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78977324_78984710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011862	chr17	-	273	2	ISM	ENSMUSG00000024077.16	ENSMUST00000024881.14	2967	16	5853	22686	5853	-21841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGAGCACGCTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	78990393	78984710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78984847_78990256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011863	chr17	-	392	3	ISM	ENSMUSG00000024077.16	ENST00000379213.3	2289	17	17	36964	17	-36964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTCTGGTAAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	79043907	78999833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_78999897_79008278_79008383_79043682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011864	chr17	-	647	3	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	6797	3928	6797	-3928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTACCCTTCCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	79069696	79064289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_79064444_79067844_79068070_79069428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011865	chr17	-	632	3	ISM	ENSMUSG00000039414.11	ENSMUST00000233850.2	2158	10	5983	7492	5983	-7492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACCAGGTAGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	79070510	79067853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_79068070_79069428_79069696_79070361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011866	chr17	+	2114	3	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	6522	1252	6522	-1252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAAGCAGAGTTGACCG	NA	NA	NA	NA	NA	NA	NA	NA	79149539	79154485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79149659_79151247_79151330_79152572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011867	chr17	+	2145	1	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	10575	0	10575	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGTGTATGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79153592	79155737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79153600_79155700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011868	chr17	+	584	4	ISM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	1837	-5	1837	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTCTGCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79225782	79227740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79225902_79226484_79226530_79227187_79227273_79227405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011869	chr17	-	585	1	Genic_Genomic	ENSMUSG00000024081.10	novel	NA	NA	NA	NA	17477	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTCTATTAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	79227018	79226433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_79226400_79227000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011870	chr17	+	334	1	Genic_Genomic	ENSMUSG00000062691.11	novel	NA	NA	NA	NA	3459	3	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGGTCTGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79227404	79227738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_79227400_79227700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011871	chr17	-	761	3	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	2070	12384	2070	-12384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGACAGAGCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79242425	79238818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_79238926_79239538_79239771_79242003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011872	chr17	-	648	2	ISM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	92	16514	92	-16514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCATCGTGTCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	79244403	79242948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_79243497_79244303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011873	chr17	+	359	3	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	354	7792	353	-7792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATTAAAAGAACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	79244918	79247136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79245084_79245969_79246051_79247023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011874	chr17	+	386	3	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	2457	4188	2456	-4188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTGGGAAAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	79247021	79250740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79247135_79249497_79249712_79250681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011875	chr17	+	679	3	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	7805	264	7804	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCATGCCTTTAATCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	79252369	79254664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79252514_79253724_79253899_79254303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011876	chr17	+	982	1	Genic_Genomic	ENSMUSG00000024082.6	novel	NA	NA	NA	NA	9936	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTGTCTGTAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	79254501	79255483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_79254500_79255500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011877	chr17	-	2278	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	-5	-8	-5	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTCATTTATAGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	79662525	79641147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_79643146_79662245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011878	chr17	+	246	2	ISM	ENSMUSG00000036368.9	ENSMUST00000225357.2	2118	11	228	60777	228	-60239	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAACTCTGCCAGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	79922718	79928901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79922798_79928734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011879	chr17	+	747	3	ISM	ENSMUSG00000036368.9	ENST00000354545.8	1276	9	1	29909	1	-29909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAATTCGTCAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	79928733	79959231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79929202_79957730_79957906_79959127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011880	chr17	+	255	2	ISM	ENSMUSG00000036368.9	ENST00000417700.6	941	9	45844	-115	45844	115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCACTATGAGACAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	79979941	79989255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_79980003_79989061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011881	chr17	-	1193	2	ISM	ENSMUSG00000024087.5	ENSMUST00000024894.2	5128	3	1430	2879	1430	-2879	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACACATATCAACATGTA	NA	NA	NA	NA	NA	NA	NA	NA	80021040	80017260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80018111_80020697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011882	chr17	-	1180	2	ISM	ENSMUSG00000024087.5	ENSMUST00000024894.2	5128	3	68	6467	68	-6467	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGCCGAAAAGAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	80022402	80020848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80021742_80022115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011883	chr17	-	372	1	ISM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	47362	0	16031	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGTTCTGAAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	80156190	80155818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80155800_80156200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011884	chr17	-	1160	2	ISM	ENSMUSG00000059811.14	ENST00000419554.6	2370	13	43080	0	11833	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGAAGTAGTTTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80160388	80157497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80158223_80159953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011885	chr17	-	450	2	ISM	ENSMUSG00000059811.14	ENST00000419554.6	2370	13	-77	25736	7	-25119	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGAATAGTGTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80203545	80183233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80183476_80203337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011886	chr17	-	410	1	ISM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	32331	0	32331	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTAAGGCTGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	80337325	80336915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80336900_80337300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011887	chr17	-	393	2	ISM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	29586	762	29586	-762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGTTTCTAACATTATT	NA	NA	NA	NA	NA	NA	NA	NA	80340070	80337677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80337970_80339969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011888	chr17	-	416	4	ISM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	26791	3103	26791	-3103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGAAGCTCTCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	80342865	80340018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80340069_80340156_80340215_80341474_80341677_80342759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011889	chr17	-	414	3	ISM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	17660	5844	17660	-5844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTACTTGTCCTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	80351996	80342759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80342882_80346020_80346239_80351922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011890	chr17	-	442	2	ISM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	208	24076	208	-24076	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACCTTGTGGAGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	80369448	80360991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80361071_80369085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011891	chr17	-	718	1	Genic_Genomic	ENSMUSG00000024097.12	novel	NA	NA	NA	NA	6061	1	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATATTCAGTCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	80508225	80507507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_80507500_80508200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011892	chr17	-	1243	6	ISM	ENSMUSG00000024097.12	ENST00000446327.6	2386	7	1435	854	853	376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTAGCGGCTGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	80513433	80508362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011893	chr17	-	559	2	ISM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	5096	-234	4650	227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAGCATGAGTGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	80509636	80508511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_80509032_80509597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011894	chr17	+	1118	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	18	-2	18	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTCTATTCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80531887	80535928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_80532100_80533049_80533194_80535166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011895	chr17	+	762	1	Genic_Genomic	ENSMUSG00000055760.13	novel	NA	NA	NA	NA	3297	2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTCTATTCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80535166	80535928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_80535200_80535900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011896	chr17	+	468	3	ISM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	4257	-3	4257	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGAATTATGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	80601897	80604905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_80602006_80602941_80603079_80604682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011897	chr17	+	986	3	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	89	3966	76	-3966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGCCCGCGTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	83522796	83528520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_83523534_83527462_83527586_83528394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011898	chr17	+	890	2	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	8503	151	8490	-151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCCTGGAGGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	83531210	83532335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_83531386_83531620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011899	chr17	+	801	2	ISM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	8931	-1	8918	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAAATGCTCCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	83531638	83532487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_83532330_83532377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011900	chr17	+	466	1	FSM	ENSMUSG00000094256.3	ENSMUST00000077420.5	515	1	66	-17	66	17	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGACCTCAGCCCATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	83596040	83596506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_83596000_83596500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011901	chr17	+	648	6	ISM	ENSMUSG00000032624.17	ENST00000401738.3	3034	23	70530	36768	70389	-36768	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAATGTATACCTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	83729032	83748752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_83729165_83732686_83732861_83734651_83734785_83735620_83735678_83747459_83747584_83748724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011902	chr17	+	634	5	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	94736	23606	94736	-23530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGGAATCTTAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	83753379	83761990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011903	chr17	+	616	3	ISM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	122435	76	122435	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGTGAGTTAAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	83781078	83785520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_83781178_83784632_83784764_83785134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011904	chr17	-	834	1	Genic_Genomic	ENSMUSG00000024248.15	novel	NA	NA	NA	NA	11583	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1056	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTTTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83810176	83809342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_83809300_83810200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011905	chr17	-	1008	3	ISM	ENSMUSG00000024248.15	ENSMUST00000167741.9	1129	4	10098	-2	10098	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATGTTTTTAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83811661	83809360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_83810167_83811359_83811429_83811528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011906	chr17	-	1032	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	-3	47	-3	-31	multi-exon	TRUE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTGACCGGACTGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	83821762	83809393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_83810167_83811528_83811658_83821632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011907	chr17	-	753	2	ISM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	10091	207	10091	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTATTTGTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	83811668	83809553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_83810167_83811528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011908	chr17	-	718	2	NNC	ENSMUSG00000024248.15	novel	1076	3	NA	NA	10098	-216	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTGAGAGGAATGATA	NA	NA	NA	NA	NA	NA	NA	NA	83811661	83809578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_83810164_83811528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011909	chr17	+	494	3	ISM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	82758	109	80511	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACGCTTTTCAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	84096349	84100193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_84096472_84099081_84099231_84099970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011910	chr17	+	604	4	ISM	ENSMUSG00000055817.19	ENSMUST00000112352.10	2674	16	85492	826	83245	-826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTAACCCTGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	84099083	84112026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_84099231_84099970_84100194_84107478_84107566_84111879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011911	chr17	+	966	4	ISM	ENSMUSG00000055817.19	ENST00000405592.5	2217	16	84128	-2	84128	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTCTTGGCTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84099966	84128113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_84100194_84107478_84107566_84111879_84112027_84127608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011912	chr17	+	506	1	Genic_Genomic	ENSMUSG00000055817.19	novel	NA	NA	NA	NA	111769	2	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCTCTTGGCTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84127607	84128113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_84127600_84128100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011913	chr17	-	2350	1	Genic_Genomic	ENSMUSG00000045817.9	novel	NA	NA	NA	NA	1674	7	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGAGTAATGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	84493701	84491351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_84491400_84493700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011914	chr17	-	2356	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	87	1087	87	-1087	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGAAATAAGTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84495288	84492445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_84494585_84495071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011915	chr17	-	216	1	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	24162	5	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCACTTTGGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	85056598	85056382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_85056400_85056600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011916	chr17	-	416	3	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	21988	0	21988	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCATTGCACTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	85058772	85056387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85056597_85057935_85058022_85058651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011917	chr17	-	269	2	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	20886	2264	20886	-2264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCCTTGCAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	85059874	85058651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85058783_85059736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011918	chr17	-	328	3	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	19820	3349	19820	-3349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCTGACAGTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	85060940	85059736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85059875_85060537_85060620_85060832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011919	chr17	-	250	3	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	3660	15533	3660	-15533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCAATAAATGGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	85077100	85071920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85071974_85074420_85074540_85077022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011920	chr17	-	264	3	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	3226	18103	3226	-18103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGGAAACATATATAAACT	NA	NA	NA	NA	NA	NA	NA	NA	85077534	85074490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85074540_85077022_85077131_85077427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011921	chr17	-	255	2	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	2830	21040	2830	-21040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTGGTCTTGTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	85077930	85077427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85077534_85077781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011922	chr17	-	293	2	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	2343	21394	2343	-21394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTGCCTGTTTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	85078417	85077781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85077928_85078270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011923	chr17	-	273	2	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	1781	21883	1781	-21883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTCAGAATGTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	85078979	85078270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85078416_85078851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011924	chr17	-	248	3	ISM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	255	22464	255	-22464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGTTTATGCTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	85080505	85078851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_85078979_85079520_85079608_85080471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011925	chr17	+	1200	3	ISM	ENSMUSG00000061130.14	ENST00000345249.8	1675	5	46874	0	11230	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCCTGCGCATTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	85312337	85322021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_85312452_85312936_85312995_85320993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011926	chr17	+	1029	1	NIC	ENSMUSG00000061130.14	novel	2670	6	NA	NA	19885	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCCTGCGCATTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	85320992	85322021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_85321000_85322000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011927	chr17	+	746	5	FSM	ENSMUSG00000045038.15	ENST00000394874.1	746	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCGGTGTAAACCCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	86795584	86803816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_86795731_86798178_86798276_86800648_86800849_86803365_86803540_86803687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011928	chr17	+	745	5	NNC	ENSMUSG00000045038.15	novel	746	5	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGGTGTAAACCCGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	86795590	86803817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_86795731_86798178_86798276_86800648_86800853_86803365_86803540_86803687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011929	chr17	+	2479	3	ISM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	31581	843	68	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACAGCAGTCATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	87302090	87306654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_87302152_87302431_87302528_87304332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011930	chr17	-	518	2	FSM	ENSMUSG00000024145.7	ENST00000609270.1	554	2	36	0	36	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATTGTGGCTTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	87306384	87304688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_87304996_87306173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011931	chr17	-	311	1	NIC	ENSMUSG00000024145.7	novel	988	6	NA	NA	1421	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGATTGTGGCTTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	87304999	87304688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_87304700_87305000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011932	chr17	-	321	2	NNC	ENSMUSG00000024145.7	novel	554	2	NA	NA	67	-164	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGATTCCATAAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	87306353	87304852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_87304996_87306175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011933	chr17	+	2409	1	ISM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	34579	0	3066	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTACCTCAGGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87305088	87307497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_87305100_87307500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011934	chr17	+	849	3	ISM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	5456	145	5456	-145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCATTCCGTCAGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	87338433	87343093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_87338491_87341683_87341788_87342405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011935	chr17	+	718	1	Genic_Genomic	ENSMUSG00000024146.10	novel	NA	NA	NA	NA	9544	1	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTCTTCAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	87342521	87343239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_+_87342500_87343200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011936	chr17	+	1820	1	FSM	ENSMUSG00000071035.6	ENSMUST00000090731.7	885	1	153	-1088	153	1088	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTACACCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	87385851	87387671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_87385900_87387700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011937	chr17	+	2007	1	ISM	ENSMUSG00000037104.10	ENST00000306503.5	4255	2	28389	0	28031	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTGGGAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	87443137	87445144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_87443100_87445100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011938	chr17	-	2040	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCGGCTGGATTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	87573364	87561869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011939	chr17	-	499	1	ISM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	10780	214	2903	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTGACGTTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	87562583	87562084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_87562100_87562600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011940	chr17	-	652	3	FSM	ENSMUSG00000024150.13	ENST00000444761.6	660	3	10	-2	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATGACTGTGGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87590897	87563209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_87563486_87564574_87564735_87590681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011941	chr17	-	567	3	FSM	ENSMUSG00000024150.13	ENST00000649435.1	562	3	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACATGACTGTGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	87565490	87563210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_87563483_87564574_87564735_87565355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011942	chr17	-	552	3	NNC	ENSMUSG00000024150.13	novel	2038	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACATGACTGTGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	87565484	87563210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_-_87563486_87564586_87564735_87565355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011943	chr17	-	135	1	NIC	ENSMUSG00000024150.13	novel	2038	4	NA	NA	782	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGAGGAGGCAGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	87564704	87564569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_87564600_87564700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011944	chr17	-	519	3	ISM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	1538	2518	1508	-34	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAGCCATCACTCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	87571794	87564603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_87564735_87565355_87565518_87571568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011945	chr17	-	571	1	Genic_Genomic	ENSMUSG00000036438.15	novel	NA	NA	NA	NA	12907	6	mono-exon	FALSE	NA	NA	NA	NA	NA	1873	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCTGATTTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	87741377	87740806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr17_-_87740800_87741400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011946	chr17	-	1028	4	ISM	ENSMUSG00000036438.15	ENST00000456319.6	1160	6	10923	-3	10911	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATTTACCCAATTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	87743373	87740853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011947	chr17	-	1051	5	ISM	ENSMUSG00000036438.15	ENST00000456319.6	1160	6	4111	25	4099	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTGTTTTCCAATA	NA	NA	NA	NA	NA	NA	NA	NA	87750185	87740881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011948	chr17	-	754	5	FSM	ENSMUSG00000036438.15	ENST00000628793.2	1062	5	26	282	-2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCGTGGACTGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	87754365	87741094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_87741484_87742503_87742562_87743231_87743363_87750123_87750155_87754220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011949	chr17	-	486	2	ISM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	11635	51	11635	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTTTAGGAACTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	87742649	87741143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_87741484_87742503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011950	chr17	-	474	4	NIC	ENSMUSG00000036438.15	novel	1062	5	NA	NA	28	-229	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCCATGTTTTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87754335	87741321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_87741484_87742503_87742562_87743231_87743363_87754212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011951	chr17	-	610	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	0	595	0	-342	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTCTTGTACAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	87754363	87741434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011952	chr17	-	521	4	NIC	ENSMUSG00000036438.15	novel	1160	6	NA	NA	17	-1411	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCACAAGGGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	87754346	87742503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_-_87742640_87743031_87743139_87743218_87743363_87754212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011953	chr17	+	1839	4	FSM	ENSMUSG00000005370.5	ENST00000616033.4	3167	4	-91	1419	-4	-1419	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACTATCCTCCAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	88282485	88293001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_88282823_88287618_88287819_88290872_88291047_88291873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011954	chr17	+	2584	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	32	4184	32	-293	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCATAGTCTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	88287653	88294127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88287819_88290872_88291047_88291882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011955	chr17	+	2538	2	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	4520	2428	4520	1463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTTCTTCATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88292141	88295883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88294410_88295613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011956	chr17	+	484	1	NIC	ENSMUSG00000005370.5	novel	4256	10	NA	NA	6315	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAACCCTTGTGTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	88293936	88294420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_88293900_88294400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011957	chr17	+	438	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	8037	1361	8037	-1361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTGTTTGAATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	88295658	88296950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88295883_88296571_88296690_88296854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011958	chr17	+	414	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	9232	285	9232	-285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGATGAATCAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	88296853	88298026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88296945_88297621_88297777_88297858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011959	chr17	+	496	3	ISM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	10028	-9	10028	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88297649	88298320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88297777_88297858_88298059_88298151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011960	chr17	+	444	3	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	-1	42653	-1	-42653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATAGTAGCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	88837518	88852895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88837747_88850272_88850342_88852748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011961	chr17	+	420	3	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	15227	38458	15201	-38458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGCTGCGCGGGGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	88852746	88857090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88852896_88854995_88855098_88856921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011962	chr17	+	410	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	17486	37365	17460	-37365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGGTATTACATAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	88855005	88858183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88855098_88856921_88857087_88857218_88857278_88858089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011963	chr17	+	402	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	20569	29429	20543	-29429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCCTCCTTGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88858088	88866119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88858185_88862277_88862331_88863009_88863160_88866016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011964	chr17	+	391	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	24760	29256	24734	-29256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCATTCCCCTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	88862279	88866292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88862331_88863009_88863160_88866016_88866119_88866204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011965	chr17	+	398	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	25490	25955	25464	-25955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTGTCCCAGGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	88863009	88869593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88863160_88866016_88866119_88866204_88866294_88869536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011966	chr17	+	410	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	28508	22387	28482	-22387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTTTGAACCCGAACC	NA	NA	NA	NA	NA	NA	NA	NA	88866027	88873161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88866119_88866204_88866294_88869536_88869674_88873068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011967	chr17	+	407	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	32125	15361	32099	-15361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTCCTGCTAACCATC	NA	NA	NA	NA	NA	NA	NA	NA	88869644	88880187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88869674_88873068_88873162_88876507_88876636_88880030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011968	chr17	+	527	3	ISM	ENSMUSG00000034709.9	ENST00000449090.6	2794	20	38986	10739	38960	-10739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTTCCTGTTTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	88876505	88884809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88876636_88880030_88880184_88884565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011969	chr17	+	484	3	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	42517	10739	42491	-10739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTTCCTGTTTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	88880036	88884809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88880184_88882619_88882713_88884565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011970	chr17	+	383	2	NNC	ENSMUSG00000034709.9	novel	2794	20	NA	NA	42497	-10739	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTTCCTGTTTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	88880042	88884809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr17_+_88880188_88884571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011971	chr17	+	418	3	ISM	ENSMUSG00000034709.9	ENST00000449090.6	2794	20	42606	7569	42580	-7569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGACACGGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	88880125	88887979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88880184_88884565_88884809_88887862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011972	chr17	+	546	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	45107	5606	45081	-5606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCTTCATGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	88882626	88889942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88882713_88884565_88884809_88887862_88887980_88889842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011973	chr17	+	477	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	47085	4211	47059	-4211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTATGCAGCATGAACGA	NA	NA	NA	NA	NA	NA	NA	NA	88884604	88891337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88884809_88887862_88887980_88889842_88889942_88891280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011974	chr17	+	716	4	ISM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	50409	0	50383	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTGTCATTTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	88887928	88895548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_88887980_88889842_88889942_88891280_88891410_88895111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011975	chr17	+	439	1	NIC	ENSMUSG00000034709.9	novel	2887	21	NA	NA	57564	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTGTCATTTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	88895109	88895548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr17_+_88895100_88895500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011976	chr17	-	1176	4	ISM	ENSMUSG00000024107.8	ENST00000403273.5	1808	11	36361	0	36263	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTACACCTCCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	89063042	89049454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_-_89050300_89057530_89057612_89061171_89061358_89062978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011977	chr17	+	292	1	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTTGGATTCTATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	90986453	90986745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr17_+_90986500_90986700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011978	chr17	+	692	1	FSM	ENSMUSG00000043346.10	ENSMUST00000057074.10	747	1	636	-581	636	581	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGCCATCACCAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	91544874	91545566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_91544900_91545600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011979	chr17	+	337	1	FSM	ENSMUSG00000117476.2	ENSMUST00000234959.2	313	1	47	-71	47	71	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAGTAACTCACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94915659	94915996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_94915700_94916000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011980	chr17	+	110	1	FSM	ENSMUSG00002076104.1	ENSMUST00020183003.1	107	1	-3	0	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTACAAACTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	95072249	95072359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr17_+_95072200_95072400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011981	chr17	+	684	1	ISM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	12720	0	12720	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTCGTCATGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	95185065	95185749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr17_+_95185100_95185700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011982	chr18	-	1030	1	ISM	ENSMUSG00000063889.17	ENSMUST00000151311.8	2485	7	60208	306	13695	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTGTATGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	3267383	3266353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_3266400_3267400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011983	chr18	-	1376	5	FSM	ENSMUSG00000063889.17	ENST00000348787.6	1376	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCACAAGTATGAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	3325474	3266865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_3267733_3273421_3273579_3295039_3295183_3295321_3295417_3325360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011984	chr18	-	641	5	ISM	ENSMUSG00000063889.17	ENSMUST00000122958.8	2254	8	4412	1226	4305	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAACTATGAACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	3295147	3267581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_3267733_3273421_3273579_3276693_3276730_3287903_3288093_3295039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011985	chr18	-	499	4	ISM	ENSMUSG00000063889.17	ENST00000374734.7	657	5	30103	-1	4078	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGATTTGGACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	3295374	3267983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_3268130_3273421_3273579_3295039_3295183_3295321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011986	chr18	-	846	6	FSM	ENSMUSG00000063889.17	ENST00000337656.8	846	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTGATTTGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	3325477	3267984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_3268130_3273421_3273579_3287903_3288093_3295039_3295183_3295321_3295417_3325360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011987	chr18	+	694	3	ISM	ENSMUSG00000024231.16	ENST00000374748.5	3020	22	48258	140	48250	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAATATGACAGATAACC	NA	NA	NA	NA	NA	NA	NA	NA	3431481	3435316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_3431586_3433993_3434111_3434843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011988	chr18	+	521	1	ISM	ENSMUSG00000024231.16	ENSMUST00000025073.12	3727	20	51948	918	51704	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACATCTGTAAATGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	3434935	3435456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_3434900_3435500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011989	chr18	+	1216	3	FSM	ENSMUSG00000024232.3	ENST00000375533.6	1242	3	30	-4	30	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGACGGGTGTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3508161	3512784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_3508290_3511259_3511545_3511981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011990	chr18	+	1506	4	ISM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	11475	0	11475	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	4387066	4397330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_4387180_4394973_4395067_4395155_4395230_4396104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011991	chr18	-	2832	4	FSM	ENSMUSG00000050945.9	ENST00000413025.5	2826	4	-3	-3	-3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTCTCAATTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	5288916	5210357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_5211199_5213118_5214920_5245385_5245504_5288844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011992	chr18	-	318	1	ISM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	123763	330	78237	2	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATTCTCAATTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	5210676	5210358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_5210400_5210700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011993	chr18	-	911	3	ISM	ENSMUSG00000050945.9	ENST00000375311.1	1742	5	43408	2684	43408	-2684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCGCAAGACCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	5245505	5213383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_5214028_5214772_5214920_5245385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011994	chr18	+	786	1	ISM	ENSMUSG00000117508.2	ENSMUST00000234953.2	1317	5	19997	0	19997	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGTCTAAAATATAATT	NA	NA	NA	NA	NA	NA	NA	NA	5965179	5965965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_5965200_5966000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011995	chr18	-	769	1	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	39753	0	39753	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGACGTATTAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	6201770	6201001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_6201000_6201800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011996	chr18	-	1067	3	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	32317	1995	32317	-1995	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACCAGGAGTTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	6209206	6202996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_6203708_6208186_6208336_6208999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011997	chr18	-	738	4	ISM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	30	25903	30	-25903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTACTCCATGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	6241493	6226904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_6226969_6227587_6227662_6234814_6234903_6240981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011998	chr18	-	862	2	FSM	ENSMUSG00000024240.14	ENST00000469059.2	856	2	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTTTTGTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	6490821	6488887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_6489391_6490462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000011999	chr18	+	140	2	NNC	ENSMUSG00000073639.7	novel	128	2	NA	NA	-4	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAGTTTAAAAGTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	6765233	6770113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_6765314_6770053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012000	chr18	+	2144	3	ISM	ENSMUSG00000117461.2_ENSMUSG00000073639.7	ENSMUST00000234626.2	729	7	19355	-1742	-4200	1195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCACTCTCCAAACAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	6784567	6790435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_6784689_6784938_6785006_6788479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012001	chr18	+	2013	1	Genic_Genomic	ENSMUSG00000073639.7	novel	NA	NA	NA	NA	27182	3	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGATTTATTCAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	6792419	6794432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_6792400_6794400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012002	chr18	-	487	3	FSM	ENSMUSG00000061802.7	ENST00000576034.5	474	3	-3	-10	-3	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTACAGTATTTTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	7294617	7264990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_7265149_7266882_7266982_7294387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012003	chr18	-	434	3	NNC	ENSMUSG00000061802.7	novel	474	3	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGACAAATCTTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	7294578	7265000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_7265145_7266882_7266982_7294387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012004	chr18	+	680	4	ISM	ENSMUSG00000024283.16	ENST00000679398.1	3450	14	41061	9132	41061	-7659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGATCCTATGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	7910561	7918480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_7910825_7916051_7916298_7917552_7917676_7918432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012005	chr18	+	742	2	ISM	ENSMUSG00000024283.16	ENSMUST00000172018.8	1965	14	52384	-573	52384	207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCATTCCCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	7921884	7926712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_7921984_7926069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012006	chr18	+	665	1	ISM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	57751	1416	57447	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGTATGTATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	7926947	7927612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_7926900_7927600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012007	chr18	+	624	1	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACATTCAGAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	8694757	8695381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr18_+_8694800_8695400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012008	chr18	-	1047	1	ISM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	136800	0	136620	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGACTTCATCTCATATG	NA	NA	NA	NA	NA	NA	NA	NA	9313350	9312303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_9312300_9313400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012009	chr18	+	504	2	ISM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	141343	23808	141343	-23808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGGCCCTCCTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	9848937	9858836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_9849151_9858545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012010	chr18	+	318	2	ISM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	151259	22670	151259	-22670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATATGTCAGCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	9858853	9859974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_9859035_9859837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012011	chr18	+	381	2	ISM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	167197	5419	167197	-5419	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCATAGATTTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	9874791	9877225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_9874935_9876987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012012	chr18	+	346	1	ISM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	174704	0	174704	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATCTGTGTTCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	9882298	9882644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_9882300_9882600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012013	chr18	+	2392	4	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	31783	87	31783	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAATACTAAAAAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	9989688	9995402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_9989775_9992127_9992276_9992831_9992908_9993320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012014	chr18	-	873	1	Genic_Genomic	ENSMUSG00000047879.18	novel	NA	NA	NA	NA	36135	6	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTAAGTGACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	9993932	9993059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_9993100_9993900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012015	chr18	+	2162	1	ISM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	35422	0	35422	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTGTTTACACATTATG	NA	NA	NA	NA	NA	NA	NA	NA	9993327	9995489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_9993300_9995500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012016	chr18	-	1014	3	ISM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	32312	-212	32312	212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAGTACTATACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	9997755	9995381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_9996249_9997172_9997281_9997716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012017	chr18	-	326	1	FSM	ENSMUSG00000094111.3	ENSMUST00000179225.3	379	1	50	3	50	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGACCTCCTCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	10483415	10483089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_10483100_10483400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012018	chr18	-	1141	1	NIC	ENSMUSG00000024293.17	novel	4545	11	NA	NA	42459	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTCACTAGCTTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	10567648	10566507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_10566500_10567600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012019	chr18	-	1149	2	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	38051	0	38051	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACAATGTTATATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	10572056	10566599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_10567647_10571954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012020	chr18	-	1245	3	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	15294	19377	15294	-19347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGTCACTTTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	10594813	10585976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_10586042_10588438_10588551_10593745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012021	chr18	-	1298	2	ISM	ENSMUSG00000024293.17	ENSMUST00000145320.2	2249	11	13548	28171	13546	-28171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACTCAAAGTAAATGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	10596561	10594800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_10595876_10596338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012022	chr18	+	860	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGGTGCATGTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	10617774	10628232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012023	chr18	+	849	4	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	10617778	10628231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_10617927_10623630_10623708_10626831_10627018_10627793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012024	chr18	+	432	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	9	-2	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGTGTAGGGACAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	10617804	10627957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012025	chr18	+	792	4	NNC	ENSMUSG00000002477.6	novel	858	4	NA	NA	-33	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGTGCATGTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	10617835	10628231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_10617927_10623630_10623708_10626825_10627018_10627799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012026	chr18	+	465	3	FSM	ENSMUSG00000002477.6	ENST00000582475.1	465	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATCTACTATATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	10617868	10628008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_10617927_10626825_10627018_10627793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012027	chr18	+	243	2	ISM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	39314	37011	39314	-37011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATCAGACTTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	11829799	11838924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_11829867_11838748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012028	chr18	+	203	2	ISM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	48341	27040	48341	-27040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAGATATTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	11838826	11848895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_11838925_11848790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012029	chr18	+	149	1	ISM	ENSMUSG00000041238.17	ENSMUST00000115861.9	3523	19	109457	326	85304	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAAAATGTGGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	11875789	11875938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_11875800_11875900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012030	chr18	+	813	6	ISM	ENSMUSG00000024404.8	ENST00000577501.5	1869	13	4	16055	4	-16055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATGCTTAGCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	12261842	12272518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012031	chr18	+	243	2	ISM	ENSMUSG00000024404.8	ENST00000577501.5	1869	13	10535	12482	10535	-12482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGTCTTTCATGCATA	NA	NA	NA	NA	NA	NA	NA	NA	12272373	12276091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12272518_12275992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012032	chr18	+	325	2	ISM	ENSMUSG00000024404.8	ENST00000577501.5	1869	13	14155	6528	14155	-6528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAAAATGGTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	12275993	12282045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12276121_12281847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012033	chr18	+	1989	6	ISM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	20048	818	20007	-818	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAAGTCATTAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	12281845	12289626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012034	chr18	+	277	1	ISM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	26517	1853	26476	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGCCACAGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	12288314	12288591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12288300_12288600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012035	chr18	+	1466	1	Genic_Genomic	ENSMUSG00000024404.8	novel	NA	NA	NA	NA	27142	2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGATTGGAGAGAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	12288980	12290446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_12289000_12290400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012036	chr18	+	333	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	53	67587	53	-67587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTTGAGGCTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	12637343	12643616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12637453_12639977_12640092_12643506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012037	chr18	+	262	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	15627	53529	15627	-53529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTATTAAGTCAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	12652917	12657674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12653068_12657562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012038	chr18	+	233	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	20490	52244	20490	-52244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGAGGCAGCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	12657780	12658959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12657895_12658840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012039	chr18	+	147	2	ISM	ENSMUSG00000024421.17	ENST00000269217.11	5181	38	20856	56833	20845	-52315	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGACTGCTAAAGAATATT	NA	NA	NA	NA	NA	NA	NA	NA	12658135	12658888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12658235_12658840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012040	chr18	+	267	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	21550	50528	21550	-50528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGCAGACCAACAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	12658840	12660675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12659038_12660605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012041	chr18	+	278	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	23310	49696	23310	-49696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTATCTGCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	12660600	12661507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12660723_12661351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012042	chr18	+	373	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	24059	48567	24059	-48567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATGACACAGAAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	12661349	12662636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12661507_12661769_12661912_12662562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012043	chr18	+	274	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	25324	46007	25324	-46007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATTAAGGACAGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	12662614	12665196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12662666_12664888_12665006_12665090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012044	chr18	+	304	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	27798	44064	27798	-44064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGAGATGCTGCAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	12665088	12667139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12665271_12667017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012045	chr18	+	318	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	29724	40288	29724	-40288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATTATGAGGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	12667014	12670915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12667161_12670743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012046	chr18	+	304	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	33473	38325	33473	-38325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTCCAGCTGACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	12670763	12672878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12670915_12672725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012047	chr18	+	284	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	35435	38053	35435	-38053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTCGGCGGTTATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	12672725	12673150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12672878_12673018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012048	chr18	+	430	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	35726	35708	35726	-35708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGCAGAAAACCAGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	12673016	12675495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12673182_12673591_12673726_12675364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012049	chr18	+	257	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	38086	30681	38086	-30681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTTTATTTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	12675376	12680522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12675510_12680398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012050	chr18	+	373	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	43107	25251	43107	-25251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGGGGTTCAGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	12680397	12685952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12680519_12682248_12682383_12685834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012051	chr18	+	385	3	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	48558	21380	48558	-21380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCTTTACTTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	12685848	12689823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12685953_12686221_12686363_12689683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012052	chr18	+	274	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	52392	20343	52392	-20343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGATCTTTTTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	12689682	12690860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12689824_12690727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012053	chr18	+	266	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	53457	16296	53457	-16296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTCAGAGCCTTACC	NA	NA	NA	NA	NA	NA	NA	NA	12690747	12694907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12690860_12694753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012054	chr18	+	247	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	57461	10390	57461	-10390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCCCTGCAGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	12694751	12700813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12694908_12700722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012055	chr18	+	304	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	63429	6113	63429	-6113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAGACTCAGAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	12700719	12705090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12700890_12704956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012056	chr18	+	307	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	67663	3813	67663	-3813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACCATCAAGAAAGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	12704953	12707390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12705141_12707270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012057	chr18	+	294	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	69987	235	69987	-235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGCAGTTGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	12707277	12710968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12707412_12710808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012058	chr18	+	226	2	ISM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	73586	-1	73586	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCCAGATGCTTACATG	NA	NA	NA	NA	NA	NA	NA	NA	12710876	12711204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12710969_12711070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012059	chr18	+	141	2	ISM	ENSMUSG00000024421.17	ENST00000269217.11	5181	38	76112	876	76101	-876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACACATTGGAGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	12713391	12714845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12713437_12714749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012060	chr18	+	130	1	ISM	ENSMUSG00000024421.17	ENSMUST00000092070.13	10548	75	248716	349	78301	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCCAGCAAGAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	12715591	12715721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12715600_12715700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012061	chr18	+	1411	1	ISM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	94109	0	94091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGATGTGGATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	12870509	12871920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12870500_12871900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012062	chr18	+	846	3	NNC	ENSMUSG00000024430.15	novel	1083	4	NA	NA	0	263	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGTCTTTCTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	12874404	12887367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_12874459_12883719_12884062_12886917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012063	chr18	+	539	2	ISM	ENSMUSG00000024430.15	ENST00000627314.1	1410	3	0	2903	0	-2903	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTGCAGGTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	12874404	12884201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12874459_12883716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012064	chr18	+	491	3	ISM	ENSMUSG00000024430.15	ENST00000327201.10	1083	4	1	1187	0	-94	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCCACCTGCACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	12874405	12887010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12874459_12883716_12884062_12886917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012065	chr18	+	484	2	NNC	ENSMUSG00000024430.15	novel	1083	4	NA	NA	9429	82	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGGATTGGAACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	12883840	12887186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_12884062_12886923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012066	chr18	+	695	2	ISM	ENSMUSG00000024430.15	ENST00000627314.1	1410	3	9976	-3	9969	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACTTATGTGATGATGG	NA	NA	NA	NA	NA	NA	NA	NA	12884380	12887107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12884886_12886917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012067	chr18	+	540	2	ISM	ENSMUSG00000024430.15	ENST00000327201.10	1083	4	12664	-7	12657	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTGTTTTAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	12887068	12888204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_12887525_12888120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012068	chr18	-	530	1	Genic_Genomic	ENSMUSG00000044252.19	novel	NA	NA	NA	NA	64065	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCAGTTGATATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	12888899	12888369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_12888400_12888900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012069	chr18	+	1351	3	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	16371	1334	13579	-1334	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGTTTAATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	13121350	13124673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_13121443_13122801_13122937_13123549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012070	chr18	+	1205	1	ISM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	19823	0	17031	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	13124802	13126007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_13124800_13126000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012071	chr18	-	867	3	ISM	ENSMUSG00000024420.10	ENSMUST00000234410.2	5032	7	127235	29454	127235	-28798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCTTCGAAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	13977542	13850726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_13850805_13950294_13950380_13976838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012072	chr18	-	2311	6	ISM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	31708	-2	31646	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	14784177	14758685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012073	chr18	-	1520	1	ISM	ENSMUSG00000037013.18	ENSMUST00000040964.13	4153	10	55602	1447	55602	10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTGATTTTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	14760221	14758701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_14758700_14760200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012074	chr18	-	1824	5	FSM	ENSMUSG00000036225.16	ENST00000408011.7	2108	5	286	-2	286	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGATCTGTGTAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	15197208	15101805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15196961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012075	chr18	+	606	1	FSM	ENSMUSG00000071867.6	ENSMUST00000096579.6	447	1	137	-296	137	296	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGCCTTGCAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	15144439	15145045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_15144400_15145000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012076	chr18	-	869	3	FSM	ENSMUSG00000024411.12	ENST00000675739.1	860	3	-6	-3	-6	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACAGCACTGAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	15533066	15526504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_15526787_15531147_15531313_15532644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012077	chr18	-	260	1	FSM	ENSMUSG00000063628.3	ENSMUST00000076710.3	297	1	201	-164	201	164	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATCATGGGATTTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	16407800	16407540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_16407500_16407800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012078	chr18	-	597	1	ISM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	219773	0	80596	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16722530	16721933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_16721900_16722500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012079	chr18	-	894	3	ISM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	358	61394	358	-61248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTACCCAGATCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	16941945	16783327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_16783556_16907564_16907677_16941391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012080	chr18	-	739	5	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	39093	0	39093	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTACAGCGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	20839509	20821247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20839461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012081	chr18	-	604	5	ISM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	93	4241	93	-4241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGGCACTTTGCAGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	20878509	20825488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_20825637_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012082	chr18	+	880	3	ISM	ENSMUSG00000024317.16	ENST00000257190.9	1886	5	18881	786	18881	-786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACATCAAGAGAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	21153942	21159800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_21154057_21157465_21157574_21159142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012083	chr18	+	226	2	ISM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	18931	1991	18917	-1296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCTGTGCATATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	21153978	21159290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_21154057_21159142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012084	chr18	+	628	3	NNC	ENSMUSG00000024317.16	novel	1886	5	NA	NA	18937	-979	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAACTTGAAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21153998	21159607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_21154057_21157465_21157571_21159142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012085	chr18	+	652	1	ISM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	25539	4	24875	2	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAGTTTTGTAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	21159936	21160588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_21159900_21160600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012086	chr18	-	354	1	ISM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	171402	1182	171387	6	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTGAGGTTCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21261793	21261439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_21261400_21261800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012087	chr18	-	414	2	ISM	ENSMUSG00000042680.9	ENST00000269209.7	3739	6	168698	1332	168682	-1234	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGCACGACCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21264498	21262777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_21263083_21264389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012088	chr18	-	472	2	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	152075	2858	152075	-2858	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCATAACATGTGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	21281105	21264401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_21264557_21280788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012089	chr18	-	542	3	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	64022	20108	64022	-20108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCCGAAACATCGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	21369158	21281651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_21281962_21301792_21301924_21369057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012090	chr18	-	541	3	ISM	ENSMUSG00000042680.9	ENSMUST00000234115.2	4932	5	207	40247	207	-40247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCTGAAGAATCAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	21432973	21301790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_21301924_21369057_21369199_21432706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012091	chr18	-	222	1	Genic_Genomic	ENSMUSG00000024306.14	novel	NA	NA	NA	NA	15303	4	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAACTAAAGAGATACTTC	NA	NA	NA	NA	NA	NA	NA	NA	21962779	21962557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_21962600_21962800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012092	chr18	-	318	2	FSM	ENSMUSG00000024306.14	ENST00000579947.5	353	2	2	33	2	-33	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCGCTTTCCATTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	21978080	21962594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_21962778_21977945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012093	chr18	-	190	2	ISM	ENSMUSG00000041923.16	ENSMUST00000081423.13	3309	11	319565	1677	319565	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTCCGACGGAAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	22852148	22828114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_22828192_22852035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012094	chr18	-	128	2	ISM	ENSMUSG00000041923.16	ENST00000589544.5	2228	9	269502	24568	267902	-24568	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAACAGCTACTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	22903811	22852159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_22852214_22903737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012095	chr18	-	127	2	ISM	ENSMUSG00000041923.16	ENSMUST00000081423.13	3309	11	215284	77439	215284	-76285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGATCGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	22956429	22903876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_22903918_22956343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012096	chr18	-	140	2	ISM	ENSMUSG00000041923.16	ENSMUST00000081423.13	3309	11	116745	227473	116745	-226319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGAAACTGCAGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	23054968	23053910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_23053985_23054902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012097	chr18	-	133	2	ISM	ENSMUSG00000041923.16	ENSMUST00000164893.8	2175	10	212	257742	212	-257731	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGAAGATTTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	23172923	23085322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_23085368_23172835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012098	chr18	+	260	2	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	10525	89934	10525	-34491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCTGAACTTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	23678742	23702797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23678824_23702618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012099	chr18	+	434	3	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	34422	69331	-27851	-13888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTGTCTAAAGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	23702639	23723400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23702833_23716140_23716227_23723245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012100	chr18	+	263	2	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	55026	66597	-7247	-11154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGTTACTGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	23723243	23726134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23723401_23726028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012101	chr18	+	275	2	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	57809	64049	-4464	-8606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAAGGCCAGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	23726026	23728682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23726135_23728515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012102	chr18	+	357	3	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	60297	57020	-1976	-1577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTTCATCACCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	23728514	23735711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23728683_23730490_23730616_23735647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012103	chr18	+	284	3	ISM	ENSMUSG00000024302.17	ENST00000683876.1	1667	7	-1	12818	-1	-12818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTCCTCATCAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	23730489	23754517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23730616_23735647_23735732_23754443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012104	chr18	+	254	3	ISM	ENSMUSG00000024302.17	ENST00000683876.1	1667	7	5173	12214	5173	-12214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTGCACGGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	23735663	23755121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23735732_23754443_23754532_23755023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012105	chr18	+	1343	4	ISM	ENSMUSG00000024302.17	ENST00000683876.1	1667	7	24529	31	24529	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTTTTCTATTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	23755019	23767304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23755122_23758138_23758253_23764388_23764486_23766274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012106	chr18	+	1083	4	NNC	ENSMUSG00000024302.17	novel	1667	7	NA	NA	24569	-249	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTGTAGTCAGGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	23755059	23767086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_23755122_23758140_23758253_23764388_23764486_23766274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012107	chr18	+	350	3	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	89944	16366	27671	7531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTCTCTCCTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	23758161	23776365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23758253_23764388_23764486_23776203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012108	chr18	+	1067	1	NIC	ENSMUSG00000024302.17	novel	4490	18	NA	NA	35778	0	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTAACAGAGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	23766268	23767335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_23766300_23767300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012109	chr18	+	419	3	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	107984	12620	45711	11277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATCTTGTTCTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	23776201	23780111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23776364_23779253_23779344_23779944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012110	chr18	+	280	2	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	111725	8047	49452	-7812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGGACGAGGCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	23779942	23784684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23780111_23784572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012111	chr18	+	417	3	NNC	ENSMUSG00000024302.17	novel	3152	19	NA	NA	54082	-595	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGAAGCTGGTGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	23784572	23791901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_23784706_23786390_23786435_23791661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012112	chr18	+	348	3	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	116355	904	54082	-669	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCCATTCTGTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	23784572	23791827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23784706_23786385_23786435_23791661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012113	chr18	+	3036	1	ISM	ENSMUSG00000024302.17	ENSMUST00000115832.4	6295	21	241238	0	59246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTAGTGGGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	23789736	23792772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23789700_23792800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012114	chr18	+	276	2	ISM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	28867	40058	28867	-6838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGCTTGTTAATATC	NA	NA	NA	NA	NA	NA	NA	NA	23965907	23986856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23966038_23986710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012115	chr18	+	315	2	ISM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	49716	35699	49716	-2479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTCGAGGACATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	23986756	23991215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_23986857_23991000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012116	chr18	+	302	2	ISM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	73958	10160	73958	-8667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGGGGAACCCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	24010998	24016754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_24011141_24016594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012117	chr18	+	315	2	ISM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	79550	2849	79550	-1356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGCAGTAGAAACCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	24016590	24024065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_24016754_24023913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012118	chr18	+	225	1	ISM	ENSMUSG00000024277.15	ENSMUST00000170802.8	3936	8	141300	4	89649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTGGACTTATTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	24026689	24026914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_24026700_24026900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012119	chr18	+	767	2	Genic_Genomic	ENSMUSG00000117405.2	novel	592	1	NA	NA	4	245	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATAGCTGAACTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24078019	24078852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_24078717_24078782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012120	chr18	+	672	1	FSM	ENSMUSG00000117405.2	ENSMUST00000234075.2	592	1	27	-107	27	107	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAATTCCTCAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	24078042	24078714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_24078000_24078700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012121	chr18	+	1981	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	28	1031	28	-1031	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACCTGTGTGAAGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	24122716	24137402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_24122789_24123234_24123448_24135706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012122	chr18	+	1705	1	Genic_Genomic	ENSMUSG00000063281.10	novel	NA	NA	NA	NA	14045	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTGGGACACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	24136733	24138438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_24136700_24138400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012123	chr18	-	1157	2	ISM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	2998	-357	2998	357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGCATGTCACTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	24150379	24146624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24147743_24150340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012124	chr18	-	721	1	ISM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	6165	4223	5675	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGAAGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	24147702	24146981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24147000_24147700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012125	chr18	-	412	1	ISM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	16785	0	9745	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGGGTGTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24238225	24237813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24237800_24238200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012126	chr18	-	195	2	ISM	ENSMUSG00000047989.12	ENSMUST00000125169.2	756	5	3130	155	3130	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGCCTCAGAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	24244840	24239589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24239716_24244771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012127	chr18	-	153	2	ISM	ENSMUSG00000047989.12	ENSMUST00000125169.2	756	5	2176	5329	2176	-5329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACATCTGTCTATATTA	NA	NA	NA	NA	NA	NA	NA	NA	24245794	24244763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24244840_24245717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012128	chr18	-	181	2	ISM	ENSMUSG00000047989.12	ENSMUST00000125169.2	756	5	756	6295	756	-6295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCCTAACTGTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24247214	24245729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24245830_24247133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012129	chr18	-	278	2	ISM	ENSMUSG00000047989.12	ENSMUST00000055012.12	909	6	20	7703	20	-7699	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATATGAGGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	24254872	24247133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24247245_24254705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012130	chr18	+	902	2	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	49589	1250	49589	-1250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATTTCTTTTTACAATA	NA	NA	NA	NA	NA	NA	NA	NA	24415242	24418617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_24415294_24417766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012131	chr18	+	346	1	ISM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	81129	0	53876	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTCTGAGTAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24419529	24419875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_24419500_24419900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012132	chr18	+	954	4	ISM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	192	0	192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAATGGTAGTATTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	24604117	24610855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_24604142_24606006_24606207_24608581_24608782_24610325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012133	chr18	-	2424	1	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	42821	0	42821	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24620440	24618016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24618000_24620400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012134	chr18	-	2540	2	ISM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	23193	1010	23193	-1010	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCATGCCTTTAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	24640068	24619026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_24621389_24639890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012135	chr18	+	1048	3	ISM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	30379	307	22431	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTCCACACTCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	24767396	24772257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_24767530_24767957_24768066_24771450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012136	chr18	+	871	1	Genic_Genomic	ENSMUSG00000024271.9	novel	NA	NA	NA	NA	26735	7	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCTGAGTTTAGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	24771700	24772571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_24771700_24772600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012137	chr18	+	1376	4	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	375724	23113	375724	-23113	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTAACCCGGAAGTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	25218389	25243170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_25218670_25223086_25223965_25234582_25234742_25243111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012138	chr18	+	1342	4	ISM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	380420	20560	380420	-20560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTTTCCAGTCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	25223085	25245723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_25223965_25234582_25234742_25243111_25243295_25245602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012139	chr18	-	666	1	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	32305	0	31992	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGTATCTTCAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	25269759	25269093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_25269100_25269800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012140	chr18	-	730	2	ISM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	28405	2530	28092	-2530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACACCTTCAGTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	25273659	25271623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_25272197_25273502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012141	chr18	+	224	1	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTGCTTGTCATATGGA	NA	NA	NA	NA	NA	NA	NA	NA	27733312	27733536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr18_+_27733300_27733500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012142	chr18	+	181	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	28	56640	26	-56640	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAAGTTTTCTGGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	30405950	30407381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30406072_30407321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012143	chr18	+	174	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	1548	53863	149	-53863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATGGGTAAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	30407470	30410158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30407511_30410024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012144	chr18	+	168	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	4152	48938	2753	-48938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCGGCAGAACAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30410074	30415083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30410169_30415009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012145	chr18	+	148	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	15879	40439	14480	-40439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATGACAAGGAGTATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	30421801	30423582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30421891_30423523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012146	chr18	+	137	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	20805	36545	19406	-36545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGAGTTTTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	30426727	30427476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30426777_30427388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012147	chr18	+	151	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	32129	19642	30730	-19642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGATGCTGCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	30438051	30444379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30438096_30444272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012148	chr18	+	160	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	38402	18311	37003	-18311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAAGAAGGTAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	30444324	30445710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30444379_30445604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012149	chr18	+	146	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115811.8	3084	22	50647	6369	49248	-6369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGTTAACAAAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	30456569	30457652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30456660_30457596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012150	chr18	+	138	2	ISM	ENSMUSG00000033628.16	ENST00000639914.1	2461	22	59015	1	59015	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTTTTTAATATAACA	NA	NA	NA	NA	NA	NA	NA	NA	30466336	30469238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30466383_30469146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012151	chr18	+	178	2	ISM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	63373	4063	61851	947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTGCCCAGGTACGTC	NA	NA	NA	NA	NA	NA	NA	NA	30469172	30477116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_30469238_30477003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012152	chr18	-	531	1	NIC	ENSMUSG00000057455.13	novel	1806	5	NA	NA	341565	1	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTGTAAAGTGTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	31108560	31108029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_31108000_31108600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012153	chr18	-	1110	5	FSM	ENSMUSG00000057455.13	ENST00000589109.5	1175	5	65	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTAAAGTGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	31450105	31108030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_31108558_31286709_31286950_31345710_31345785_31376173_31376231_31449893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012154	chr18	-	634	6	FSM	ENSMUSG00000057455.13	ENST00000590910.1	831	6	42	155	42	-155	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCGATTCGGTATCGAT	NA	NA	NA	NA	NA	NA	NA	NA	31450083	31108490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_31108558_31286757_31286950_31317902_31317957_31345710_31345785_31376173_31376231_31449893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012155	chr18	-	263	1	Genic_Genomic	ENSMUSG00000024259.10	novel	NA	NA	NA	NA	29474	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATATATATGTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31713481	31713218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_31713200_31713500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012156	chr18	-	309	2	ISM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	104	27058	104	-27058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTAATCTTAAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	31742851	31740278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_31740318_31742581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012157	chr18	+	1006	2	ISM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	84679	-1	84679	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCAGTTTGCCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	31853710	31856117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_31853824_31855224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012158	chr18	+	895	1	NIC	ENSMUSG00000024260.15	novel	3811	19	NA	NA	86190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCAGTTTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	31855221	31856116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_31855200_31856100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012159	chr18	+	262	2	FSM	ENSMUSG00000041915.10	ENST00000446751.6	318	2	56	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGCCACCACGCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31892948	31972544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_31893169_31972502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012160	chr18	+	2291	4	ISM	ENSMUSG00000041915.10	ENSMUST00000234413.2	3181	8	13583	89	12855	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTACACTCATTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	31907711	31915706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_31907805_31909039_31909131_31911909_31912007_31913696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012161	chr18	-	1252	1	Genic_Genomic	ENSMUSG00000097748.2	novel	NA	NA	NA	NA	6575	7	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATTTAAAACAACCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	31915523	31914271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_31914300_31915500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012162	chr18	+	2047	1	Genic_Genomic	ENSMUSG00000041915.10	novel	NA	NA	NA	NA	20218	9	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAAAAACTGTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31915074	31917121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_31915100_31917100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012163	chr18	+	363	3	ISM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	0	1318	0	-1106	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTACCGGATGGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	31922211	31928436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_31922298_31924892_31925074_31928340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012164	chr18	+	455	3	ISM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	2728	427	2727	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATAACAGTCCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31924939	31929327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_31925074_31928340_31928437_31929102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012165	chr18	+	243	2	NNC	ENSMUSG00000024258.5	novel	1015	4	NA	NA	6127	-298	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAACATTGCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	31928339	31929244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_31928441_31929102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012166	chr18	+	276	1	Genic_Genomic	ENSMUSG00000024258.5	novel	NA	NA	NA	NA	7275	9	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATTTGTTAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	31929487	31929763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_31929500_31929800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012167	chr18	+	2394	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCACTGTTAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	31937250	31968475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012168	chr18	-	1256	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	1473	-2	1473	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGATGGTCTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	32043404	32042148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_32042100_32043400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012169	chr18	+	413	2	ISM	ENSMUSG00000024384.5	ENSMUST00000212675.2	2936	15	2417	17474	2417	-17474	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCCCAAACCTCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	32203237	32213098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32203276_32212723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012170	chr18	+	416	2	ISM	ENSMUSG00000024384.5	ENSMUST00000212675.2	2936	15	12569	14079	12569	-14079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCGGCAATGAAGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32213389	32216493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32213631_32216318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012171	chr18	+	401	4	ISM	ENSMUSG00000024384.5	ENSMUST00000212675.2	2936	15	19312	7011	19312	-7011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAATGCCACAGCGACG	NA	NA	NA	NA	NA	NA	NA	NA	32220132	32223561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32220206_32221308_32221439_32222441_32222560_32223481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012172	chr18	+	377	1	ISM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	36211	0	36184	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTAATGCTGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32237004	32237381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32237000_32237400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012173	chr18	-	715	3	ISM	ENSMUSG00000024386.10	ENST00000409048.1	1349	5	7475	85	7475	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGGTGAGCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	32260592	32256419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_32256870_32258147_32258266_32260445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012174	chr18	+	411	2	ISM	ENSMUSG00000024381.17	ENSMUST00000234857.2	1530	14	-69	29110	67	-29110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTTATGGAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32510213	32539233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32510544_32539152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012175	chr18	+	356	4	ISM	ENSMUSG00000024381.17	ENSMUST00000234857.2	1530	14	35873	15148	35846	-15148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGGCCAGGGGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	32546155	32553195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32546244_32547235_32547344_32552895_32552982_32553121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012176	chr18	+	985	5	ISM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	44691	0	44679	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAACGAGGCGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	32554988	32568786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012177	chr18	+	350	3	ISM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	47574	3995	47562	-3548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGACGGCAGGGGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	32557871	32564795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32558021_32559276_32559406_32564723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012178	chr18	+	289	3	ISM	ENSMUSG00000024381.17	ENSMUST00000234857.2	1530	14	54438	2864	54411	-2864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGGGTGTGGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	32564720	32565479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32564796_32565035_32565147_32565376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012179	chr18	+	627	3	ISM	ENSMUSG00000024381.17	ENSMUST00000025239.9	2406	19	54709	200	54709	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCACCGCCACACTTG	NA	NA	NA	NA	NA	NA	NA	NA	32565018	32568584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32565147_32565376_32565479_32568187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012180	chr18	+	605	1	NIC	ENSMUSG00000024381.17	novel	2091	15	NA	NA	57874	2	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACGAGGCGTGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	32568183	32568788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_32568200_32568800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012181	chr18	-	458	1	Genic_Genomic	ENSMUSG00000090523.3	novel	NA	NA	NA	NA	6642	3	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGGTTTGGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32661829	32661371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_32661400_32661800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012182	chr18	-	729	3	FSM	ENSMUSG00000090523.3	ENSMUST00000174459.2	2180	3	23	1428	23	42	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGGCAATGCAGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	32693064	32662802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_32663255_32665786_32665838_32692838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012183	chr18	+	354	1	Genic_Genomic	ENSMUSG00000024379.5	novel	NA	NA	NA	NA	4058	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTTTCATTCATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	32952493	32952847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_32952500_32952800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012184	chr18	+	1767	2	ISM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	27428	163	27342	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGACTTAAATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	32997705	33000484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_32997894_32998905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012185	chr18	+	1607	1	Genic_Genomic	ENSMUSG00000038299.17	novel	NA	NA	NA	NA	28680	3	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAAAGTTTGTCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	32999043	33000650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_32999000_33000600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012186	chr18	-	171	2	FSM	ENSMUSG00000024378.10	ENST00000509887.5	171	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTAAAACTCTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33341280	33338098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_33338219_33341229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012187	chr18	-	125	1	NIC	ENSMUSG00000024378.10	novel	5097	6	NA	NA	3057	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTAAAACTCTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33338223	33338098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_33338100_33338200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012188	chr18	-	736	1	ISM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	26275	0	25681	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTGGCTCATTATT	NA	NA	NA	NA	NA	NA	NA	NA	33570807	33570071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_33570100_33570800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012189	chr18	-	954	5	NNC	ENSMUSG00000042834.16	novel	2185	5	NA	NA	6	303	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACATGCTCCTTGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	33596670	33571188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012190	chr18	-	545	5	FSM	ENSMUSG00000042834.16	ENST00000453526.6	565	5	21	-1	21	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCTGACTCAAGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	33596655	33571585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596467_33596598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012191	chr18	-	539	4	NNC	ENSMUSG00000042834.16	novel	659	4	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATTCTGACTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	33596677	33571588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_33571893_33575868_33575947_33595073_33595141_33596587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012192	chr18	-	527	5	FSM	ENSMUSG00000042834.16	ENST00000455559.6	527	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCCTGGCTTTAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	33597291	33571645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33597198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012193	chr18	+	164	2	ISM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	490	34	490	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACTATGAATAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	33928434	33929005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_33928499_33928905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012194	chr18	+	112	1	ISM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	983	0	983	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACGTGTATGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33928927	33929039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_33928900_33929000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012195	chr18	+	379	4	ISM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	1	2026	1	-1819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAATGAATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	34464198	34467626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012196	chr18	+	198	3	ISM	ENSMUSG00000014504.17	ENST00000515463.1	525	4	0	1857	0	-1857	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCAGCCTCTGTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34464265	34467588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34464313_34467345_34467418_34467509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012197	chr18	+	591	4	ISM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	602	173	534	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGTGGAAGAAAGAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	34464799	34469479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34464879_34467345_34467418_34467509_34467622_34469151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012198	chr18	+	578	3	ISM	ENSMUSG00000014504.17	ENST00000282999.7	854	5	3082	151	3082	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCCCATGAGTTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	34467347	34469514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34467418_34467509_34467622_34469118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012199	chr18	+	416	1	Genic_Genomic	ENSMUSG00000014504.17	novel	NA	NA	NA	NA	4988	4	mono-exon	FALSE	NA	NA	NA	NA	NA	425	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGAATCAATAAATAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	34469253	34469669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_34469300_34469700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012200	chr18	-	1625	1	Genic_Genomic	ENSMUSG00000005873.7	novel	NA	NA	NA	NA	26839	2	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTAAAATGTTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	34479560	34477935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_34477900_34479600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012201	chr18	-	2136	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	36	680	13	-680	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCATATAGGAGCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	34506386	34478617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012202	chr18	-	1603	2	NNC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	23661	-727	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTAAAAGCACGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34482738	34478664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_34480217_34482687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012203	chr18	-	1597	2	NNC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	23544	-846	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGGGATAGCAGTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	34482855	34478783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_34480213_34482687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012204	chr18	-	667	4	FSM	ENSMUSG00000005873.7	ENST00000513339.5	684	4	20	-3	20	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGGGAATCTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34506379	34479910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_34480222_34490144_34490284_34505457_34505552_34506256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012205	chr18	-	311	1	NIC	ENSMUSG00000005873.7	novel	2852	5	NA	NA	26176	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTTGGGAATCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34480223	34479912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_34479900_34480200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012206	chr18	+	758	6	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	4211	4716	4211	-3722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCTTGTTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	34549944	34571125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34550103_34558068_34558298_34560369_34560541_34563735_34563838_34566341_34566407_34571092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012207	chr18	+	772	3	ISM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	25359	38	25359	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTGGGCATTCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	34571092	34575803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34571268_34571783_34571886_34575308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012208	chr18	-	326	1	Genic_Genomic	ENSMUSG00000003778.15	novel	NA	NA	NA	NA	25669	8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTATGACCCTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	34731985	34731659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_34731700_34732000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012209	chr18	-	818	3	ISM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	15973	5991	15973	-5991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACCAGAACTCAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	34741681	34740218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_34740545_34740827_34741109_34741470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012210	chr18	+	1300	4	ISM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	5687	-474	5687	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTGGCTCTGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	34764196	34766225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34764395_34764573_34764666_34764978_34765117_34765353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012211	chr18	+	934	1	Genic_Genomic	ENSMUSG00000003779.17	novel	NA	NA	NA	NA	6892	5	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGAAGTTCTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34765401	34766335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_34765400_34766300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012212	chr18	-	1630	2	ISM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	17222	973	17222	-973	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTCAGGGCAACAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	34767566	34765708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_34767218_34767445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012213	chr18	+	714	1	FSM	ENSMUSG00000078240.3	ENSMUST00000105038.3	1656	1	990	-48	990	48	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACCTTCAATACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	34870401	34871115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_34870400_34871100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012214	chr18	+	1162	1	ISM	ENSMUSG00000034300.18	ENSMUST00000049281.12	4475	5	13693	0	13043	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34905651	34906813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34905700_34906800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012215	chr18	+	1871	2	FSM	ENSMUSG00000038418.8	ENSMUST00000064795.6	4484	2	939	1674	-445	-1646	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCACATCCGCACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	34993814	34996363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_34994840_34995517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012216	chr18	+	1952	1	ISM	ENSMUSG00000038418.8	ENSMUST00000064795.6	4484	2	3210	0	1826	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTAGCCTGTTGTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	34996085	34998037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_34996100_34998000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012217	chr18	-	1990	1	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	27233	0	27233	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGTGCTTGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	35037827	35035837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35035800_35037800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012218	chr18	-	2334	4	ISM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	23808	323	23808	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGTTGTTTCACATG	NA	NA	NA	NA	NA	NA	NA	NA	35041252	35036160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012219	chr18	-	331	1	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	14344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTGTGAACCAATCATTA	NA	NA	NA	NA	NA	NA	NA	NA	35071448	35071117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_35071100_35071400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012220	chr18	-	539	3	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	13712	26	13712	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGCATGTAAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	35072080	35071143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35071447_35071636_35071778_35071985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012221	chr18	-	313	3	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	13298	539	13298	-539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGAAATGGCGTACAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	35072494	35071656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35071778_35071985_35072079_35072395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012222	chr18	-	314	3	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	12424	861	12424	-861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGGTTCTTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	35073368	35071978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35072079_35072395_35072491_35073249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012223	chr18	-	410	3	ISM	ENSMUSG00000024359.11	ENST00000677064.1	2167	16	8316	2775	6701	-2775	internal_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTTTTGAGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	35079091	35073892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35073998_35076128_35076339_35078996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012224	chr18	-	428	3	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	6098	5032	6098	-5032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATGACAAGGATGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	35079694	35076149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35076339_35078996_35079090_35079548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012225	chr18	-	324	3	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	4761	7879	4761	-7879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGGATGGAAAAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	35081031	35078996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35079090_35079548_35079712_35080963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012226	chr18	-	327	3	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	4560	8448	4560	-8448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTTCAAGAGAGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	35081232	35079565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35079712_35080963_35081071_35081158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012227	chr18	-	383	3	ISM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	1333	10040	1333	-10040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTAGATCTCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35084459	35081157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35081233_35082069_35082195_35084276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012228	chr18	-	341	3	ISM	ENSMUSG00000024359.11	ENST00000677425.1	2298	16	1883	10990	272	-10990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCATTTGTGTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	35085520	35082107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35082195_35084276_35084459_35085448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012229	chr18	-	336	3	ISM	ENSMUSG00000024359.11	ENST00000677425.1	2298	16	1609	13158	-2	-13158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTAATAGGAAAATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	35085794	35084275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35084459_35085448_35085537_35085729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012230	chr18	+	836	5	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	24	74643	24	-74643	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTATATTTGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	35285677	35313007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012231	chr18	+	731	4	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	21650	72076	21650	-72076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGACCTGCTCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	35307303	35315574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35307473_35308149_35308270_35312737_35313008_35315402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012232	chr18	+	675	4	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	22496	32452	22496	-32452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCTGAAAAATAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	35308149	35355198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35308270_35312737_35313008_35315402_35315607_35355117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012233	chr18	+	710	4	ISM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	27082	31022	27082	-31022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTATTAGTGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	35312735	35356628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35313008_35315402_35315607_35355117_35355199_35356475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012234	chr18	-	1191	2	FSM	ENSMUSG00000071862.4	ENST00000521094.2	1188	2	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTGGCTTAATAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	35348040	35345186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_35345983_35347645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012235	chr18	+	693	5	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	8114	9961	8114	-9787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCCGGGACATCCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	35356500	35377863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012236	chr18	+	1158	4	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	35511	433	35511	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATAAACTATAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	35383897	35387391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35384081_35384218_35384325_35385668_35385804_35386657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012237	chr18	+	785	1	Genic_Genomic	ENSMUSG00000037815.8	novel	NA	NA	NA	NA	38667	6	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAAGTCGTTCTTTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	35387053	35387838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_35387100_35387800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012238	chr18	-	366	1	ISM	ENSMUSG00000024357.11	ENSMUST00000237896.2	1501	9	232108	0	232101	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35399814	35399448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35399400_35399800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012239	chr18	-	582	3	ISM	ENSMUSG00000024357.11	ENSMUST00000235619.2	1524	9	229181	197	229149	-197	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCTCCATCAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	35402766	35399645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35399963_35402091_35402257_35402666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012240	chr18	-	387	3	ISM	ENSMUSG00000024357.11	ENSMUST00000237896.2	1501	9	180903	2643	180896	-2643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAGTGAGTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	35451019	35402091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35402257_35402666_35402764_35450894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012241	chr18	-	413	3	ISM	ENSMUSG00000024357.11	ENSMUST00000237896.2	1501	9	173393	3217	173386	-3217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCTGCTCCCTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35458529	35402665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35402764_35450894_35451017_35458336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012242	chr18	-	414	3	ISM	ENSMUSG00000024357.11	ENSMUST00000237896.2	1501	9	157670	51448	157663	-51448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGCAGCAAGGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	35474252	35450896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35451017_35458336_35458529_35474150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012243	chr18	-	486	4	ISM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	80791	58897	80724	-58897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATCAGGTATTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	35551191	35458345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35458529_35474150_35474251_35481692_35481814_35551109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012244	chr18	-	374	3	ISM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	60547	82246	60480	81402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGTATATTGTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	35571435	35481694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35481814_35551109_35551249_35571319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012245	chr18	-	392	3	ISM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	2	151659	2	11989	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATATTTGCTCTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	35631980	35551107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35551249_35571319_35571434_35631843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012246	chr18	+	609	3	ISM	ENSMUSG00000117694.2	ENST00000509990.5	2932	16	16	18173	16	-15442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGCAGTCTATATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	35686431	35705319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35686557_35690389_35690450_35704895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012247	chr18	+	1165	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACTGTGTAGTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	35686448	35691369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012248	chr18	+	130	1	FSM	ENSMUSG00002076696.1	ENSMUST00020183295.1	141	1	11	0	11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTTACCCAGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	35687555	35687685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_35687600_35687700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012249	chr18	+	1173	2	ISM	ENSMUSG00000037236.17	ENST00000510056.5	3032	14	2	17845	2	-17521	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAACAGATGCTTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	35695273	35705996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35695346_35704895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012250	chr18	+	1201	3	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	9387	12006	9387	-12006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTAAGATTTTTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	35704892	35711511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35705989_35710610_35710673_35711468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012251	chr18	+	418	4	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	16452	8742	16452	-8742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGCCTTTCATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	35711957	35714775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35712071_35712318_35712372_35714222_35714349_35714649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012252	chr18	+	429	3	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	19141	7617	19141	-7617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTGCTTAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	35714646	35715900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35714776_35714971_35715140_35715768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012253	chr18	+	718	4	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	19461	5581	19461	-5581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTTATATTGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	35714966	35717936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35715140_35715768_35715901_35716930_35716975_35717567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012254	chr18	+	1187	5	ISM	ENSMUSG00000037236.17	ENST00000510056.5	3032	14	20495	-10	20261	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTGTATTTTTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	35715766	35723851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35723432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012255	chr18	+	554	3	ISM	ENSMUSG00000037236.17	ENSMUST00000237744.2	2845	15	22220	2011	22220	-2011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGCTGAATATAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	35717725	35721506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35717935_35720683_35720907_35721384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012256	chr18	+	2044	3	ISM	ENSMUSG00000037236.17	ENSMUST00000235960.2	2638	13	25415	-654	25173	654	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTGGGAGGCAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	35720678	35725126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35720907_35721384_35721507_35723432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012257	chr18	+	710	1	ISM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	28556	2412	28261	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGTCATGTTGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35723766	35724476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35723800_35724500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012258	chr18	+	1823	1	Genic_Genomic	ENSMUSG00000037236.17	novel	NA	NA	NA	NA	29575	15	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTAAGATTACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	35725080	35726903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_35725100_35726900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012259	chr18	+	1078	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	30	367	-2	300	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGTGTTAATCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35731699	35749872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012260	chr18	+	450	3	FSM	ENSMUSG00000037058.17	ENST00000511706.5	463	3	14	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAATAAAAGTGCTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	35731723	35749448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_35731813_35743923_35744088_35749251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012261	chr18	+	618	3	NNC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	10878	29	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTCTGTCTTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	35743995	35749601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_35744088_35746379_35746556_35749251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012262	chr18	+	648	2	NNC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	13363	255	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGGCTTTTGCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35746480	35749827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_35746553_35749251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012263	chr18	+	211	1	NIC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	16130	11	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGAGACTGTTACTAAG	NA	NA	NA	NA	NA	NA	NA	NA	35749247	35749458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_35749200_35749500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012264	chr18	+	657	1	Genic_Genomic	ENSMUSG00000037058.17	novel	NA	NA	NA	NA	16469	3	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGTTATTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	35749586	35750243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_35749600_35750200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012265	chr18	-	462	4	ISM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	1611	0	1553	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAATGCCCAACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	35793628	35789741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012266	chr18	-	640	3	FSM	ENSMUSG00000024352.13	ENST00000509959.5	638	3	2	-4	2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAGAAATAGTATATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	35795206	35793039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_35793407_35793496_35793628_35795064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012267	chr18	-	368	1	NIC	ENSMUSG00000117874.2	novel	1115	7	NA	NA	1808	-12720	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGAAATAGTATATTCT	NA	NA	NA	NA	NA	NA	NA	NA	35793408	35793040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_35793000_35793400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012268	chr18	-	601	4	FSM	ENSMUSG00000024352.13	ENST00000507779.2	602	4	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCCATTTTTCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	35795179	35793108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_35793398_35793496_35793628_35793844_35793911_35795064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012269	chr18	-	448	3	NNC	ENSMUSG00000024352.13	novel	602	4	NA	NA	1298	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGGCTCGCTCCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	35793883	35793116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_35793398_35793496_35793628_35793847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012270	chr18	-	137	1	ISM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	31882	0	31882	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	35804292	35804155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_35804200_35804300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012271	chr18	+	205	2	ISM	ENSMUSG00000091896.9	ENSMUST00000167406.2	2393	8	253	13652	253	-13652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTTGGAGATGATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	35904907	35926564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35905066_35926517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012272	chr18	+	232	2	ISM	ENSMUSG00000091896.9	ENSMUST00000167406.2	2393	8	29710	1470	29710	-1470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACAGCAGTGCTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	35934364	35938746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35934421_35938570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012273	chr18	+	206	1	Genic_Genomic	ENSMUSG00000091896.9	novel	NA	NA	NA	NA	35362	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTGTCTCATCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	35940016	35940222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_35940000_35940200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012274	chr18	+	706	2	ISM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	31	2758	31	-2755	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAGCACAAAAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35962871	35991983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35963040_35991445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012275	chr18	+	2101	2	ISM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	28604	3	28604	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAACACTCCTGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35991444	35994738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_35992510_35993702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012276	chr18	+	589	1	Genic_Genomic	ENSMUSG00000046668.10	novel	NA	NA	NA	NA	31315	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCTTCTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	35994155	35994744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_35994200_35994700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012277	chr18	+	713	2	ISM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	17816	0	17739	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGACTTACTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	36499565	36536033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36499795_36535549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012278	chr18	+	487	1	NIC	ENSMUSG00000046727.14	novel	1385	5	NA	NA	53720	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGACTTACTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	36535546	36536033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_36535500_36536000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012279	chr18	-	1112	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGCCTTGCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	36587578	36536726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012280	chr18	-	1036	3	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	3276	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36584301	36536728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_36537511_36565358_36565444_36584132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012281	chr18	-	954	2	ISM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	3276	0	3276	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36584301	36536728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_36537514_36584132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012282	chr18	-	1245	1	ISM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	9634	0	9634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTTCATTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	36639224	36637979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_36638000_36639200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012283	chr18	-	1307	2	ISM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	9078	224	9078	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTCTTGGTCATTGATA	NA	NA	NA	NA	NA	NA	NA	NA	36639780	36638203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_36639418_36639687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012284	chr18	+	765	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	15	79685	-4	-29283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTCAATAGTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	36693651	36711827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36694109_36708071_36708223_36711670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012285	chr18	+	690	4	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	17925	18475	17925	-18475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTCTATGTTGAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	36711668	36722635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36711828_36714120_36714269_36716664_36716813_36722400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012286	chr18	+	554	3	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	28655	13750	28655	-13750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTATTGGCACAAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	36722398	36727360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36722635_36724499_36724595_36727137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012287	chr18	+	378	2	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	33448	13062	33448	-13062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGGCTTTAAAAATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	36727191	36728048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36727376_36727854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012288	chr18	+	305	2	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	34109	7181	34109	-7181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATTTTTAAAATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	36727852	36733929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36728047_36733818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012289	chr18	+	305	2	ISM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	40076	0	40076	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAAGAGATTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	36733819	36741110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36733929_36740914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012290	chr18	+	429	2	Genic_Genomic	ENSMUSG00000085172.2	novel	772	1	NA	NA	275	50	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGAGCTGTCCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	36743285	36743832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_36743513_36743630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012291	chr18	+	566	1	FSM	ENSMUSG00000085172.2	ENSMUST00000153606.2	772	1	463	-257	463	257	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTCATTACTTAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	36743473	36744039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_36743500_36744000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012292	chr18	+	278	2	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	52505	44481	52398	5921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTAAAATAGACTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	36746141	36747031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36746274_36746885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012293	chr18	+	706	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	53269	33472	53162	16930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATGATAAGCAACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	36746905	36758040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36747030_36747767_36747871_36757561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012294	chr18	+	820	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	64196	25678	64089	24724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAGAGGCACAATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	36757832	36765834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36758321_36765119_36765266_36765402_36765515_36765760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012295	chr18	+	505	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	72122	23654	72015	-23654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTTTTATAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36765758	36767858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36765907_36767279_36767423_36767644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012296	chr18	+	501	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	74061	19750	73954	-19750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATGACATATGGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36767697	36771762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36767859_36771257_36771434_36771598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012297	chr18	+	359	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	77698	18098	77591	-18098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTACTATGTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	36771334	36773414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36771434_36771598_36771762_36773317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012298	chr18	+	740	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	80991	13747	80884	-13747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTAAAGATGTCTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	36774627	36777765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36774747_36775978_36776148_36777313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012299	chr18	+	678	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	83676	11681	83569	-11681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCCCATATTGATGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	36777312	36779831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36777768_36778157_36778293_36779743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012300	chr18	+	614	2	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	86105	10867	85998	-10867	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTAGTTCTCCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	36779741	36780645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36779894_36780183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012301	chr18	+	816	3	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	87645	1674	87538	-1674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATTCAGGAATGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	36781281	36789838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36781794_36788526_36788731_36789738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012302	chr18	+	312	2	ISM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	701	11693	701	-11693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTCTCCCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	36781613	36787277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36781794_36787145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012303	chr18	+	701	4	ISM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	94915	-120	94808	120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCAATGGAAAATTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	36788551	36791632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36788731_36789738_36789916_36791026_36791192_36791452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012304	chr18	+	233	1	ISM	ENSMUSG00000024483.20	ENST00000360839.7	8207	34	98072	0	97984	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGGAGTGGGGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	36791727	36791960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36791700_36792000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012305	chr18	-	1980	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTCTGTCTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	36803869	36799733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012306	chr18	+	1502	3	FSM	ENSMUSG00000033272.13	ENSMUST00000185899.2	312	3	-376	-814	18	814	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGGCTTGGCGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	36812285	36815592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_36812677_36813568_36813668_36814580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012307	chr18	+	1599	3	ISM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	938	717	908	-717	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACCACCAGAGTTACCTC	NA	NA	NA	NA	NA	NA	NA	NA	36813569	36816189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36813668_36814580_36814819_36814926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012308	chr18	+	1357	1	Genic_Genomic	ENSMUSG00000033272.13	novel	NA	NA	NA	NA	2899	3	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCCTGTCTTCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36815560	36816917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_36815600_36816900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012309	chr18	-	1645	2	FSM	ENSMUSG00000051439.8	ENSMUST00000061829.8	1641	2	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTGTTTGTTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	36859855	36858119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_36859451_36859541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012310	chr18	+	990	2	FSM	ENSMUSG00000006850.9	ENSMUST00000237870.2	992	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTTGTTGTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	36868129	36869250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_36868310_36868440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012311	chr18	-	577	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	-2	-3	-2	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTCGTACGTCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	36877612	36875381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_36875712_36877233_36877341_36877472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012312	chr18	-	334	1	Genic_Genomic	ENSMUSG00000014294.5	novel	NA	NA	NA	NA	1893	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGATGTCGTACGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	36875717	36875383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_36875400_36875700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012313	chr18	-	482	3	NNC	ENSMUSG00000014294.5	novel	572	3	NA	NA	14	-69	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTTTATATAAAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	36877596	36875453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_36875712_36877233_36877341_36877479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012314	chr18	+	464	4	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	1956	856	1956	-856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTGCATAGTTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	36895228	36896007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36895307_36895407_36895588_36895710_36895811_36895901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012315	chr18	+	684	3	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	2435	308	2435	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACATGATCAGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	36895707	36896555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36895811_36895901_36896072_36896144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012316	chr18	+	467	1	ISM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	3124	0	3124	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGTGCCAAGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	36896396	36896863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36896400_36896900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012317	chr18	-	712	4	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	12442	-1	12442	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGTTTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36903381	36899805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012318	chr18	-	403	1	NIC	ENSMUSG00000001380.8	novel	1989	13	NA	NA	15615	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTGTTTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36900208	36899805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_36899800_36900200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012319	chr18	-	602	3	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	12577	210	12577	-210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCAGGTGGATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	36903246	36900016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_36900390_36901139_36901257_36903134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012320	chr18	-	677	5	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	11573	1340	11573	-1340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAAGGTACAGGGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	36904250	36901146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012321	chr18	-	304	3	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	11335	4048	11335	-4048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGAACCCAGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	36904488	36903854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_36903952_36904148_36904248_36904380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012322	chr18	-	388	4	ISM	ENSMUSG00000001380.8	ENST00000675204.1	1805	11	6471	4639	6471	-4639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGCCTAAAGATTATG	NA	NA	NA	NA	NA	NA	NA	NA	36909352	36904445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_36904489_36905310_36905437_36906572_36906669_36909229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012323	chr18	+	940	7	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	4529	570	4529	-570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCGCTGGTATAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	36920951	36923672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012324	chr18	+	643	3	ISM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	6762	-257	6762	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACTCTGCACCATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	36923184	36924499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36923304_36923521_36923669_36924122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012325	chr18	+	423	1	ISM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	8301	831	7939	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAAGTAATTCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	36924361	36924784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_36924400_36924800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012326	chr18	+	2302	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTGACTTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	36926934	36932717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012327	chr18	+	1328	2	FSM	ENSMUSG00000103800.2	ENST00000506751.2	2269	2	19	922	19	-922	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGCAGCCCGAATACACGG	NA	NA	NA	NA	NA	NA	NA	NA	37085854	37126883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_37086256_37125956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012328	chr18	+	954	2	NNC	ENSMUSG00000103800.2	novel	5338	4	NA	NA	44	-1271	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTAGATGCTAACGAT	NA	NA	NA	NA	NA	NA	NA	NA	37085879	37126534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_37086047_37125747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012329	chr18	+	951	1	ISM	ENSMUSG00000103800.2	ENSMUST00000194038.2	5338	4	1433	192903	1433	2	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCGAAGACCGACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	37126856	37127807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37126900_37127800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012330	chr18	+	1253	2	ISM	ENSMUSG00000102206.6	ENST00000525929.2	5149	5	152	165953	152	-165680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGAGCGGAGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	37144131	37154761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37144467_37153843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012331	chr18	+	1005	2	ISM	ENSMUSG00000102206.6	ENST00000529310.6	5189	4	1372	31455	1353	-31182	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGGTATGTCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	37145332	37289259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37146286_37289207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012332	chr18	+	849	3	ISM	ENSMUSG00000103310.2	ENST00000527624.1	2138	4	847	26034	847	-26034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAGTCAGAATCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	37154183	37292406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37154885_37289207_37289267_37292317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012333	chr18	+	1468	2	ISM	ENSMUSG00000103310.2	ENST00000531613.2	5223	4	945	31453	918	-29179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGTATGTCCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	37154254	37289261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37155619_37289157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012334	chr18	+	1618	3	ISM	ENSMUSG00000102697.2	ENSMUST00000047479.3	5888	4	12602	1292	12602	-1292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGCCTCTTGCATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	37289157	37319418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37289267_37292317_37292407_37317998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012335	chr18	+	1489	1	ISM	ENSMUSG00000103442.6	ENSMUST00000193839.6	4925	5	255989	0	255888	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGGTGGTCATTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	37319225	37320714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37319200_37320700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012336	chr18	+	1395	1	FSM	ENSMUSG00000048347.6	ENSMUST00000055949.4	5041	1	3646	0	3646	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTGTTATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37626163	37627558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_37626200_37627600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012337	chr18	+	2149	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	-1	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATGGTCCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37875292	37897084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_37875522_37885058_37886038_37896143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012338	chr18	+	2155	3	FSM	ENSMUSG00000103088.2	ENST00000616430.1	2151	3	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGTCCTGCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	37875292	37897086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_37876283_37885815_37886038_37896143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012339	chr18	+	2151	1	ISM	ENSMUSG00000103088.2	ENSMUST00000003599.9	4684	4	146	97483	-1	-19640	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCAGCCCCTCGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37875292	37877443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37875300_37877400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012340	chr18	+	2146	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	0	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATGGTCCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37875293	37897084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_37875463_37885001_37886038_37896143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012341	chr18	-	2143	3	NNC	ENSMUSG00000097330.3	novel	2685	3	NA	NA	3510	4318	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCAGGCCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	37897084	37875293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_37876276_37885813_37886028_37896137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012342	chr18	+	2151	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCCCATGGTCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	37875293	37897081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_37876285_37885815_37886038_37896143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012343	chr18	-	2139	2	Antisense	novelGene_ENSMUSG00000103081.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGGCTCAGGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	37897084	37875296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr18_-_37877154_37896802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012344	chr18	+	2137	3	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATGGTCCTGCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	37875299	37897085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_37876283_37885815_37886038_37896153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012345	chr18	-	2124	3	NNC	ENSMUSG00000097330.3	novel	2685	3	NA	NA	3510	4300	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCTGCTCCCTCCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	37897084	37875311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_37875546_37885084_37886028_37896137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012346	chr18	+	2095	2	NNC	ENSMUSG00000103088.2	novel	2151	3	NA	NA	21	-10142	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAATTTTCGCCATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	37875314	37886941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_37877169_37886700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012347	chr18	+	2149	2	ISM	ENSMUSG00000103088.2	ENST00000616430.1	2151	3	9536	-1	9536	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCATGGTCCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37884829	37897084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37886038_37896143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012348	chr18	-	2140	2	NNC	ENSMUSG00000097330.3	novel	2685	3	NA	NA	3510	346	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGGCTCAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	37897084	37884834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_37886028_37896137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012349	chr18	+	1765	2	FSM	ENSMUSG00000104063.2	ENST00000612073.1	2164	2	400	-1	400	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCCTGCTGTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	37885218	37897088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_37886357_37896461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012350	chr18	-	891	1	FSM	ENSMUSG00000103309.2	ENSMUST00000192003.2	2205	1	1314	0	1314	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATGTCATTGTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37939661	37938770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_37938800_37939700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012351	chr18	+	428	4	ISM	ENSMUSG00000102918.2	ENST00000617222.4	729	5	19	6831	19	-6831	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTTCCCATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	37939503	37966406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_37939631_37941877_37942031_37958073_37958133_37966317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012352	chr18	+	2648	4	FSM	ENSMUSG00000102918.2	ENSMUST00000076807.7	4687	4	935	1104	913	585	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTTTGGGAAGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	37940397	37973822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_37942031_37958073_37958133_37966317_37966407_37972955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012353	chr18	+	298	1	NIC	ENSMUSG00000103458.2	novel	2856	4	NA	NA	887147	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTACTTGTACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	37972940	37973238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_37972900_37973200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012354	chr18	+	1659	1	Genic_Genomic	ENSMUSG00000103897.2_ENSMUSG00000103088.2_ENSMUSG00000102440.2_ENSMUSG00000102742.2_ENSMUSG00000104063.2_ENSMUSG00000102543.6_ENSMUSG00000103081.4_ENSMUSG00000103749.2_ENSMUSG00000103585.2_ENSMUSG00000102222.2_ENSMUSG00000103144.2_ENSMUSG00000103037.2_ENSMUSG00000102748.2_ENSMUSG00000103567.2_ENSMUSG00000104346.2_ENSMUSG00000102918.2_ENSMUSG00000102428.2_ENSMUSG00000102828.6_ENSMUSG00000103677.2_ENSMUSG00000103472.2_ENSMUSG00000023036.15_ENSMUSG00000103793.2_ENSMUSG00000103332.2	novel	NA	NA	NA	NA	15857	1	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACCGCGTCTGTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	37973268	37974927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_37973300_37974900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012355	chr18	+	1227	5	ISM	ENSMUSG00000044024.17	ENSMUST00000163591.9	1057	6	-362	314	32	-314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCAGGATGCCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38088279	38091284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38088970_38089981_38090048_38090141_38090209_38090641_38090828_38091066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012356	chr18	+	988	4	ISM	ENSMUSG00000044024.17	ENST00000521367.5	1773	6	1892	-1	1463	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATACCCTTTATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	38090139	38092174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38090209_38090641_38090828_38091066_38091443_38091817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012357	chr18	-	1350	1	ISM	ENSMUSG00000038524.14	ENSMUST00000043437.14	4270	20	10846	145	10806	4	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGGAAGGGAGCAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	38091981	38090631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_38090600_38092000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012358	chr18	-	1340	2	ISM	ENSMUSG00000038524.14	ENST00000522783.5	2441	19	9924	-741	9924	741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGACTAGACAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	38092863	38091400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_38092708_38092830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012359	chr18	+	1083	1	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	1650	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAAGATATTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	38387522	38388605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_38387500_38388600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012360	chr18	+	516	3	NNC	ENSMUSG00000024442.7	novel	1097	8	NA	NA	4493	-37	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTGAAATGTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	38390365	38395909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_38390454_38391080_38391240_38395640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012361	chr18	-	472	2	Antisense	novelGene_ENSMUSG00000024442.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGCAATGGGAGAGATAAC	NA	NA	NA	NA	NA	NA	NA	NA	38395949	38391078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr18_-_38391250_38395648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012362	chr18	+	357	2	ISM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	10890	530	8329	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTAAAGGATTGAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	38394201	38395152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38394339_38394932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012363	chr18	+	380	1	ISM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	11991	0	9430	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGCCCTTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38395302	38395682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38395300_38395700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012364	chr18	+	158	2	ISM	ENSMUSG00000060450.15	ENSMUST00000237416.2	618	4	33	16969	33	-13536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTGCACAAATTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	38429785	38432898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38429852_38432806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012365	chr18	+	1058	4	FSM	ENSMUSG00000060450.15	ENST00000427378.1	1052	4	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTTTAGAGCAGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	38433494	38446438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_38433644_38440942_38441449_38442537_38442767_38446264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012366	chr18	+	254	2	ISM	ENSMUSG00000060450.15	ENST00000347642.7	2480	7	26	15890	19	-11600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCAAATGGCTGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	38433515	38434834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38433644_38434708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012367	chr18	+	205	2	ISM	ENSMUSG00000060450.15	ENST00000347642.7	2480	7	1340	9633	1333	-5343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCTCTTCCAGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	38434829	38441091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38434861_38440917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012368	chr18	+	207	2	ISM	ENSMUSG00000060450.15	ENST00000347642.7	2480	7	14234	1036	14227	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGGAATGGTTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	38447723	38449688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38447861_38449618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012369	chr18	+	1307	2	ISM	ENSMUSG00000060450.15	ENSMUST00000171461.3	3340	10	17898	106	14259	59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTTTGACACTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	38447755	38450783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38447857_38449577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012370	chr18	+	1222	1	Genic_Genomic	ENSMUSG00000060450.15	novel	NA	NA	NA	NA	16185	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACACGGTGTCCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	38449681	38450903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_38449700_38450900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012371	chr18	-	237	1	ISM	ENSMUSG00000052102.16	ENSMUST00000237487.2	1929	5	11194	15	11190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	38460839	38460602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_38460600_38460800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012372	chr18	-	400	2	ISM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	8330	1185	8330	-1177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTTGGCTATGGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	38463699	38461787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_38462027_38463538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012373	chr18	-	527	3	ISM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	5685	2926	5658	-2926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTCAGGCCTTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	38466371	38463536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_38463714_38465020_38465206_38466206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012374	chr18	-	341	3	ISM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	3881	4544	3854	-4544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGGACCCGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	38468175	38465154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_38465206_38466206_38466390_38468068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012375	chr18	-	283	3	ISM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	854	5638	854	-5630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTGCCGGAGGGATCGA	NA	NA	NA	NA	NA	NA	NA	NA	38471175	38466240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_38466390_38468068_38468171_38471143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012376	chr18	+	1442	6	ISM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	28780	0	28718	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTGTTTCATTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	38580739	38598250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012377	chr18	-	216	1	ISM	ENSMUSG00000036585.17	ENSMUST00000040647.11	3981	4	76650	3233	16604	1	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTTGGTTGACCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	38975174	38974958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_38975000_38975200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012378	chr18	-	459	3	FSM	ENSMUSG00000036585.17	ENST00000407758.5	494	3	8	27	8	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGAGGAGTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	38991770	38974986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_38975175_38980099_38980199_38991598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012379	chr18	-	732	1	Genic_Genomic	ENSMUSG00000024487.6	novel	NA	NA	NA	NA	14803	1	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTGTCTTTCTTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	40337679	40336947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_40336900_40337700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012380	chr18	-	848	2	ISM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	11560	1840	11560	-1840	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATCAAATATTTGACATT	NA	NA	NA	NA	NA	NA	NA	NA	40340922	40338788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_40339454_40340739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012381	chr18	-	630	5	ISM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	16039	0	15991	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	42068268	42008664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012382	chr18	-	560	4	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	38769	0	38769	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGGATGGTTTTCGGATA	NA	NA	NA	NA	NA	NA	NA	NA	42345679	42335559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012383	chr18	-	493	4	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	21672	24741	21672	-24741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCTGGGCAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	42362776	42360300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_42360359_42361070_42361284_42361722_42361862_42362693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012384	chr18	-	415	3	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	5305	41281	5305	-41281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGTTTCCTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	42379143	42376840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_42376955_42377813_42377976_42379004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012385	chr18	+	245	1	FSM	ENSMUSG00000096699.2	ENSMUST00000091925.6	438	1	240	-47	240	47	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTAATTAATTAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	42385702	42385947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_42385700_42385900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012386	chr18	+	2038	1	ISM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	64152	0	64133	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	42472569	42474607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_42472600_42474600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012387	chr18	-	939	1	Genic_Genomic	ENSMUSG00000024500.21	novel	NA	NA	NA	NA	253634	7	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCCTGAGTAACCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	42778725	42777786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_42777800_42778700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012388	chr18	-	1175	3	ISM	ENSMUSG00000024500.21	ENSMUST00000117687.8	2271	9	236015	-174	236015	174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATAGAAACAGCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	42796344	42778159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_42779073_42781738_42781831_42796174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012389	chr18	-	875	1	ISM	ENSMUSG00000024501.21	ENSMUST00000121805.9	5479	14	116428	0	51414	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCTCCAGTCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	43454923	43454048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43454000_43454900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012390	chr18	-	1368	4	ISM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	43410	-659	43410	659	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGACAGGTCTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	43462927	43456632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012391	chr18	-	591	4	ISM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	30912	5462	30912	-5401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCAAGGGTTGGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	43475425	43462753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43462927_43465936_43466079_43466945_43467103_43475306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012392	chr18	-	543	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	1836	0	1836	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGTACAGGCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	43609025	43608482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_43608500_43609000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012393	chr18	-	510	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	635	1234	635	-1234	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTGCAACATGACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43610226	43609716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_43609700_43610200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012394	chr18	-	384	1	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	60461	0	60461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATCAAAATCCTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	43663431	43663047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43663000_43663400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012395	chr18	-	449	2	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	53099	1606	53099	57	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATGTAACACCACAC	NA	NA	NA	NA	NA	NA	NA	NA	43670793	43664653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43665030_43670720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012396	chr18	-	255	1	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	58927	1663	58927	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGAACCAAAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	43664965	43664710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43664700_43665000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012397	chr18	-	299	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	43688	7706	43688	-6043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGCCTTGATGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	43680204	43670753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43670792_43673650_43673717_43680009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012398	chr18	-	349	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	38599	16966	38599	-15303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGAGGACCAAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	43685293	43680013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43680214_43682680_43682759_43685222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012399	chr18	-	219	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	32589	26498	32589	-24835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGAATGAAGTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	43691303	43689545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43689612_43690394_43690449_43691204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012400	chr18	-	255	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	31633	27346	31633	-25683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCGGGCCTCGATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	43692259	43690393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43690449_43691204_43691304_43692158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012401	chr18	-	277	3	ISM	ENSMUSG00000024502.11	ENST00000333010.6	2973	21	121760	30885	24835	-30885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGGGCGCACCACCC	NA	NA	NA	NA	NA	NA	NA	NA	43699057	43695595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43695659_43696333_43696418_43698927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012402	chr18	-	319	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	19632	37108	19632	-35445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTTTGCCTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	43704260	43700155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43700276_43701132_43701190_43704118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012403	chr18	-	346	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	18828	38085	18828	-36422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAATGGAACTGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	43705064	43701132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43701190_43704118_43704260_43704916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012404	chr18	-	313	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	15268	41145	15268	-39482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAGAACAAGAGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	43708624	43704192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43704260_43704916_43705064_43708525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012405	chr18	-	438	3	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	13318	41887	13318	-40224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAATTCAGAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	43710574	43704934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43705064_43708525_43708625_43710364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012406	chr18	-	562	2	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	8644	47316	8644	-45653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCCCTGCGACTTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	43715248	43710363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43710575_43714897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012407	chr18	-	626	2	ISM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	-1	52003	-1	-50340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAAACTGCCAAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	43723893	43715050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43715396_43723612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012408	chr18	-	429	2	ISM	ENSMUSG00000024502.11	ENST00000333010.6	2973	21	93	50463	93	-50463	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTCTCCGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	43820724	43715173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_43715396_43820517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012409	chr18	+	623	3	ISM	ENSMUSG00000024471.13	ENST00000421631.6	1369	9	17347	0	17347	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGCACAGCCTGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	44487181	44488496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_44487349_44487868_44488003_44488174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012410	chr18	+	693	5	ISM	ENSMUSG00000024472.10	ENST00000513585.6	1272	9	25117	63	25117	-63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCATTTAGAACTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44538769	44550968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012411	chr18	+	698	2	ISM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	38522	868	38522	-868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCACTGTACAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44552174	44552915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_44552540_44552582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012412	chr18	+	413	1	ISM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	39780	4250	39721	3	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTACCAGTCCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44553373	44553786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_44553400_44553800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012413	chr18	+	473	3	ISM	ENSMUSG00000054477.17	ENST00000610748.4	2074	7	634	30593	186	-30273	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAACACATACTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	45693406	45788356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_45693692_45694287_45694384_45788264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012414	chr18	+	383	3	ISM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	116855	31	116855	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGCCACCAACTTCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	45810075	45818598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_45810132_45816137_45816208_45818341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012415	chr18	+	309	1	ISM	ENSMUSG00000054477.17	ENSMUST00000066890.14	3682	11	416574	137	125425	4	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGGTCTCTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	45818645	45818954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_45818600_45819000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012416	chr18	-	2555	2	ISM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	1142	2817	1142	-2817	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAACTGGGACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	46657896	46637629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_46639457_46657168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012417	chr18	-	341	1	Genic_Genomic	ENSMUSG00000033184.15	novel	NA	NA	NA	NA	8945	3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATTAACTGTAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	46721436	46721095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_46721100_46721400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012418	chr18	-	543	2	ISM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	4034	367	3813	-367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGAACTTAACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	46726568	46721465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_46721756_46726315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012419	chr18	-	395	2	ISM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	294	5219	73	-5219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTAAATAAGAAAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	46730308	46726317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_46726562_46730157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012420	chr18	+	1394	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	69	1402	18	-362	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTATATATAATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	46730839	46741876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_46730868_46731707_46731768_46740570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012421	chr18	+	1531	2	FSM	ENSMUSG00000057561.11	ENSMUST00000235973.2	2651	2	321	799	32	-792	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGAGACTGCCTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	46731112	46741446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_46731768_46740570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012422	chr18	+	1797	2	ISM	ENSMUSG00000057561.11	ENSMUST00000235455.2	1905	4	1524	0	1265	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	NA	NA	NA	NA	NA	NA	NA	46732345	46742245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_46732468_46740570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012423	chr18	+	577	3	ISM	ENSMUSG00000057561.11	ENSMUST00000236497.2	757	5	9488	-21	9488	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAATCTCTCCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	46740568	46749523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_46740810_46748859_46748995_46749322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012424	chr18	+	1332	1	Genic_Genomic	ENSMUSG00000057561.11	novel	NA	NA	NA	NA	10867	1	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGTTTTTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46741947	46743279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_46741900_46743300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012425	chr18	-	4155	1	Genic_Genomic	ENSMUSG00000032905.6	novel	NA	NA	NA	NA	1023	4	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAGCTCCTTTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	46867361	46863206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_46863200_46867400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012426	chr18	-	4429	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	99	237	99	-237	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCCTTTAAATTAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	46874547	46863447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012427	chr18	-	454	2	ISM	ENSMUSG00000032905.6	ENST00000500945.2	507	3	799	-1	799	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCTGTAAAAAATAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	46867585	46867083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_46867106_46867153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012428	chr18	+	1523	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGCCTCCCATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	46874942	46923896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012429	chr18	+	386	4	FSM	ENSMUSG00000024480.10	ENST00000605743.1	376	4	0	-10	0	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACTCCCAGGTAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	46875081	46923102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_46875149_46912254_46912327_46913727_46913836_46922963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012430	chr18	+	1085	4	ISM	ENSMUSG00000024481.6	ENSMUST00000234519.2	2053	9	153	7839	7	-7839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAAAACAGGTGAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	46983258	47006964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012431	chr18	+	293	3	ISM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	-22	72036	-22	-72036	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTATTGCCTCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	47091905	47096838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_47091996_47093482_47093574_47096726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012432	chr18	+	313	3	ISM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	1600	67912	1581	-67912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGGTCATGCTGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	47093527	47100962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_47093574_47096726_47096838_47100806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012433	chr18	+	331	3	ISM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	4846	45218	4827	-45218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAACTGCGCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	47096773	47123656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_47096838_47100806_47100963_47123545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012434	chr18	+	335	3	ISM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	8852	777	8852	-777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTTTATCAACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	47100798	47219378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_47100963_47123545_47123657_47219318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012435	chr18	+	406	3	ISM	ENSMUSG00000042705.10	ENSMUST00000234085.2	494	5	31599	-52	31597	52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCCTCACAGGAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	47123543	47220327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_47123657_47219318_47219379_47220094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012436	chr18	+	282	1	Genic_Genomic	ENSMUSG00000042705.10	novel	NA	NA	NA	NA	128836	2	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCGTACAATGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	47220782	47221064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_47220800_47221100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012437	chr18	+	361	1	FSM	ENSMUSG00000117621.2	ENSMUST00000234633.2	515	1	186	-32	186	32	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTATTATTTTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	47245391	47245752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_47245400_47245800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012438	chr18	-	293	1	ISM	ENSMUSG00000019647.17	ENSMUST00000019791.14	6856	19	120303	2981	2299	2	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATACTCTTCAAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	47381594	47381301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_47381300_47381600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012439	chr18	-	353	2	FSM	ENSMUSG00000019647.17	ENST00000503865.1	1464	2	4	1107	4	-961	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTCCAAGGACCCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	47383889	47382410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_47382652_47383777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012440	chr18	+	1620	2	FSM	ENSMUSG00000059040.6	ENSMUST00000076155.6	1791	2	6	165	6	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGTCACCTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	48178407	48181314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_48178513_48179799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012441	chr18	+	1576	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	206	-35	206	16	mono-exon	FALSE	NA	NA	NA	NA	NA	664	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTACTATTTTACTATA	NA	NA	NA	NA	NA	NA	NA	NA	48179919	48181495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_48179900_48181500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012442	chr18	+	1910	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148159.3	1921	2	12	-1	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGGATTTAGATTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	50186360	50224850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_50186687_50223266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012443	chr18	+	326	3	ISM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	23	56736	23	-56396	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGCAGTGGCCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	50261290	50272600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50261477_50263192_50263247_50272514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012444	chr18	+	864	1	FSM	ENSMUSG00000085939.4	ENSMUST00000145417.2	875	1	12	-1	12	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACCAAAGCAAACGAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	50267804	50268668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_50267800_50268700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012445	chr18	+	191	3	ISM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	11246	53778	-3020	-53438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTTTTTGTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	50272513	50275558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50272623_50273406_50273467_50275536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012446	chr18	+	343	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	2	49352	2	-49352	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGTTAGAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	50275535	50279644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50275559_50275659_50275707_50277807_50277893_50279456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012447	chr18	+	350	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	2291	40709	2291	-40709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAAACTTTGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	50277824	50288287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50277893_50279456_50279645_50288193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012448	chr18	+	294	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	4060	35669	4060	-35669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGAGCCCTGAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	50279593	50293327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50279645_50288193_50288286_50291451_50291477_50293201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012449	chr18	+	469	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	17667	31077	17667	-31077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTACCAGGAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	50293200	50297919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50293331_50295168_50295270_50297681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012450	chr18	+	465	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	22149	23797	22149	-23797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATGTTTTAAAGATATT	NA	NA	NA	NA	NA	NA	NA	NA	50297682	50305199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50297919_50299950_50300003_50303786_50303859_50305094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012451	chr18	+	289	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	24423	22199	24423	-22199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGGGTAGTCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	50299956	50306797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50300003_50303786_50303859_50305094_50305199_50306730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012452	chr18	+	310	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	28257	18686	28257	-18686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTAAGTGACGCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	50303790	50310310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50303859_50305094_50305199_50306730_50306797_50310238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012453	chr18	+	279	4	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	29631	17914	29631	-17914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGTGTCTTGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	50305164	50311082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50305199_50306730_50306797_50310238_50310309_50310973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012454	chr18	+	269	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	34702	16794	34702	-16794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATCAGAGTTGGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	50310235	50312202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50310309_50310973_50311081_50312113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012455	chr18	+	280	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	35442	13910	35442	-13910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGCTTACCCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	50310975	50315086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50311081_50312113_50312201_50314998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012456	chr18	+	315	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	36578	12632	36578	-12632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGATGTTTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	50312111	50316364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50312201_50314998_50315086_50316225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012457	chr18	+	352	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	39463	4089	39463	-4089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCCAGTAACATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	50314996	50324907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50315086_50316225_50316360_50324778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012458	chr18	+	332	3	ISM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	53754	4429	39488	-4089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCCAGTAACATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	50315021	50324907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50315086_50316225_50316365_50324778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012459	chr18	+	416	3	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	40715	-102	40715	102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGCAGAAATCGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	50316248	50329098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50316360_50324778_50324907_50328921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012460	chr18	+	225	1	ISM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	67844	0	53578	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGCTCCTCTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	50329111	50329336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_50329100_50329300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012461	chr18	+	856	2	FSM	ENSMUSG00000035420.8	ENST00000620555.4	851	2	-2	-3	-2	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGGTTTGTTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	50411674	50415327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_50411761_50414557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012462	chr18	+	993	3	FSM	ENSMUSG00000035420.8	ENST00000613773.4	992	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCTGGGTTTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	50411675	50415324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_50411761_50413591_50413733_50414557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012463	chr18	+	983	3	NNC	ENSMUSG00000035420.8	novel	992	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCTGGGTTTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	50411682	50415324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_50411761_50413591_50413730_50414557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012464	chr18	+	826	2	NIC	ENSMUSG00000035420.8	novel	851	2	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCTGGGTTTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	50411686	50415324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_50411746_50414557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012465	chr18	+	780	1	NIC	ENSMUSG00000035420.8	novel	1343	4	NA	NA	2872	4	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGTTTGTTGAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	50414548	50415328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_50414500_50415300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012466	chr18	+	2251	3	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	22556	-2	22556	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGGCCTGCATATA	NA	NA	NA	NA	NA	NA	NA	NA	52621320	52625005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_52622044_52623089_52623128_52623515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012467	chr18	-	317	1	Genic_Genomic	ENSMUSG00000024529.15	novel	NA	NA	NA	NA	13292	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCATTTCTTGGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	52649454	52649137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_52649100_52649500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012468	chr18	-	218	2	ISM	ENSMUSG00000024529.15	ENSMUST00000025409.9	4741	7	8792	3038	8792	-3036	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGACTCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	52653954	52652176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_52652306_52653865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012469	chr18	-	217	2	ISM	ENSMUSG00000024529.15	ENSMUST00000025409.9	4741	7	8333	4725	8333	-4723	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATTATTTGGCAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	52654413	52653863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_52653982_52654314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012470	chr18	-	217	2	ISM	ENSMUSG00000024529.15	ENSMUST00000025409.9	4741	7	4473	5174	4473	-5172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGCTTTGAAGATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	52658273	52654312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_52654411_52658154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012471	chr18	-	190	2	ISM	ENSMUSG00000024529.15	ENSMUST00000025409.9	4741	7	1314	10864	1314	-10862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCTGGGAGTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	52661432	52660002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_52660111_52661350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012472	chr18	-	203	2	ISM	ENSMUSG00000024529.15	ENSMUST00000025409.9	4741	7	864	12212	864	-12210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGATTTCCACAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	52661882	52661350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_52661460_52661788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012473	chr18	+	563	3	FSM	ENSMUSG00000118365.2	ENSMUST00000235622.2	549	3	-7	-7	-7	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGAATGTTTTTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	52661725	52710404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_52661819_52696727_52696947_52710153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012474	chr18	+	819	5	NNC	ENSMUSG00000034484.9	novel	2067	15	NA	NA	36619	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGGATCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	53346006	53353937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_53346031_53349452_53349597_53351173_53351259_53351360_53351433_53353443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012475	chr18	+	1418	2	ISM	ENSMUSG00000024535.17	ENSMUST00000025417.9	994	8	139407	-44	139407	44	intron_retention	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTTTTATGTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	53518247	53523939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_53518315_53522588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012476	chr18	+	1404	1	Genic_Genomic	ENSMUSG00000024535.17	novel	NA	NA	NA	NA	143750	2	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGAGTTTGTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	53522590	53523994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_53522600_53524000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012477	chr18	-	1404	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTGCAAGACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	53551187	53539402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012478	chr18	-	486	1	ISM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	61418	921	61121	7	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTCCAAATTTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	53816201	53815715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_53815700_53816200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012479	chr18	-	840	5	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	37384	368	37384	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTTTTCAGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53839938	53816090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836296_53839891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012480	chr18	-	605	4	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	22807	29509	22449	-29509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTAAGTGTAGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	53854873	53848075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_53848169_53851518_53851702_53852287_53852438_53854694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012481	chr18	-	484	3	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	21328	33763	20970	-33763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCAACTATGCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	53856352	53852329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_53852438_53854694_53854873_53856154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012482	chr18	-	625	3	NNC	ENSMUSG00000048799.9	novel	3944	20	NA	NA	19667	-36138	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATATTGAGGTATGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	53857655	53854704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_53854873_53856154_53856378_53857421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012483	chr18	-	575	3	NNC	ENSMUSG00000048799.9	novel	3944	20	NA	NA	16504	-37668	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCCAACCAAGGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	53860818	53856234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_53856378_53857421_53857654_53860618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012484	chr18	-	443	3	ISM	ENSMUSG00000048799.9	ENSMUST00000237062.2	3261	20	13367	38993	13009	-38993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTCACAGTAGAAGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	53864313	53857559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_53857654_53860618_53860817_53864162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012485	chr18	-	718	3	ISM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	20	55826	20	-52982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTCCTTTTGGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	53877302	53871548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_53871665_53873123_53873281_53876857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012486	chr18	+	254	2	ISM	ENSMUSG00000073563.4	ENSMUST00000237880.2	2180	13	211	57891	182	-57891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCTGAGAAGACAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	53995470	54028654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_53995673_54028602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012487	chr18	+	247	2	ISM	ENSMUSG00000073563.4	ENST00000361991.6	2226	12	23062	24061	23062	-23383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCTTAGGCCACATGT	NA	NA	NA	NA	NA	NA	NA	NA	54051880	54063162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_54052106_54063140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012488	chr18	+	1017	2	ISM	ENSMUSG00000073563.4	ENST00000361991.6	2226	12	52298	0	52298	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTTAAGAGCCTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	54081116	54087223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_54081227_54086316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012489	chr18	+	217	1	Genic_Genomic	ENSMUSG00000073563.4	novel	NA	NA	NA	NA	59818	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTTTTAAATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54088636	54088853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_54088600_54088900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012490	chr18	-	310	1	ISM	ENSMUSG00000052713.10	ENSMUST00000064763.7	6095	10	101796	13	100245	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTTTAATAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	55021442	55021132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_55021100_55021400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012491	chr18	-	522	3	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	96712	735	96712	-735	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTCGCACACACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	55024975	55021867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_55022154_55022885_55022968_55024821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012492	chr18	-	413	3	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	93988	1753	93988	-1753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATTCCTGACACCTG	NA	NA	NA	NA	NA	NA	NA	NA	55027699	55022885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_55022968_55024821_55024976_55027522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012493	chr18	-	513	3	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	93110	3789	93110	-3789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACTCCCCCTTCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	55028577	55024921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_55024976_55027522_55027696_55028291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012494	chr18	-	620	3	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	41805	7303	41805	-7303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACGAGTGGCCGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	55079882	55028435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_55028710_55033284_55033373_55079624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012495	chr18	-	528	2	ISM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	735	58490	735	-58490	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTTTTATTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	55120952	55079622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_55079881_55120682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012496	chr18	+	1072	2	ISM	ENSMUSG00000001700.11	ENSMUST00000070166.6	2605	14	65188	227	65188	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTATGGGTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	56630391	56636637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_56630486_56635659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012497	chr18	-	804	1	ISM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	47426	0	36706	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTTTTTTCTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	56658597	56657793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_56657800_56658600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012498	chr18	+	1098	4	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	0	3346	0	-2823	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAAGGTAAAGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	56705893	56717438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012499	chr18	+	1412	4	ISM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	2856	0	2856	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTGTCTGTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56708749	56720784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_56709121_56713251_56713373_56717362_56717447_56719948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012500	chr18	+	838	1	NIC	ENSMUSG00000008301.12	novel	1942	5	NA	NA	14053	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTGTCTGTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56719946	56720784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_56719900_56720800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012501	chr18	-	1103	1	Genic_Genomic	ENSMUSG00000024592.16	novel	NA	NA	NA	NA	18424	5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGGTAGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	57090002	57088899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_57088900_57090000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012502	chr18	-	1242	3	ISM	ENSMUSG00000024592.16	ENSMUST00000139243.9	726	6	12837	-760	12837	760	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGAACTTTTCCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	57095589	57089925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_57090994_57091594_57091652_57095472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012503	chr18	+	2699	3	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	26928	1204	26928	-1204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCAACTTATGCGATG	NA	NA	NA	NA	NA	NA	NA	NA	57514740	57524824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_57514804_57517245_57517349_57522291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012504	chr18	+	2607	1	ISM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	35609	0	35609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	57523421	57526028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_57523400_57526000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012505	chr18	+	793	3	FSM	ENSMUSG00000069372.4	ENST00000379445.7	790	3	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACACAGTAGGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	57601570	57610428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_57601909_57605656_57605769_57610085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012506	chr18	+	1913	4	ISM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	11779	1095	11765	1089	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCACATATCAGATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	58804316	58812345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_58804400_58804519_58804724_58806321_58806439_58810836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012507	chr18	+	1813	1	Genic_Genomic	ENSMUSG00000024601.10	novel	NA	NA	NA	NA	19082	6	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCCTGTGTATTGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	58811633	58813446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_58811600_58813400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012508	chr18	+	386	1	Genic_Genomic	ENSMUSG00000073554.4	novel	NA	NA	NA	NA	596	339	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATCATTGGTTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	60559959	60560345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_60560000_60560300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012509	chr18	-	745	1	ISM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	27052	0	27052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTGTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	60608007	60607262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_60607300_60608000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012510	chr18	-	1308	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	22	660	22	-660	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATCCCTGCTCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	60635037	60607922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_60608658_60634464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012511	chr18	+	309	2	FSM	ENSMUSG00000024603.9	ENSMUST00000223590.2	1530	2	75	1146	75	-1146	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTTGAGGCAGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	60659360	60659904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_60659438_60659672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012512	chr18	+	236	1	ISM	ENSMUSG00000024603.9	ENSMUST00000223590.2	1530	2	1529	0	1529	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTACAAAGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	60660814	60661050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_60660800_60661000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012513	chr18	+	693	3	ISM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	26658	1227	26629	-1227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTCACAGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	60685914	60689784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_60686025_60688178_60688277_60689299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012514	chr18	+	488	2	ISM	ENSMUSG00000024603.9	ENSMUST00000223984.2	2948	14	28913	1331	28884	-1331	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTCTGACACTTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	60688169	60689680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_60688277_60689299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012515	chr18	+	489	1	ISM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	32077	0	32064	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTTTCACAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	60691349	60691838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_60691300_60691800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012516	chr18	-	531	1	NIC	ENSMUSG00000054008.10	novel	5262	3	NA	NA	24025	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCTGTCCTCCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	60822436	60821905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_60821900_60822400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012517	chr18	-	717	3	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	22098	2887	22098	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGATGTCCCCTCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	60824363	60821936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_60822437_60823035_60823139_60824249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012518	chr18	-	553	4	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	13699	9384	13699	-6527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACCGGGCTTATTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	60832762	60828433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_60828583_60830138_60830263_60831510_60831608_60832579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012519	chr18	-	528	4	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	12894	11089	12894	-8232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGCCTTCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	60833567	60830138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_60830263_60831510_60831608_60832579_60832763_60833443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012520	chr18	-	741	4	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	5458	16814	5458	-13957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCACAATGGCATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	60841003	60835863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_60836031_60836808_60836964_60838147_60838236_60840672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012521	chr18	-	1044	2	ISM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	110	21631	110	-18774	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAAGGTAAGGAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	60846351	60840680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_60841168_60845794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012522	chr18	-	688	2	ISM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	2	24317	2	-24317	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGCGTTTTTGTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	60869892	60846223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_60846697_60869677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012523	chr18	+	763	6	NNC	ENSMUSG00000024608.12	novel	755	6	NA	NA	1	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTGGTGTTGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	60880221	60911622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_60880298_60907581_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012524	chr18	+	785	6	FSM	ENSMUSG00000024608.12	ENSMUST00000235603.2	785	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTGGTTCTGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	60880742	60911615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_60880848_60907581_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012525	chr18	+	581	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60907676	60911618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_60907759_60909472_60909624_60910001_60910164_60910891_60910962_60911502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012526	chr18	+	470	2	ISM	ENSMUSG00000024608.12	ENSMUST00000122279.2	667	4	6	1453	6	-1449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAAGATGGGGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	60909316	60910164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_60909624_60910001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012527	chr18	+	184	2	ISM	ENSMUSG00000024617.17	ENSMUST00000115297.8	499	3	26	2016	26	-2016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTTACCGCACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	61058822	61074452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61058913_61074358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012528	chr18	+	155	2	ISM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	15637	38640	15562	3649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCCTGGGGAGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	61074358	61080117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61074454_61080057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012529	chr18	+	134	2	ISM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	26484	33333	-11420	8956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGTGAGTAACCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	61085205	61085424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61085272_61085356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012530	chr18	+	177	2	ISM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	26631	30049	-11273	12240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGAGTGGGGCGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	61085352	61088708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61085430_61088608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012531	chr18	+	181	2	ISM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	29888	28503	-8016	13786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGTAAGTCCAATCCGG	NA	NA	NA	NA	NA	NA	NA	NA	61088609	61090254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61088712_61090175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012532	chr18	+	180	2	ISM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	31453	28291	-6451	13998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTTGCTCCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	61090174	61090466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61090260_61090371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012533	chr18	+	166	2	ISM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	31654	27470	-6250	14819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAACGCATCACGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	61090375	61091287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61090467_61091212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012534	chr18	+	220	2	ISM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	52288	1218	14338	-396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGACCCGCGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	61111009	61117539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61111088_61117397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012535	chr18	+	258	2	ISM	ENSMUSG00000024617.17	ENSMUST00000115295.9	979	7	20866	-36	20820	36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCACCTATGTACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	61117491	61117971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61117627_61117848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012536	chr18	+	146	1	ISM	ENSMUSG00000024617.17	ENSMUST00000102888.10	4970	18	59923	2466	21941	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTTTTAACCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	61118612	61118758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61118600_61118800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012537	chr18	+	261	2	ISM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	22971	16103	22971	-16103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGAGTGCCCCACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	61201242	61202025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61201292_61201813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012538	chr18	+	240	2	ISM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	27428	11711	27428	-11711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCACCCGCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	61205699	61206417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61205835_61206312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012539	chr18	+	246	2	ISM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	28428	8403	28428	-8403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGGGGTTCTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	61206699	61209725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61206811_61209590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012540	chr18	+	283	2	ISM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	32415	6409	32415	-6409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTATGGTCCTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	61210686	61211719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61210851_61211600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012541	chr18	+	244	2	ISM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	33328	6055	33328	-6055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGACTTCACCATCCGT	NA	NA	NA	NA	NA	NA	NA	NA	61211599	61212073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61211720_61211949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012542	chr18	+	220	1	ISM	ENSMUSG00000024620.12	ENSMUST00000025522.11	5407	23	39692	0	39642	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGATTTCTCAGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	61217913	61218133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61217900_61218100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012543	chr18	-	5037	1	ISM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	13657	0	2414	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTAGTGCTGGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	61331027	61325990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_61326000_61331000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012544	chr18	-	5073	2	ISM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	9304	2295	-1939	2008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCATATGCTCACGTTG	NA	NA	NA	NA	NA	NA	NA	NA	61335380	61328285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_61332731_61334752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012545	chr18	-	974	1	FSM	ENSMUSG00000091957.4	ENSMUST00000170335.4	965	1	-4	-5	-4	5	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGCAGAGATGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	61393047	61392073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_61392100_61393000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012546	chr18	+	504	3	ISM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	286	13726	-85	-13726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCGAACTTTTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	61688674	61701461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61688945_61689573_61689681_61701334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012547	chr18	+	212	2	ISM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	12960	12554	12589	-12554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTAAATGCTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	61701348	61702633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61701462_61702534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012548	chr18	+	313	3	ISM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	14143	5539	13772	-5539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAAGGTATAGTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	61702531	61709648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61702634_61708480_61708621_61709577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012549	chr18	+	298	3	ISM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	20089	4863	19718	-4863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGCATGATGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	61708477	61710324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61708621_61709577_61709657_61710248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012550	chr18	+	264	3	ISM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	21187	3342	20816	-3342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTGTTAAGATATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	61709575	61711845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61709657_61710248_61710324_61711737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012551	chr18	+	336	3	ISM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	21858	1626	21487	-1626	internal_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGCCAAGAACCAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	61710246	61713561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61710324_61711737_61711845_61713409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012552	chr18	+	373	2	ISM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	24989	544	24639	107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGTAGTGAAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	61713398	61720709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61713559_61720496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012553	chr18	+	342	2	ISM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	24653	-126	24653	126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCGGTTTTCTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	61713412	61720728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61713523_61720496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012554	chr18	+	270	1	ISM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	32767	1751	32352	6	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATTTTTTTAAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	61721111	61721381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_61721100_61721400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012555	chr18	+	292	1	Genic_Genomic	ENSMUSG00000024576.15	novel	NA	NA	NA	NA	34083	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGAGGCTGGTTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	61722842	61723134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_61722800_61723100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012556	chr18	-	444	1	Genic_Genomic	ENSMUSG00000024579.8	novel	NA	NA	NA	NA	10356	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTATTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61830350	61829906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_61829900_61830400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012557	chr18	-	484	2	ISM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	9130	798	9130	-798	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGGCCGCCGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	61831576	61830705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_61831048_61831434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012558	chr18	-	438	1	ISM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	13462	0	6994	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGAGTTCTCTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	61845932	61845494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_61845500_61845900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012559	chr18	-	575	3	FSM	ENSMUSG00000024580.9	ENST00000448626.1	565	3	-3	-7	-3	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCACTGGAACCAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	61852929	61848830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_61849167_61851824_61851907_61852772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012560	chr18	-	541	3	NNC	ENSMUSG00000024580.9	novel	565	3	NA	NA	20	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGGTCACTGGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	61852906	61848836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_61849167_61851824_61851895_61852765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012561	chr18	-	558	3	NNC	ENSMUSG00000024580.9	novel	565	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTCACTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	61852926	61848837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_61849160_61851824_61851907_61852772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012562	chr18	-	534	3	NNC	ENSMUSG00000024580.9	novel	565	3	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTCACTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	61852891	61848837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_61849167_61851824_61851907_61852768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012563	chr18	-	500	3	NNC	ENSMUSG00000024580.9	novel	565	3	NA	NA	60	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTCACTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	61852866	61848837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_61849167_61851824_61851902_61852772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012564	chr18	-	478	3	ISM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	6466	3464	-2	-121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGGTGTTGGGGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	61852928	61848958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_61849199_61851824_61851907_61852772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012565	chr18	-	798	1	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	27836	0	27836	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGCAGTCACCTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	61863964	61863166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_61863200_61864000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012566	chr18	-	1057	3	ISM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	22984	465	22984	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTCCTGGGACTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	61868816	61863631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_61864382_61866774_61866904_61868638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012567	chr18	-	1272	1	Genic_Genomic	ENSMUSG00000032735.16	novel	NA	NA	NA	NA	14054	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTAAAGACTAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	61933663	61932391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_61932400_61933700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012568	chr18	-	1447	5	NNC	ENSMUSG00000032735.16	novel	1069	8	NA	NA	3313	-821	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGTTCTTTCCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	61944404	61933286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_61934480_61938136_61938218_61939447_61939519_61941450_61941530_61944381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012569	chr18	-	670	4	ISM	ENSMUSG00000032735.16	ENST00000517451.5	1069	8	22	7689	22	-7646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTCTGCCTGCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	61947695	61942002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_61942033_61944381_61944530_61946612_61946678_61947268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012570	chr18	-	938	1	FSM	ENSMUSG00000045730.5	ENSMUST00000053640.5	2144	1	1206	0	1206	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTGCACCCGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	62311824	62310886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_62310900_62311800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012571	chr18	+	961	2	FSM	ENSMUSG00000054589.2	ENSMUST00000067743.2	962	2	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTAAATATTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	62313198	62317477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_62313675_62316992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012572	chr18	+	1367	3	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	104203	616	87048	505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGAAGAGAGATCCGT	NA	NA	NA	NA	NA	NA	NA	NA	62561168	62598223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_62561248_62570453_62571023_62597504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012573	chr18	+	831	1	ISM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	141043	0	123888	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCATCTGTGCAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	62598008	62598839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_62598000_62598800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012574	chr18	-	148	1	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	36790	17	36790	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTTAGTAAAAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	62637297	62637149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62637100_62637300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012575	chr18	-	224	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	35427	710	35427	-617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGTAGTAGCGATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	62638660	62637842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62637952_62638545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012576	chr18	-	219	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	34975	1412	34975	-1319	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATGACCTGATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	62639112	62638544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62638660_62639008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012577	chr18	-	255	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	34264	1874	34264	-1781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTACCTAGACTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	62639823	62639006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62639113_62639674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012578	chr18	-	314	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	33015	2542	33015	-2449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGGCCCCGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	62641072	62639674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62639821_62640904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012579	chr18	-	258	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	30202	3786	30202	-3693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAATGCAGCAGGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	62643885	62640918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62641072_62643780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012580	chr18	-	184	2	NNC	ENSMUSG00000042211.8	novel	3483	20	NA	NA	30244	-3718	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGAACCGGATCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	62643843	62640943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_62641065_62643780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012581	chr18	-	206	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	29900	6648	29900	-6555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTACCTGGGGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	62644187	62643780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62643884_62644084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012582	chr18	-	253	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	23889	6964	23889	-6871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCACGTACAGGTAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	62650198	62644096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62644186_62650034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012583	chr18	-	274	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	22404	12929	22404	-12836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGGACAGTCCAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	62651683	62650061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62650215_62651562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012584	chr18	-	266	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	21118	14429	21118	-14336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTGTCAGTCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	62652969	62651561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62651683_62652824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012585	chr18	-	286	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	20188	15766	20188	-15673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGATGATTCGGATGACG	NA	NA	NA	NA	NA	NA	NA	NA	62653899	62652898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62653039_62653753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012586	chr18	-	291	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	18496	16644	18496	-16551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTCCGTGAGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	62655591	62653776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62653897_62655420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012587	chr18	-	278	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	14752	18314	14752	-18221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAACCCATACAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	62659335	62655446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62655592_62659202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012588	chr18	-	346	3	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	11345	22069	11345	-21976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCATCATGCTTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	62662742	62659201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62659334_62660247_62660342_62662622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012589	chr18	-	260	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	10189	25507	10189	-25414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCTGGAGATCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	62663898	62662639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62662761_62663759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012590	chr18	-	306	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	7341	26626	7341	-26533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTATACAGTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	62666746	62663758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62663898_62666579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012591	chr18	-	315	2	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	6953	29461	6953	-29368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTAGTTGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	62667134	62666593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62666746_62666971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012592	chr18	-	451	3	ISM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	-16	29838	-16	-29745	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCTGCTGGAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	62674103	62666970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62667136_62669186_62669321_62673951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012593	chr18	-	225	2	ISM	ENSMUSG00000042211.8	ENST00000296701.10	3600	21	10	36837	10	-36759	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCACATGAAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	62681811	62673984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_62674118_62681719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012594	chr18	-	224	1	ISM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	31120	0	31005	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTGTTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	63794388	63794164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_63794200_63794400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012595	chr18	-	441	3	ISM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	18228	3064	18113	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTAATCGTGATACATG	NA	NA	NA	NA	NA	NA	NA	NA	63807280	63797228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_63797404_63804652_63804758_63807119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012596	chr18	-	246	2	ISM	ENSMUSG00000024583.4	ENSMUST00000025476.4	1998	9	16806	10682	16806	-9943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAACATTTCGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	63808587	63807119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_63807293_63808514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012597	chr18	-	195	2	ISM	ENSMUSG00000024583.4	ENSMUST00000025476.4	1998	9	15321	12075	15321	-11336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGGGCAGTCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	63810072	63808512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_63808585_63809949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012598	chr18	-	299	2	ISM	ENSMUSG00000024583.4	ENSMUST00000025476.4	1998	9	12794	13512	12794	-12773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGAGTGCTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	63812599	63809949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_63810073_63812423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012599	chr18	-	459	3	ISM	ENSMUSG00000024583.4	ENSMUST00000025476.4	1998	9	59	15986	59	-15247	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTCATCAGAGGCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	63825334	63812423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_63812598_63815281_63815379_63825146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012600	chr18	+	426	2	ISM	ENSMUSG00000040560.11	ENSMUST00000235648.2	2067	12	30433	272	18913	-272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCCCCGGAAAACTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	63872198	63873297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_63872425_63873097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012601	chr18	+	412	2	ISM	ENSMUSG00000040560.11	ENST00000254442.8	6369	28	34821	228960	34821	20288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTTGTATGTAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	63888106	63893857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_63888303_63893641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012602	chr18	+	431	2	ISM	ENSMUSG00000040560.11	ENST00000254442.8	6369	28	40487	211872	40487	37376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGGGCCAGCAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	63893772	63910945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_63893857_63910598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012603	chr18	+	408	2	ISM	ENSMUSG00000040560.11	ENST00000254442.8	6369	28	145068	85533	145068	-85533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTACGTGTGGGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	63998353	64037284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_63998578_64037100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012604	chr18	+	381	1	ISM	ENSMUSG00000040560.11	ENSMUST00000072726.7	7135	28	280681	30	269151	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGTACTAAAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	64122436	64122817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_64122400_64122800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012605	chr18	-	3209	1	ISM	ENSMUSG00000024588.11	ENSMUST00000235766.3	6427	11	32928	0	32832	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGCTGTTGCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	64589193	64585984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_64586000_64589200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012606	chr18	-	1259	3	ISM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	27376	-79	27267	79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCACCAGGAAATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	64594758	64590256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_64591289_64591725_64591786_64594591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012607	chr18	-	1497	5	ISM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	12157	-13	12064	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTTATTTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	64637522	64632715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012608	chr18	-	487	1	ISM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	16519	0	16382	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGACTTATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	64633204	64632717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_64632700_64633200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012609	chr18	-	491	4	ISM	ENSMUSG00000024587.11	ENSMUST00000236186.2	1784	15	11468	932	11468	-932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAACCAATCCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	64638118	64634905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_64634947_64636578_64636693_64637408_64637545_64637918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012610	chr18	-	560	3	ISM	ENSMUSG00000024587.11	ENSMUST00000236186.2	1784	15	11135	3435	11135	-3435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTAGTGTCGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	64638451	64637408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_64637545_64637918_64638119_64638227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012611	chr18	-	570	4	ISM	ENSMUSG00000024587.11	ENSMUST00000236186.2	1784	15	7212	3943	7212	-3943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATTGTCTTACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	64642374	64637916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_64638119_64638227_64638450_64640842_64640930_64642315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012612	chr18	-	461	4	ISM	ENSMUSG00000024587.11	ENSMUST00000236186.2	1784	15	5984	4252	5984	-4252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCCTGCCTGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	64643602	64638225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_64638450_64640842_64640930_64642315_64642387_64643523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012613	chr18	+	675	2	FSM	ENSMUSG00000024589.19	ENST00000617539.1	662	2	-10	-3	-10	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAACGGTTGGTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	65020917	65021866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_65021167_65021440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012614	chr18	+	646	2	NNC	ENSMUSG00000024589.19	novel	662	2	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGCCACACCCCCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	65020927	65021854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_65021167_65021447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012615	chr18	+	273	3	ISM	ENSMUSG00000024589.19	ENST00000675865.1	4454	28	28	134394	28	-132840	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTATTTGACGAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	65156855	65213117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65157061_65210768_65210808_65213088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012616	chr18	+	687	3	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	703	58021	703	-57591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTCCTGCGACCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	65217269	65288366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65217866_65276866_65276918_65288326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012617	chr18	+	285	2	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	74347	51686	74347	-51256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTGGAGAAGGCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	65290913	65294701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65291083_65294585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012618	chr18	+	288	2	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	89418	39106	89418	-38676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTGACCATAACACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	65305984	65307281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65306107_65307115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012619	chr18	+	278	2	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	90547	34320	90547	-33890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATACTCCAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	65307113	65312067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65307314_65311989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012620	chr18	+	276	2	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	109580	18211	109580	-17781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACCATTTGTCCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	65326146	65328176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65326377_65328130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012621	chr18	+	265	3	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	111564	14614	111564	-14184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACGAAGAGAACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	65328130	65331773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65328253_65328985_65329057_65331701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012622	chr18	+	242	3	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	112418	9367	112418	-8937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTATGCACGTACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	65328984	65337020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65329057_65331701_65331798_65336946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012623	chr18	+	865	3	ISM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	126171	-176	126171	88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCATAATATTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	65342737	65346563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65342821_65343333_65343407_65345854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012624	chr18	+	535	1	NIC	ENSMUSG00000024589.19	novel	3792	31	NA	NA	129287	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	65345853	65346388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_65345900_65346400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012625	chr18	+	743	1	ISM	ENSMUSG00000024589.19	ENST00000676024.1	4302	28	325803	0	130202	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTATTTTTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	65346768	65347511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_65346800_65347500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012626	chr18	-	198	1	Genic_Genomic	ENSMUSG00000024519.7	novel	NA	NA	NA	NA	28818	2	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGAGGAGCTTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	66074385	66074187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_66074200_66074400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012627	chr18	-	517	3	FSM	ENSMUSG00000024519.7	ENST00000587244.5	1004	3	29	458	29	-458	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAGCTGGGAAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66103174	66074647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_66074828_66100513_66100628_66102951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012628	chr18	-	1120	1	ISM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	20766	16	20748	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTCCTCCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	66114944	66113824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_66113800_66114900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012629	chr18	-	1371	3	ISM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	14716	226	14716	-226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCCAGAGTTAGTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	66120976	66115860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_66116959_66117223_66117346_66120825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012630	chr18	+	1351	2	ISM	ENSMUSG00000024521.9	ENSMUST00000236933.2	1012	3	2247	-381	2247	381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGATGATCTTATATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	66593910	66597532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_66594070_66596340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012631	chr18	+	1260	1	ISM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	5768	0	5708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTTTCTGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66597371	66598631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_66597400_66598600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012632	chr18	+	2477	2	FSM	ENSMUSG00000117798.2	ENSMUST00000237275.2	2593	2	35	81	35	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACTTATTGTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	67107270	67110155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_67108076_67108483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012633	chr18	+	2381	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	144	-1	144	1	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTATTTCCTCGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	67338580	67340961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_67338600_67341000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012634	chr18	-	144	1	ISM	ENSMUSG00000062526.5	ENSMUST00000073054.5	2494	11	20644	0	12412	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGGATCTTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	67358257	67358113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67358100_67358300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012635	chr18	-	707	3	ISM	ENSMUSG00000062526.5	ENST00000309976.13	1244	7	9477	0	9477	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGACACTACCACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	67361192	67358498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67358956_67359853_67359995_67361083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012636	chr18	-	185	2	ISM	ENSMUSG00000062526.5	ENST00000557286.2	911	7	9884	75	9884	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGAGGAGCCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	67360785	67359927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67359995_67360667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012637	chr18	-	149	2	ISM	ENSMUSG00000062526.5	ENSMUST00000073054.5	2494	11	17958	2597	9726	-858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAGAAATATGATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	67360943	67360710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67360791_67360874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012638	chr18	-	629	5	ISM	ENSMUSG00000062526.5	ENST00000557286.2	911	7	17	1231	17	-1231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGACCTCTGCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	67370652	67361083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012639	chr18	+	652	1	ISM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	32635	0	32635	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTCGCCACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	67454890	67455542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67454900_67455500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012640	chr18	+	1301	5	FSM	ENSMUSG00000001473.8	ENST00000591208.1	1270	5	-25	-6	-2	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGAGCCATAAGATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	67523784	67535443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379_67534413_67534495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012641	chr18	+	284	3	ISM	ENSMUSG00000001473.8	ENST00000592683.5	437	4	51	8285	37	-8285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTCGTTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	67523846	67526152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67523885_67524394_67524504_67526015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012642	chr18	+	353	3	ISM	ENSMUSG00000001473.8	ENST00000592683.5	437	4	595	-1	581	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATTCGGTGCTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	67524390	67534438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67524504_67526015_67526152_67534334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012643	chr18	+	1081	3	NNC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	581	-103	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGAGTAACATGAATGACC	NA	NA	NA	NA	NA	NA	NA	NA	67524390	67535334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_67524504_67526015_67526127_67534477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012644	chr18	+	411	3	ISM	ENSMUSG00000001473.8	ENST00000591208.1	1270	5	608	844	608	156	intron_retention	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACCTTCAGCGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	67524417	67534593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67524504_67526015_67526127_67534379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012645	chr18	+	1127	3	NNC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	649	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAGGGAGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67524458	67535439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_67524504_67526015_67526127_67534468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012646	chr18	-	1075	2	Antisense	novelGene_ENSMUSG00000001473.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAAGGGAAAAAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	67535439	67526015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr18_-_67526138_67534486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012647	chr18	+	235	2	NNC	ENSMUSG00000001473.8	novel	437	4	NA	NA	2206	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGATTCGGTGCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	67526015	67534437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_67526152_67534338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012648	chr18	+	227	2	NNC	ENSMUSG00000001473.8	novel	437	4	NA	NA	2211	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGATTCGGTGCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	67526020	67534437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_67526152_67534341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012649	chr18	+	1056	2	NNC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	2229	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAGGGAGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67526038	67535439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_67526127_67534471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012650	chr18	+	1033	2	NIC	ENSMUSG00000001473.8	novel	1270	5	NA	NA	2253	2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAGGGAGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67526062	67535439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_67526152_67534495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012651	chr18	+	103	1	NIC	ENSMUSG00000001473.8	novel	1758	4	NA	NA	10525	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGATTCGGTGCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	67534334	67534437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_67534300_67534400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012652	chr18	+	946	1	ISM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	10707	380	10684	2	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAATAGGGAGCCATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	67534493	67535439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67534500_67535400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012653	chr18	+	268	1	Genic_Genomic	ENSMUSG00000001473.8	novel	NA	NA	NA	NA	11743	1	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTCTCTTGAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	67535552	67535820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_67535600_67535800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012654	chr18	-	585	1	Genic_Genomic	ENSMUSG00000024527.11	novel	NA	NA	NA	NA	43828	4	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTGCCATGTTGTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	67538414	67537829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_67537800_67538400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012655	chr18	-	543	2	ISM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	41709	406	41709	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGCTGAGGGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	67540533	67538239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67538585_67540335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012656	chr18	+	335	4	FSM	ENSMUSG00000024530.9	ENST00000590956.5	332	4	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTCAGGACAGGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	67597960	67610141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_67598027_67606810_67606901_67609864_67609936_67610033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012657	chr18	+	874	2	ISM	ENSMUSG00000024530.9	ENSMUST00000025411.9	1404	7	13090	0	13066	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGCAACTCTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	67611025	67612905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67611132_67612137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012658	chr18	-	491	1	ISM	ENSMUSG00000024533.18	ENSMUST00000045105.13	5033	15	62428	1594	58959	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCAGCTGTTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	67623363	67622872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67622900_67623400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012659	chr18	-	536	2	ISM	ENSMUSG00000024533.18	ENSMUST00000224799.2	2059	14	54034	103	54034	-103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCCTAAAACTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	67628288	67624162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67624620_67628209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012660	chr18	-	408	1	ISM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	23128	1	23006	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTTTTGGATGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	67751278	67750870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67750900_67751300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012661	chr18	+	274	2	ISM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	8	9709	6	-9709	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGAGCTCAGTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	67774676	67777523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67774806_67777378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012662	chr18	+	351	3	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	2707	5916	2707	-5916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCTGGCCTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	67777377	67781316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67777551_67779062_67779122_67781197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012663	chr18	+	297	2	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	6523	5216	6523	-5216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTTCTCAGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	67781193	67782016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67781317_67781842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012664	chr18	+	285	2	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	7182	889	7182	-889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTTTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	67781852	67786343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67782017_67786222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012665	chr18	+	294	2	ISM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	11550	106	11550	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGGGATGGGTTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	67786220	67787126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67786344_67786955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012666	chr18	+	200	1	Genic_Genomic	ENSMUSG00000024537.6	novel	NA	NA	NA	NA	12364	2	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGTTTTATCTGGAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	67787034	67787234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_67787000_67787200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012667	chr18	-	375	2	ISM	ENSMUSG00000118134.2	ENSMUST00000237968.2	580	4	10458	-1	10458	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGATGTCTGCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	67922555	67909101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_67909343_67922421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012668	chr18	+	689	3	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	14462	1960	14363	934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTAAAACAATAAGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	67922407	67926597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67922568_67924933_67925085_67926219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012669	chr18	+	570	1	ISM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	20042	0	19943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGTCTTATAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	67927987	67928557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_67928000_67928600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012670	chr18	+	2290	4	FSM	ENSMUSG00000024544.10	ENST00000679177.1	2033	4	-255	-2	-255	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTAGCACCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	68197315	68388718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_68197758_68368725_68368881_68383641_68383696_68387079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012671	chr18	+	482	3	ISM	ENSMUSG00000024544.10	ENST00000399848.7	2149	5	130487	19836	1	-18732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGTGGGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	68197571	68368880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_68197758_68239621_68239763_68368725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012672	chr18	+	2025	4	NNC	ENSMUSG00000024544.10	novel	2033	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTGTTTAGCACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	68197574	68388716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_68197758_68368725_68368881_68383645_68383696_68387079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012673	chr18	+	748	3	ISM	ENSMUSG00000024544.10	ENST00000399848.7	2149	5	172534	1188	42048	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAGTTTCAGCCGAACA	NA	NA	NA	NA	NA	NA	NA	NA	68239618	68387528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_68239763_68368725_68368881_68387079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012674	chr18	+	842	3	FSM	ENSMUSG00000024544.10	ENST00000586765.1	842	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGAGTGCACTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	68361062	68387613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_68361216_68368725_68368881_68387079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012675	chr18	+	1506	1	Genic_Genomic	ENSMUSG00000024544.10	novel	NA	NA	NA	NA	18485	2	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTAGCACCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	68387212	68388718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_68387200_68388700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012676	chr18	-	1133	4	FSM	ENSMUSG00000038121.7	ENST00000402563.5	1145	4	18	-6	18	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTTTGGGGGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	68433291	68401653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_68402024_68405633_68405746_68408832_68409337_68433144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012677	chr18	+	1421	1	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	23077	0	23032	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	68456502	68457923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_68456500_68457900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012678	chr18	+	239	2	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	21132	46236	21132	-46160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGGAAAGCTCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	69766646	69770033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_69766754_69769901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012679	chr18	+	261	2	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	24393	40183	24393	-40107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGTCCGCATGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	69769907	69776086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_69770036_69775953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012680	chr18	+	496	3	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	45298	5081	45298	-5005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGATCTAGGTAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	69790812	69811188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_69791022_69808769_69808906_69811037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012681	chr18	+	720	3	ISM	ENSMUSG00000053477.19	ENSMUST00000202474.4	1810	13	69154	-256	69154	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTGTAAGTCTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69814668	69816525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_69814870_69815753_69815895_69816147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012682	chr18	+	4860	1	ISM	ENSMUSG00000053477.19	ENSMUST00000114985.10	8577	20	339731	0	71776	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTAGTCTTTTAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	69817290	69822150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_69817300_69822200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012683	chr18	-	1220	3	FSM	ENSMUSG00000024512.5	ENSMUST00000025390.4	1225	3	6	-1	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGAGTCTTATATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	70377647	70373498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_70374387_70375075_70375157_70377396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012684	chr18	-	892	1	Genic_Genomic	ENSMUSG00000024512.5	novel	NA	NA	NA	NA	3263	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGAGTCTTATATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	70374390	70373498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_70373500_70374400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012685	chr18	-	749	6	FSM	ENSMUSG00000044906.7	ENST00000578138.5	748	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGATTTTATATGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	70605542	70586223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70605486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012686	chr18	-	1340	3	ISM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	508	14667	499	-14613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGACAATCCACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	70605043	70600877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_70601589_70602519_70602849_70604743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012687	chr18	-	1129	3	ISM	ENSMUSG00000038425.19	ENST00000406285.7	1954	9	12793	0	12640	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCGCCCCTCGGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	70650569	70642011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_70642816_70649864_70650068_70650447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012688	chr18	-	772	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	354786	-2	354786	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTTGATCACAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	71460604	71395873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_71396021_71432401_71432615_71439044_71439205_71454101_71454219_71460469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012689	chr18	-	668	4	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	346220	43166	346220	-43166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCATTTTCTTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	71469170	71439041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_71439205_71454101_71454219_71460469_71460697_71469009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012690	chr18	-	589	4	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	303489	104269	303489	-104269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCCATCCTCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	71511901	71500144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_71500311_71503721_71503830_71507543_71507683_71511725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012691	chr18	-	605	5	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	235913	111736	235913	-111736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGTGACCAAGAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71579477	71507611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_71507683_71511725_71511899_71517198_71517295_71553295_71553491_71579407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012692	chr18	-	563	4	ISM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	28	312266	28	-312266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTATGAAAATGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	71815362	71708141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_71708297_71720941_71721099_71812531_71812653_71815232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012693	chr18	-	756	1	Genic_Genomic	ENSMUSG00000024556.5	novel	NA	NA	NA	NA	34514	6	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCTTTTGTATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	73903723	73902967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_73903000_73903700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012694	chr18	-	827	2	ISM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	42208	180	31936	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACCCACTTTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	73906301	73903153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73903880_73906200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012695	chr18	-	418	4	ISM	ENSMUSG00000024556.5	ENST00000639255.1	1434	13	19331	-2	19331	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTATGCCACTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	73918906	73906196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73906300_73908449_73908521_73914112_73914216_73918765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012696	chr18	-	354	3	ISM	ENSMUSG00000024556.5	ENST00000639850.1	1482	13	13463	12566	13463	-12566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTGAGAATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	73924774	73918764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73918909_73921424_73921540_73924679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012697	chr18	-	314	3	ISM	ENSMUSG00000024556.5	ENST00000639255.1	1434	13	10616	18480	10616	-18480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTTTAAACCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73927621	73924678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73924778_73924871_73924982_73927516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012698	chr18	-	372	3	ISM	ENSMUSG00000024556.5	ENST00000639850.1	1482	13	10236	18665	10236	-18665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAAGACTTCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	73928001	73924863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73924982_73927516_73927621_73927851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012699	chr18	-	342	3	ISM	ENSMUSG00000024556.5	ENST00000639850.1	1482	13	8777	21318	8777	-21318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTATGAAGCCGACGG	NA	NA	NA	NA	NA	NA	NA	NA	73929460	73927516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73927621_73927851_73928014_73929384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012700	chr18	-	363	3	ISM	ENSMUSG00000024556.5	ENST00000639850.1	1482	13	7200	21666	7200	-21666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGATAACATGGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	73931037	73927864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73928014_73929384_73929461_73930899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012701	chr18	-	363	3	ISM	ENSMUSG00000024556.5	ENST00000639255.1	1434	13	3302	23185	3302	-23185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAAGAGCACACCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	73934935	73929383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73929461_73930899_73931050_73934799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012702	chr18	-	359	3	ISM	ENSMUSG00000024556.5	ENST00000639255.1	1434	13	41	24700	41	-24700	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTTATTTTTAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	73938196	73930898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_73931050_73934799_73934934_73938122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012703	chr18	-	1034	1	Genic_Genomic	ENSMUSG00000036223.17	novel	NA	NA	NA	NA	8063	6	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGTGGCTTCCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	74329397	74328363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_74328400_74329400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012704	chr18	-	1165	5	FSM	ENSMUSG00000036223.17	ENST00000285116.8	676	5	-1	-488	-1	488	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATATTCAGGCACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	74337461	74329484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_74330123_74330584_74330755_74332970_74333099_74335656_74335759_74337334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012705	chr18	-	682	5	ISM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	3390	1603	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGACTCGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	74337460	74329972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012706	chr18	-	672	5	NNC	ENSMUSG00000036223.17	novel	676	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGACTCGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	74337460	74329972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_-_74330123_74330584_74330755_74332970_74333095_74335656_74335759_74337334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012707	chr18	+	827	5	ISM	ENSMUSG00000025885.19	ENST00000449815.2	1132	8	2207	3343	2207	-3343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGGTCACTCAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	74869214	74892385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012708	chr18	+	938	6	ISM	ENSMUSG00000025885.19	ENST00000449815.2	1132	8	6535	0	6535	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCCTCAAGTGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	74873542	74895728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920_74894096_74895646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012709	chr18	+	778	5	NNC	ENSMUSG00000025885.19	novel	1132	8	NA	NA	8187	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCCTCAAGTGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	74875194	74895728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_74875279_74877691_74877843_74892097_74892384_74893920_74894096_74895646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012710	chr18	+	778	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGTCTAGTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75133547	75136455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012711	chr18	+	772	6	NNC	ENSMUSG00000062328.9	novel	775	7	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGTCTAGTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75133547	75136455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_75133615_75134261_75134350_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012712	chr18	+	980	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCTTTTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75138938	75143005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_75139086_75141721_75141898_75142348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012713	chr18	+	266	2	ISM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	76	1375	76	-816	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTCCAGCAATCCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	75139046	75141848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_75139186_75141721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012714	chr18	+	659	1	NIC	ENSMUSG00000036299.6	novel	979	3	NA	NA	3375	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75142345	75143004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_75142300_75143000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012715	chr18	+	172	1	ISM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	4081	0	4081	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGATGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75143051	75143223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_75143100_75143200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012716	chr18	+	415	3	ISM	ENSMUSG00000035765.11	ENST00000578396.1	499	4	6347	0	6347	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCTTCCGTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75196098	75215578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_75196245_75213273_75213400_75215435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012717	chr18	+	2806	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	1472	0	45	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGTTGTTCAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	75502071	75529006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012718	chr18	+	1625	2	ISM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	77742	-11	77742	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTAGCTGAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	76270270	76279525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_76271122_76278751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012719	chr18	+	2267	5	ISM	ENSMUSG00000024563.17	ENSMUST00000025453.15	2410	11	37341	-1043	35970	-237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCCATGAACTTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	76431532	76439408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012720	chr18	+	1791	1	ISM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	63208	4385	42296	4	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACACTGCTGGAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	76437858	76439649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_76437900_76439600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012721	chr18	+	3629	1	ISM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	65755	0	44843	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGAGTTGAGTATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	76440405	76444034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_76440400_76444000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012722	chr18	+	859	2	FSM	ENSMUSG00000091519.2	ENST00000400404.1	847	2	-10	-2	-10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGGAACACACAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	76946269	76950407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_76947054_76950332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012723	chr18	+	840	2	NNC	ENSMUSG00000091519.2	novel	847	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTGGGAACACACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76946281	76950405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_76947049_76950332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012724	chr18	-	828	2	Antisense	novelGene_ENSMUSG00000091519.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGCCATCTCCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	76950405	76946290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr18_-_76947061_76950347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012725	chr18	+	1137	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	-1	266	-1	-259	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGCATGCTGTAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	77017711	77029042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_77017913_77027263_77027366_77028208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012726	chr18	+	875	1	Genic_Genomic	ENSMUSG00000090000.3	novel	NA	NA	NA	NA	10696	3	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGATTTATGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	77028436	77029311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_77028400_77029300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012727	chr18	+	484	1	ISM	ENSMUSG00000025421.16	ENSMUST00000097521.12	1704	5	17441	2	17131	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATGAAAATGCTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	77049263	77049747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77049300_77049700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012728	chr18	+	911	3	ISM	ENSMUSG00000025421.16	ENSMUST00000026485.15	1640	8	20832	0	20779	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77052911	77059101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77052964_77054839_77054904_77058306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012729	chr18	+	788	1	ISM	ENSMUSG00000117732.2	ENSMUST00000142456.2	1853	9	40492	44	40492	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77058313	77059101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77058300_77059100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012730	chr18	+	792	1	ISM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	30424	0	30079	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATAAAATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77062211	77063003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77062200_77063000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012731	chr18	+	450	2	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	114	56200	114	-49337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCCCACCTTTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	77153017	77185296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77153116_77184944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012732	chr18	+	522	3	ISM	ENSMUSG00000025423.17	ENSMUST00000114776.4	2077	13	31648	26975	31519	-26975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTGATAGTTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	77185033	77207658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77185420_77193500_77193586_77207607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012733	chr18	+	378	1	ISM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	88215	0	87604	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCATAATTCTCATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	77241118	77241496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77241100_77241500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012734	chr18	-	198	1	Genic_Genomic	ENSMUSG00000025427.16	novel	NA	NA	NA	NA	2203	1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTAGTAGTGTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	77650629	77650431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_-_77650400_77650600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012735	chr18	-	334	2	FSM	ENSMUSG00000025427.16	ENST00000590330.1	1004	2	115	555	-69	-555	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGAAGGGAGGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	77652912	77650987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_77651147_77652737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012736	chr18	-	236	2	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	9262	-1	8522	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	77846218	77845266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_77845454_77846169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012737	chr18	-	188	1	NIC	ENSMUSG00000041840.9	novel	1226	10	NA	NA	9286	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTATCTGTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	77845454	77845266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_-_77845300_77845500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012738	chr18	-	321	3	FSM	ENSMUSG00000041840.9	ENST00000585518.5	315	3	-5	-1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGCTATGGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	77854745	77847135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_77847209_77848167_77848234_77854563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012739	chr18	-	180	2	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	6750	2910	6010	-1041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGAGGTAAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	77848730	77848177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_77848234_77848606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012740	chr18	-	399	3	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	3570	3337	2830	-1468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTATGAAGCGCTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	77851910	77848604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_77848731_77849681_77849817_77851772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012741	chr18	-	313	2	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	740	6505	0	-4636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTATTGTGATGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77854740	77851772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_77851909_77854563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012742	chr18	+	469	4	ISM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	10	3937	10	-3937	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGTTGGCGAGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	77861699	77866270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012743	chr18	+	435	3	ISM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	3540	3608	3540	-3608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGACTCAAAATCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	77865229	77866599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77865389_77866161_77866270_77866431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012744	chr18	+	426	3	ISM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	4470	3280	4470	-3280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTAGAGAGCTCTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	77866159	77866927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77866270_77866431_77866599_77866778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012745	chr18	+	376	3	ISM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	4835	2528	4835	-2528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGATGTCTTTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	77866524	77867679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77866599_77866778_77866928_77867526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012746	chr18	+	488	3	ISM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	5836	1413	5836	-1413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCTCTCTTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	77867525	77868794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77867679_77867778_77868004_77868684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012747	chr18	+	357	3	ISM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	6210	1151	6210	-1151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTTTTCATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	77867899	77869056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77868004_77868684_77868793_77868911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012748	chr18	+	400	3	ISM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	6993	564	6993	-564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGTATAAATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	77868682	77869643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77868793_77868911_77869057_77869498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012749	chr18	+	506	3	ISM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	7219	0	7219	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTAGTTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	77868908	77870207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77869057_77869498_77869650_77870000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012750	chr18	+	207	1	ISM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	8572	362	8311	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTAGTTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	77870000	77870207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_77870000_77870200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012751	chr18	+	2185	2	ISM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	32933	711	32933	-711	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTCCTTCATGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	80123037	80162143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_80123263_80160183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012752	chr18	+	2188	1	ISM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	70562	0	70562	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTACCGTGTGTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	80160666	80162854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_80160700_80162900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012753	chr18	-	887	4	ISM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	3294	-1	3294	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGTGTATACGCACA	NA	NA	NA	NA	NA	NA	NA	NA	80240579	80235478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012754	chr18	+	1691	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	-3	-5	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTTGTTGTGGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	80250009	80255952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012755	chr18	+	2870	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	80	1128	80	-1128	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGACCGAAAGCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	80250089	80267942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012756	chr18	+	1648	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	10	-8	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTACACGTTTGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	80250091	80255946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012757	chr18	+	1510	3	ISM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	249	88	-116	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTTGTAGCTCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	80250358	80255868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_80250559_80253276_80253346_80254627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012758	chr18	+	1501	3	NNC	ENSMUSG00000024571.16	novel	1683	4	NA	NA	-42	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTACACGTTTGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	80250432	80255946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_80250559_80253289_80253346_80254627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012759	chr18	+	1329	1	ISM	ENSMUSG00000024571.16	ENSMUST00000156400.9	1649	4	4648	0	4153	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGGGAATTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	80254627	80255956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_80254600_80256000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012760	chr18	+	2566	1	ISM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	16495	0	16495	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGTCATGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80266504	80269070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_80266500_80269100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012761	chr18	+	1198	3	ISM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	7176	216	7176	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCGCCAGATGGCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	80306708	80335711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_80306769_80326490_80326708_80334790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012762	chr18	+	954	1	ISM	ENSMUSG00000034006.18	ENSMUST00000123750.8	2004	5	36518	9	35445	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	80334977	80335931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_80335000_80335900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012763	chr18	-	286	1	ISM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	61451	0	32544	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTCTGGTGTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	80451459	80451173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80451200_80451500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012764	chr18	-	274	2	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	22008	37519	-6707	-37519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCGGATGGGCCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80490781	80489179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80489311_80490638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012765	chr18	-	335	2	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	20073	39046	-8642	-39046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCGCTGGGACAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	80492716	80490706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80490781_80492455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012766	chr18	-	324	2	ISM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	73	51513	73	-51513	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGAGTGTGGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	80512716	80503173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80503229_80512447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012767	chr18	-	1176	1	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	100411	382	100411	1	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAAGTTACTCCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	80650977	80649801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80649800_80651000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012768	chr18	-	1649	3	ISM	ENSMUSG00000033016.17	ENSMUST00000236310.2	4315	10	58209	691	58209	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTCAATTATAAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	80693179	80650110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80651241_80678905_80679292_80693046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012769	chr18	-	1188	3	ISM	ENSMUSG00000033016.17	ENSMUST00000035800.8	4505	8	9750	19567	9750	-17196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGATCCCGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	80741638	80710216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80710376_80725373_80725534_80740769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012770	chr18	-	1083	2	ISM	ENSMUSG00000033016.17	ENST00000587635.5	2084	8	8	47935	8	-47935	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCTCAAAGTAGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80756021	80740955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80741872_80755854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012771	chr18	-	1865	1	ISM	ENSMUSG00000024566.11	ENSMUST00000091790.5	5357	30	197978	0	181875	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCCTGGTCTTGGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80779220	80777355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80777400_80779200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012772	chr18	-	1849	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	178074	-1450	178074	-175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGGAAGCCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80783021	80777779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80779365_80781867_80782072_80782961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012773	chr18	-	340	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	167955	2667	167955	-2667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTGCTTTTCTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	80793140	80781896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80782072_80782961_80783020_80793033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012774	chr18	-	288	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	163866	16742	163866	-16742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAAACAGATGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80797229	80795971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80796038_80796206_80796363_80797163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012775	chr18	-	306	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	163491	17037	163491	-17037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTCTGCAGCACTTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80797604	80796266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80796363_80797163_80797229_80797459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012776	chr18	-	356	4	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	159531	17933	159531	-17933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTCTGTGCTTTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80801564	80797162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80797229_80797459_80797605_80799668_80799759_80801509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012777	chr18	-	330	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	155646	20471	155646	-20471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACTGGTTATATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80805449	80799700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80799759_80801509_80801609_80805276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012778	chr18	-	303	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	151984	26859	151984	-26859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGCATCAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	80809111	80806088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80806173_80808237_80808331_80808985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012779	chr18	-	462	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	140846	29038	140846	-29038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTACAATGATTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80820249	80808267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80808331_80808985_80809148_80820012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012780	chr18	-	507	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	122446	40781	122446	-40781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGCTTCTTTAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	80838649	80820010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80820250_80822067_80822191_80838504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012781	chr18	-	389	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	109105	42879	109105	-42879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGTCACGTCCTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	80851990	80822108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80822191_80838504_80838648_80851826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012782	chr18	-	317	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	81446	59342	81446	-59342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTCGGACCAGCACAAT	NA	NA	NA	NA	NA	NA	NA	NA	80879649	80838571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80838648_80851826_80851988_80879569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012783	chr18	-	386	4	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	70627	72607	70627	-72607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCATAAGGTATGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80890468	80851836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80851988_80879569_80879647_80887741_80887818_80890386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012784	chr18	-	272	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	8174	141311	8174	-141311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGGAAAAGGTTGATACA	NA	NA	NA	NA	NA	NA	NA	NA	80952921	80920540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80920589_80935029_80935139_80952806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012785	chr18	-	339	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	4929	155839	4929	-155839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATTCACAGTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	80956166	80935068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80935139_80952806_80952921_80956011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012786	chr18	-	432	3	ISM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	2	173584	2	-173584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCTGGTAAAATACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	80961093	80952813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_80952921_80956011_80956163_80960919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012787	chr18	-	515	1	ISM	ENSMUSG00000118057.2	ENSMUST00000235445.2	3579	4	24836	0	24836	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGCTATGTATAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	82354889	82354374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_82354400_82354900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012788	chr18	+	389	2	NNC	ENSMUSG00000041607.18	novel	369	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCGACTGGTTAAAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	82572650	82602435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_82572841_82602236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012789	chr18	+	372	3	FSM	ENSMUSG00000041607.18	ENST00000528160.1	369	3	2	-5	2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGTTAAAACTATTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	82572652	82602440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_82572794_82597156_82597184_82602236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012790	chr18	+	240	2	NNC	ENSMUSG00000041607.18	novel	1947	5	NA	NA	-3	55	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAAACTTTTAATTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	82572667	82602336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_82572808_82602236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012791	chr18	+	207	1	NIC	ENSMUSG00000041607.18	novel	2492	7	NA	NA	29526	2	mono-exon	FALSE	NA	NA	NA	NA	NA	551	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACTGGTTAAAACTATTC	NA	NA	NA	NA	NA	NA	NA	NA	82602230	82602437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_82602200_82602400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012792	chr18	+	241	1	ISM	ENSMUSG00000118012.2	ENSMUST00000236930.2	1875	2	6809	0	6809	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAAGATTATGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	82719220	82719461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_82719200_82719500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012793	chr18	-	632	1	ISM	ENSMUSG00000100430.3	ENST00000661349.1	1009	2	17787	0	-1096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGGTGCAAACCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	83099062	83098430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_83098400_83099100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012794	chr18	-	916	2	FSM	ENSMUSG00000100430.3	ENST00000661349.1	1009	2	44	49	44	-49	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATAACACTCAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	83116805	83098479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_-_83099090_83116499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012795	chr18	+	1449	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	61	1920	61	-480	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAGCTTGATGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	84106248	84113733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_84106499_84112534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012796	chr18	+	1278	1	ISM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	8188	0	7580	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACACTTCTTTCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	84114375	84115653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_84114400_84115700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012797	chr18	-	1093	4	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	11117	-568	11117	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGGTCTGACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	84688088	84685589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012798	chr18	-	626	1	ISM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	17608	4	12986	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	84686219	84685593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_84685600_84686200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012799	chr18	-	549	4	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	10235	504	10235	-504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGGGGTCCCCGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84688970	84686661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_84686811_84687055_84687198_84687921_84688087_84688877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012800	chr18	-	696	5	ISM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	7	1819	7	-1819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTCTCCATCAGGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	84699198	84687976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84699059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012801	chr18	+	831	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84869464	84897996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012802	chr18	+	729	4	NIC	ENSMUSG00000024646.15	novel	833	5	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84869558	84897996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_84869733_84889629_84889759_84891264_84891295_84897600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012803	chr18	+	690	3	NNC	ENSMUSG00000024646.15	novel	724	4	NA	NA	-31	-25	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATATATCTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84869567	84897962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_84869733_84889629_84889820_84897627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012804	chr18	+	673	3	NNC	ENSMUSG00000024646.15	novel	781	4	NA	NA	-24	-34	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGATCTTTTTAAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	84869574	84897953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_84869733_84889629_84889759_84897567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012805	chr18	+	357	3	FSM	ENSMUSG00000024646.15	ENST00000553543.2	346	3	-10	-1	-10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGTAGCTCTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	84869588	84897664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_84869733_84889629_84889779_84897600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012806	chr18	+	272	3	ISM	ENSMUSG00000024646.15	ENST00000494131.6	724	4	97	1996	97	-1671	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCTGTCTTTGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84869695	84895992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_84869733_84889629_84889759_84895886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012807	chr18	+	223	2	ISM	ENSMUSG00000024646.15	ENST00000553543.2	346	3	20018	2	19613	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGTAGCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	84889616	84897661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_84889779_84897600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012808	chr18	+	545	2	NNC	ENSMUSG00000024646.15	novel	781	4	NA	NA	19614	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTCTGTCTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	84889617	84897993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr18_+_84889759_84897589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012809	chr18	+	379	3	ISM	ENSMUSG00000024646.15	ENST00000494131.6	724	4	20057	185	19652	140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAACGTAATTGTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	84889655	84897803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_84889759_84895886_84895987_84897627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012810	chr18	+	390	3	ISM	ENSMUSG00000024646.15	ENST00000340533.9	781	4	20071	217	19666	-120	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTACTCTTCAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	84889669	84897867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_84889759_84891264_84891299_84897600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012811	chr18	+	366	1	Genic_Genomic	ENSMUSG00000024646.15	novel	NA	NA	NA	NA	27716	1	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGTCTCGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	84897719	84898085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr18_+_84897700_84898100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012812	chr18	-	600	1	ISM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	4734	0	4734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	84964915	84964315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_84964300_84964900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012813	chr18	-	652	2	ISM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	3586	1008	3586	-1008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTGTGCCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	84966063	84965323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_84965871_84965958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012814	chr18	+	473	3	FSM	ENSMUSG00000024647.15	ENST00000584764.5	538	3	2	63	2	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCACCTCCATCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	86729838	86734995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr18_+_86729902_86734400_86734521_86734705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012815	chr18	+	321	1	ISM	ENSMUSG00000024647.15	ENSMUST00000068423.10	2475	5	5503	1350	3565	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGACTATTGACAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	86734737	86735058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_86734700_86735100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012816	chr18	-	1831	1	ISM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	27323	0	27217	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTGTCATCAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	88885123	88883292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_88883300_88885100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012817	chr18	-	705	2	ISM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	7284	1796	7148	-1796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGATCTGCGGGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	88905192	88888414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_-_88889043_88905115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012818	chr18	+	473	6	ISM	ENSMUSG00000024614.8	ENST00000443099.6	531	7	2929	0	2929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGTAAGTTCTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	90532328	90546084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_90532369_90535517_90535642_90537228_90537275_90541653_90541754_90542404_90542483_90545999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012819	chr18	+	502	3	ISM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	26992	2955	25870	758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAACTGCATGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	90555269	90558436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_90555329_90556622_90556692_90558062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012820	chr18	+	442	1	ISM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	32672	0	31550	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTACCTTTAATATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	90560949	90561391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr18_+_90560900_90561400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012821	chr18	+	1694	1	NIC	ENSMUSG00000110277.3	novel	2003	4	NA	NA	11033	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAAGTGTTGTCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	90608952	90610646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr18_+_90609000_90610600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012822	chr19	+	546	3	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	58344	1621	58344	-1621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGAATCCCTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	3431628	3434112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3431724_3431931_3432025_3433754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012823	chr19	+	506	1	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	61943	0	61943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	3435227	3435733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3435200_3435700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012824	chr19	-	708	1	ISM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	119698	387	88224	3	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGGCGGATGGCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	3506022	3505314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3505300_3506000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012825	chr19	-	1074	3	ISM	ENSMUSG00000024908.16	ENST00000534534.5	2950	19	111024	0	79550	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTGTGGTTAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	3514696	3506249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3507052_3509360_3509481_3514544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012826	chr19	-	933	4	ISM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	77660	1191	77660	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTGGTTGTTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	3516586	3506508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3507052_3509360_3509481_3514519_3514696_3516492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012827	chr19	+	1644	3	FSM	ENSMUSG00000035372.3	ENSMUST00000235295.2	1643	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTGTGTGGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3758345	3767878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_3758437_3765637_3765803_3766490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012828	chr19	+	1149	3	ISM	ENSMUSG00000035372.3	ENSMUST00000235837.2	1875	4	5992	629	5992	-622	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGCCAGGTACACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3764402	3767251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3764626_3765637_3765803_3766490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012829	chr19	+	1017	1	Genic_Genomic	ENSMUSG00000035372.3	novel	NA	NA	NA	NA	8456	2	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGGGTCTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3766866	3767883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_3766900_3767900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012830	chr19	+	479	3	ISM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	40029	729	40029	-729	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGTGCAATAGCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	3942104	3943635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3942214_3942709_3942792_3943347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012831	chr19	+	494	1	ISM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	42079	0	41800	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3943875	3944369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3943900_3944400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012832	chr19	-	260	2	ISM	ENSMUSG00000001750.17	ENSMUST00000145791.8	2729	20	8817	27	8817	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAAAGAGCTGGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	3946413	3946076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3946193_3946269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012833	chr19	-	317	2	ISM	ENSMUSG00000001750.17	ENSMUST00000145791.8	2729	20	7549	1017	7549	-1017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCAGAGAAGGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	3947681	3947066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3947170_3947467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012834	chr19	-	225	2	ISM	ENSMUSG00000001750.17	ENSMUST00000145791.8	2729	20	7353	1527	7353	-1527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTCAGCTGCTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	3947877	3947576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3947682_3947757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012835	chr19	-	246	2	ISM	ENSMUSG00000001750.17	ENSMUST00000145791.8	2729	20	6353	2503	6353	-2503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGTAAGTGGGCATACT	NA	NA	NA	NA	NA	NA	NA	NA	3948877	3948552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3948639_3948717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012836	chr19	-	254	2	ISM	ENSMUSG00000001750.17	ENSMUST00000145791.8	2729	20	6110	2713	6110	-2713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGTTGGAGTGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3949120	3948762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3948876_3948979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012837	chr19	-	262	2	ISM	ENSMUSG00000001750.17	ENSMUST00000145791.8	2729	20	3194	2954	3194	-2954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGAAGGCTGCACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3952036	3949003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3949120_3951890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012838	chr19	-	249	2	ISM	ENSMUSG00000001750.17	ENSMUST00000145791.8	2729	20	2783	5841	2783	-5841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATCCATTGCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3952447	3951890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3952036_3952343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012839	chr19	-	228	2	ISM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	8	8535	8	-8535	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGGTGGGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	3957125	3954584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3954706_3957018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012840	chr19	-	211	1	NIC	ENSMUSG00000059734.8	novel	1005	7	NA	NA	3412	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGTTGTGTTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	3959076	3958865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_3958900_3959100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012841	chr19	-	721	6	ISM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	736	4	736	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	3961752	3958866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012842	chr19	-	521	3	ISM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	1407	4	1407	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	3961081	3958866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3959075_3959152_3959282_3960897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012843	chr19	-	267	2	ISM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	3197	84	3197	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCAGACCACTGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	3959291	3958946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3959075_3959152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012844	chr19	-	465	4	ISM	ENSMUSG00000059734.8	ENSMUST00000075092.8	983	7	5	2297	5	-2294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGGTACCAGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	3962729	3961163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3961257_3961565_3961617_3961688_3961747_3962466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012845	chr19	-	799	3	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	11662	0	11662	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACAGGTGTCTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3968146	3963490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3964085_3965293_3965394_3968041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012846	chr19	-	773	5	ISM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	8559	1833	8559	-1833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCAGCCTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3971249	3965323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012847	chr19	+	216	2	ISM	ENSMUSG00000036908.18	ENSMUST00000165711.3	1991	10	576	12997	576	-12997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGACATCGATAGCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	3985761	3986342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3985904_3986268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012848	chr19	+	202	2	ISM	ENSMUSG00000036908.18	ENSMUST00000165711.3	1991	10	1146	7709	1146	-7709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATGGCCATTGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	3986331	3991630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3986423_3991519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012849	chr19	+	198	2	ISM	ENSMUSG00000036908.18	ENSMUST00000165711.3	1991	10	6431	7322	6431	-7322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCTACAGGAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	3991616	3992017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3991682_3991884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012850	chr19	+	181	1	ISM	ENSMUSG00000036908.18	ENSMUST00000162708.7	2266	11	13974	0	13974	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTAGGTTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3999159	3999340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_3999200_3999300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012851	chr19	+	787	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4050579	4052103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012852	chr19	+	341	3	ISM	ENSMUSG00000024869.11	ENSMUST00000155405.8	3904	9	3001	1648	3001	-1648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGTAAGATCCAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	4053626	4054168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4053815_4053944_4054025_4054095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012853	chr19	+	263	3	ISM	ENSMUSG00000024869.11	ENSMUST00000155405.8	3904	9	3319	1383	3319	-1383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGACCCAGATCAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	4053944	4054433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4054025_4054095_4054168_4054322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012854	chr19	+	320	3	ISM	ENSMUSG00000024869.11	ENSMUST00000155405.8	3904	9	3468	1168	3468	-1168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGACTGAAGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	4054093	4054648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4054168_4054322_4054433_4054512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012855	chr19	-	187	2	Antisense	novelGene_ENSMUSG00000024871.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCCCAGACAGGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	4054648	4054379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_4054428_4054509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012856	chr19	+	235	3	ISM	ENSMUSG00000024869.11	ENSMUST00000155405.8	3904	9	3763	999	3763	-999	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTATCAAAGCTTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	4054388	4054817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4054433_4054512_4054649_4054762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012857	chr19	+	312	3	ISM	ENSMUSG00000024871.12	ENST00000514950.1	1104	10	944	556	944	-556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACAAACAGGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4054547	4056269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4054649_4054762_4054817_4056112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012858	chr19	+	216	2	ISM	ENSMUSG00000024871.12	ENSMUST00000025806.5	1469	11	1448	736	1157	-556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACAAACAGGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4054760	4056269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4054817_4056109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012859	chr19	+	342	3	ISM	ENSMUSG00000024871.12	ENST00000514950.1	1104	10	2504	174	2504	-174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAAACACGGGGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	4056107	4056651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4056268_4056357_4056440_4056551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012860	chr19	+	286	3	ISM	ENSMUSG00000024871.12	ENST00000514950.1	1104	10	2754	0	2754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCCCCCAACTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	4056357	4056825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4056440_4056551_4056649_4056718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012861	chr19	+	110	1	NIC	ENSMUSG00000024871.12	novel	1469	11	NA	NA	3113	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCCCCAACTTGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	4056716	4056826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_4056700_4056800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012862	chr19	-	363	2	ISM	ENSMUSG00000037916.15	ENSMUST00000237862.2	1619	10	4844	0	4816	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTCTTTTTGTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4057850	4057383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4057666_4057769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012863	chr19	-	822	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTCTTTGGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	4087985	4085405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012864	chr19	-	815	7	NNC	ENSMUSG00000060803.7	novel	821	7	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4087981	4085406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087291_4087397_4087584_4087621_4087862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012865	chr19	+	530	5	FSM	ENSMUSG00000024857.17	ENST00000353903.9	535	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCGGCCTGGAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	4133552	4137155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_4133645_4135558_4135694_4136217_4136328_4136447_4136596_4137110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012866	chr19	+	1084	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTGTGTGTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	4147179	4149019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012867	chr19	+	993	4	NNC	ENSMUSG00000024856.11	novel	1080	4	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTCTGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4147262	4149017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4147508_4147816_4147912_4148004_4148138_4148497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012868	chr19	+	637	3	FSM	ENSMUSG00000024856.11	ENSMUST00000174514.2	669	3	32	0	31	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTACTTCCCCATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4147432	4148465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_4147508_4147816_4147918_4148004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012869	chr19	-	143	1	ISM	ENSMUSG00000024847.16	ENSMUST00000117831.8	1378	7	11255	15	6922	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGCAGAACTAATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	4164603	4164460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4164500_4164600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012870	chr19	-	839	4	ISM	ENSMUSG00000024847.16	ENST00000683237.1	1204	6	5352	-2	5352	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGCAGAACTAATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	4166173	4164460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4164797_4165088_4165223_4165319_4165497_4165981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012871	chr19	-	781	4	ISM	ENSMUSG00000024847.16	ENST00000684006.1	1200	6	5406	-2	5406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGCAGAACTAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	4166119	4164461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4164786_4165080_4165223_4165319_4165497_4165981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012872	chr19	-	1043	5	FSM	ENSMUSG00000024847.16	ENST00000528641.7	1048	5	6	-1	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	NA	NA	NA	NA	NA	NA	NA	NA	4171546	4164463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4168086_4168267_4171335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012873	chr19	-	1260	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	NA	NA	NA	NA	NA	NA	NA	NA	4171574	4164463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012874	chr19	-	953	5	NNC	ENSMUSG00000024847.16	novel	1048	5	NA	NA	56	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTCTCTGGCTTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	4171469	4164470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_4164797_4165080_4165217_4165319_4165497_4168086_4168267_4171335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012875	chr19	-	239	2	ISM	ENSMUSG00000024847.16	ENST00000684657.1	1033	5	70	1590	70	-1587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCATGCGGACCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	4171455	4166051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4166171_4171335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012876	chr19	+	1334	5	FSM	ENSMUSG00000024845.20	ENSMUST00000151401.11	800	5	-3	-531	-3	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTCTGAAACTTAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	4175971	4182257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4181227_4181282_4181360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012877	chr19	+	722	4	FSM	ENSMUSG00000024845.20	ENSMUST00000137579.6	741	4	19	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTTGCACTTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4175978	4181731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_4176200_4177055_4177132_4181227_4181282_4181360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012878	chr19	+	934	4	ISM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	1586	236	1557	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGGTCATGTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	4177545	4182070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4177639_4177758_4177836_4181227_4181282_4181360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012879	chr19	+	955	1	Genic_Genomic	ENSMUSG00000024845.20	novel	NA	NA	NA	NA	5370	7	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTCACAGCAGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	4181358	4182313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_4181400_4182300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012880	chr19	+	327	2	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	1	4484	1	-4484	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCGGGTCAGGGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	4198618	4199550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4198736_4199340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012881	chr19	+	461	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	722	3812	722	-3812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCATCCCATACCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	4199339	4200222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4199544_4199861_4199985_4200088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012882	chr19	-	211	2	Antisense	novelGene_ENSMUSG00000024835.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCATTCTTGACCGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	4199948	4199412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_4199535_4199859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012883	chr19	-	201	2	Antisense	novelGene_ENSMUSG00000024835.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCATGAAGAGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4200167	4199859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_4199977_4200083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012884	chr19	+	390	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	1290	3413	1290	-3413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATCCCCAAAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	4199907	4200621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4199985_4200088_4200219_4200438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012885	chr19	+	307	2	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	1471	-3413	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATCCCCAAAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	4200088	4200621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4200213_4200438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012886	chr19	+	339	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	1565	3208	1565	-3208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGATGTAGCAAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	4200182	4200826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4200219_4200438_4200621_4200705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012887	chr19	+	331	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	1898	2535	1898	-2535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTGGGTGGGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	4200515	4201499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4200621_4200705_4200826_4201393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012888	chr19	+	347	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	2115	2307	2115	-2307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGTCCTCTGGGGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	4200732	4201727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4200826_4201393_4201499_4201578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012889	chr19	+	263	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	2822	1456	2822	-1456	internal_fragment	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTGCTGGTAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	4201439	4202578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4201499_4201578_4201725_4202520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012890	chr19	+	424	3	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	2957	593	2957	-593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGCAGTTACTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	4201574	4203441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4201725_4202520_4202579_4203225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012891	chr19	+	464	2	ISM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	4645	202	4645	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTTGCACCTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	4203262	4203832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4203490_4203595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012892	chr19	+	271	2	NNC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	4738	-300	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCCGACACTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	4203355	4203734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4203488_4203595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012893	chr19	+	280	1	Genic_Genomic	ENSMUSG00000024835.16	novel	NA	NA	NA	NA	5139	2	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCTACTGTTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4203756	4204036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_4203800_4204000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012894	chr19	-	375	1	Genic_Genomic	ENSMUSG00000024830.18	novel	NA	NA	NA	NA	8921	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCTGCTTTTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	4204363	4203988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_4204000_4204400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012895	chr19	-	427	2	ISM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	5774	2881	5705	114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCATCCCATTAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	4207579	4206870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4207199_4207480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012896	chr19	-	850	1	ISM	ENSMUSG00000075289.6	ENSMUST00000167055.2	3968	10	10306	0	10306	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCGGAGTCCAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	4215172	4214322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4214300_4215200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012897	chr19	-	734	4	ISM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	1767	-2	1767	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTATCCTCTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4239048	4234665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4235073_4235350_4235506_4238244_4238311_4238942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012898	chr19	-	411	1	NIC	ENSMUSG00000117905.2	novel	3709	16	NA	NA	5970	-15925	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTATCCTCTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4235076	4234665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_4234700_4235100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012899	chr19	-	460	4	ISM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	8	4544	8	-4544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGAGGCCAGGGATACCC	NA	NA	NA	NA	NA	NA	NA	NA	4240807	4239211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4239319_4239404_4239513_4239862_4239963_4240662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012900	chr19	+	908	5	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	0	721	0	-702	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGGGCGGGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	4242063	4244698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012901	chr19	+	661	4	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	12	-1529	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGTGGTTGTGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	4242075	4243871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4242271_4242743_4242873_4243020_4243252_4243765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012902	chr19	+	486	3	NNC	ENSMUSG00000040385.8	novel	1203	6	NA	NA	-62	-2144	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGAATGTTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4242147	4243256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4242271_4242748_4242876_4243020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012903	chr19	+	577	3	ISM	ENSMUSG00000040385.8	ENST00000527663.6	1203	6	826	493	826	-493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTGGGGAAGAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	4243035	4244907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4243252_4244465_4244690_4244770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012904	chr19	+	505	4	NNC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	889	-600	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGACAGTTGGTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	4243098	4244800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4243252_4243765_4243871_4244465_4244690_4244777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012905	chr19	+	617	4	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	1035	514	889	-495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGTGGGGAAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	4243098	4244905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4243252_4243765_4243871_4244465_4244690_4244770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012906	chr19	+	908	4	ISM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	1702	-5	1556	5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTCTCTCTTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	4243765	4245424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4243871_4244465_4244690_4244770_4244906_4244980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012907	chr19	+	562	2	ISM	ENSMUSG00000040385.8	ENST00000527663.6	1203	6	2551	3	2551	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTCAAAGCTGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	4244760	4245397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4244906_4244980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012908	chr19	+	491	2	NNC	ENSMUSG00000040385.8	novel	1203	6	NA	NA	2607	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAATAAAGGTCAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4244816	4245391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4244906_4244989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012909	chr19	+	461	1	Genic_Genomic	ENSMUSG00000040385.8	novel	NA	NA	NA	NA	2750	1	mono-exon	FALSE	NA	NA	NA	NA	NA	584	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCCTCTGTCTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4244959	4245420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_4245000_4245400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012910	chr19	+	1066	2	ISM	ENSMUSG00000040663.10	ENSMUST00000046506.7	1847	3	5937	521	5937	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACCCCAATAACTACATA	NA	NA	NA	NA	NA	NA	NA	NA	4270228	4273023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4270399_4272127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012911	chr19	+	991	1	Genic_Genomic	ENSMUSG00000040663.10	novel	NA	NA	NA	NA	8266	4	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACTCTTTGCCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	4272557	4273548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_4272600_4273500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012912	chr19	+	245	2	ISM	ENSMUSG00000024854.5	ENSMUST00000237518.2	631	3	44	537	44	-537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGAGCACCCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4282083	4282602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4282243_4282516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012913	chr19	+	644	3	FSM	ENSMUSG00000024854.5	ENSMUST00000235306.2	645	3	6	-5	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTACATCTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	4282497	4283690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_4282607_4282801_4282914_4283267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012914	chr19	+	430	1	NIC	ENSMUSG00000024854.5	novel	913	4	NA	NA	767	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCTTACATCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	4283258	4283688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_4283300_4283700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012915	chr19	-	1346	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATTCAAAGAGCTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	4489461	4475485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012916	chr19	-	833	3	ISM	ENSMUSG00000041845.12	ENSMUST00000235680.2	1151	5	7285	0	7239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4482143	4475694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4476285_4476607_4476790_4482082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012917	chr19	-	153	1	NIC	ENSMUSG00000041845.12	novel	1344	5	NA	NA	13095	3	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTTGGCCACCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	4476287	4476134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_4476100_4476300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012918	chr19	-	268	2	ISM	ENSMUSG00000041845.12	ENST00000532559.1	417	3	3	516	3	-516	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTAGGAAGCTAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	4489379	4476653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4476790_4489247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012919	chr19	+	810	1	NIC	ENSMUSG00000087132.9	novel	1563	3	NA	NA	8198	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTATTGTAAAATATGT	NA	NA	NA	NA	NA	NA	NA	NA	4497548	4498358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_4497500_4498400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012920	chr19	+	470	3	ISM	ENSMUSG00000024892.18	ENST00000628663.1	1473	10	2741	1764	2741	-1764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGTCGCGCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	4654488	4660075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4654612_4657559_4657723_4659891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012921	chr19	-	797	2	ISM	ENSMUSG00000045045.8	ENST00000393952.3	1533	3	1184	0	1184	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTTTTTCGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4663976	4661811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4662033_4663400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012922	chr19	-	741	2	ISM	ENSMUSG00000045045.8	ENST00000393952.3	1533	3	7	2153	7	-2145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTCAGCCAGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	4665153	4663964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4664543_4664990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012923	chr19	-	450	1	Genic_Genomic	ENSMUSG00000024889.6	novel	NA	NA	NA	NA	2278	1	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGAACCTTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	4673067	4672617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_4672600_4673100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012924	chr19	-	633	3	ISM	ENSMUSG00000024889.6	ENSMUST00000237059.2	1227	6	1188	258	1135	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGGAGCAGATATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	4674210	4672878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4673271_4673853_4673926_4674041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012925	chr19	-	409	4	ISM	ENSMUSG00000024889.6	ENSMUST00000224675.3	862	7	218	851	216	-851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGGAGAGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	4675129	4673852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4673926_4674041_4674210_4674712_4674792_4675040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012926	chr19	-	421	4	ISM	ENSMUSG00000024889.6	ENST00000524506.5	1362	7	49	2094	49	-1711	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTTCAAGACTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	4675615	4674712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4674792_4675040_4675125_4675220_4675324_4675460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012927	chr19	-	640	5	ISM	ENSMUSG00000071691.12	ENST00000527634.5	915	6	2580	0	2580	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCAGCGAGAGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	4699725	4675990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4676270_4687241_4687345_4692140_4692252_4695627_4695750_4699700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012928	chr19	-	635	5	ISM	ENSMUSG00000071691.12	ENST00000527634.5	915	6	1	11251	1	-11251	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATGATAATACTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	4702304	4687241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4687345_4692140_4692252_4695627_4695750_4699700_4699848_4702152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012929	chr19	+	638	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	77	26985	77	-26985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACGGAAACCACCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4771188	4774771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4771561_4774107_4774260_4774657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012930	chr19	+	622	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	10836	17921	10836	-17921	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAACTGGGGGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	4781947	4783835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4782113_4782415_4782719_4783681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012931	chr19	+	1180	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	11371	16900	11371	-16900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGTAGAGGAGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	4782482	4784856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4782719_4783681_4783836_4784066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012932	chr19	+	891	2	NNC	ENSMUSG00000067889.8	novel	7459	36	NA	NA	12674	-16842	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGAGGTGGTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	4783785	4784914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4783836_4784073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012933	chr19	+	1743	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	12973	13166	12973	-13166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGGTAAGAGTCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	4784084	4788590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4784938_4787369_4787508_4787838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012934	chr19	+	966	2	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	16725	12415	16725	-12415	internal_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAATGGCGGATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	4787836	4789341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4788596_4789134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012935	chr19	+	477	4	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	18083	9300	18083	-9300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCCAAGCCAAGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	4789194	4792456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4789338_4789618_4789710_4789880_4790028_4792360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012936	chr19	+	621	4	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	18505	7564	18505	-7564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGGAGAAGTTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	4789616	4794192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4789710_4789880_4790028_4792360_4792625_4794075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012937	chr19	+	628	4	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	18816	7224	18816	-7224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGGCAAGGACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	4789927	4794532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4790028_4792360_4792625_4794075_4794301_4794493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012938	chr19	+	676	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	24412	4785	24412	-4785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCCATATGAACTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4795523	4796971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4795617_4795807_4796013_4796593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012939	chr19	+	828	3	ISM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	24694	3771	24694	-3771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCCATAGTGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	4795805	4797985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4796013_4796593_4796969_4797739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012940	chr19	+	412	1	ISM	ENSMUSG00000067889.8	ENST00000533211.6	8618	37	40987	0	31133	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTAAATTTCTTGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	4802244	4802656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4802200_4802700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012941	chr19	+	712	2	FSM	ENSMUSG00000033760.18	ENST00000531969.5	710	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTTTCTTAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	4807271	4815657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_4807698_4815371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012942	chr19	+	1099	2	ISM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	701	227	0	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGGGGAGGATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	4807271	4812677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4807698_4812004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012943	chr19	+	661	2	NNC	ENSMUSG00000033760.18	novel	710	2	NA	NA	47	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTTTCTTAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	4807318	4815657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_4807698_4815375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012944	chr19	+	1278	2	ISM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	5396	0	4723	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTAACTGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4811994	4815968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4812676_4815371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012945	chr19	+	727	1	NIC	ENSMUSG00000033760.18	novel	1783	4	NA	NA	4908	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTTGTAAAAAGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	4812179	4812906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_4812200_4812900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012946	chr19	-	1118	1	ISM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	8491	0	8441	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTCTTGGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	4835438	4834320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4834300_4835400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012947	chr19	-	962	3	FSM	ENSMUSG00000094936.9	ENSMUST00000178615.8	1018	3	56	0	56	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4843823	4835180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_4835596_4842425_4842849_4843699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012948	chr19	-	1164	3	ISM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	1201	41	1192	-41	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGCATGCCTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	4842687	4835375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4835596_4837388_4838071_4842425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012949	chr19	-	3151	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	15	-1	15	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGATGGTTCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4861647	4850595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_4851834_4852578_4854044_4861199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012950	chr19	-	716	2	FSM	ENSMUSG00000006456.11	ENST00000443702.1	715	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGGCAAGCCCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4861609	4853789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_4854096_4861199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012951	chr19	-	271	1	ISM	ENSMUSG00000034108.7	ENSMUST00000236451.2	984	8	13634	0	13634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4875664	4875393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4875400_4875700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012952	chr19	+	617	4	ISM	ENSMUSG00000083282.4	ENST00000524994.6	1618	13	30	4004	30	-4004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCCCCAGCCTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4905311	4906615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012953	chr19	+	449	4	ISM	ENSMUSG00000083282.4	ENST00000524994.6	1618	13	2928	1069	2928	-1069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGGGTCCCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	4908209	4909550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4908361_4908443_4908541_4908619_4908701_4909430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012954	chr19	+	447	3	ISM	ENSMUSG00000083282.4	ENST00000310325.10	1714	13	4501	0	4501	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGTGCAGGAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4909782	4910712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4909877_4910277_4910337_4910418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012955	chr19	-	429	2	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	16184	0	16184	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4911753	4911243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4911532_4911612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012956	chr19	-	484	3	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	13751	1938	13751	-1938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTCTACAGCATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	4914186	4913181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4913343_4913437_4913573_4913998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012957	chr19	-	501	4	ISM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	8488	6360	8488	-6360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGGCTTCCCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	4919449	4917603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4917717_4917840_4918072_4918745_4918839_4919385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012958	chr19	+	295	2	ISM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	127	5213	127	-5213	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCCTACGTCGTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	4928826	4930212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_4929058_4930148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012959	chr19	-	572	1	Genic_Genomic	ENSMUSG00000063904.5	novel	NA	NA	NA	NA	20448	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTATGTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4957827	4957255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_4957300_4957800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012960	chr19	-	1160	5	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	13351	0	13311	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4964964	4957256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012961	chr19	-	526	5	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	13161	132	13161	-132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCCCTGTACGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	4965114	4960004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012962	chr19	-	516	5	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	11437	4734	11437	-4734	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACAGGCGAGGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4966838	4964606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012963	chr19	-	466	4	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	11159	5174	11159	-5174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGAGCCCCTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4967116	4965046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4965110_4966306_4966400_4966725_4966839_4966919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012964	chr19	-	594	5	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	10095	6433	10095	-6433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGGGACCACCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	4968180	4966305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012965	chr19	-	521	4	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	1223	11322	1223	-11322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCTTCAGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	4977052	4971194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_4971263_4972349_4972425_4973094_4973233_4976812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012966	chr19	-	1619	5	FSM	ENSMUSG00000024901.16	ENST00000618547.4	1712	5	102	-9	102	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCAGGCAGGCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4991839	4981827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986269_4991795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012967	chr19	-	1069	1	NIC	ENSMUSG00000024901.16	novel	4110	7	NA	NA	9045	9	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCAGGCAGGCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4982896	4981827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_4981800_4982900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012968	chr19	+	766	5	FSM	ENSMUSG00000024902.6	ENSMUST00000236917.2	813	5	47	0	47	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCTCAGCTTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5012422	5014972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013718_5014701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012969	chr19	+	2680	4	ISM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	730	-2	529	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATAGGTATATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5012904	5017029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5013003_5013353_5013448_5013533_5013694_5014701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012970	chr19	+	2327	1	NIC	ENSMUSG00000024902.6	novel	3045	5	NA	NA	2325	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATATATAGGTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	5014700	5017027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_5014700_5017000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012971	chr19	+	206	1	FSM	ENSMUSG00000117723.2	ENSMUST00000235939.2	415	1	210	-1	210	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGACCTTTCCCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5059622	5059828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_5059600_5059800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012972	chr19	+	1942	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	142	-52	61	52	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGACGGCGGTGGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	5088995	5091211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_5090061_5090334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012973	chr19	+	1180	3	ISM	ENSMUSG00000047379.8_ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	-804	3689	-804	-3685	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATGGGAGTGCTGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	5090577	5096256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5091519_5095920_5096067_5096163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012974	chr19	+	812	6	ISM	ENSMUSG00000080268.5	ENST00000425825.6	1175	9	756	-1	756	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGGCTGATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5096675	5099942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099075_5099521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012975	chr19	+	308	2	ISM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	7637	245	3099	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCCCCCACAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	5099018	5099700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5099061_5099434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012976	chr19	+	428	1	ISM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	8136	0	3598	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGATGTGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5099517	5099945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5099500_5099900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012977	chr19	+	779	3	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	1177	2463	724	-2463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACCCAGGTTCGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5101584	5102616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5101659_5101768_5101861_5102003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012978	chr19	+	1024	4	ISM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	1688	1076	1235	-1076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCCGCCTGCCGGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	5102095	5104003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5102745_5103180_5103304_5103626_5103759_5103883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012979	chr19	+	945	5	ISM	ENSMUSG00000024875.6	ENSMUST00000236687.2	1178	8	1098	-376	1098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTATTCATATTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5140053	5142909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012980	chr19	-	192	1	Genic_Genomic	ENSMUSG00000024870.7	novel	NA	NA	NA	NA	7581	1	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGGTGACTGAGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	5149423	5149231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_5149200_5149400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012981	chr19	-	283	2	ISM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	6272	1219	6176	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGACAGCACCCCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5150828	5150451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5150601_5150694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012982	chr19	-	325	3	ISM	ENSMUSG00000024870.7	ENSMUST00000236149.2	757	5	2077	278	2048	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCAGGCCTGCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	5154956	5150693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5150827_5154668_5154765_5154860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012983	chr19	-	302	3	ISM	ENSMUSG00000024870.7	ENSMUST00000236149.2	757	5	-51	4444	16	-4444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATGACCCCTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5157084	5154859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5154957_5155205_5155279_5156952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012984	chr19	-	607	1	ISM	ENSMUSG00000024862.17	ENSMUST00000113728.8	2838	16	9945	0	5833	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	5158380	5157773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5157800_5158400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012985	chr19	-	777	3	ISM	ENSMUSG00000024862.17	ENST00000394065.2	2419	13	4628	328	4628	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTAGACCTCTTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5159585	5158103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5158691_5159328_5159454_5159520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012986	chr19	-	958	4	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	16111	0	16111	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	5329372	5323959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012987	chr19	-	600	1	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	20924	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	5324559	5323959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5324000_5324600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012988	chr19	-	618	5	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	8796	9752	8796	-9752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCTGAAAATCCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	5336687	5333711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012989	chr19	-	613	5	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	7041	12920	7041	-12920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAAGGACAGTGACGAT	NA	NA	NA	NA	NA	NA	NA	NA	5338442	5336879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012990	chr19	-	629	5	ISM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	11	17410	11	-17410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCTGGGTGTCCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	5345472	5341369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012991	chr19	-	1667	1	ISM	ENSMUSG00000024846.7	ENSMUST00000025764.6	3951	3	3203	0	3203	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCATTTGGATTCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	5396399	5394732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5394700_5396400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012992	chr19	-	2189	3	FSM	ENSMUSG00000024846.7	ENSMUST00000025764.6	3951	3	54	1708	54	-1708	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGCATCTAACCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	5399548	5396440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5398078_5398424_5398551_5399122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012993	chr19	-	1264	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTGTGTCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	5417198	5414664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5415187_5415845_5415985_5416595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012994	chr19	-	1263	3	NNC	ENSMUSG00000024844.16	novel	1261	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTCTGTGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5417196	5414665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5415187_5415843_5415985_5416595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012995	chr19	-	1182	3	NNC	ENSMUSG00000024844.16	novel	1261	3	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTCTGTGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5417123	5414665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5415187_5415845_5415979_5416595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012996	chr19	-	1246	3	NNC	ENSMUSG00000024844.16	novel	1261	3	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTTCTGTGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5417175	5414665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5415187_5415845_5415985_5416589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012997	chr19	-	292	1	ISM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	2237	2	1432	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5414959	5414667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5414700_5415000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012998	chr19	+	865	4	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	21	2822	21	-2822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAGAAGGAGGGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	5416789	5418732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000012999	chr19	+	908	3	ISM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	1874	852	1874	-852	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATGTTTTTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	5418642	5420702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5418754_5418922_5418971_5419953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013000	chr19	+	768	1	Genic_Genomic	ENSMUSG00000024841.9	novel	NA	NA	NA	NA	4021	3	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAAGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5420789	5421557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_5420800_5421600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013001	chr19	-	2006	1	ISM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	9175	0	9175	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTGGTTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5429556	5427550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5427600_5429600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013002	chr19	-	985	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	10	-3	10	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTGGTTTCTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	5474997	5472835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013003	chr19	+	1532	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTCCTGATGGTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	5475171	5477345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_5475337_5475978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013004	chr19	+	1372	1	Genic_Genomic	ENSMUSG00000047423.11	novel	NA	NA	NA	NA	791	6	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCTGATGGTTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5475975	5477347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_5476000_5477300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013005	chr19	+	1703	4	FSM	ENSMUSG00000024912.7	ENSMUST00000025850.7	1864	4	46	115	46	-115	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTAGCTTCAGGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	5497620	5505859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_5498084_5500187_5500380_5504440_5504549_5504919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013006	chr19	+	1177	3	NNC	ENSMUSG00000024912.7	novel	1180	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGCCTAGAACACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	5497896	5505720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_5498084_5500187_5500380_5504922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013007	chr19	+	1181	3	FSM	ENSMUSG00000024912.7	ENST00000531493.5	1180	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCCTAGAACACTAACT	NA	NA	NA	NA	NA	NA	NA	NA	5497896	5505721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_5498084_5500187_5500380_5504919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013008	chr19	+	1041	4	FSM	ENSMUSG00000024912.7	ENST00000532401.1	1123	4	87	-5	87	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCCCTCTGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	5497983	5505565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_5498084_5500187_5500380_5504445_5504549_5504919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013009	chr19	-	2548	1	FSM	ENSMUSG00000095098.3	ENSMUST00000179549.3	4715	1	2167	0	1777	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAGAGTCATATATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	5505755	5503207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5503200_5505800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013010	chr19	-	2597	2	FSM	ENSMUSG00000095098.3	ENSMUST00000236881.2	4165	2	88	1480	88	-1480	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCCTTATCCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	5507444	5504692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5507213_5507367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013011	chr19	+	1000	1	Genic_Genomic	ENSMUSG00000024912.7	novel	NA	NA	NA	NA	7079	1	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTTGTCATGTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	5504975	5505975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_5505000_5506000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013012	chr19	+	498	4	ISM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	360	1780	360	-1780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTATGATCCAGAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	5511016	5513297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5511188_5511417_5511545_5512559_5512661_5513198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013013	chr19	-	495	4	ISM	ENSMUSG00000024910.6	ENST00000526034.2	753	6	642	-2	642	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGTGAAATGGCAACGG	NA	NA	NA	NA	NA	NA	NA	NA	5516516	5515554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5515759_5515832_5515898_5516047_5516174_5516416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013014	chr19	-	278	2	ISM	ENSMUSG00000024910.6	ENST00000526034.2	753	6	1250	0	1250	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCGAGTGAAATGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	5515908	5515556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5515759_5515832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013015	chr19	-	205	1	NIC	ENSMUSG00000024910.6	novel	1241	10	NA	NA	1397	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCGAGTGAAATGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	5515761	5515556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5515600_5515800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013016	chr19	-	340	3	ISM	ENSMUSG00000024910.6	ENST00000680670.1	783	7	986	1	986	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCGAGTGAAATGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	5516172	5515557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5515704_5515828_5515898_5516047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013017	chr19	-	449	4	ISM	ENSMUSG00000024910.6	ENST00000526034.2	753	6	389	276	389	-276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGACAGGGAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	5516769	5515832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5515898_5516047_5516174_5516416_5516514_5516608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013018	chr19	-	406	4	ISM	ENSMUSG00000024910.6	ENST00000526034.2	753	6	2	569	2	-569	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGATGCCTAGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	5517156	5516125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5516174_5516416_5516514_5516608_5516764_5517050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013019	chr19	+	552	4	ISM	ENSMUSG00000024909.16	ENST00000307998.11	1467	11	3506	993	3276	-993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACATTAGGGTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	5528227	5530757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5528349_5530057_5530178_5530261_5530389_5530573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013020	chr19	+	1204	4	ISM	ENSMUSG00000024909.16	ENSMUST00000236518.2	2154	9	5159	143	5159	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCAAACATACAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	5530110	5532402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5530178_5530261_5530389_5530573_5530770_5531588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013021	chr19	+	841	1	ISM	ENSMUSG00000024909.16	ENSMUST00000166303.9	2634	11	7723	0	6753	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTAGCCCAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	5531704	5532545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5531700_5532500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013022	chr19	-	704	4	ISM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	19	3662	19	-3662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTGGTGAGCAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	5538411	5536521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5536617_5537052_5537136_5537789_5537920_5538015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013023	chr19	+	2443	5	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	-5	25612	intron_retention	FALSE	canonical	NA	NA	NA	NA	1615	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACCACCACTACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	5540477	5570841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408_5545263_5570790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013024	chr19	+	2363	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	0	17	intron_retention	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5540482	5545246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_5540631_5542524_5542833_5543182_5543260_5543416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013025	chr19	+	2360	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	1	17	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5540483	5545246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_5540631_5542524_5542833_5543192_5543260_5543408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013026	chr19	+	2354	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	3	17	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5540485	5545246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_5540631_5542524_5542819_5543182_5543260_5543408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013027	chr19	+	2348	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	8	17	intron_retention	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGGGCTTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5540490	5545246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_5540616_5542524_5542833_5543182_5543260_5543408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013028	chr19	+	434	2	ISM	ENSMUSG00000056201.9	ENST00000531407.5	925	4	5	985	5	-777	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGCTCCGTATTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5540948	5542830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5541077_5542524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013029	chr19	+	405	1	ISM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	2929	1413	2468	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACGACACCCCTACTCCG	NA	NA	NA	NA	NA	NA	NA	NA	5543411	5543816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5543400_5543800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013030	chr19	+	430	3	ISM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	65	885	65	-885	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCGCAGCAGCGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	5651965	5652582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5652109_5652220_5652403_5652477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013031	chr19	+	527	2	ISM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	577	209	577	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGCCTAGACCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	5652477	5653258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5652598_5652851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013032	chr19	+	426	1	ISM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	1141	0	1141	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTTTGGGAGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5653041	5653467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5653000_5653500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013033	chr19	-	376	1	NIC	ENSMUSG00000056917.14	novel	3583	16	NA	NA	10072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5701591	5701215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5701200_5701600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013034	chr19	-	2498	4	ISM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	116	-2	18	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTGCCTGGTTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	5781625	5778113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013035	chr19	-	1159	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5779680	5778114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5778858_5779264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013036	chr19	-	1170	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5779642	5778114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5778907_5779264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013037	chr19	-	793	1	NIC	ENSMUSG00000024939.7	novel	1189	2	NA	NA	754	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	5778907	5778114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5778100_5778900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013038	chr19	-	362	1	ISM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	2031	1233	1933	1	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGCTAACTCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	5779710	5779348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5779300_5779700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013039	chr19	-	589	3	FSM	ENSMUSG00000118125.2	ENST00000527920.5	688	3	0	99	0	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGAGGGAGCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	5781643	5779448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5779767_5781254_5781354_5781471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013040	chr19	-	533	3	NNC	ENSMUSG00000118125.2	novel	688	3	NA	NA	22	-131	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCAGCGGCCTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	5781621	5779480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5779767_5781256_5781354_5781471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013041	chr19	-	490	1	NIC	ENSMUSG00000118125.2	novel	2532	5	NA	NA	900	-904	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCATGGTCTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	5780743	5780253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5780300_5780700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013042	chr19	-	646	3	NNC	ENSMUSG00000079478.10	novel	705	4	NA	NA	-4	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCCGCGTGGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	5781625	5780342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5780741_5781268_5781354_5781462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013043	chr19	-	556	3	FSM	ENSMUSG00000079478.10	ENST00000526877.1	704	3	2	146	2	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGACCTCTATCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	5781619	5780401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5780741_5781268_5781354_5781487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013044	chr19	+	440	2	ISM	ENSMUSG00000024940.12	ENSMUST00000081496.6	5190	28	1432	12880	1432	-12440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACGCCATTTACGCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	5792363	5795680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5792591_5795467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013045	chr19	+	506	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	14	6216	14	-6216	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGCGGATCTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	5800980	5801904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5801103_5801199_5801332_5801426_5801556_5801781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013046	chr19	+	423	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	317	5951	317	-5951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTCCTGCATGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	5801283	5802169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5801332_5801426_5801556_5801781_5801905_5802046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013047	chr19	+	500	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	808	4040	808	-4040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTTGGCCAGGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	5801774	5804080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5801905_5802046_5802170_5803660_5803784_5803956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013048	chr19	+	430	4	ISM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	1145	2418	1145	-2418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACCCTCTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	5802111	5805702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5802170_5803660_5803784_5803956_5804077_5805573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013049	chr19	+	418	3	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	297	1993	297	-1993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGGATATACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	5803955	5806127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5804077_5805573_5805703_5805959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013050	chr19	+	386	3	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	1913	1759	1913	-1759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGACCTGCCGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5805571	5806361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5805703_5805959_5806128_5806274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013051	chr19	+	515	4	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	2299	1167	2299	-1167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGTGAGGCCCGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	5805957	5806953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5806128_5806274_5806359_5806611_5806741_5806821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013052	chr19	+	495	4	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	2613	917	2613	-917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGCGACATTCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5806271	5807203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5806359_5806611_5806741_5806821_5806960_5807062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013053	chr19	+	443	3	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	3162	619	3162	-619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTACCCCTGAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	5806820	5807501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5806960_5807062_5807204_5807338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013054	chr19	+	386	3	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	3402	465	3402	-465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGCCAAGGGGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	5807060	5807655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5807204_5807338_5807501_5807574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013055	chr19	+	528	4	ISM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	3679	0	3679	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCAGCCATAGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	5807337	5808120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5807501_5807574_5807656_5807738_5807871_5807968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013056	chr19	+	427	1	ISM	ENSMUSG00000024940.12	ENSMUST00000081496.6	5190	28	17202	0	4475	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTTGGAAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5808133	5808560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5808100_5808600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013057	chr19	-	480	2	ISM	ENSMUSG00000024941.10	ENST00000525364.5	2572	16	12251	0	12251	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5809177	5808454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5808725_5808967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013058	chr19	-	273	1	NIC	ENSMUSG00000024941.10	novel	2731	17	NA	NA	12701	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5808727	5808454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5808500_5808700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013059	chr19	-	428	2	ISM	ENSMUSG00000024941.10	ENST00000525364.5	2572	16	851	11304	851	-11304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGGAAGGTAAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5820577	5819758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5819840_5820230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013060	chr19	-	312	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	6672	-1	952	1	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTCTTTGTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	5846028	5845716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5845700_5846000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013061	chr19	-	625	2	FSM	ENSMUSG00000092341.4	ENST00000618132.1	622	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTATTCAAGGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5847950	5847227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5847749_5847846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013062	chr19	+	570	2	Antisense	novelGene_ENSMUSG00000092341.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGAAATGAGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	5847228	5847904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_+_5847744_5847849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013063	chr19	-	520	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	4952	1511	200	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTATTCAAGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	5847748	5847228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5847200_5847700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013064	chr19	+	583	2	Antisense	novelGene_ENSMUSG00000092341.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGCTCTGCAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5847228	5847913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_+_5847751_5847852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013065	chr19	+	597	2	Antisense	novelGene_ENSMUSG00000092341.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAACTCTTTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	5847228	5847924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_+_5847751_5847849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013066	chr19	-	494	2	FSM	ENSMUSG00000092341.4	ENSMUST00000173499.2	485	2	0	-9	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGGAAGGTGAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	5852699	5851934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5851995_5852265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013067	chr19	-	470	2	NNC	ENSMUSG00000092341.4	novel	485	2	NA	NA	18	8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGGAAGGTGAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5852681	5851935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5851990_5852265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013068	chr19	-	480	2	NNC	ENSMUSG00000092341.4	novel	485	2	NA	NA	6	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATACAGGAAGGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	5852693	5851939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5851990_5852263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013069	chr19	-	423	2	NNC	ENSMUSG00000092341.4	novel	485	2	NA	NA	55	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACATACAGGAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5852644	5851942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5851985_5852263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013070	chr19	-	398	2	NNC	ENSMUSG00000092341.4	novel	485	2	NA	NA	90	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACATACAGGAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5852609	5851942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5851995_5852263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013071	chr19	+	407	2	Genic_Genomic	ENSMUSG00000102349.2	novel	453	1	NA	NA	294	26832	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCACATATTTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5852262	5879253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_5852659_5879242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013072	chr19	-	898	2	FSM	ENSMUSG00000092274.4	ENST00000499732.3	890	2	-4	-4	-4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCGTGCTGCACTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5895069	5894005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5894783_5894948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013073	chr19	-	775	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-318	-305	-318	305	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGCGTGCTGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	5894783	5894008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_5894000_5894800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013074	chr19	-	884	2	NNC	ENSMUSG00000092274.4	novel	890	2	NA	NA	3	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGCGTGCTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	5895062	5894009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5894780_5894948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013075	chr19	-	832	2	NNC	ENSMUSG00000092274.4	novel	3004	2	NA	NA	23	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGCGTGCTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	5895014	5894009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5894780_5894952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013076	chr19	-	864	2	NIC	ENSMUSG00000092274.4	novel	890	2	NA	NA	-6	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGCGTGCTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	5895043	5894009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5894783_5894952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013077	chr19	-	850	2	NNC	ENSMUSG00000092274.4	novel	3004	2	NA	NA	9	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGCGTGCTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	5895028	5894009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_5894787_5894955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013078	chr19	-	844	2	NIC	ENSMUSG00000092274.4	novel	862	2	NA	NA	22	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGCGTGCTGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	5895015	5894009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_5894787_5894948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013079	chr19	-	1489	1	ISM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	24084	0	23920	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGTTTAAATTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	5901218	5899729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5899700_5901200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013080	chr19	-	1813	3	ISM	ENSMUSG00000024816.13	ENST00000355991.9	1294	10	12714	-1299	12714	1299	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCCTATCACTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	5912424	5901308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5902771_5906612_5906818_5912278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013081	chr19	+	919	5	FSM	ENSMUSG00000024818.16	ENST00000534028.5	989	5	71	-1	71	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGCGATACTGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	5928562	5935023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_5928720_5929876_5929921_5930467_5930654_5934372_5934632_5934750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013082	chr19	+	547	4	ISM	ENSMUSG00000024818.16	ENST00000526432.5	684	5	1193	101	1193	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTCAAGGGCATGACA	NA	NA	NA	NA	NA	NA	NA	NA	5929875	5934921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_5929921_5930112_5930185_5934372_5934632_5934750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013083	chr19	+	439	2	NNC	ENSMUSG00000024818.16	novel	989	5	NA	NA	5780	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGGCGATACTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	5934462	5935022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_5934636_5934756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013084	chr19	+	428	2	NNC	ENSMUSG00000024818.16	novel	989	5	NA	NA	5787	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGGCGATACTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	5934469	5935022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_5934632_5934756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013085	chr19	+	279	1	NIC	ENSMUSG00000024818.16	novel	2480	6	NA	NA	6061	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGGCGATACTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	5934743	5935022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_5934700_5935000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013086	chr19	-	187	1	Genic_Genomic	ENSMUSG00000024826.16	novel	NA	NA	NA	NA	16093	3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGTGCTCTGTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	5946727	5946540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_5946500_5946700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013087	chr19	-	1055	1	ISM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	14430	871	14351	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5948469	5947414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5947400_5948500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013088	chr19	-	224	2	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	11494	1103	11494	-1103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCCTCTTTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5951326	5948517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5948660_5951244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013089	chr19	-	187	2	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	10301	4772	10301	-4772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAGTGCATCGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	5952519	5952186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5952245_5952390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013090	chr19	-	267	2	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	10024	4976	10024	-4976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTCCATCCTCAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5952796	5952390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5952520_5952658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013091	chr19	-	339	3	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	7237	6853	7237	-6853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCACCTGAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	5955583	5954267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5954347_5954481_5954575_5955416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013092	chr19	-	254	2	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	6158	8023	6158	-8023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACAGTCGAGCACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	5956662	5955437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5955581_5956551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013093	chr19	-	255	2	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	5631	9151	5631	-9151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGATTAAACCAGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5957189	5956565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5956660_5957028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013094	chr19	-	286	2	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	-72	9613	7	-9613	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTCAGGCTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	5962892	5957027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5957190_5962768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013095	chr19	-	1987	1	ISM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	7194	0	7194	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTTTATGGTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	5967650	5965663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5965700_5967600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013096	chr19	-	199	1	ISM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	23462	0	23462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCTTTTTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	5990768	5990569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5990600_5990800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013097	chr19	-	568	2	ISM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	22114	-29	22114	29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGACTATGTTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	5992116	5991105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_5991581_5992023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013098	chr19	-	273	2	ISM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	231	19982	231	-19982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTACTGTGAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6013999	6011116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6011244_6013853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013099	chr19	-	594	1	Genic_Genomic	ENSMUSG00000007338.11	novel	NA	NA	NA	NA	3544	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAACTCCTGTAACACA	NA	NA	NA	NA	NA	NA	NA	NA	6104244	6103650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_6103600_6104200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013100	chr19	-	807	3	ISM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	705	831	678	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTGAGGAGAGGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	6107110	6104482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6105013_6105105_6105231_6106958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013101	chr19	+	448	4	ISM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	-6	320	-6	-287	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGATTGGTGTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	6107867	6109229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013102	chr19	+	607	5	FSM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	-97	-2	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATGTTTTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	6107875	6109548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173_6109230_6109378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013103	chr19	+	304	2	ISM	ENSMUSG00000038274.14	ENSMUST00000237840.2	472	4	-54	942	-54	-912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTTTTTTTCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	6108198	6108604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6108356_6108457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013104	chr19	+	302	3	NNC	ENSMUSG00000038274.14	novel	736	4	NA	NA	228	-18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAGTCCTATTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	6108480	6109498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_6108607_6109173_6109230_6109378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013105	chr19	+	416	1	FSM	ENSMUSG00000075227.7	ENSMUST00000162726.5	1281	1	866	-1	866	1	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCAGTGCCTTTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	6112087	6112503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_6112100_6112500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013106	chr19	-	272	1	Genic_Genomic	ENSMUSG00000024792.10	novel	NA	NA	NA	NA	3911	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCAGCTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	6131062	6130790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_6130800_6131100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013107	chr19	-	385	2	ISM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	2978	187	2978	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCCCTCAGTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	6131995	6130978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6131245_6131876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013108	chr19	-	323	3	ISM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	2471	1101	2471	-1101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCAGCTGCTCAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	6132502	6131892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6131995_6132210_6132358_6132428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013109	chr19	-	406	3	ISM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	2164	1428	2164	-1428	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACACGGTGAGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	6132809	6132219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6132358_6132428_6132502_6132614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013110	chr19	-	381	3	ISM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	881	1637	881	-1637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGTGGCCTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	6134092	6132428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6132502_6132614_6132809_6133978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013111	chr19	-	289	3	ISM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	549	1883	549	-1883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACTGAGAGAAAAGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	6134424	6132674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6132809_6133978_6134091_6134381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013112	chr19	-	268	3	ISM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	34	3187	34	-3187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCTGGGAAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	6134939	6133978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6134091_6134381_6134492_6134893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013113	chr19	+	458	3	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	5	9088	5	-9088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGGGACCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	6155865	6156497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6156028_6156115_6156289_6156374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013114	chr19	+	707	4	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	259	6805	259	-6805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGTGCGTCCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	6156119	6158780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6156289_6156374_6156497_6156852_6156976_6158487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013115	chr19	+	481	3	ISM	ENSMUSG00000054999.3	ENST00000356632.7	2100	17	1004	6051	1004	-6051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTGTTTGTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	6156864	6159534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6156976_6158487_6158772_6159448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013116	chr19	+	484	3	ISM	ENSMUSG00000054999.3	ENST00000356632.7	2100	17	2634	5801	2634	-5801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCATGCTCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6158494	6159784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6158772_6159448_6159535_6159663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013117	chr19	+	298	2	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	2724	6622	2724	-6622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATCTCTCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	6158584	6158963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6158772_6158852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013118	chr19	+	271	2	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	2991	5972	2991	-5972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTCTGCTGTCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	6158851	6159613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6158958_6159448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013119	chr19	+	303	2	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	3709	3314	-2610	-3314	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGACTCCACGGAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6159569	6162271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6159784_6162182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013120	chr19	+	203	3	ISM	ENSMUSG00000054999.3	ENST00000526799.5	878	8	42	2778	42	-2769	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCCCAGAAACCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	6162221	6162816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6162269_6162358_6162423_6162724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013121	chr19	+	499	5	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	6653	777	334	-777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGCACACCCCAACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	6162513	6164808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6162573_6162724_6162817_6162905_6162997_6164471_6164554_6164633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013122	chr19	+	254	3	ISM	ENSMUSG00000054999.3	ENST00000526799.5	878	8	545	881	545	-872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCAGTGACTATAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	6162724	6164713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6162817_6164471_6164554_6164633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013123	chr19	+	530	5	ISM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	7043	417	724	-417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCTATGCCAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	6162903	6165168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6162997_6164471_6164554_6164633_6164808_6164883_6164972_6165075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013124	chr19	+	369	3	ISM	ENSMUSG00000054999.3	ENST00000526799.5	878	8	2703	9	2703	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCTGTCCCTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	6164882	6165585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6164972_6165075_6165169_6165398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013125	chr19	+	199	1	NIC	ENSMUSG00000054999.3	novel	2491	18	NA	NA	3216	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTTGGGCTTTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	6165395	6165594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_6165400_6165600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013126	chr19	-	1448	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	1	-7	1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTTTTAGACTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6168679	6166022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_6166618_6167826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013127	chr19	-	238	1	ISM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	2396	17	2158	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATGATCTCCAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	6166284	6166046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6166000_6166300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013128	chr19	-	317	2	FSM	ENSMUSG00000024790.9	ENST00000398846.6	1234	2	476	441	476	-441	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCACCTTACCCTACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	6167966	6166487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_6166618_6167779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013129	chr19	-	400	1	ISM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	8506	0	8349	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCATTTGCTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	6169828	6169428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6169400_6169800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013130	chr19	-	599	2	ISM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	7560	216	7403	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCTAGACCAGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6170774	6169644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6169985_6170515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013131	chr19	-	552	3	ISM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	6375	1084	6218	-631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGGCAGTAGGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	6171959	6170512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6170774_6171408_6171553_6171812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013132	chr19	-	350	3	ISM	ENSMUSG00000024787.15	ENSMUST00000154601.8	767	7	5991	1586	5991	-1586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCGAGGTCCCCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6172186	6171467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6171553_6171812_6171961_6172069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013133	chr19	-	389	4	ISM	ENSMUSG00000024787.15	ENSMUST00000154601.8	767	7	3954	1968	3954	-1968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGAAAGGAGGGGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	6174223	6171849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6171961_6172069_6172186_6173859_6173981_6174182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013134	chr19	-	386	4	ISM	ENSMUSG00000024787.15	ENSMUST00000154601.8	767	7	-22	2196	-22	-2196	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCGGGTGAGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6178199	6172077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6172186_6173859_6173981_6174182_6174219_6178078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013135	chr19	-	1285	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAGCCATTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	6191576	6184411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013136	chr19	-	254	1	Genic_Genomic	ENSMUSG00000024777.11	novel	NA	NA	NA	NA	7826	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTTGCTTTATTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	6278047	6277793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_6277800_6278000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013137	chr19	-	232	2	ISM	ENSMUSG00000024777.11	ENST00000164133.7	2710	14	6492	1177	6492	-1177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACCGGGTGGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	6279381	6278971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6279074_6279251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013138	chr19	-	240	2	ISM	ENSMUSG00000024777.11	ENST00000164133.7	2710	14	1020	6160	1020	-6160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGGGTGATGTTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	6284853	6283954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6284004_6284662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013139	chr19	-	393	2	ISM	ENSMUSG00000024777.11	ENST00000164133.7	2710	14	132	7139	132	-7139	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCAACTTACTCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	6285741	6284933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6285127_6285541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013140	chr19	+	976	3	ISM	ENSMUSG00000024773.16	ENST00000421419.3	1508	6	18269	0	18269	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGGAATAAACTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	6310018	6312298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6310174_6311401_6311555_6311630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013141	chr19	+	1193	4	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	0	2536	0	-2536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAGATGCCCAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	6326754	6347590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013142	chr19	+	1298	4	ISM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	4548	1346	4548	-1346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTCAGCTCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	6331302	6348780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6331346_6344243_6344657_6347562_6347728_6348103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013143	chr19	+	765	1	Genic_Genomic	ENSMUSG00000024772.10	novel	NA	NA	NA	NA	22608	1	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCTCCCTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6349362	6350127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_6349400_6350100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013144	chr19	+	1121	1	ISM	ENSMUSG00000024947.18	ENSMUST00000113504.10	2663	10	4792	0	4310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTATGTATGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6389800	6390921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6389800_6390900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013145	chr19	+	284	2	ISM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	103	10771	-9	-10771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTATACCCCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	6413942	6415771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6414149_6415693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013146	chr19	+	1423	4	ISM	ENSMUSG00000024949.18	ENST00000377387.5	2813	13	9992	0	9992	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	6424038	6427233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6424314_6424578_6424639_6424748_6424929_6426325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013147	chr19	+	423	1	ISM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	13091	827	12764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	6426810	6427233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6426800_6427200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013148	chr19	-	530	3	ISM	ENSMUSG00000061742.13	ENST00000473690.5	1340	8	4795	0	4795	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGAGCCGCCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	6587883	6586765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6586971_6587146_6587256_6587667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013149	chr19	-	632	3	ISM	ENSMUSG00000061742.13	ENST00000377567.6	1277	7	2	1938	2	-1938	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGGGCTAGGCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	6592782	6588703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6588830_6591089_6591194_6592380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013150	chr19	-	655	1	FSM	ENSMUSG00000118181.2	ENSMUST00000235920.2	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6807231	6806576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_6806600_6807200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013151	chr19	-	1441	4	ISM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9460	-1	9460	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATCTGTGGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6808544	6806576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013152	chr19	-	1263	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6887475	6884073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013153	chr19	+	530	3	ISM	ENSMUSG00000038812.17	ENSMUST00000088257.14	957	5	43	581	-6	-560	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCCCGCCCCTTCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	6887108	6887836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_6887224_6887321_6887631_6887730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013154	chr19	+	990	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	16	-21	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATTAAAATAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6887130	6888417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013155	chr19	-	2012	6	FSM	ENSMUSG00000024955.16	ENST00000400596.2	1262	6	22	-772	22	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACGGTGGTCGGTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6897745	6888346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891465_6891564_6897430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013156	chr19	-	185	1	ISM	ENSMUSG00000024955.16	ENSMUST00000239322.2	2274	7	9902	777	8461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAAGGGGTGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	6889306	6889121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6889100_6889300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013157	chr19	-	754	4	ISM	ENSMUSG00000024958.14	ENST00000313074.7	1462	7	1505	-1	1424	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCCCTCCTGTCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	6916783	6915440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6915792_6916123_6916243_6916379_6916509_6916628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013158	chr19	-	448	1	ISM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	2672	17	2318	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCCCTCCTGTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	6915889	6915441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6915400_6915900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013159	chr19	-	895	4	ISM	ENSMUSG00000024958.14	ENST00000377702.8	1355	6	1101	37	1083	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGCCTACCACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	6917124	6915478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013160	chr19	-	376	2	NNC	ENSMUSG00000024958.14	novel	1492	9	NA	NA	1963	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGGCATGACCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	6916244	6915529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_6915785_6916123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013161	chr19	-	173	2	ISM	ENSMUSG00000024958.14	ENST00000539851.5	1385	6	1763	365	1746	-277	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTTCTCCCAGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	6916461	6915806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6915898_6916379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013162	chr19	-	626	4	ISM	ENSMUSG00000024958.14	ENST00000313074.7	1462	7	1166	680	1085	-592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGCCTCTACCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6917122	6916121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6916243_6916379_6916509_6916628_6916779_6916896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013163	chr19	-	827	4	ISM	ENSMUSG00000024958.14	ENST00000377702.8	1355	6	-47	938	16	-850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGACCCCCCCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	6918272	6916379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6916509_6916896_6917123_6917719_6917770_6917850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013164	chr19	-	430	3	ISM	ENSMUSG00000024958.14	ENST00000539851.5	1385	6	452	1186	435	-1098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCATTGGTCCTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6917772	6916627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6916779_6916896_6917123_6917719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013165	chr19	-	500	3	ISM	ENSMUSG00000024958.14	ENST00000411458.5	1492	9	334	2191	-120	-2191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTACTGGAGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	6919938	6917720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6917770_6917850_6918223_6919859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013166	chr19	+	1370	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	82	0	82	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTATCCTTCGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6919310	6929267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013167	chr19	+	988	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	6919870	6929261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013168	chr19	+	961	4	NNC	ENSMUSG00000024959.15	novel	990	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	6919892	6929261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_6919993_6920239_6920415_6928007_6928199_6928766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013169	chr19	-	193	1	Genic_Genomic	ENSMUSG00000024960.10	novel	NA	NA	NA	NA	16786	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGCCTGGGTTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	6930340	6930147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_6930100_6930300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013170	chr19	-	221	3	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	14542	1140	14486	-1140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGGAGGTGTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6932640	6932220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6932299_6932391_6932469_6932574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013171	chr19	-	244	3	ISM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	134	12710	78	-12710	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACAAGGACAGGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	6947048	6943790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6943823_6943999_6944078_6946914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013172	chr19	+	999	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTGGCTGGTCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	6952336	6954693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013173	chr19	+	615	3	NNC	ENSMUSG00000056612.8	novel	686	3	NA	NA	117	-193	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGACGGCCGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	6952452	6954425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_6952875_6953911_6954014_6954334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013174	chr19	-	563	5	ISM	ENSMUSG00000056629.17	ENSMUST00000238181.2	1526	6	1107	-8	1107	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTGTATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	6956511	6955106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013175	chr19	-	193	1	NIC	ENSMUSG00000056629.17	novel	642	6	NA	NA	2312	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAAGAGTGAGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	6955306	6955113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_6955100_6955300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013176	chr19	-	451	3	ISM	ENSMUSG00000056629.17	ENST00000652762.2	1664	6	885	868	704	-868	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTTTGTTTTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	6956914	6955989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6956039_6956340_6956510_6956681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013177	chr19	-	365	1	Genic_Genomic	ENSMUSG00000024962.14	novel	NA	NA	NA	NA	4793	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTGTCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	6960204	6959839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_6959800_6960200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013178	chr19	-	140	1	ISM	ENSMUSG00000024963.13	ENSMUST00000179118.2	840	6	4222	0	4222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	6965418	6965278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6965300_6965400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013179	chr19	-	157	2	ISM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	2728	1615	2497	-1615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCGGAGTCAAGGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	6967143	6966893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6966956_6967048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013180	chr19	-	188	2	ISM	ENSMUSG00000024963.13	ENSMUST00000179118.2	840	6	1460	1862	1460	-1862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCGTAACTATGACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	6968180	6967140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6967234_6968085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013181	chr19	-	128	2	ISM	ENSMUSG00000024963.13	ENSMUST00000179118.2	840	6	80	2807	80	-2807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGTGCCCCCAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	6969560	6968085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6968180_6969526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013182	chr19	-	814	5	ISM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	377	81	377	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGTCCCACCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6973028	6970466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013183	chr19	+	602	5	FSM	ENSMUSG00000047656.10	ENST00000546089.5	601	5	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAACAGACACAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	6974061	6976375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013184	chr19	-	656	2	FSM	ENSMUSG00000047787.9	ENST00000537170.1	600	2	-6	-50	-6	50	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAGTCCTAGCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	7143252	7082907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_7083368_7143056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013185	chr19	-	610	2	NNC	ENSMUSG00000047787.9	novel	600	2	NA	NA	9	31	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTGGTAAAGAAAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	7143237	7082926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_7083356_7143056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013186	chr19	-	619	2	NNC	ENSMUSG00000047787.9	novel	600	2	NA	NA	6	31	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTGGTAAAGAAAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	7143240	7082926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_7083362_7143056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013187	chr19	-	1668	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	50	-5	-32	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATGCATCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	7183631	7175561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013188	chr19	-	755	1	ISM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	7352	8	7270	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGCTGTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	7176329	7175574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7175600_7176300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013189	chr19	-	337	1	Genic_Genomic	ENSMUSG00000035885.6	novel	NA	NA	NA	NA	2130	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1584	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGTCCTTCTGCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	7192851	7192514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_7192500_7192900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013190	chr19	-	551	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCATGTCCTTCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	7194982	7192517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_7192850_7194763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013191	chr19	+	326	2	Antisense	novelGene_ENSMUSG00000035885.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGACATGACGGCGCGG	NA	NA	NA	NA	NA	NA	NA	NA	7192616	7194867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_+_7192842_7194766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013192	chr19	-	739	1	ISM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	14772	0	14645	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	7203776	7203037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7203000_7203800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013193	chr19	-	744	2	ISM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	12796	1711	12669	-1671	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCGGGACCAGCCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	7205752	7204748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7205457_7205716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013194	chr19	-	1371	1	ISM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	64856	0	18681	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	7254131	7252760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7252800_7254100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013195	chr19	-	201	1	Genic_Genomic	ENSMUSG00000024758.16	novel	NA	NA	NA	NA	57046	1	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTCTGCAACTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	7403465	7403264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_7403300_7403500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013196	chr19	-	850	1	ISM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	55383	1069	55327	13	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTGGGCTCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	7405184	7404334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7404300_7405200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013197	chr19	-	1263	4	FSM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	32	73	32	-73	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATATGGTTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	7460479	7404420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_7405241_7407115_7407175_7412295_7412504_7460303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013198	chr19	-	236	3	ISM	ENSMUSG00000024758.16	ENSMUST00000235593.2	2403	9	52234	204	52113	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTCAGCTAGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	7408398	7405111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7405241_7407115_7407175_7408350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013199	chr19	-	182	3	ISM	ENSMUSG00000024758.16	ENSMUST00000235593.2	2403	9	51230	2204	51109	-2204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACTTAGGGACCACGTT	NA	NA	NA	NA	NA	NA	NA	NA	7409402	7407111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7407175_7408350_7408398_7409330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013200	chr19	-	256	3	ISM	ENSMUSG00000024758.16	ENSMUST00000235593.2	2403	9	50677	3443	50556	-3443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCATTTATCTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	7409955	7408350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7408398_7409330_7409401_7409816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013201	chr19	-	321	2	ISM	ENSMUSG00000024758.16	ENSMUST00000235593.2	2403	9	48155	4909	48034	-4909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTTGCTGGGCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	7412477	7409816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7409956_7412295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013202	chr19	+	377	1	Genic_Genomic	ENSMUSG00000060675.14	novel	NA	NA	NA	NA	30686	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTGTAGTCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	7565535	7565912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_7565500_7565900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013203	chr19	-	326	2	ISM	ENSMUSG00000024972.17	ENST00000415491.6	906	7	5491	0	5491	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAGGGGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	7576275	7575361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7575537_7576124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013204	chr19	-	177	1	NIC	ENSMUSG00000024972.17	novel	2470	10	NA	NA	6228	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGGAGGGGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	7575538	7575361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_7575400_7575500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013205	chr19	-	385	4	ISM	ENSMUSG00000024972.17	ENST00000425950.2	886	7	1271	779	1271	-779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTCTTCGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	7580495	7576140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7576276_7578012_7578102_7579407_7579447_7580373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013206	chr19	-	336	2	ISM	ENSMUSG00000024972.17	ENST00000415491.6	906	7	217	5012	217	-5012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTCCCTTGGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	7581549	7580373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7580494_7581333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013207	chr19	-	318	2	ISM	ENSMUSG00000024972.17	ENST00000415491.6	906	7	1	5965	1	-5965	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTGTGTGTGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	7581765	7581326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_7581548_7581668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013208	chr19	-	334	2	FSM	ENSMUSG00000024757.8	ENST00000417740.5	324	2	-3	-7	-3	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTGCCTCTATAACG	NA	NA	NA	NA	NA	NA	NA	NA	7688453	7659283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_7659321_7688156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013209	chr19	-	315	2	NNC	ENSMUSG00000024757.8	novel	324	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAATTTCTTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	7688450	7659290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_7659321_7688165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013210	chr19	-	325	2	NNC	ENSMUSG00000024757.8	novel	324	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAATTTCTTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	7688452	7659290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_7659329_7688165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013211	chr19	-	1215	1	NIC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	4889	0	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGATGAGTGATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	8685460	8684245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_8684200_8685500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013212	chr19	-	1491	4	ISM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	3572	-574	3572	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCCCAGTACCCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	8686777	8684376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013213	chr19	-	465	4	ISM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	3376	608	3376	-529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGCAGTTGAGGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	8686973	8685558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_8685642_8686368_8686510_8686593_8686775_8686913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013214	chr19	-	487	5	ISM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	1115	1418	1115	-1339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCACTTGTCTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	8689234	8686368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013215	chr19	-	766	4	ISM	ENSMUSG00000010095.14	ENST00000338663.12	1668	9	8	2049	8	-2049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCCTTTCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	8691129	8687078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_8687148_8689197_8689293_8690093_8690268_8690701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013216	chr19	+	563	2	FSM	ENSMUSG00000010110.18	ENSMUST00000176570.2	563	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACAACTTGGTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	8726762	8727458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_8727137_8727269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013217	chr19	+	387	3	ISM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	104	8071	61	-2455	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTACTTGGAAGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	8734574	8740200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8734624_8739675_8739860_8740046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013218	chr19	+	423	3	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	5192	7302	5161	-1675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACAGAGTTAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	8739674	8740980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8739860_8740046_8740201_8740896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013219	chr19	+	592	3	ISM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	11883	-4	11852	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTTGTTTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	8746365	8748286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8746548_8747623_8747685_8747937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013220	chr19	+	351	1	NIC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	13422	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTTGTTTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	8747935	8748286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_8747900_8748300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013221	chr19	-	819	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	3	-4	3	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATATTACTTTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	8751828	8749911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013222	chr19	-	416	3	ISM	ENSMUSG00000118346.2	ENST00000533861.5	654	4	882	-2	882	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCTGTACAGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	8750929	8749978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_8750199_8750653_8750789_8750868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013223	chr19	-	2704	1	Genic_Genomic	ENSMUSG00000071660.11	novel	NA	NA	NA	NA	7151	5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTAGAAATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	8789137	8786433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_8786400_8789100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013224	chr19	-	3033	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	647	-2095	277	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTGTCATCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	8796011	8786564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_8789203_8793217_8793401_8795799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013225	chr19	+	2583	2	FSM	ENSMUSG00000071656.8	ENSMUST00000096257.3	2583	2	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATACAGACTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8828149	8831274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_8828477_8829018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013226	chr19	+	145	2	ISM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	200	3565	200	-3557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGCCCTGAAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	8849223	8849463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8849277_8849371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013227	chr19	+	149	2	ISM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	556	2074	556	-2066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGGAGGAGACAAGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	8849579	8850954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8849652_8850877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013228	chr19	+	173	2	ISM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	2133	1407	2133	-1399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTTTCAAGTGACCGTC	NA	NA	NA	NA	NA	NA	NA	NA	8851156	8851621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8851211_8851502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013229	chr19	+	161	2	ISM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	2544	396	2544	-388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGACCCTGTGCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	8851567	8852632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8851620_8852523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013230	chr19	+	153	2	ISM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	3594	89	3594	-81	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCCCACCATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	8852617	8852939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8852717_8852885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013231	chr19	+	141	1	NIC	ENSMUSG00000071655.13	novel	1033	10	NA	NA	3856	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTATATGCCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	8852879	8853020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_8852900_8853000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013232	chr19	-	823	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGAAAGACCATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	8858287	8857375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_8857981_8858069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013233	chr19	+	697	3	ISM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	270	-2	270	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAACATTTGCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8866486	8868247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8866613_8867366_8867465_8867774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013234	chr19	+	480	1	NIC	ENSMUSG00000096740.9	novel	3164	6	NA	NA	6673	-1743	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACATTTGCCAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	8867768	8868248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_8867800_8868200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013235	chr19	+	1307	1	ISM	ENSMUSG00000096740.9	ENSMUST00000187504.7	3164	6	7589	0	7589	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8868684	8869991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8868700_8870000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013236	chr19	+	2605	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	32	637	32	-637	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGCTGGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8870400	8874615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_8870513_8872122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013237	chr19	+	2566	1	Genic_Genomic	ENSMUSG00000071652.9	novel	NA	NA	NA	NA	2320	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTTTCTATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	8872688	8875254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_8872700_8875300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013238	chr19	+	1149	2	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	17291	6	17291	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGGATGTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	8892761	8894030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8892869_8892988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013239	chr19	+	543	1	ISM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	18029	0	18023	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	NA	NA	NA	NA	NA	NA	NA	NA	8893493	8894036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8893500_8894000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013240	chr19	+	1604	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	8897736	8904600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013241	chr19	-	1258	3	FSM	ENSMUSG00000071648.5	ENSMUST00000096242.5	1517	3	259	0	259	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTCTCCCGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	8906461	8904754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_8905252_8905341_8905589_8905947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013242	chr19	+	1080	3	ISM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	9040	-1	9040	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAGCTATTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	8928278	8929668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8928395_8928499_8928649_8928853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013243	chr19	+	982	7	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	2123	770	2123	-388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAAGATGTTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	8946527	8955073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013244	chr19	+	1389	7	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	2392	-2	2392	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTTCTGTCATAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	8946796	8955845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013245	chr19	+	959	4	ISM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	5854	89	334	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTACCAAATTCTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	8950258	8955754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8950473_8954681_8954855_8954948_8955074_8955307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013246	chr19	+	442	3	ISM	ENSMUSG00000071644.11	ENST00000422983.1	720	5	4755	-1	4755	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACAAGTCTTGCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	8954679	8955462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_8954855_8954948_8955061_8955307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013247	chr19	-	1671	1	ISM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	24098	0	24098	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTCCTTGTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	9088902	9087231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_9087200_9088900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013248	chr19	-	620	2	FSM	ENSMUSG00000071640.4	ENSMUST00000090527.5	758	2	4	134	4	-134	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGCTGGTTGAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	9536543	9535289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_9535842_9536475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013249	chr19	-	1811	1	ISM	ENSMUSG00000118383.2	ENSMUST00000236905.2	2697	2	6188	0	6188	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTGTCCTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	9808073	9806262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_9806300_9808100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013250	chr19	-	1859	2	FSM	ENSMUSG00000118383.2	ENSMUST00000236905.2	2697	2	88	750	88	-750	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGCTGCCATAGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	9814173	9807012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_9808776_9814077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013251	chr19	+	761	2	ISM	ENSMUSG00000024661.8	ENSMUST00000235196.2	1494	5	-2	2259	-2	-1910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCGTCGCCACCGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	9957959	9960197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_9958255_9959731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013252	chr19	+	610	2	NNC	ENSMUSG00000024661.8	novel	1494	5	NA	NA	15	-2037	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTCGCCCAGAGTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	9957976	9960070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9958255_9959738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013253	chr19	+	564	2	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	15	-2087	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGCAGGATCCCGCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	9957976	9960020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9958259_9959738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013254	chr19	-	620	2	Antisense	novelGene_ENSMUSG00000024661.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGGTTGGCTGGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	9960096	9957997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_9958244_9959722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013255	chr19	+	442	2	NNC	ENSMUSG00000024661.8	novel	1494	5	NA	NA	125	-2106	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGCCAGCGCTCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	9958086	9960001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9958259_9959731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013256	chr19	-	427	2	Antisense	novelGene_ENSMUSG00000024661.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCCTGAAGGGTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	9960069	9958169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_9958250_9959722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013257	chr19	+	1081	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	-145	-7	-145	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATTGAGGATAAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	9959864	9962469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013258	chr19	-	520	2	Antisense	novelGene_ENSMUSG00000024661.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGCGTGTTGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	9961691	9959971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_9960339_9961538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013259	chr19	+	906	4	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	9960025	9962462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9960348_9961544_9961692_9961930_9962050_9962144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013260	chr19	-	435	2	Antisense	novelGene_ENSMUSG00000024661.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGCGGGATCCTGCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	9961670	9960039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_9960343_9961538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013261	chr19	-	409	2	Antisense	novelGene_ENSMUSG00000024661.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGGGCCGCACTTATA	NA	NA	NA	NA	NA	NA	NA	NA	9961668	9960055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr19_-_9960335_9961538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013262	chr19	+	888	4	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	-31	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTGATTGAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	9960055	9962463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9960348_9961544_9961696_9961923_9962050_9962144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013263	chr19	+	875	4	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	9960056	9962462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9960341_9961544_9961692_9961923_9962050_9962144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013264	chr19	+	868	4	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	9960067	9962462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9960348_9961544_9961696_9961930_9962050_9962144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013265	chr19	+	752	4	FSM	ENSMUSG00000024661.8	ENST00000526640.5	731	4	0	-21	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTCTTTGTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	9960092	9962458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_9960258_9961544_9961692_9961923_9962050_9962144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013266	chr19	+	850	4	NNC	ENSMUSG00000024661.8	novel	929	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	9960092	9962462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9960352_9961544_9961692_9961923_9962050_9962144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013267	chr19	+	692	4	NNC	ENSMUSG00000024661.8	novel	731	4	NA	NA	40	8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTACCCAGCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	9960132	9962445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_9960258_9961544_9961692_9961930_9962050_9962144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013268	chr19	+	322	1	NIC	ENSMUSG00000024661.8	novel	929	4	NA	NA	2044	2	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTCTTTGTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	9962136	9962458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_9962100_9962500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013269	chr19	-	441	4	ISM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	35396	1414	35396	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGAGACTGAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	10043714	10041542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013270	chr19	-	401	4	ISM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	35134	1921	35134	-507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGGTGAGCTCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	10043976	10042049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10042176_10042965_10043046_10043615_10043713_10043878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013271	chr19	-	433	3	ISM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	12641	19793	12641	-18379	internal_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTTGATTAGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	10066469	10059921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10060055_10066065_10066168_10066271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013272	chr19	-	391	3	ISM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	9895	25957	9895	-24543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCATTGGCCACTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	10069215	10066085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10066168_10066271_10066470_10069104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013273	chr19	-	415	3	ISM	ENSMUSG00000024665.9	ENST00000522056.5	1362	12	45	24728	45	-24728	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGACATCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	10160588	10066270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10066470_10069104_10069216_10160483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013274	chr19	+	355	1	ISM	ENSMUSG00000010663.6	ENSMUST00000235160.2	3301	11	13584	0	13584	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTATTCATTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10173886	10174241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10173900_10174200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013275	chr19	+	3305	2	FSM	ENSMUSG00000064032.3	ENSMUST00000150038.2	3332	2	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAAGGTTATCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	10175758	10179748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_10175869_10176553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013276	chr19	-	2348	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	0	-7	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGAATGTTTGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	10181432	10176494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_10178462_10181051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013277	chr19	-	1968	1	NIC	ENSMUSG00000024742.16	novel	2373	3	NA	NA	2795	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTGAATGTTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10178463	10176495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_10176500_10178500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013278	chr19	-	2136	2	NNC	ENSMUSG00000024742.16	novel	2341	2	NA	NA	37	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGTCTGAATGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	10181221	10176498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_10178462_10181048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013279	chr19	-	2187	3	FSM	ENSMUSG00000024742.16	ENSMUST00000156291.2	2373	3	11	175	11	-165	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGGCATTAAGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	10181522	10176670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_10178462_10181051_10181384_10181458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013280	chr19	-	492	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	13	1595	13	-1591	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGGATGGAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	10181294	10178096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_10178462_10181167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013281	chr19	+	608	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTCCATTCTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10181375	10185188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013282	chr19	+	575	4	NNC	ENSMUSG00000036372.15	novel	606	4	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTCCATTCTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10181406	10185188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_10181629_10183787_10183896_10184527_10184665_10185080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013283	chr19	+	538	4	NNC	ENSMUSG00000036372.15	novel	606	4	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTCCATTCTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10181440	10185188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_10181629_10183790_10183896_10184527_10184665_10185080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013284	chr19	-	530	1	Genic_Genomic	ENSMUSG00000024668.9	novel	NA	NA	NA	NA	16322	2	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCCCCAGGACCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	10478425	10477895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_10477900_10478400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013285	chr19	-	748	3	ISM	ENSMUSG00000024668.9	ENSMUST00000235222.2	817	4	8755	-106	-4	106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCTATCGTCTATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	10494751	10480074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10480494_10494343_10494454_10494532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013286	chr19	-	399	2	FSM	ENSMUSG00000024668.9	ENST00000543265.1	386	2	-6	-7	-6	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCACTGACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	10494753	10480315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_10480494_10494532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013287	chr19	-	386	2	NNC	ENSMUSG00000024668.9	novel	386	2	NA	NA	2	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTGGCACTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	10494745	10480317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_10480491_10494532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013288	chr19	-	391	2	NNC	ENSMUSG00000024668.9	novel	386	2	NA	NA	3	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTGGCACTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	10494744	10480317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_10480494_10494529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013289	chr19	+	549	5	FSM	ENSMUSG00000034820.5	ENST00000541963.5	549	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGCTCAGGCTCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	10502656	10510781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510226_10510288_10510656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013290	chr19	+	255	2	ISM	ENSMUSG00000034820.5	ENST00000626926.1	306	3	5772	-1	5772	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTACTGGTGCCGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	10509142	10509528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10509364_10509494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013291	chr19	+	1651	4	ISM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	10906	-964	10840	-719	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCCATTTTCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	10514210	10524298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10514282_10516983_10517153_10518044_10518213_10523055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013292	chr19	+	1285	1	ISM	ENSMUSG00000034820.5	ENST00000439958.8	3475	10	21105	0	20364	0	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	10523734	10525019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10523700_10525000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013293	chr19	-	587	1	NIC	ENSMUSG00000024667.13	novel	1101	5	NA	NA	4704	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGGTTGATTTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	10528411	10527824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_10527800_10528400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013294	chr19	-	849	3	ISM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	1129	-4	1129	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAAAAGTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	10531986	10527851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10528405_10529136_10529339_10531892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013295	chr19	-	1590	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	10554726	10547841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013296	chr19	-	407	1	ISM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	6201	2	6201	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	10548250	10547843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10547800_10548200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013297	chr19	+	501	3	ISM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	306	6174	269	-6174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCACTGCCTACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	10555123	10559738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10555448_10557826_10557927_10559661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013298	chr19	+	367	3	ISM	ENSMUSG00000034445.9	ENSMUST00000237581.2	2634	9	1516	7326	1516	-6052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGTAAGTTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	10556370	10559860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10556439_10557826_10557927_10559661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013299	chr19	+	387	3	ISM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	3059	3229	3022	-3229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATCGCACACCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	10557876	10562683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10557927_10559661_10559861_10562545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013300	chr19	+	408	3	ISM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	7727	684	7690	-684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGCCAACAGCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	10562544	10565228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10562755_10564054_10564210_10565185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013301	chr19	+	1615	3	ISM	ENSMUSG00000034445.9	ENSMUST00000237581.2	2634	9	9199	-4	9199	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGAGGTCTCTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	10564053	10567190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10564210_10565185_10565343_10565888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013302	chr19	+	415	1	Genic_Genomic	ENSMUSG00000034445.9	novel	NA	NA	NA	NA	11927	3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTTTTGTTCAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	10566781	10567196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_10566800_10567200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013303	chr19	+	856	2	ISM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	22614	8	22614	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGAAGAAACTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	10605788	10607174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10605913_10606442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013304	chr19	+	457	1	Genic_Genomic	ENSMUSG00000024740.11	novel	NA	NA	NA	NA	23555	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTATTGGTCTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10606729	10607186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_10606700_10607200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013305	chr19	+	375	1	ISM	ENSMUSG00000048832.10	ENSMUST00000235927.2	2690	5	25501	0	25487	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	10691615	10691990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10691600_10692000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013306	chr19	+	1340	6	FSM	ENSMUSG00000024737.3	ENST00000681951.1	1539	6	162	37	162	-37	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGTTCCCATAAATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10820540	10835238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10833251_10833411_10834993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013307	chr19	-	586	1	ISM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	11533	0	11371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGACACTCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	10835771	10835185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10835200_10835800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013308	chr19	-	807	3	ISM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	9716	816	9554	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTATGCTCTTCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	10837588	10836001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10836516_10836927_10837120_10837487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013309	chr19	-	1380	1	Genic_Genomic	ENSMUSG00000034659.15	novel	NA	NA	NA	NA	9963	1	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCTGACAAACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	10849402	10848022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_10848000_10849400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013310	chr19	-	1477	2	ISM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	9303	125	9303	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCTTACTGAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	10850062	10848148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_10849514_10849950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013311	chr19	-	1861	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	53	274	53	-274	multi-exon	TRUE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGATCTGTTCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	10859312	10848297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013312	chr19	+	441	3	ISM	ENSMUSG00000024735.14	ENST00000584766.1	543	4	2	276	2	-276	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCTCCCCAGTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	10879712	10880828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10879864_10880065_10880182_10880654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013313	chr19	+	321	3	ISM	ENSMUSG00000024735.14	ENST00000584766.1	543	4	424	0	424	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTAGAGGCTGCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	10880134	10881104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_10880182_10880654_10880826_10881001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013314	chr19	+	194	2	NNC	ENSMUSG00000024735.14	novel	543	4	NA	NA	1026	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTAGAGGCTGCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	10880736	10881104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_10880828_10881001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013315	chr19	-	2809	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	196	-2	196	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTTGCTCCGGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	10926434	10918842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013316	chr19	+	347	4	FSM	ENSMUSG00000101389.2	ENST00000532114.6	341	4	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACTTTAATTTGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	11356207	11367732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_11356261_11358687_11358817_11363746_11363804_11367624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013317	chr19	+	288	3	NNC	ENSMUSG00000101389.2	novel	341	4	NA	NA	2477	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCACTTTAATTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	11358686	11367730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_11358817_11363746_11363799_11367624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013318	chr19	+	280	3	NNC	ENSMUSG00000101389.2	novel	341	4	NA	NA	2477	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCACTTTAATTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	11358686	11367730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_11358817_11363759_11363804_11367624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013319	chr19	-	595	6	FSM	ENSMUSG00000024680.13	ENST00000617306.1	636	6	42	-1	30	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATCTTGAAAGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	11600977	11594806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_11594936_11595779_11595879_11596217_11596374_11596980_11597038_11600046_11600147_11600923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013320	chr19	+	824	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	58	280	58	-280	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTACTGTCCTGAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	11747812	11752044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013321	chr19	+	590	1	ISM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	3980	0	3980	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTATCTCCGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	11751734	11752324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_11751700_11752300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013322	chr19	-	820	3	ISM	ENSMUSG00000041488.17	ENST00000529177.5	1491	10	33327	1	33196	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCACTCTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	11762889	11755964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_11756538_11760389_11760501_11762753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013323	chr19	+	1524	1	ISM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	31169	0	31169	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGATGTCCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	11920931	11922455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_11920900_11922500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013324	chr19	+	3134	2	ISM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	10400	-6	10400	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTAGTTATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	12561286	12567132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_12561487_12564198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013325	chr19	-	1232	1	Genic_Genomic	ENSMUSG00000024695.17	novel	NA	NA	NA	NA	27879	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCCTTTTAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	12745611	12744379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_12744400_12745600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013326	chr19	+	603	4	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	-1	8372	-1	-8372	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAAGCCCCACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	12781293	12802336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_12781455_12796699_12796800_12801307_12801476_12802162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013327	chr19	+	529	4	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	15403	8170	15403	-8170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGGGCTACAGCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	12796697	12802538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_12796800_12801307_12801476_12802162_12802337_12802453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013328	chr19	+	568	4	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	20019	587	20019	-587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATGCTCAATTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	12801313	12810121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_12801476_12802162_12802337_12802453_12802536_12809971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013329	chr19	+	668	4	ISM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	20866	-1	20866	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTAGTTCTCCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	12802160	12810709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_12802337_12802453_12802536_12809971_12810121_12810448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013330	chr19	+	664	4	NNC	ENSMUSG00000024696.10	novel	1093	7	NA	NA	20866	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGTTCTCCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	12802160	12810710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_12802337_12802453_12802536_12809971_12810116_12810448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013331	chr19	+	485	3	NNC	ENSMUSG00000024696.10	novel	1093	7	NA	NA	21169	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACAGTAGTTCTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	12802463	12810708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_12802536_12809971_12810125_12810448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013332	chr19	+	591	1	FSM	ENSMUSG00000091014.4	ENSMUST00000189517.2	743	1	152	0	152	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGGAATGCTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	12824197	12824788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_12824200_12824800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013333	chr19	+	2308	2	FSM	ENSMUSG00000096365.5	ENSMUST00000207246.4	2315	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAACTTCTGAAAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	13208698	13213764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_13208839_13211596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013334	chr19	+	722	2	FSM	ENSMUSG00000061387.4	ENST00000395079.2	948	2	227	-1	224	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTATTCTAAGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	13632033	13685662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_13632733_13685639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013335	chr19	-	1483	1	Genic_Genomic	ENSMUSG00000024640.10	novel	NA	NA	NA	NA	18469	7	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGAGTGGGTGGGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	15883517	15882034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_15882000_15883500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013336	chr19	-	1213	3	ISM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	15181	91	15181	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTGCTGAGGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15886805	15882581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_15883516_15884293_15884432_15886664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013337	chr19	-	896	3	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	15286	-295	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAAGCTGCGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	15886700	15882785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_15883516_15884293_15884424_15886664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013338	chr19	-	958	4	ISM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	9655	438	9655	-438	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATGTAGTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	15892331	15882928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013339	chr19	-	339	1	Genic_Genomic	ENSMUSG00000041491.9	novel	NA	NA	NA	NA	28878	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	15933475	15933136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_15933100_15933500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013340	chr19	-	547	3	ISM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	23922	377	23922	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGCAAGTGAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	15938431	15933514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_15933768_15936895_15937065_15938306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013341	chr19	-	336	3	NNC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	10549	-13352	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGTCCAGGAAGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	15951804	15946489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_15946589_15948243_15948396_15951719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013342	chr19	-	470	2	ISM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	58	25876	58	-25876	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTGACTAGTCTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	15962295	15959013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_15959165_15961976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013343	chr19	+	476	3	ISM	ENSMUSG00000024639.6	ENST00000444815.2	1077	7	4	67216	4	-67216	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATCTGCACACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	16110693	16293535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_16110826_16196951_16197141_16293380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013344	chr19	+	404	3	ISM	ENSMUSG00000024639.6	ENST00000444815.2	1077	7	86313	51200	86313	-51200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGTCATTTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	16197002	16309551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_16197141_16293380_16293536_16309440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013345	chr19	+	413	3	ISM	ENSMUSG00000024639.6	ENST00000444815.2	1077	7	182691	48278	182691	-48278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGTACCCTTTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	16293380	16312473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_16293536_16309440_16309570_16312344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013346	chr19	+	339	3	ISM	ENSMUSG00000024639.6	ENST00000444815.2	1077	7	198761	5141	198761	-5141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCTTCTAGAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	16309450	16355610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_16309570_16312344_16312475_16355520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013347	chr19	+	472	3	ISM	ENSMUSG00000024639.6	ENST00000444815.2	1077	7	201652	-1	201652	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAACCGTGCCTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	16312341	16360752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_16312475_16355520_16355675_16360567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013348	chr19	+	347	2	ISM	ENSMUSG00000024639.6	ENST00000444815.2	1077	7	244822	0	244822	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTAACCGTGCCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	16355511	16360751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_16355675_16360567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013349	chr19	+	1673	1	ISM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	252960	0	252465	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTGCTCTTCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	16363154	16364827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_16363200_16364800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013350	chr19	+	472	2	ISM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	45	5985	45	-5985	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCTTTTAAATGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	17371451	17372728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_17371757_17372561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013351	chr19	+	413	3	ISM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	192	2669	192	-2669	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGTTTATATTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	17371598	17376044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_17371757_17372561_17372714_17375941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013352	chr19	+	516	3	ISM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	1238	1533	1238	-1533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTTGTACTGAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	17372644	17377180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_17372714_17375941_17376045_17376836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013353	chr19	+	368	1	Genic_Genomic	ENSMUSG00000024712.10	novel	NA	NA	NA	NA	6940	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATCCTGTATCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	17378346	17378714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_17378300_17378700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013354	chr19	+	139	1	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTACCTGTAACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17670771	17670910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr19_+_17670800_17670900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013355	chr19	+	830	1	FSM	ENSMUSG00000117822.2	ENSMUST00000236146.2	1387	1	557	0	557	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATTACCCCTAACACC	NA	NA	NA	NA	NA	NA	NA	NA	17904543	17905373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_17904500_17905400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013356	chr19	-	444	1	Genic_Genomic	ENSMUSG00000024725.14	novel	NA	NA	NA	NA	51884	2	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTTGTGTCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18557133	18556689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_18556700_18557100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013357	chr19	-	575	3	ISM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	45175	1596	45039	-1596	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGAGTGGGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	18563978	18558287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_18558693_18562005_18562108_18563910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013358	chr19	-	498	7	ISM	ENSMUSG00000024725.14	ENST00000550242.1	579	9	35252	0	35252	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACAGGTATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18573765	18562015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013359	chr19	+	290	3	ISM	ENSMUSG00000037847.15	ENST00000376808.8	478	5	0	3864	0	-3864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCTTCCTACTGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	18616880	18618636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_18616973_18617249_18617299_18618487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013360	chr19	+	210	2	ISM	ENSMUSG00000037847.15	ENST00000376808.8	478	5	356	3865	356	-3865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCTTCCTACTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	18617236	18618635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_18617299_18618487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013361	chr19	+	340	3	ISM	ENSMUSG00000037847.15	ENST00000376808.8	478	5	1605	-1	1605	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGTGTTCTTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	18618485	18622501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_18618636_18619537_18619645_18622418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013362	chr19	+	141	2	NNC	ENSMUSG00000037847.15	novel	478	5	NA	NA	1715	-2856	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCCCTCTCTCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	18618595	18619644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_18618636_18619543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013363	chr19	+	185	2	ISM	ENSMUSG00000037847.15	ENST00000376808.8	478	5	2647	14	2647	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAGAAGCAAAATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	18619527	18622486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_18619645_18622418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013364	chr19	+	83	1	NIC	ENSMUSG00000037847.15	novel	1357	9	NA	NA	5537	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAAGTGTTCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	18622417	18622500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_18622400_18622500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013365	chr19	+	693	1	ISM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	19786	0	12219	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCTCAATTCATACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	18629099	18629792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_18629100_18629800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013366	chr19	+	202	2	ISM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	334	29416	334	-29416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGATCCGGAAATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	18648461	18655148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_18648567_18655051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013367	chr19	+	1336	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	4	337	4	-337	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGACCTGTAGTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	18690560	18695455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_18691024_18694582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013368	chr19	+	1235	2	FSM	ENSMUSG00000047044.8	ENSMUST00000055792.8	1631	2	-34	430	9	-430	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCCCCTCCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	18690565	18695362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_18691024_18694585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013369	chr19	+	924	1	Genic_Genomic	ENSMUSG00000047044.8	novel	NA	NA	NA	NA	4271	2	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTATCAGTGACTAATT	NA	NA	NA	NA	NA	NA	NA	NA	18694870	18695794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_18694900_18695800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013370	chr19	+	267	2	ISM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	236	10377	236	-5827	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATGCTGTGTAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	21249877	21253827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21250107_21253789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013371	chr19	+	273	2	ISM	ENSMUSG00000024750.12	ENSMUST00000025659.12	2467	6	3179	5201	3179	-5201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTGAACGTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	21253788	21254453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21253950_21254341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013372	chr19	+	176	2	ISM	ENSMUSG00000024750.12	ENSMUST00000025659.12	2467	6	4464	2539	4464	-2539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAACACAATTCATATCT	NA	NA	NA	NA	NA	NA	NA	NA	21255073	21257115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21255123_21256988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013373	chr19	+	225	1	Genic_Genomic	ENSMUSG00000024750.12	novel	NA	NA	NA	NA	13374	4	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGTTGGATCCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	21263983	21264208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_21264000_21264200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013374	chr19	-	389	4	ISM	ENSMUSG00000058624.14	ENSMUST00000237823.2	3475	14	25938	7536	25938	-5404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTAGCCACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	21392285	21377954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_21378070_21387235_21387304_21389861_21389960_21392177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013375	chr19	-	407	5	ISM	ENSMUSG00000058624.14	ENST00000376986.5	1337	13	49466	14690	17752	-14690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGTAAGCAGCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	21400471	21387240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_21387304_21389861_21389960_21392177_21392286_21396737_21396766_21400361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013376	chr19	-	430	4	ISM	ENSMUSG00000058624.14	ENSMUST00000237823.2	3475	14	6575	29943	6575	-27811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCCTAGGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	21411648	21400361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_21400468_21402894_21402983_21405842_21406015_21411584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013377	chr19	-	517	4	ISM	ENSMUSG00000058624.14	ENST00000376986.5	1337	13	34	30344	34	-30344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCAGCTAAAAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	21449903	21402894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_21402983_21405842_21406015_21411584_21411670_21449731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013378	chr19	-	1494	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	121	-1	62	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGTCTTGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21630219	21574674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013379	chr19	+	333	2	ISM	ENSMUSG00000024754.14	ENST00000377066.9	4616	22	104	59572	104	-59572	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTGACCTCAGATGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	21770103	21774782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21770345_21774690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013380	chr19	+	279	2	ISM	ENSMUSG00000024754.14	ENST00000377066.9	4616	22	4690	58987	4690	-58987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATGGCAAGTCAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	21774689	21775367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21774832_21775230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013381	chr19	+	500	3	ISM	ENSMUSG00000024754.14	ENST00000377066.9	4616	22	5481	47704	5481	-47704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTCGGTGAGATCATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	21775480	21786650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21775793_21779225_21779396_21786632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013382	chr19	+	365	2	ISM	ENSMUSG00000024754.14	ENST00000377066.9	4616	22	19183	44573	19183	-44573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAATTAGTGGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	21789182	21789781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21789341_21789574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013383	chr19	+	387	2	ISM	ENSMUSG00000024754.14	ENST00000377066.9	4616	22	37162	24757	37162	-24757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGCCCAGGTAGGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	21807161	21809597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21807342_21809390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013384	chr19	+	314	2	ISM	ENSMUSG00000024754.14	ENST00000377066.9	4616	22	39502	21364	39502	-21364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGCTTTTTTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	21809501	21812990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_21809607_21812781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013385	chr19	+	1348	2	FSM	ENSMUSG00000118273.2	ENSMUST00000235257.2	1340	2	-1	-7	-1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGAGTGTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	21969935	21998387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_21970174_21997277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013386	chr19	+	2201	1	FSM	ENSMUSG00000118353.2	ENSMUST00000235917.2	780	1	332	-1753	332	1753	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATCTTGAAATACACAT	NA	NA	NA	NA	NA	NA	NA	NA	22418830	22421031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_22418800_22421000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013387	chr19	+	4448	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	41	-3	41	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTACGTTCTTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	23118630	23145501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_23119624_23142046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013388	chr19	+	957	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	-45	-279	-45	279	mono-exon	FALSE	NA	NA	NA	NA	NA	2223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATGCTCACACAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	23653166	23654123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_23653200_23654100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013389	chr19	+	351	2	FSM	ENSMUSG00000074925.5	ENST00000472967.2	415	2	0	64	0	-64	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTGTGTGTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	23664806	23666138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_23664914_23665894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013390	chr19	+	312	1	Genic_Genomic	ENSMUSG00000074925.5	novel	NA	NA	NA	NA	787	4	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGGGGGGGGGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	23665894	23666206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_23665900_23666200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013391	chr19	-	533	1	ISM	ENSMUSG00000024812.12	ENSMUST00000233027.2	4668	23	78998	154	47653	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAGAATGAGTTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24072555	24072022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24072000_24072600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013392	chr19	-	837	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	40878	464	40878	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGATGTGAAGAGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	24079330	24072486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24072955_24073947_24074034_24078065_24078279_24079260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013393	chr19	-	608	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	33986	1931	33986	-1931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGTAAGGGCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24086222	24073953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24074034_24078065_24078279_24079260_24079362_24086008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013394	chr19	-	532	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	33061	6089	33061	-6089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTCCATCACCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	24087147	24078111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24078279_24079260_24079362_24086008_24086220_24087094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013395	chr19	-	583	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	31222	13987	31222	-13987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAGTGAAGTTCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24088986	24086009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24086220_24087094_24087175_24088384_24088481_24088789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013396	chr19	-	583	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	29887	15071	29887	-15071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAAACTCCTCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	24090321	24087093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24087175_24088384_24088481_24088789_24088984_24090109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013397	chr19	-	652	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	22748	16781	22748	-16781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTCGGGAAGGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	24097460	24088803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24088984_24090109_24090321_24091439_24091549_24097308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013398	chr19	-	841	4	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	11477	27643	11477	-27643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCATTCCTCCACTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	24108731	24099665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24099736_24101931_24102086_24103068_24103173_24108218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013399	chr19	-	743	3	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	7884	36286	7884	-36286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGTCTAGGTCACGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	24112324	24108308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24108838_24109969_24110073_24112213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013400	chr19	-	1115	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATGTCTTACACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24257970	24238816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013401	chr19	-	772	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	83	0	83	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTCATCTTGAATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	24454637	24453865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_24453900_24454600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013402	chr19	+	786	1	FSM	ENSMUSG00000058927.7	ENSMUST00000073080.7	946	1	160	0	160	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGTTGATCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	24853209	24853995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_24853200_24854000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013403	chr19	-	734	1	ISM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	40952	0	40838	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTGTGATGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	24898013	24897279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24897300_24898000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013404	chr19	-	989	5	ISM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	33224	114	33110	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCTTAACTACTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	24905741	24897393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013405	chr19	-	399	4	ISM	ENSMUSG00000024878.10	ENST00000382447.8	1094	14	38651	1	38651	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGGAAGAACTGACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24900200	24897944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013406	chr19	-	313	1	ISM	ENSMUSG00000024878.10	ENST00000377447.7	1878	9	21896	0	21896	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGACAGTGGGTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	24916955	24916642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24916600_24917000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013407	chr19	-	335	2	ISM	ENSMUSG00000024878.10	ENST00000377447.7	1878	9	20649	1021	20649	-1021	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACTGACTCTCCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	24918202	24917663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24917904_24918107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013408	chr19	-	430	4	ISM	ENSMUSG00000024878.10	ENST00000377447.7	1878	9	-48	13979	0	-13979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATGACATTACTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	24938899	24930621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_24930716_24932699_24932797_24935267_24935355_24938747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013409	chr19	+	2026	4	FSM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	83	228	83	-228	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTCTTGGCAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	25649857	25656127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_25650123_25650779_25651341_25652914_25653018_25655030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013410	chr19	+	1193	1	Genic_Genomic	ENSMUSG00000048138.11	novel	NA	NA	NA	NA	5389	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTATTTGTTGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	25655163	25656356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_25655200_25656400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013411	chr19	+	427	3	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	130	14841	130	-14841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGATGAAAGCCCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	27194886	27212286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27195097_27207595_27207716_27212189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013412	chr19	+	243	2	NNC	ENSMUSG00000024924.15	novel	3260	17	NA	NA	17517	-11466	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATCAGACGAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	27212273	27215661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_27212308_27215452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013413	chr19	+	250	2	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	17520	11461	17520	-11461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGACGAGTCTCTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	27212276	27215666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27212313_27215452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013414	chr19	+	386	3	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	20928	10881	20928	-10881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGAGGGAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	27215684	27216246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27215825_27215909_27216033_27216123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013415	chr19	+	363	3	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	21374	9756	21374	-9756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGACTTGGGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	27216130	27217371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27216247_27217021_27217142_27217244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013416	chr19	+	293	2	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	22493	9090	22493	-9090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTCCACTTGCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	27217249	27218037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27217371_27217865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013417	chr19	+	254	2	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	23873	6633	23873	-6633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTAAAATAGAAAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	27218629	27220494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27218854_27220464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013418	chr19	+	256	2	NNC	ENSMUSG00000024924.15	novel	3260	17	NA	NA	23873	-6635	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAGCTAAAATAGAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	27218629	27220492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_27218858_27220464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013419	chr19	+	230	2	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	25707	5860	25707	-5860	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATCCTCTTGCACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	27220463	27221267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27220584_27221157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013420	chr19	+	287	2	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	26400	5383	26400	-5383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGAGGTGCCCACTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	27221156	27221744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27221298_27221598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013421	chr19	+	256	2	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	26866	4055	26866	-4055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCAAAGTAAGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	27221622	27223072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27221741_27222934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013422	chr19	+	234	2	ISM	ENSMUSG00000024924.15	ENST00000680746.1	3597	18	28275	3204	28176	-3050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTCCAGCACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	27222932	27224077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27223082_27223992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013423	chr19	+	331	3	ISM	ENSMUSG00000024924.15	ENST00000680746.1	3597	18	29335	1859	29236	-1705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAAGTATACTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	27223992	27225422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27224077_27224409_27224491_27225256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013424	chr19	+	360	2	ISM	ENSMUSG00000024924.15	ENSMUST00000047645.13	3260	17	30495	438	30495	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATATTACTTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	27225251	27226689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27225427_27226504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013425	chr19	+	239	1	ISM	ENSMUSG00000024924.15	ENSMUST00000167487.8	7971	19	32287	4349	32287	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGGTATACAACCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	27227043	27227282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_27227000_27227300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013426	chr19	-	1623	1	Genic_Genomic	ENSMUSG00000041360.9	novel	NA	NA	NA	NA	39506	1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGTTTGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	27367719	27366096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_27366100_27367700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013427	chr19	-	2101	5	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	30048	16	30048	-16	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAGGACACAGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	27377177	27366113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013428	chr19	+	375	3	ISM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	25589	4465	25589	-4465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCATGGTGATCGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	28882011	28886887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_28882135_28882732_28882928_28886830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013429	chr19	+	463	3	ISM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	26433	2043	26433	-2043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATTGAGGCCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	28882855	28889309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_28882928_28886830_28886966_28889053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013430	chr19	+	678	2	ISM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	33733	316	33733	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAGTTGGCCACGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	28890155	28891036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_28890486_28890688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013431	chr19	+	354	1	ISM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	78525	8	34576	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTATCTTTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	28890998	28891352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_28891000_28891400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013432	chr19	+	2696	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	163	0	163	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATTTCTGCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	28941515	28944211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_28941500_28944200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013433	chr19	+	944	1	Genic_Genomic	ENSMUSG00000024780.8	novel	NA	NA	NA	NA	17249	25	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTTTTTTTTAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	28985148	28986092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_28985100_28986100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013434	chr19	-	1146	1	Genic_Genomic	ENSMUSG00000024782.8	novel	NA	NA	NA	NA	25926	1	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTGTCTCCATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	28999377	28998231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_28998200_28999400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013435	chr19	-	1519	4	ISM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	9984	993	9926	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATCCTCTTGTCTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	29015377	28999225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013436	chr19	-	632	4	FSM	ENSMUSG00000024782.8	ENST00000447596.4	638	4	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGAGGGCAGCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	29025302	29000230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29025078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013437	chr19	+	281	3	ISM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	22	21948	22	-21948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATGTGTGAACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	29078907	29098745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_29079041_29093122_29093195_29098669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013438	chr19	+	236	3	ISM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	14276	21400	14276	-21400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGCATTAAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	29093161	29099293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_29093195_29098669_29098745_29099165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013439	chr19	+	255	2	ISM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	20278	15167	20278	-15167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCCTTCCAGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	29099163	29105526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_29099291_29105398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013440	chr19	+	1092	4	ISM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	26621	0	26510	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	29105395	29121243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_29105525_29108049_29108207_29111799_29111904_29120541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013441	chr19	+	706	1	NIC	ENSMUSG00000024785.8	novel	1884	9	NA	NA	41656	4	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTGTAGTGTAAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	29120541	29121247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_29120500_29121200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013442	chr19	-	694	2	FSM	ENSMUSG00000050957.5	ENSMUST00000052380.5	708	2	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGCTTATATGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29302742	29298743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_29299140_29302444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013443	chr19	-	310	1	ISM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	13062	0	12965	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAATGTCCTGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	29326308	29325998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_29326000_29326300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013444	chr19	-	510	3	ISM	ENSMUSG00000016495.13	ENSMUST00000016639.12	1012	7	10801	27	10704	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAATAAAATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	29328569	29326131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_29326406_29327759_29327870_29328443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013445	chr19	-	327	3	ISM	ENSMUSG00000016495.13	ENSMUST00000016639.12	1012	7	1045	2339	948	-2339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCTTTACAATTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	29338325	29328443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_29328575_29335716_29335804_29338216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013446	chr19	-	316	3	ISM	ENSMUSG00000016495.13	ENSMUST00000152936.8	604	4	-61	9660	36	-9632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGCATGCTCGGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	29339334	29335736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_29335804_29338216_29338328_29339196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013447	chr19	+	279	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	165	24590	165	-24590	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAGGACCCCCGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	29414790	29423452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_29414936_29423318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013448	chr19	+	288	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	8830	16023	8830	-16023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGCCTGTGGCCTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	29423455	29432019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_29423589_29431864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013449	chr19	+	295	2	ISM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	17235	0	17235	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCGAAGAGGAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	29431860	29448042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_29432029_29447915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013450	chr19	+	127	1	ISM	ENSMUSG00000016498.11	ENSMUST00000112576.4	1649	6	59597	519	33290	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCGAAGAGGAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	29447915	29448042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_29447900_29448000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013451	chr19	+	838	2	ISM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	61576	218	61576	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGACAGAGATGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	30069488	30070904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_30069540_30070117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013452	chr19	+	785	1	Genic_Genomic	ENSMUSG00000024817.14	novel	NA	NA	NA	NA	62429	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGCATCCAGCTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	30070341	30071126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_30070300_30071100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013453	chr19	-	1555	1	ISM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	264231	0	86732	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTATTATATTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32101681	32100126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_32100100_32101700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013454	chr19	-	489	1	FSM	ENSMUSG00000062456.5	ENSMUST00000078034.5	714	1	242	-17	242	17	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGCATAAAGGCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	32443736	32443247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_32443200_32443700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013455	chr19	+	2611	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGCACTCATTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	32463171	32492765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013456	chr19	+	2278	1	FSM	ENSMUSG00000118106.2	ENSMUST00000235511.2	2276	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTAGATATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32463322	32465600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_32463300_32465600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013457	chr19	-	1658	1	ISM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	39036	0	38832	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGCCTCTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	32650695	32649037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_32649000_32650700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013458	chr19	-	1629	2	ISM	ENSMUSG00000013662.7	ENST00000308448.11	3161	10	35277	488	35277	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATATCCTGTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	32654250	32650269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_32651765_32654116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013459	chr19	-	741	1	Genic_Genomic	ENSMUSG00000035783.10	novel	NA	NA	NA	NA	13767	7	mono-exon	FALSE	NA	NA	NA	NA	NA	1548	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCGTATTATTTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	34219223	34218482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_34218500_34219200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013460	chr19	-	1459	6	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	7051	-1	7051	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2953	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGCCTTGCGTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	34225939	34218488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_34219211_34220716_34220899_34222311_34222504_34223477_34223640_34224051_34224137_34225823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013461	chr19	-	786	2	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	12080	129	12080	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACCAGATAGGTAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	34220910	34218618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_34219211_34220716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013462	chr19	-	753	3	NNC	ENSMUSG00000035783.10	novel	2035	9	NA	NA	10606	-211	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATATATATTAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	34222384	34218700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_34219211_34220716_34220887_34222311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013463	chr19	-	1006	7	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	3013	2235	3013	-2235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCAAGGTACCACACTAA	NA	NA	NA	NA	NA	NA	NA	NA	34229977	34220724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_34220899_34222311_34222504_34223477_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013464	chr19	-	1015	7	ISM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	2	3937	2	-3937	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCTCCTCTTCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	34232988	34222426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_34222504_34223477_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824_34229977_34232689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013465	chr19	+	682	1	ISM	ENSMUSG00000024778.14	ENSMUST00000025691.13	1481	9	36425	0	36409	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTGTTGTCTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	34304490	34305172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_34304500_34305200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013466	chr19	-	1370	1	Genic_Genomic	ENSMUSG00000024781.17	novel	NA	NA	NA	NA	33789	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGGTGTGGTGTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	34471085	34469715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_34469700_34471100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013467	chr19	-	1136	3	ISM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	27305	905	27305	-905	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTCATGTGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	34477569	34470622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_34471614_34472459_34472532_34477496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013468	chr19	+	236	2	ISM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	17418	35535	17418	-35525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATAGAACTTGAAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	34917209	34917610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_34917328_34917492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013469	chr19	+	243	3	ISM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	30477	19735	30477	-19725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCAGGCAGAGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	34930268	34933410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_34930391_34932111_34932173_34933350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013470	chr19	+	205	2	ISM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	43737	7520	43737	-7510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTATTCAGTAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	34943528	34945625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_34943624_34945515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013471	chr19	+	239	2	ISM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	47541	3295	47541	-3285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCGTTTCAGAGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	34947332	34949850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_34947518_34949796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013472	chr19	+	226	1	ISM	ENSMUSG00000024795.12	ENSMUST00000087341.7	5564	32	53149	0	53118	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	34952909	34953135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_34952900_34953100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013473	chr19	+	264	1	ISM	ENSMUSG00000024805.17	ENSMUST00000225920.2	6443	9	107629	4769	46190	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAATGCCAGCTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	36433337	36433601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_36433300_36433600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013474	chr19	+	2108	2	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	55736	710	55736	-710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGAAATTTAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36867367	36870167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_36867449_36868140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013475	chr19	+	2032	1	ISM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	57214	0	57214	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTCTTGATTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	36868845	36870877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_36868800_36870900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013476	chr19	-	708	1	ISM	ENSMUSG00000039652.17	ENST00000412050.8	7522	10	154936	0	154936	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGACACGTGTCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36997451	36996743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_36996700_36997500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013477	chr19	-	734	2	ISM	ENSMUSG00000039652.17	ENSMUST00000154376.8	5671	11	131376	2641	130300	119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTTGATGTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	37022087	37001919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37002488_37021921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013478	chr19	-	752	2	ISM	ENSMUSG00000039652.17	ENSMUST00000126781.2	2095	9	32853	85096	333	-85096	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGACTGACCATGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	37152054	37116557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37116622_37151366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013479	chr19	-	834	2	ISM	ENSMUSG00000039652.17	ENSMUST00000126781.2	2095	9	70	120234	12	-120234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCGGCTGCTGCGGCCGCG	NA	NA	NA	NA	NA	NA	NA	NA	37184837	37151695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37152386_37184693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013480	chr19	+	908	3	ISM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	12756	209	12731	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAACAGGAGGAAGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	37197697	37199341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37197886_37198037_37198205_37198788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013481	chr19	+	587	1	Genic_Genomic	ENSMUSG00000023307.15	novel	NA	NA	NA	NA	13998	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGTACTTTTGACTCGT	NA	NA	NA	NA	NA	NA	NA	NA	37198964	37199551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_37199000_37199600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013482	chr19	-	1170	1	ISM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	92699	0	92699	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	37247311	37246141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37246100_37247300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013483	chr19	-	595	2	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	92847	0	92770	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTTCAGTGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	37247240	37246393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37246631_37246882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013484	chr19	-	419	2	ISM	ENSMUSG00000056999.17	ENST00000678673.1	4191	24	91116	1492	91039	-1492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGATATCCCAATACAGT	NA	NA	NA	NA	NA	NA	NA	NA	37248971	37247885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37248237_37248903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013485	chr19	-	403	4	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	74480	15159	74403	-15159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCCGGTACAGAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	37265607	37261552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37261632_37262604_37262697_37264511_37264633_37265496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013486	chr19	-	404	4	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	64538	19137	64461	-19137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATAAGAAGAGATTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	37275549	37265530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37265608_37268068_37268214_37273281_37273365_37275450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013487	chr19	-	371	4	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	49095	34900	49018	-34900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGATCAAGTCACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37290992	37281293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37281396_37287186_37287291_37289481_37289563_37290908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013488	chr19	-	365	3	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	44587	45875	44510	-45875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGGAAGCCTGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	37295500	37292268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37292396_37292803_37292917_37295375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013489	chr19	-	409	3	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	37368	46410	37291	-46410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGCACGCACTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	37302719	37292803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37292917_37295375_37295499_37302546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013490	chr19	-	503	3	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	33498	48982	33421	-48982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAACTGCTAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	37306589	37295375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37295499_37302546_37302717_37306379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013491	chr19	-	525	3	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	32075	56192	31998	-56192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGAACCCCAAACACCCC	NA	NA	NA	NA	NA	NA	NA	NA	37308012	37302585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37302717_37306379_37306588_37307826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013492	chr19	-	423	3	ISM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	52	60079	-25	-60079	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGCTGGAAGTTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	37340035	37306472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_37306588_37307826_37308012_37339912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013493	chr19	+	385	3	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	14245	23696	14245	-23696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCGTGAGAAAAATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	37379095	37386611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37379340_37382132_37382229_37386566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013494	chr19	+	374	2	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	27056	17563	27056	-17563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACGTTCATAAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	37391906	37392744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37392098_37392561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013495	chr19	+	392	2	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	34928	8627	34928	-8627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAGAAAGCTGTAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	37399778	37401680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37400059_37401568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013496	chr19	+	367	2	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	36716	5228	36716	-5228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACAGTTAATACATACGT	NA	NA	NA	NA	NA	NA	NA	NA	37401566	37405079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37401792_37404937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013497	chr19	+	350	2	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	41496	1370	41496	-1370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAACTGTAGTTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	37406346	37408937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37406466_37408706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013498	chr19	+	364	1	ISM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	45093	0	45093	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	37409943	37410307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37409900_37410300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013499	chr19	+	434	1	ISM	ENSMUSG00000053799.9	ENSMUST00000238954.2	3728	23	162747	0	133167	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGGAGATTCTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	37672073	37672507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37672100_37672500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013500	chr19	+	693	3	ISM	ENSMUSG00000024987.7	ENST00000371531.5	1735	7	16	2517	16	-2488	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTTAGCGGCCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	37686056	37687496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37686257_37686738_37686964_37687228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013501	chr19	+	682	4	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	992	813	992	-813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTCCAGGAGGGTTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	37687237	37689171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37687520_37687598_37687758_37688343_37688479_37689065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013502	chr19	+	999	4	ISM	ENSMUSG00000024987.7	ENSMUST00000025946.7	1791	7	1361	-33	1361	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCATGGTGGTACATTG	NA	NA	NA	NA	NA	NA	NA	NA	37687606	37690017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37687758_37688343_37688479_37689065_37689219_37689457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013503	chr19	+	556	1	ISM	ENSMUSG00000024987.7	ENST00000371531.5	1735	7	3417	0	3212	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGCCCATGGTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	37689457	37690013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_37689500_37690000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013504	chr19	+	811	4	ISM	ENSMUSG00000024989.16	ENSMUST00000116506.8	1440	9	5039	3546	4990	-3546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGCCTGAGGTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	38048526	38058400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_38048805_38051050_38051120_38057527_38057679_38058087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013505	chr19	+	1343	4	ISM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	14596	292	14549	-292	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGTCAGTTTCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	38058085	38062577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_38058399_38059518_38059591_38060212_38060339_38061745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013506	chr19	+	1124	1	ISM	ENSMUSG00000024989.16	ENST00000371485.8	2634	9	18290	0	18212	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTAGTATGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38061748	38062872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_38061700_38062900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013507	chr19	+	598	2	FSM	ENSMUSG00000067242.12	ENST00000627699.1	654	2	57	-1	57	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGAACTTCGGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	38253318	38254384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_38253555_38254022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013508	chr19	+	365	1	NIC	ENSMUSG00000067242.12	novel	7780	8	NA	NA	760	3	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAACTTCGGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	38254021	38254386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_38254000_38254400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013509	chr19	+	689	2	ISM	ENSMUSG00000067242.12	ENSMUST00000196090.2	1789	6	36487	362	36344	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCTAAAGTCATGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	38289605	38294588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_38289774_38294067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013510	chr19	+	602	1	ISM	ENSMUSG00000067242.12	ENSMUST00000198518.5	7780	8	41622	5455	41344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACGTGTTCAGAAACAACT	NA	NA	NA	NA	NA	NA	NA	NA	38294605	38295207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_38294600_38295200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013511	chr19	-	339	2	ISM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	1091	27458	1091	-27458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAATAGTTCATCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	38806590	38804029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_38804160_38806381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013512	chr19	+	573	1	Genic_Genomic	ENSMUSG00000025001.12	novel	NA	NA	NA	NA	39569	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTTCATCCCAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	38958927	38959500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_38958900_38959500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013513	chr19	-	220	1	Genic_Genomic	ENSMUSG00000055044.13	novel	NA	NA	NA	NA	50230	6	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTGGAAGTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40209830	40209610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_40209600_40209800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013514	chr19	-	321	2	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	48457	1387	48457	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCAGCCAGCCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	40211603	40211003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40211216_40211494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013515	chr19	-	461	3	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	28017	1881	28017	-1881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTATTGGCTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	40232043	40211497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40211613_40218950_40219103_40231849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013516	chr19	-	418	3	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	19554	22247	19554	-22247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAACAGCAGGCCGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	40240506	40231863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40232044_40238062_40238148_40240353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013517	chr19	-	371	2	ISM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	54	30735	54	-30735	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCTGAGGAAATATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	40260006	40240351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40240506_40259789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013518	chr19	-	227	2	ISM	ENSMUSG00000025006.19	ENST00000354106.7	2939	26	81043	19329	81043	-19329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCCGAAAGGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	40303175	40302821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40302934_40303060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013519	chr19	-	230	2	ISM	ENSMUSG00000025006.19	ENST00000354106.7	2939	26	68165	29714	68165	-29714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACGATGATAAAGAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	40316053	40313206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40313277_40315893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013520	chr19	-	232	2	ISM	ENSMUSG00000025006.19	ENST00000354106.7	2939	26	30613	68153	30613	-68153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGCTTTTCATTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	40353605	40351645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40351710_40353437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013521	chr19	-	654	3	ISM	ENSMUSG00000025008.16	ENST00000265993.13	1695	13	6317	0	6317	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	40593899	40585620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40585987_40591248_40591387_40593749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013522	chr19	-	479	4	ISM	ENSMUSG00000025008.16	ENSMUST00000132452.2	1271	9	786	1565	358	-1565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCGTTCCTCTCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	40599858	40597133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40597252_40597345_40597455_40597645_40597777_40599737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013523	chr19	+	351	3	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	49	18183	49	-18183	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCAAGTTTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	40790842	40797918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_40790895_40795259_40795359_40797718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013524	chr19	+	321	3	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	8234	11769	8234	-11769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTCAATGATAAAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	40799027	40804332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_40799116_40801659_40801774_40804213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013525	chr19	+	343	2	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	13915	216	13915	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTTATCAATGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	40804708	40815885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_40804780_40815613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013526	chr19	+	309	1	ISM	ENSMUSG00000108929.3	ENSMUST00000224596.2	4762	34	78596	86	24999	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCGTGATGCTCAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	40815792	40816101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_40815800_40816100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013527	chr19	+	3629	5	ISM	ENSMUSG00000025010.15	ENST00000265992.9	3891	6	798	0	664	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTGCTGCTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40820415	40837016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013528	chr19	+	221	2	ISM	ENSMUSG00000025010.15	ENST00000403870.7	2196	6	13621	1744	13487	-1744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGACTGCACCGTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	40833238	40833580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_40833404_40833524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013529	chr19	+	2874	1	ISM	ENSMUSG00000025010.15	ENST00000265992.9	3891	6	14525	0	14391	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTGCTGCTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40834142	40837016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_40834100_40837000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013530	chr19	+	5347	2	FSM	ENSMUSG00000049164.8	ENST00000624776.3	6485	2	4	1134	4	-1133	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATAACCAAATGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40883177	40905254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_40883212_40899941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013531	chr19	+	5327	1	ISM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	17913	3	4459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGTTTCTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40901061	40906388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_40901100_40906400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013532	chr19	-	348	1	ISM	ENSMUSG00000061132.14	ENSMUST00000117695.8	1701	17	64873	0	64873	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGATGCATTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	40917718	40917370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_40917400_40917700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013533	chr19	-	580	1	ISM	ENSMUSG00000025016.12	ENSMUST00000025989.10	8096	14	49626	2948	49609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	41202810	41202230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_41202200_41202800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013534	chr19	-	596	2	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	46803	829	46803	-829	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTACTGCCATTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	41205616	41203059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_41203579_41205539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013535	chr19	-	580	4	ISM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	55	32918	55	-32918	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAATCTAACTAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	41252364	41235148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_41235243_41236344_41236468_41244583_41244780_41252197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013536	chr19	+	286	3	ISM	ENSMUSG00000025019.18	ENST00000356016.7	4831	8	14	34160	14	-31695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCAAAATATTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	41471591	41516525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41471738_41471965_41472040_41516459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013537	chr19	+	327	4	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	344	16232	337	-13774	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTCAGTGGCAAACG	NA	NA	NA	NA	NA	NA	NA	NA	41471991	41534446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41472040_41516459_41516526_41516999_41517080_41534313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013538	chr19	+	889	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTACATACAGATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	41514523	41515412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr19_+_41514500_41515400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013539	chr19	+	4566	5	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	45350	-40	-21080	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTGAATATTTCAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	41516997	41550718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013540	chr19	+	1476	3	ISM	ENSMUSG00000025019.18	ENST00000540664.6	2256	9	72963	0	6027	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCTGAATATTTCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	41544104	41550717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41544141_41546749_41547632_41550159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013541	chr19	+	1278	2	ISM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	75101	-39	8671	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCTGAATATTTCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	41546748	41550717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41547469_41550159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013542	chr19	+	618	2	ISM	ENSMUSG00000025019.18	ENST00000676414.1	1876	9	75788	262	8852	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTTTGATAAGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	41546929	41550455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41547252_41550159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013543	chr19	+	291	2	ISM	ENSMUSG00000025019.18	ENST00000675537.1	2435	9	76052	369	9524	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTAGAAAGTGAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	41547601	41550298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41547754_41550159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013544	chr19	+	1989	1	Genic_Genomic	ENSMUSG00000025019.18	novel	NA	NA	NA	NA	10652	1	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTGAATATTTCAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	41548729	41550718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_41548700_41550700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013545	chr19	+	2252	1	FSM	ENSMUSG00000067199.5	ENSMUST00000087155.5	2614	1	363	-1	363	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTTTATTTTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	41818771	41821023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_41818800_41821000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013546	chr19	+	720	3	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	-2	1839	-2	-1839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAAGTGTATCTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	41900359	41905260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41900626_41904043_41904319_41905081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013547	chr19	+	754	3	ISM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	3772	667	3772	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGGACCACATCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	41904133	41906432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41904319_41905081_41905263_41906044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013548	chr19	-	1457	1	ISM	ENSMUSG00000034321.15	ENSMUST00000112123.4	2296	6	9675	0	9417	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGAGTCCGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	41912187	41910730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_41910700_41912200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013549	chr19	-	1562	4	ISM	ENSMUSG00000034321.15	ENST00000370885.8	484	6	6599	-1283	6599	-406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCATGAAGACACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	41915005	41911136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_41912528_41913149_41913235_41913627_41913675_41914966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013550	chr19	-	422	5	FSM	ENSMUSG00000034321.15	ENST00000485122.6	423	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCTACCCCAAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	41921603	41912419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_41912528_41914970_41915005_41916463_41916553_41919794_41919870_41921487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013551	chr19	-	110	1	NIC	ENSMUSG00000034321.15	novel	2296	6	NA	NA	9075	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCTACCCCAAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	41912529	41912419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_41912400_41912500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013552	chr19	-	244	3	ISM	ENSMUSG00000034321.15	ENST00000370885.8	484	6	0	2547	0	-2547	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTGGTGGTTTGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	41921604	41914966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_41915005_41916463_41916553_41921487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013553	chr19	+	731	5	ISM	ENSMUSG00000025157.9	ENST00000345745.9	1099	8	1999	0	1999	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTAGCTCCAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	41928038	41932336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013554	chr19	-	2325	1	Genic_Genomic	ENSMUSG00000025159.9	novel	NA	NA	NA	NA	37725	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGTCCCATAACAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	41931846	41929521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_41929500_41931800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013555	chr19	+	1528	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTAGCACATGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	41970202	42023082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_41970448_42020327_42020556_42022027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013556	chr19	+	1079	1	Genic_Genomic	ENSMUSG00000025171.3	novel	NA	NA	NA	NA	51804	2	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGCACATGACTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	42022005	42023084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_42022000_42023100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013557	chr19	+	669	6	ISM	ENSMUSG00000025172.4	ENST00000455090.1	754	7	3812	0	3810	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTTCCTCGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	42028286	42032581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42028391_42028522_42028682_42028774_42028883_42030390_42030490_42030807_42030907_42032481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013558	chr19	-	1319	1	Genic_Genomic	ENSMUSG00000049670.10	novel	NA	NA	NA	NA	10085	3	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTATGAACTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	42064696	42063377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_42063400_42064700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013559	chr19	-	1545	3	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	8261	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	42066520	42063380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_42064695_42064893_42065004_42066399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013560	chr19	-	607	4	NNC	ENSMUSG00000049670.10	novel	601	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTGATGCCACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	42074781	42064452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_42064695_42066399_42066519_42066922_42067023_42074635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013561	chr19	+	2267	1	Genic_Genomic	ENSMUSG00000025178.10	novel	NA	NA	NA	NA	29357	7	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTCTGTGGAGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	42108266	42110533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_42108300_42110500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013562	chr19	-	462	1	Genic_Genomic	ENSMUSG00000018821.4	novel	NA	NA	NA	NA	5327	2	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGAGTGTGCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	42112171	42111709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_42111700_42112200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013563	chr19	-	892	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	0	152	0	-152	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGTATTATGCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	42117498	42111863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_42112288_42113186_42113466_42117309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013564	chr19	+	3060	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCTCACGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	42135844	42140142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_42137999_42139236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013565	chr19	+	647	5	ISM	ENSMUSG00000018820.14	ENST00000370613.7	911	8	18	5513	18	-5513	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCCAAAGAAATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	42160003	42174389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42160183_42171097_42171211_42171866_42172004_42172556_42172629_42174243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013566	chr19	+	389	4	ISM	ENSMUSG00000018820.14	ENST00000370610.7	1030	9	151	7908	151	-7908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCGAGGTGAGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	42167877	42171994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42167930_42169940_42170037_42171097_42171211_42171866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013567	chr19	+	340	3	ISM	ENSMUSG00000018820.14	ENST00000370610.7	1030	9	3371	7273	3371	-7273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGCCCTCTCCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	42171097	42172629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42171211_42171866_42172004_42172539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013568	chr19	+	374	3	ISM	ENSMUSG00000018820.14	ENST00000370610.7	1030	9	4138	5513	4138	-5513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCCAAAGAAATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	42171864	42174389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42172004_42172539_42172629_42174243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013569	chr19	+	466	5	ISM	ENSMUSG00000018820.14	ENST00000370610.7	1030	9	4828	0	4828	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCTGATCTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	42172554	42179902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42172629_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013570	chr19	+	1121	1	ISM	ENSMUSG00000018820.14	ENSMUST00000169536.8	5611	13	20031	2872	11310	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTCAGGTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	42179036	42180157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42179000_42180200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013571	chr19	+	1207	4	ISM	ENSMUSG00000042532.15	ENSMUST00000087123.6	2823	5	7595	1166	14	-1166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGTGTGCGCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	42251772	42257621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42251894_42255189_42255343_42255415_42255518_42256790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013572	chr19	+	941	3	ISM	ENSMUSG00000042532.15	ENST00000596005.2	1259	5	3687	0	3687	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGGGGCACATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	42255445	42442127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_42255518_42256790_42257621_42442088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013573	chr19	-	638	2	ISM	ENSMUSG00000025188.16	ENSMUST00000026194.15	2647	19	22340	13	21956	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTGTCATTATTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	42744746	42743647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_42744236_42744696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013574	chr19	-	1421	3	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	206790	-5	206790	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGACTTAAAGCCCACGC	NA	NA	NA	NA	NA	NA	NA	NA	42794882	42776187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_42776237_42776333_42777552_42794728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013575	chr19	-	1510	3	NNC	ENSMUSG00000074852.5	novel	2280	10	NA	NA	200208	-141	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCAGTTCCACCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	42801464	42776333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_42777547_42794724_42794876_42801318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013576	chr19	-	1615	5	ISM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	100065	224	100065	-224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGTCACTGCAGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	42901607	42776416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_42777552_42794728_42794876_42801318_42801465_42897057_42897173_42901535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013577	chr19	-	1356	5	ISM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	17594	0	17594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	43495450	43488190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013578	chr19	+	395	2	ISM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	32073	8260	32073	-8260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGAGTTCTATGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	43710183	43713876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_43710355_43713652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013579	chr19	-	909	7	ISM	ENSMUSG00000040018.10	ENST00000649102.1	942	8	5	33113	5	-4783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACAGCCCTGCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	43739945	43726475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735279_43737228_43737352_43739782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013580	chr19	-	149	1	ISM	ENSMUSG00000025195.10	ENSMUST00000212396.2	6100	16	92121	1101	26953	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTGGGTGGACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	43836509	43836360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43836400_43836500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013581	chr19	-	210	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	25105	290	25105	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGGATCCATGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43838357	43836650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43836718_43838214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013582	chr19	-	259	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	22683	2263	22683	-2218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCCTTGACCTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	43840779	43838623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43838766_43840662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013583	chr19	-	248	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	20759	4385	20759	-4340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGGAAGGCGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	43842703	43840745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43840862_43842571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013584	chr19	-	192	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	20200	6226	20200	-6181	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTCTGGGCATGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	43843262	43842586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43842752_43843235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013585	chr19	-	204	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	18412	7114	18412	-7069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCTGGACTTCTACAAC	NA	NA	NA	NA	NA	NA	NA	NA	43845050	43843474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43843569_43844940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013586	chr19	-	224	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	8340	8580	8340	-8535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACATTGTCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	43855122	43844940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43845070_43855027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013587	chr19	-	177	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	7407	18685	7407	-18640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCCAGCATATACGGGT	NA	NA	NA	NA	NA	NA	NA	NA	43856055	43855045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43855133_43855965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013588	chr19	-	189	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	6115	19651	6115	-19606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGTTAGCAGCCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	43857347	43856011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43856097_43857243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013589	chr19	-	188	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	763	22303	763	-22258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGTATGAGAAGGACG	NA	NA	NA	NA	NA	NA	NA	NA	43862699	43858663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43858749_43862596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013590	chr19	-	244	2	ISM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	51	26238	51	-26193	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGAGCTCATGCGATT	NA	NA	NA	NA	NA	NA	NA	NA	43863411	43862598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_43862697_43863265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013591	chr19	-	1527	1	Genic_Genomic	ENSMUSG00000025198.17	novel	NA	NA	NA	NA	33057	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44024908	44023381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_44023400_44024900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013592	chr19	-	548	2	NNC	ENSMUSG00000057506.6	novel	778	4	NA	NA	4237	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44130645	44127684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_44128150_44130562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013593	chr19	-	812	4	ISM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	387	-13	384	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTGGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44134498	44127684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013594	chr19	+	5455	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44282112	44295303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013595	chr19	-	4454	5	ISM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	1003	0	1003	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44395145	44382893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013596	chr19	-	601	1	Genic_Genomic	ENSMUSG00000025204.11	novel	NA	NA	NA	NA	6241	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCTGGATTTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	44537610	44537009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_44537000_44537600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013597	chr19	-	581	2	ISM	ENSMUSG00000025204.11	ENSMUST00000171415.8	2142	5	2573	1224	2559	444	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCCTATAATCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44541292	44538234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_44538660_44541136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013598	chr19	-	560	4	ISM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	381	-2	353	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCTTTCTCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44543498	44538676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013599	chr19	-	306	2	NNC	ENSMUSG00000025204.11	novel	680	5	NA	NA	2586	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCTTTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44541265	44538678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_44538852_44541132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013600	chr19	-	327	2	NNC	ENSMUSG00000025204.11	novel	680	5	NA	NA	2558	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCTTTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44541293	44538678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_44538852_44541139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013601	chr19	-	174	1	NIC	ENSMUSG00000025204.11	novel	680	5	NA	NA	4999	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCTTTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44538852	44538678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_44538700_44538900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013602	chr19	-	711	5	FSM	ENSMUSG00000025204.11	ENST00000370320.4	682	5	-28	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTCTGTCTTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44543879	44538874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_44539079_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013603	chr19	+	216	1	ISM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	13209	0	13209	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATGTGACTTATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	44564497	44564713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_44564500_44564700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013604	chr19	+	2383	5	ISM	ENSMUSG00000004231.16	ENSMUST00000004340.11	3095	11	58545	-1	58545	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGAGTCCTAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44804377	44826311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013605	chr19	+	718	5	ISM	ENSMUSG00000025207.17	ENST00000517724.5	2588	14	5018	4309	-4842	-4309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTCAGGGAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44985776	44987171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013606	chr19	+	962	4	ISM	ENSMUSG00000025207.17	ENST00000210633.3	3984	14	6208	1625	-3514	-1270	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCACCCCCACCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	44987104	44990210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_44987226_44987316_44987492_44987617_44987680_44989606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013607	chr19	+	254	2	FSM	ENSMUSG00000025207.17	ENST00000613292.1	1087	2	13	820	13	-467	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGCTATCTCTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	44990631	44991013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_44990658_44990785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013608	chr19	+	628	1	ISM	ENSMUSG00000025207.17	ENSMUST00000026225.15	4548	15	13669	0	590	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGAGTGTCTGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44991208	44991836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_44991200_44991800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013609	chr19	-	154	1	ISM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	1460	0	1460	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGACAGTGTAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	44993421	44993267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_44993300_44993400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013610	chr19	-	227	2	ISM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	268	997	268	-997	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCACACGGACAACCCGA	NA	NA	NA	NA	NA	NA	NA	NA	44994613	44994264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_44994380_44994501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013611	chr19	-	258	2	ISM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	7	1255	7	-1255	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAATAGTGGCCGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	44994874	44994522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_44994609_44994702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013612	chr19	+	637	4	FSM	ENSMUSG00000025209.6	ENST00000476766.5	634	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTCAAGAAGATCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	44997776	45000197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_44997960_44998570_44998679_44998856_44999028_45000022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013613	chr19	+	628	4	NNC	ENSMUSG00000025209.6	novel	634	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGACTCAAGAAGATCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44997782	45000196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_44997960_44998570_44998679_44998856_44999026_45000022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013614	chr19	+	1305	2	ISM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	3874	2	1092	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGCGTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44998870	45001199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_44998999_45000022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013615	chr19	+	920	2	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	3173	3093	3173	-3021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGGCAGTGGTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	45009823	45012448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45010276_45011980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013616	chr19	+	831	2	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	5392	2154	5392	-2082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGCCACGGCTGGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45012042	45013387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45012644_45013157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013617	chr19	+	708	2	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	6511	850	6511	-778	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGCTTTGAGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45013161	45014691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45013419_45014240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013618	chr19	+	620	1	ISM	ENSMUSG00000035342.15	ENSMUST00000179108.9	2798	5	11292	0	8280	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCCATCTCTGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45014930	45015550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45014900_45015600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013619	chr19	+	336	2	ISM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	46	7114	46	-6818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCTGCCTCAAATCACG	NA	NA	NA	NA	NA	NA	NA	NA	45036158	45037707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45036330_45037542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013620	chr19	+	336	2	ISM	ENSMUSG00000025212.18	ENSMUST00000084493.8	2318	10	1300	6171	1300	-6171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCTTATCCTGTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	45037542	45038354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45037707_45038182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013621	chr19	+	322	3	ISM	ENSMUSG00000025212.18	ENSMUST00000084493.8	2318	10	5864	1260	5864	-1260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCAGCAACCTTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	45042106	45043265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45042159_45042740_45042789_45043043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013622	chr19	+	299	1	ISM	ENSMUSG00000025212.18	ENSMUST00000111954.11	2867	10	8509	0	8281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTTCAGTTATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45044523	45044822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45044500_45044800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013623	chr19	+	1379	5	FSM	ENSMUSG00000025213.12	ENSMUST00000026234.5	1380	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACTGCTGCGGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	45064578	45067728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_45064676_45065102_45065653_45066734_45066896_45066999_45067148_45067305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013624	chr19	+	718	3	ISM	ENSMUSG00000025213.12	ENSMUST00000111948.8	1625	6	954	891	56	-891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAGATGGCTTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	45064633	45066837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45064676_45065079_45065653_45066734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013625	chr19	+	1140	3	FSM	ENSMUSG00000025215.11	ENST00000467928.2	1714	3	335	239	335	-68	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGAATCCTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	45139453	45144770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_45139932_45141954_45142157_45144310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013626	chr19	+	508	1	ISM	ENSMUSG00000025215.11	ENSMUST00000026236.11	2065	3	5388	368	4599	5	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCACACACAGGATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	45144506	45145014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45144500_45145000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013627	chr19	+	848	4	ISM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	11298	303	11298	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAGTTTAAACATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	45560351	45566423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_45560449_45560843_45560978_45565431_45565535_45565909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013628	chr19	+	521	1	Genic_Genomic	ENSMUSG00000041035.10	novel	NA	NA	NA	NA	17157	5	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGCATGTTTCCCATAG	NA	NA	NA	NA	NA	NA	NA	NA	45566210	45566731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_45566200_45566700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013629	chr19	-	245	2	ISM	ENSMUSG00000040913.12	ENSMUST00000046869.11	2068	9	23862	57557	-5312	-57016	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGAGCAGGAGGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	45624889	45624249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_45624307_45624701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013630	chr19	-	436	2	ISM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	1310	0	1310	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGCTTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	45736720	45736172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_45736491_45736602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013631	chr19	+	588	1	Genic_Genomic	ENSMUSG00000087367.2	novel	NA	NA	NA	NA	2219	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATCATATAGATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	45740165	45740753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_45740200_45740800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013632	chr19	+	1183	1	FSM	ENSMUSG00000074811.4	ENSMUST00000099393.4	2666	1	1483	0	1483	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCGTGTTAAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45993429	45994612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_45993400_45994600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013633	chr19	+	171	2	ISM	ENSMUSG00000015176.12	ENST00000488254.6	2381	13	2678	5464	2678	-5464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCCCAGGGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	46067141	46067426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46067198_46067311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013634	chr19	+	172	2	ISM	ENSMUSG00000015176.12	ENST00000488254.6	2381	13	2844	5302	2844	-5302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCCTCAGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	46067307	46067588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46067461_46067569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013635	chr19	+	171	2	ISM	ENSMUSG00000015176.12	ENSMUST00000235620.2	2441	13	3994	3090	3958	-3080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCGATGACTCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	46068421	46069810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46068525_46069742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013636	chr19	+	1440	5	ISM	ENSMUSG00000015176.12	ENST00000605788.6	2461	13	6507	0	6490	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGGCAAAGCAAAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	46070953	46072956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46071066_46071178_46071807_46071964_46072066_46072189_46072283_46072450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013637	chr19	+	968	4	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	7026	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTGTGATTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	46071489	46072901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_46071807_46071958_46072066_46072189_46072283_46072450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013638	chr19	+	424	1	ISM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	9137	0	9082	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCAGAGTTATGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	46073545	46073969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46073500_46074000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013639	chr19	-	1378	4	FSM	ENSMUSG00000025229.16	ENSMUST00000026259.16	1380	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGATGATTCAGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	46136763	46124123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_46125045_46125421_46125625_46125803_46125934_46136639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013640	chr19	+	671	4	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	108219	20767	108208	-20767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTACCCAGTGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	46249187	46254166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46249318_46250059_46250272_46253616_46253805_46254025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013641	chr19	+	711	4	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	126740	5820	126729	-5820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATGAAGAGGAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	46267708	46269113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46267875_46268350_46268512_46268615_46268863_46268976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013642	chr19	+	960	3	ISM	ENSMUSG00000025224.17	ENST00000678351.1	6117	38	131719	186	131708	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTATCCAGTCCCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	46272687	46274747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46272870_46273143_46273273_46274098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013643	chr19	+	728	1	ISM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	133270	4	133238	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTCCTTCCCGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	46274217	46274945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46274200_46274900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013644	chr19	-	490	1	ISM	ENSMUSG00000118087.2	ENSMUST00000235942.2	1764	2	1531	0	1525	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGAAAATGACATTTCG	NA	NA	NA	NA	NA	NA	NA	NA	46292519	46292029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46292000_46292500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013645	chr19	+	300	2	ISM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	2887	1970	2887	-1970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATATTGCACATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	46298093	46298466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46298209_46298281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013646	chr19	+	350	2	ISM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	3105	1624	3105	-1624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTAGGAATGAGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	46298311	46298812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46298496_46298646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013647	chr19	+	1244	5	FSM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	0	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGGTGCATAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	46316625	46318885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_46316741_46316841_46316966_46317113_46317268_46317526_46318033_46318540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013648	chr19	+	516	3	ISM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	31	1309	28	-1308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGCTGCAGGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	46316653	46317576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46316966_46317113_46317268_46317526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013649	chr19	-	892	1	Genic_Genomic	ENSMUSG00000036748.17	novel	NA	NA	NA	NA	7908	3	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTCCCAAGTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46319139	46318247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_46318200_46319100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013650	chr19	-	1290	4	ISM	ENSMUSG00000036748.17	ENSMUST00000235485.2	1790	9	7189	-2	7177	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTCCCAAGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	46319870	46318248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013651	chr19	+	349	1	NIC	ENSMUSG00000025226.12	novel	1348	4	NA	NA	1911	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGGTGCATAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	46318536	46318885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_46318500_46318900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013652	chr19	-	558	5	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	5906	784	5906	-782	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGAGGGGCCTCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	46321141	46319766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013653	chr19	+	421	3	FSM	ENSMUSG00000025227.15	ENST00000369931.3	422	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATCTTTCCTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	46354781	46356831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_46354993_46355648_46355732_46356704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013654	chr19	+	132	1	NIC	ENSMUSG00000025227.15	novel	2223	9	NA	NA	1920	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATCTTTCCTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	46356699	46356831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_46356700_46356800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013655	chr19	-	1052	1	Genic_Genomic	ENSMUSG00000025228.6	novel	NA	NA	NA	NA	17879	3	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACCTCTTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	46366298	46365246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_46365200_46366300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013656	chr19	-	1341	5	ISM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	15406	689	15397	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGATGGAGAACTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	46368780	46365938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013657	chr19	-	604	5	ISM	ENSMUSG00000025228.6	ENSMUST00000237742.2	2683	10	10668	3450	10668	-3450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCACCATTGAGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	46373509	46368702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013658	chr19	+	452	2	ISM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	12917	1457	12917	-1457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCGCAAGATTCTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	46503057	46503830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46503177_46503497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013659	chr19	+	375	1	Genic_Genomic	ENSMUSG00000025034.10	novel	NA	NA	NA	NA	14774	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCCAATGGGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	46504914	46505289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_46504900_46505300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013660	chr19	-	565	4	ISM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	21484	0	21484	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAATGTCTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	46540048	46519534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013661	chr19	+	235	1	Genic_Genomic	ENSMUSG00000025036.8	novel	NA	NA	NA	NA	23295	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACACTGTCTGCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	46585100	46585335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_46585100_46585300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013662	chr19	+	1518	2	ISM	ENSMUSG00000047731.18	ENSMUST00000111855.5	3865	4	29170	1968	29170	-1965	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGCTTCTCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	46641009	46643856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46641075_46642403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013663	chr19	+	1504	1	ISM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	56795	7	32478	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAATCTCCTGCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	46644317	46645821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46644300_46645800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013664	chr19	-	1483	7	FSM	ENSMUSG00000003555.9	ENST00000638971.1	1484	7	5	-4	5	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAACGTCCCGGATCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	46661320	46655755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_46656048_46656452_46656557_46657110_46657281_46657584_46657801_46658976_46659207_46659395_46659532_46660985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013665	chr19	-	634	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	2117	160	2117	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTGCAGAGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	46659208	46655919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46656048_46656452_46656557_46657110_46657281_46658976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013666	chr19	-	574	4	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	1788	765	1788	-765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGATCATCAATCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	46659537	46656524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46656557_46657110_46657281_46658976_46659207_46659395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013667	chr19	-	426	3	ISM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	295	3202	295	-3202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCGACAGTGTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	46661030	46658961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46659207_46659395_46659532_46660985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013668	chr19	+	587	2	NNC	ENSMUSG00000062376.8	novel	2176	5	NA	NA	9843	-1334	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTAGCTTGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	46688187	46690487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_46688241_46689953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013669	chr19	+	581	1	Genic_Genomic	ENSMUSG00000062376.8	novel	NA	NA	NA	NA	12900	4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGACCAATCATTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	46691244	46691825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_46691200_46691800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013670	chr19	+	1233	2	ISM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	670	24349	670	-24349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAATCTTGGATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	46750712	46842452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_46751833_46842339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013671	chr19	-	849	1	ISM	ENSMUSG00000025041.18	ENSMUST00000235234.2	7353	18	81891	3512	49928	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAAGTCTGAATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	46876116	46875267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46875300_46876100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013672	chr19	-	782	1	NIC	ENSMUSG00000025041.18	novel	7353	18	NA	NA	48553	3	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCATTCGGTGCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	46877491	46876709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_46876700_46877500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013673	chr19	-	864	3	ISM	ENSMUSG00000025041.18	ENST00000675645.1	2161	18	72209	0	47479	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46878565	46876712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46877491_46878208_46878237_46878507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013674	chr19	-	807	2	NNC	ENSMUSG00000025041.18	novel	2440	17	NA	NA	47476	-55	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTCCTTCCGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	46878568	46876767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_46877514_46878507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013675	chr19	-	890	2	ISM	ENSMUSG00000025041.18	ENST00000675985.1	2440	17	47657	67	47657	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGTTGAGGTCAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46878387	46876779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_46877491_46878208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013676	chr19	-	214	1	ISM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	17074	0	17074	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	NA	NA	NA	NA	NA	NA	NA	47022269	47022055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_47022100_47022300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013677	chr19	-	368	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	-1	-5	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTTTATTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	47079083	47071901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013678	chr19	-	852	3	ISM	ENSMUSG00000042694.18	ENST00000224950.8	2036	9	25931	368	25931	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTCCTTATGACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	47498865	47489469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_47490157_47496244_47496318_47498773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013679	chr19	-	688	1	NIC	ENSMUSG00000042694.18	novel	2036	9	NA	NA	34639	2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTCCTTATGACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	47490157	47489469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_-_47489500_47490200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013680	chr19	+	1662	4	FSM	ENSMUSG00000025066.11	ENSMUST00000099353.6	1657	4	1	-6	1	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATCCTTATTTCCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	47720121	47724033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_47720261_47721068_47721428_47721957_47722351_47723262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013681	chr19	+	923	4	ISM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	2888	-2	2888	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCAAACCACCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	47846296	47853231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_47846521_47847870_47847970_47851817_47851922_47852735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013682	chr19	-	2945	1	ISM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	21753	0	21751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGAGTAGAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	47885985	47883040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_47883000_47886000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013683	chr19	-	3055	2	FSM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	8	697	6	-697	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCGCCACATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	47907730	47883737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_47886625_47907562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013684	chr19	-	401	1	ISM	ENSMUSG00000043531.17	ENSMUST00000211687.2	7080	26	527141	3284	101334	29	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAAGTAAACACTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	50139782	50139381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_50139400_50139800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013685	chr19	-	772	4	ISM	ENSMUSG00000043531.17	ENST00000369698.5	2643	19	84057	-23	84057	23	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAATAACAAGTAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	50157059	50139387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_50139790_50141197_50141359_50141491_50141598_50156956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013686	chr19	-	419	3	ISM	ENSMUSG00000043531.17	ENST00000369698.5	2643	19	62469	30457	62469	-28477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACACAAAGACCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	50178647	50169867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_50169964_50171090_50171225_50178458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013687	chr19	-	451	3	ISM	ENSMUSG00000043531.17	ENST00000369698.5	2643	19	41870	31710	41870	-29730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTGGTGGTATGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	50199246	50171120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_50171225_50178458_50178646_50199086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013688	chr19	-	435	4	ISM	ENSMUSG00000043531.17	ENST00000369698.5	2643	19	24410	71147	24410	-69167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTGTGGTAGTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	50216706	50210557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_50210675_50213536_50213668_50215179_50215298_50216637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013689	chr19	+	1609	1	Genic_Genomic	ENSMUSG00000118128.2	novel	NA	NA	NA	NA	3530	7	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAACAGTGTTAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	52295488	52297097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_52295500_52297100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013690	chr19	-	508	1	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	40986	0	40985	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACGGGGAAGGCAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	52979591	52979083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_52979100_52979600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013691	chr19	-	156	2	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	36625	1012	36624	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGCCAGGGCCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	52983952	52980095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_52980151_52983851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013692	chr19	-	185	2	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	34201	6308	34200	-5766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCATCAGTTATAAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	52986376	52985391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_52985505_52986304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013693	chr19	-	169	3	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	31686	7255	31685	-6713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGCAGCTGTTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	52988891	52986338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_52986375_52987582_52987644_52988819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013694	chr19	-	170	2	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	25905	14118	25904	-13576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCACGTGAGTCGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	52994672	52993201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_52993285_52994585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013695	chr19	-	173	2	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	24194	15622	24193	-15080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGCCATACAAGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	52996383	52994705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_52994797_52996301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013696	chr19	-	196	2	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	20282	19414	20281	-18872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACTCCGGTTCCACGG	NA	NA	NA	NA	NA	NA	NA	NA	53000295	52998497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_52998595_53000196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013697	chr19	-	211	2	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	19892	21112	19891	-20570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCCATAGCTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	53000685	53000195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_53000341_53000619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013698	chr19	-	169	2	ISM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	6777	23964	6776	-23422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGGTGAGTCACTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	53013800	53003047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_53003106_53013689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013699	chr19	-	1177	1	Genic_Genomic	ENSMUSG00000025024.8	novel	NA	NA	NA	NA	9470	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGTGTGTTAACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	53369002	53367825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_53367800_53369000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013700	chr19	-	1499	3	ISM	ENSMUSG00000025024.8	ENSMUST00000237529.2	1480	6	6323	-461	6323	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATAAAGTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	53372149	53367849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_53369033_53369671_53369826_53371987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013701	chr19	+	1165	2	ISM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	8428	491	8428	-491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTCTTGCTCACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	53525967	53530371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_53526108_53529346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013702	chr19	+	1154	1	ISM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	12169	0	12169	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATCCTGTTAGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	53529708	53530862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_53529700_53530900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013703	chr19	-	286	1	FSM	ENSMUSG00000071497.5	ENSMUST00000095978.5	901	1	650	-35	650	35	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAAAGTGTGGATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	53576849	53576563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_53576600_53576800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013704	chr19	-	319	1	FSM	ENSMUSG00000071497.5	ENSMUST00000095978.5	901	1	137	445	137	-445	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCTGACCTCCTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	53577362	53577043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_53577000_53577400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013705	chr19	+	468	3	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	22687	20671	22687	-20671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAAAATTTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	53611515	53613593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_53611648_53611897_53612020_53613379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013706	chr19	+	441	3	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	23068	17879	23068	-17879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAGACTAAGATATGT	NA	NA	NA	NA	NA	NA	NA	NA	53611896	53616385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_53612020_53613379_53613594_53616281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013707	chr19	+	521	3	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	40498	4115	40498	-4115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCCTTTATATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	53629326	53630149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_53629441_53629528_53629742_53629955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013708	chr19	+	529	2	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	43477	674	43477	-674	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCAGTTACTAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	53632305	53633590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_53632382_53633137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013709	chr19	+	499	1	ISM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	44937	0	44937	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTGTGTAATTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	53633765	53634264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_53633800_53634300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013710	chr19	-	2052	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	2	-11	2	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTCACATGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	53933056	53918280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013711	chr19	-	152	1	Genic_Genomic	ENSMUSG00000024982.11	novel	NA	NA	NA	NA	21532	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCAGACTTAATTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	55281575	55281423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_55281400_55281600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013712	chr19	-	146	2	ISM	ENSMUSG00000024982.11	ENST00000683505.1	2077	10	12070	733	12070	-733	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTCCCCATGGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55291037	55282157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_55282256_55290989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013713	chr19	-	959	5	ISM	ENSMUSG00000024982.11	ENST00000682055.1	1877	10	10135	-28	10135	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTTTTTAGTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55292972	55286727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013714	chr19	-	285	3	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	6116	3674	4803	-3674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTTCCTGAAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	55298304	55292908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_55293010_55297335_55297390_55298174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013715	chr19	-	875	4	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	1214	8953	-99	-8953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTCATACAGGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55303206	55298187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_55298337_55300056_55300217_55301620_55301713_55302732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013716	chr19	-	918	4	ISM	ENSMUSG00000024982.11	ENSMUST00000224291.2	2603	11	-31	10852	11	-10852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAATGTACACACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	55304451	55300086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_55300217_55301620_55301713_55302732_55303205_55304227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013717	chr19	+	624	3	ISM	ENSMUSG00000024983.11	ENSMUST00000225529.2	1244	8	182253	0	182197	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGGCCCCTTTCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	55486979	55565433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_55487014_55487674_55487737_55564905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013718	chr19	+	531	1	NIC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	260120	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGGCCCCTTTCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	55564902	55565433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_55564900_55565400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013719	chr19	+	640	4	ISM	ENSMUSG00000024985.21	ENST00000355717.9	2000	13	176830	0	23476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCCTCGTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	55907417	55920289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_55907477_55907942_55908051_55912327_55912377_55919865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013720	chr19	+	929	2	ISM	ENSMUSG00000024985.21	ENSMUST00000111657.11	2135	14	183632	-91	30464	77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCACTTTACACCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	55914405	55920718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_55914482_55919865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013721	chr19	+	901	1	Genic_Genomic	ENSMUSG00000024985.21	novel	NA	NA	NA	NA	37249	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGCCGCTTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55921190	55922091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_55921200_55922100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013722	chr19	+	640	1	ISM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	44576	0	44576	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTGGTCCGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	56430136	56430776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_56430100_56430800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013723	chr19	-	1940	2	ISM	ENSMUSG00000025077.14	ENSMUST00000182276.2	4066	10	580	15544	580	-15544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTACAAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	56536074	56533144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_56534079_56535068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013724	chr19	-	1855	1	ISM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	32855	0	24348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGTTGATGGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	56777767	56775912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_56775900_56777800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013725	chr19	-	969	2	FSM	ENSMUSG00000035173.15	ENST00000369285.7	962	2	-6	-1	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACTGTTAAACAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	56810618	56801440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_56802211_56810419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013726	chr19	-	961	2	NNC	ENSMUSG00000035173.15	novel	962	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCACTGTTAAACAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	56810612	56801441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_56802206_56810415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013727	chr19	-	955	2	NNC	ENSMUSG00000035173.15	novel	962	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCACTGTTAAACAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	56810610	56801441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_56802206_56810419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013728	chr19	-	963	2	NNC	ENSMUSG00000035173.15	novel	962	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCACTGTTAAACAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	56810609	56801441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_-_56802211_56810415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013729	chr19	+	282	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	2	11346	2	-11346	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTCCGTTTTCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	56882199	56886479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_56882308_56886305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013730	chr19	+	326	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	4108	7732	4108	-7732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACTCACCAGCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	56886305	56890093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_56886498_56889959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013731	chr19	+	270	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	7759	7025	7759	-7025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCCACAGGGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	56889956	56890800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_56890094_56890667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013732	chr19	+	304	3	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	8467	3803	8467	-3803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTTGGGATTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	56890664	56894022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_56890801_56891898_56891955_56893910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013733	chr19	+	357	3	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	9699	2817	9699	-2817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTCGGGGAGTACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	56891896	56895008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_56891955_56893910_56894023_56894821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013734	chr19	+	389	2	ISM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	12995	375	12995	-375	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATCCCACCCGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	56895192	56897450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_56895395_56897263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013735	chr19	+	226	1	NIC	ENSMUSG00000025082.9	novel	4049	14	NA	NA	15413	11	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTAGGGCCCTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	56897610	56897836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_56897600_56897800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013736	chr19	-	861	1	ISM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	94977	0	94977	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGGTTTCCCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	56901653	56900792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_56900800_56901700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013737	chr19	-	3108	1	ISM	ENSMUSG00000025085.17	ENSMUST00000079360.12	7152	26	179651	541	82532	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	57024813	57021705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_57021700_57024800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013738	chr19	+	418	3	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	0	9078	0	-9078	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGTCCAGCCTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	58748782	58750816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_58748940_58749997_58750124_58750681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013739	chr19	+	248	2	NNC	ENSMUSG00000025091.5	novel	1014	8	NA	NA	1221	-9078	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGTCCAGCCTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	58750003	58750816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_58750117_58750681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013740	chr19	+	293	3	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	1297	8020	1297	-8020	internal_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCATGGGAGCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	58750079	58751874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_58750124_58750681_58750817_58751760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013741	chr19	+	204	2	NNC	ENSMUSG00000025091.5	novel	1014	8	NA	NA	1915	-8045	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCATGTGGGCAGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	58750697	58751849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_58750817_58751764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013742	chr19	+	290	3	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	1978	6613	1978	-6613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCTACACCCACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58750760	58753281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_58750817_58751760_58751873_58753159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013743	chr19	+	304	3	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	3040	5067	3040	-5067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGTGTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58751822	58754827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_58751873_58753159_58753280_58754693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013744	chr19	+	365	3	ISM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	4367	2780	4367	-2780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACTCCAGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	58753149	58757114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_58753280_58754693_58754828_58757013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013745	chr19	+	227	2	NNC	ENSMUSG00000025091.5	novel	1014	8	NA	NA	5921	-2780	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACTCCAGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	58754703	58757114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_58754830_58757013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013746	chr19	+	177	2	NNC	ENSMUSG00000025091.5	novel	1014	8	NA	NA	5928	-2817	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTACCCCTGTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	58754710	58757077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_58754824_58757013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013747	chr19	+	189	2	NNC	ENSMUSG00000025091.5	novel	1014	8	NA	NA	5955	-2780	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTACTCCAGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	58754737	58757114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr19_+_58754826_58757013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013748	chr19	+	284	3	ISM	ENSMUSG00000025091.5	ENST00000611850.4	1018	8	5994	1	5994	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCCATTTTACTTACC	NA	NA	NA	NA	NA	NA	NA	NA	58754776	58759897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_58754828_58757013_58757115_58759765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013749	chr19	+	145	1	NIC	ENSMUSG00000025091.5	novel	1572	12	NA	NA	10972	1	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCATTTTACTTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	58759754	58759899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr19_+_58759800_58759900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013750	chr19	+	553	1	ISM	ENSMUSG00000025094.9	ENSMUST00000026084.5	3785	16	34564	0	34564	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGCCTGGCTGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	59283891	59284444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_59283900_59284400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013751	chr19	-	3064	1	ISM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	45539	0	45539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATATCTTCATTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	59288673	59285609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_59285600_59288700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013752	chr19	+	493	1	FSM	ENSMUSG00000067038.7	ENSMUST00000086764.7	396	1	-65	-32	-65	32	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCCAGATCACAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	59310737	59311230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_59310700_59311200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013753	chr19	+	2651	2	FSM	ENSMUSG00000043969.5	ENST00000442245.5	2650	2	0	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGTTGTCTTGGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59446883	59453789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_+_59448057_59452311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013754	chr19	-	775	1	Genic_Genomic	ENSMUSG00000057858.9	novel	NA	NA	NA	NA	21937	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGGAAGTCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	60187791	60187016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_60187000_60187800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013755	chr19	-	1032	4	ISM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	6555	170	1154	-170	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAGGAAATGGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	60208574	60187187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013756	chr19	-	542	5	FSM	ENSMUSG00000057858.9	ENST00000554513.1	586	5	44	0	44	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGCAGAGTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	60209684	60187869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr19_-_60187920_60188401_60188509_60201104_60201191_60208471_60208572_60209485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013757	chr19	-	783	3	ISM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	23	21903	12	-21051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATTTTTAAATTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	60215106	60208920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60209010_60209485_60209737_60214663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013758	chr19	-	983	1	ISM	ENSMUSG00000024991.9	ENST00000369144.8	5160	23	28559	526	28544	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	60750537	60749554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60749600_60750500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013759	chr19	-	178	2	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	27482	1107	27482	-1107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTCAAGAGATCGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	60751599	60750661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60750743_60751502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013760	chr19	-	148	2	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	22977	5823	22977	-5823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGGCGCTTGGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	60756104	60755377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60755434_60756012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013761	chr19	-	166	2	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	20718	7670	20718	-7670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAGCTGGAAATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	60758363	60757224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60757331_60758303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013762	chr19	-	179	2	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	14806	14183	14806	-14183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACAGGTAAAAGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	60764275	60763737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60763830_60764188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013763	chr19	-	166	2	ISM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	13889	14702	13889	-14702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGACCTTTACAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	60765192	60764256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60764294_60765063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013764	chr19	+	1007	3	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	19173	601	19173	-601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCTTTGGAAAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	60819221	60824064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_+_60819333_60821021_60821117_60823263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013765	chr19	+	814	1	Genic_Genomic	ENSMUSG00000024993.16	novel	NA	NA	NA	NA	23811	8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGATGTCTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	60823859	60824673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_+_60823900_60824700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013766	chr19	-	369	1	Genic_Genomic	ENSMUSG00000024997.8	novel	NA	NA	NA	NA	10138	1	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCACCGTTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	60852856	60852487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr19_-_60852500_60852900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013767	chr19	-	609	3	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	6935	332	6935	-332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCCTTAGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	60856059	60852820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60853158_60853603_60853770_60855953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013768	chr19	-	407	3	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	4416	1115	4416	-1115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTGTTTTCCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	60858578	60853603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60853770_60855953_60856058_60858441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013769	chr19	-	523	4	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	1288	3465	1288	-3465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCTGTTCTTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	60861706	60855953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60856058_60858441_60858578_60859857_60860000_60861565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013770	chr19	-	401	3	ISM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	2	7369	2	-7369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGATTTTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	60862992	60859857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr19_-_60860000_60861565_60861702_60862869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013771	chr2	+	763	1	ISM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	108662	0	108359	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	3228080	3228843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3228100_3228800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013772	chr2	-	643	1	Genic_Genomic	ENSMUSG00000049950.7	novel	NA	NA	NA	NA	3053	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGATCCTGCATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3330627	3329984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_3330000_3330600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013773	chr2	-	705	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	8	329	8	-329	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTTAAACGTGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	3333672	3330314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_3330911_3333563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013774	chr2	-	278	1	NIC	ENSMUSG00000026650.16	novel	643	4	NA	NA	9257	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGTCCAGTTATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	3410361	3410083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_3410100_3410400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013775	chr2	+	418	4	ISM	ENSMUSG00000026648.19	ENST00000378249.5	1710	10	3	12944	3	-12944	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGGGAAACACCCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	3438026	3441897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3438128_3438712_3438786_3438988_3439130_3441794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013776	chr2	+	457	4	ISM	ENSMUSG00000026648.19	ENST00000378249.5	1710	10	686	10013	686	-10013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCATCGCCCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3438709	3444828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3438786_3438988_3439130_3441794_3441897_3444690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013777	chr2	+	461	5	ISM	ENSMUSG00000026648.19	ENST00000378249.5	1710	10	965	6705	965	-6705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTGAATGTGTATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	3438988	3448136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013778	chr2	+	802	5	ISM	ENSMUSG00000026648.19	ENST00000378249.5	1710	10	6665	533	6665	-533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGCTCTGCAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	3444688	3454308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013779	chr2	+	962	3	ISM	ENSMUSG00000026648.19	ENST00000378249.5	1710	10	13339	0	13339	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAACAAATAAAACTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	3451362	3454841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3451411_3453884_3454302_3454344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013780	chr2	+	526	1	ISM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	29149	268	16312	20	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGAAACCCTGTCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	3454335	3454861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3454300_3454900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013781	chr2	-	619	1	ISM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	18598	0	18527	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTGTTCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	3457470	3456851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_3456900_3457500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013782	chr2	-	642	2	ISM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	2383	8617	2312	-6852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACTCAAGGTGTCGATG	NA	NA	NA	NA	NA	NA	NA	NA	3473685	3465468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_3465964_3473538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013783	chr2	+	504	1	FSM	ENSMUSG00000082580.4	ENSMUST00000122241.2	312	1	-16	-176	-16	176	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGAAGCAACAATCACTA	NA	NA	NA	NA	NA	NA	NA	NA	3551777	3552281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_3551800_3552300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013784	chr2	+	341	1	FSM	ENSMUSG00000081070.2	ENSMUST00000120117.2	1069	1	920	-192	920	192	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACATCTAAGGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	3688318	3688659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_3688300_3688700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013785	chr2	+	527	3	ISM	ENSMUSG00000026655.16	ENST00000496330.5	652	4	-1	1058	-1	-1048	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCTTGAAAAAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	3750231	3779606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3750343_3773752_3774017_3779454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013786	chr2	+	2223	3	ISM	ENSMUSG00000026655.16	ENST00000496330.5	652	4	23565	-1726	-1185	-789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCTATGCATACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	3773797	3782390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3774017_3779454_3779606_3780537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013787	chr2	+	1930	1	ISM	ENSMUSG00000026655.16	ENSMUST00000226435.2	3602	5	209725	0	6267	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTTTGTCTCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3781249	3783179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_3781200_3783200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013788	chr2	-	524	5	FSM	ENSMUSG00000039449.15	ENST00000601460.5	531	5	9	-2	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATGTGGTGGGGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4642021	4610862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_4610955_4638243_4638400_4640441_4640514_4640638_4640780_4641958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013789	chr2	-	2411	1	ISM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	27618	0	12751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGCTGCTTGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	4629279	4626868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_4626900_4629300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013790	chr2	-	2384	2	ISM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	18496	243	3629	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCTACATAGAAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4638401	4627111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_4629338_4638243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013791	chr2	+	493	1	FSM	ENSMUSG00000083378.4	ENSMUST00000118297.2	379	1	-11	-103	-11	103	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAGGAGCCTCACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	4705037	4705530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_4705000_4705500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013792	chr2	+	951	4	ISM	ENSMUSG00000048186.15	ENST00000378605.3	1132	6	10	33280	10	-25630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTGCGTCGTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	4749038	4768114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_4749369_4754346_4754470_4757530_4757803_4767888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013793	chr2	+	385	2	ISM	ENSMUSG00000026662.14	ENST00000378614.8	2363	8	164	23231	164	-22185	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTACACCATCTTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	4886561	4889417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_4886672_4889142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013794	chr2	+	618	5	ISM	ENSMUSG00000026662.14	ENST00000426891.1	950	7	7209	0	7209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATCCAGACAGAGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	4896444	4911602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4911391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013795	chr2	+	382	2	ISM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	23301	1314	21121	32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGATCTATTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4910356	4911634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_4910496_4911391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013796	chr2	+	363	1	ISM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	28631	0	25770	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATGTCTCTGTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	4915005	4915368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_4915000_4915400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013797	chr2	-	470	1	ISM	ENSMUSG00000026669.15	ENSMUST00000102985.8	4867	20	21151	1010	21151	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	4996004	4995534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_4995500_4996000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013798	chr2	-	329	3	ISM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	19643	0	19643	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCAACAGGTATTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	5039873	5037951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_5038036_5038964_5039115_5039778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013799	chr2	-	370	3	ISM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	17933	1011	17933	-1011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGTGCACCTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	5041583	5038962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_5039115_5039778_5039895_5041481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013800	chr2	-	353	3	ISM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	14432	1825	14432	-1825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTCATTTAATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5045084	5039776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_5039895_5041481_5041582_5044949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013801	chr2	-	417	4	ISM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	8592	3549	8592	-3549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAAGGCCAAGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5050924	5041500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_5041582_5044949_5045085_5047257_5047332_5050797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013802	chr2	-	451	3	ISM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	1513	9305	1513	-9305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGATGGGACTCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5058003	5047256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_5047332_5050797_5050951_5057780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013803	chr2	-	494	3	ISM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	1	12891	1	-12891	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGCGGCTCCTCGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	5059515	5050842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_5050951_5057780_5058002_5059350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013804	chr2	-	886	4	ISM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	41189	-3	40947	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTCTGGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	5808786	5799101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013805	chr2	-	591	1	Genic_Genomic	ENSMUSG00000039128.14	novel	NA	NA	NA	NA	50041	3	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTCTGGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	5799692	5799101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_5799100_5799700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013806	chr2	+	1201	2	ISM	ENSMUSG00000025817.13	ENSMUST00000179748.8	1590	10	21318	-497	21318	497	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCTCATTACAGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	5871162	5874044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_5871219_5872899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013807	chr2	+	1197	1	ISM	ENSMUSG00000025817.13	ENSMUST00000026927.10	4764	10	25680	0	25665	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGATAAATAATAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	5875509	5876706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_5875500_5876700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013808	chr2	-	983	1	Genic_Genomic	ENSMUSG00000025816.16	novel	NA	NA	NA	NA	23351	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGTTCTCTAAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	5876779	5875796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_5875800_5876800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013809	chr2	-	485	1	ISM	ENSMUSG00000002107.19	ENSMUST00000002176.13	7718	16	850656	5166	176269	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGAATTGGTTTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	6550155	6549670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_6549700_6550200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013810	chr2	-	841	5	ISM	ENSMUSG00000002107.19	ENST00000631816.1	1803	14	324124	-3	160821	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGCATTCATGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	6565603	6550281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558794_6565481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013811	chr2	-	741	5	ISM	ENSMUSG00000002107.19	ENSMUST00000142941.8	2338	12	135504	831	135504	-737	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGCTCTTATTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	6590920	6551881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_6552025_6554642_6554787_6558595_6558794_6565481_6565602_6590784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013812	chr2	-	521	6	ISM	ENSMUSG00000002107.19	ENSMUST00000142941.8	2338	12	96893	39836	96893	-39742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGCTGCTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	6629531	6590886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013813	chr2	-	394	2	ISM	ENSMUSG00000002107.19	ENSMUST00000142941.8	2338	12	-2	117763	0	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACACGCTGGCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	6726426	6668813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_6669009_6726227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013814	chr2	+	343	2	FSM	ENSMUSG00000103412.2	ENST00000664101.1	972	2	81	548	81	-548	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCCCAAGCTGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6955681	6965467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_6955872_6965314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013815	chr2	+	174	1	ISM	ENSMUSG00000103412.2	ENST00000664101.1	972	2	10241	0	10241	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTCCTCTGCAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	6965841	6966015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_6965800_6966000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013816	chr2	-	3178	6	FSM	ENSMUSG00000015619.11	ENSMUST00000102976.4	3215	6	41	-4	41	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACATTGTATCAACGTGA	NA	NA	NA	NA	NA	NA	NA	NA	9883370	9861884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_9863466_9867905_9868032_9873571_9873718_9879199_9879737_9882162_9882796_9883215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013817	chr2	-	1616	1	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	132429	0	2241	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	9920978	9919362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_9919400_9921000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013818	chr2	-	2221	3	ISM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	2	36776	2	-35250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATGCTGCCGGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	10053405	9956138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_9957757_10047237_10047481_10053045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013819	chr2	-	951	7	ISM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	11685	-5	11685	5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAACTTTCAGAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	10073553	10060821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013820	chr2	+	699	1	ISM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	11484	0	11484	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGACACAGTGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	10096918	10097617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_10096900_10097600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013821	chr2	+	472	2	ISM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	103	10486	103	-10486	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCTGATGCTTGGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	11783404	11784650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_11783714_11784487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013822	chr2	-	923	1	Genic_Genomic	ENSMUSG00000026727.11	novel	NA	NA	NA	NA	146791	6	mono-exon	FALSE	NA	NA	NA	NA	NA	515	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACAAAGCCATGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	13082425	13081502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_13081500_13082400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013823	chr2	-	1362	5	ISM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	51892	-1	5277	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCACCAAACAAAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	13223939	13081507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013824	chr2	-	976	2	NNC	ENSMUSG00000026727.11	novel	720	3	NA	NA	54274	58	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGCTAGGAAGGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	13174942	13081573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_13082419_13174811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013825	chr2	-	681	2	NNC	ENSMUSG00000026727.11	novel	720	3	NA	NA	54274	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTATTATGTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	13174942	13081875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_13082419_13174804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013826	chr2	-	571	5	ISM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	46595	93300	-20	46786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAACTCTGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	13229236	13174808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013827	chr2	-	488	5	ISM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	29225	140073	-17390	13	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGGTTGCTTGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	13246606	13221581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013828	chr2	-	385	4	FSM	ENSMUSG00000026727.11	ENST00000448600.5	389	4	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCAGAGCTTGGTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	13317329	13221593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_13221696_13221995_13222083_13229115_13229283_13317300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013829	chr2	-	350	3	NNC	ENSMUSG00000026727.11	novel	389	4	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCAGAGCTTGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	13229282	13221594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_13221691_13221995_13222083_13229115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013830	chr2	-	101	1	ISM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	54136	140086	7521	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCAGAGCTTGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	13221695	13221594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_13221600_13221700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013831	chr2	-	339	3	NIC	ENSMUSG00000026727.11	novel	389	4	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCAGAGCTTGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	13229270	13221594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_13221696_13221999_13222083_13229115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013832	chr2	-	144	1	FSM	ENSMUSG00000103232.2	ENSMUST00000193081.2	1689	1	1546	-1	1546	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATAATTGTTGGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	13243892	13243748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_13243700_13243900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013833	chr2	-	2866	3	ISM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	27951	0	27951	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCATTGTGAAACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	13521528	13513824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_13516502_13520825_13520956_13521469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013834	chr2	-	2678	1	NIC	ENSMUSG00000026723.11	novel	3788	11	NA	NA	32977	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCATTGTGAAACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	13516502	13513824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_13513800_13516500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013835	chr2	+	1824	8	ISM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	-2	1145	-2	-1144	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGAGATGGACAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	13578760	13586492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013836	chr2	+	1231	4	NNC	ENSMUSG00000026728.10	novel	1777	8	NA	NA	7	-4192	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGATGTGGACGTTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	13578769	13583444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_13579806_13580358_13580413_13583223_13583320_13583399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013837	chr2	+	1491	6	NNC	ENSMUSG00000026728.10	novel	1777	8	NA	NA	33	-2776	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAGAATTTTGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	13578795	13584860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_13579806_13580351_13580417_13583223_13583320_13583399_13583562_13584231_13584358_13584828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013838	chr2	+	1038	3	NNC	ENSMUSG00000026728.10	novel	1777	8	NA	NA	157	-4319	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGTGACACCAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	13578919	13583317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_13579806_13580358_13580417_13583223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013839	chr2	+	1091	7	ISM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	4459	0	4130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	13583221	13587637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013840	chr2	+	1095	7	NNC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	4130	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	13583221	13587637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586514_13587283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013841	chr2	+	292	2	ISM	ENSMUSG00000026728.10	ENSMUST00000193675.2	1777	8	6357	107	6357	-107	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGCTAGAATACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13585448	13587529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_13585495_13587283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013842	chr2	+	237	1	ISM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	8637	1	8308	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTGGTGTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	13587399	13587636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_13587400_13587600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013843	chr2	-	1040	6	FSM	ENSMUSG00000063275.16	ENST00000361271.8	1075	6	31	4	31	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTATAAACTGTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	14060787	14031548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_14031818_14040589_14040769_14045644_14045767_14049593_14049683_14049931_14050067_14060541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013844	chr2	-	140	1	ISM	ENSMUSG00000063275.16	ENST00000361271.8	1075	6	29037	97	29037	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	14031781	14031641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_14031600_14031800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013845	chr2	-	266	3	ISM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	11054	8969	11041	-8898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGCCTCCTATATACCG	NA	NA	NA	NA	NA	NA	NA	NA	14049777	14040610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_14040769_14049593_14049683_14049758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013846	chr2	+	383	4	ISM	ENSMUSG00000026718.18	ENSMUST00000028050.14	3981	13	-15	28329	-15	-28329	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTGCTAGTGAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	14078984	14120847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013847	chr2	+	383	2	ISM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	67736	3077	67645	2192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTCCTCAGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	14146644	14151368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_14146689_14151029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013848	chr2	+	379	1	ISM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	75158	0	75067	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTTTGTTTCTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	14154066	14154445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_14154100_14154400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013849	chr2	+	1735	1	FSM	ENSMUSG00000103475.2	ENSMUST00000195680.2	1844	1	116	-7	116	7	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAAAATCATTATGACT	NA	NA	NA	NA	NA	NA	NA	NA	14350603	14352338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_14350600_14352300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013850	chr2	+	998	5	ISM	ENSMUSG00000057914.16	ENST00000352115.10	1694	12	100398	0	100398	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGCGTGTCCCTACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	14979975	14990887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013851	chr2	-	219	1	ISM	ENSMUSG00000054074.10	ENSMUST00000091420.6	4376	2	3310	1440	2695	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTACACCCCTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	18050552	18050333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_18050300_18050600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013852	chr2	+	738	2	ISM	ENSMUSG00000026743.17	ENSMUST00000114669.2	3865	16	82725	948	82725	468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGTGTTAAAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	18213691	18216249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_18213759_18215578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013853	chr2	-	1441	1	ISM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	177641	0	177622	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTATGTATAATATT	NA	NA	NA	NA	NA	NA	NA	NA	18220000	18218559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_18218600_18220000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013854	chr2	-	1467	2	ISM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	173086	2404	173067	-2404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCATTGAGGGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	18224555	18220963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_18222137_18224261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013855	chr2	+	644	6	ISM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	1700	0	1700	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGGAGTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18678933	18681042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013856	chr2	+	1326	1	ISM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	7793	493	4439	6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGCTCTTTAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	18689621	18690947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_18689600_18690900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013857	chr2	+	508	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	36935	48124	36935	-48124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCATGTCGTTCCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	19243510	19253593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_19243578_19248759_19248829_19249353_19249530_19253397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013858	chr2	+	711	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	42776	27680	42776	-27680	internal_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAAACCAGAGACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	19249351	19274037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_19249530_19253397_19253593_19258666_19258851_19273883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013859	chr2	+	380	3	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	52089	26841	52089	-26841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGAGGGAAGCTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	19258664	19274876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_19258851_19273883_19274037_19274835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013860	chr2	+	515	3	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	67308	10764	67308	-10764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTACGTGGTTCGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	19273883	19290953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_19274037_19274835_19274942_19290697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013861	chr2	+	496	3	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	68259	7943	68259	-7943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGTTCCTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	19274834	19293774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_19274942_19290697_19290948_19293635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013862	chr2	+	508	4	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	87058	482	87058	-482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGACACATTGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	19293633	19301235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_19293773_19297792_19297962_19300199_19300298_19301133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013863	chr2	+	312	3	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	93623	0	93623	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGTAGGAAACTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	19300198	19301717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_19300298_19301133_19301236_19301606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013864	chr2	+	476	2	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	102031	-1	102031	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTACTGTGTAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	19308606	19315040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_19308770_19314727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013865	chr2	+	534	2	ISM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	-113	279643	10	-214574	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAACACACTATCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	20524488	20535053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20524739_20534769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013866	chr2	+	459	2	ISM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	10194	147787	10157	-82718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTTCAAAAGGCAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	20534795	20666909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20535054_20666708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013867	chr2	+	482	3	ISM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	142104	96450	-60730	-31381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGACATGAGGGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	20666705	20718246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20666908_20714215_20714415_20718165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013868	chr2	+	455	2	ISM	ENSMUSG00000036617.18	ENSMUST00000114604.9	4786	18	193562	66068	-9272	-999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAATGAGCATAGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	20718163	20748628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20718260_20748269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013869	chr2	+	541	3	ISM	ENSMUSG00000036617.18	ENSMUST00000114606.8	5284	13	6622	43775	6622	21763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCCAACTCCAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	20748746	20771390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20749103_20765025_20765076_20771255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013870	chr2	+	415	3	ISM	ENSMUSG00000036617.18	ENSMUST00000114606.8	5284	13	29150	29322	29150	-27158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCGACAAGTGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	20771274	20785843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20771423_20782836_20783013_20785752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013871	chr2	+	775	4	ISM	ENSMUSG00000036617.18	ENSMUST00000114606.8	5284	13	40753	24950	40753	-22786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTCAGACCCCAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	20782877	20790215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20783013_20785752_20785884_20786608_20786757_20789854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013872	chr2	+	666	3	ISM	ENSMUSG00000036617.18	ENST00000376452.7	5522	19	265440	12440	47794	-10222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCAGGACTTACCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	20789918	20802779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20790312_20793238_20793423_20802690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013873	chr2	+	428	3	ISM	ENSMUSG00000036617.18	ENST00000376452.7	5522	19	268794	11667	51148	-9449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	20793272	20803552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20793423_20802690_20802843_20803426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013874	chr2	+	416	3	ISM	ENSMUSG00000036617.18	ENSMUST00000114606.8	5284	13	51158	11618	51158	-9454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAGGAAGAAGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	20793282	20803547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20793423_20802687_20802843_20803426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013875	chr2	+	614	4	ISM	ENSMUSG00000036617.18	ENST00000376452.7	5522	19	281952	1328	64306	-805	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCCACCTCCCTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	20806430	20813891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20806473_20810395_20810474_20812712_20812836_20813520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013876	chr2	+	402	1	ISM	ENSMUSG00000036617.18	ENSMUST00000114627.8	7413	22	520095	126	72694	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCACAGGGTTTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	20814818	20815220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_20814800_20815200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013877	chr2	-	495	1	ISM	ENSMUSG00000036591.17	ENSMUST00000154230.9	6972	25	119284	24	34860	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTGCACTGTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	20853248	20852753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_20852800_20853200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013878	chr2	-	2486	6	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	1445	12986	1445	-12986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTATTCCGACTTACC	NA	NA	NA	NA	NA	NA	NA	NA	20886663	20868006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013879	chr2	-	1983	2	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	6	29751	6	-29751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGCATTCAGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	20888102	20884771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_20886663_20888010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013880	chr2	-	694	4	ISM	ENSMUSG00000026679.4	ENSMUST00000027992.3	1199	5	8568	213	-2296	-213	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACTGTTGCAGGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21201608	21185754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_21185930_21193977_21194125_21199085_21199310_21201460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013881	chr2	-	505	4	ISM	ENSMUSG00000026679.4	ENSMUST00000027992.3	1199	5	212	8530	25	-8530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCACAAGAAGAGTATGACA	NA	NA	NA	NA	NA	NA	NA	NA	21209964	21194071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_21194125_21199085_21199310_21201460_21201607_21209882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013882	chr2	+	423	1	Genic_Genomic	ENSMUSG00000048550.18	novel	NA	NA	NA	NA	8814	14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCTAATGTTACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	21219411	21219834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_21219400_21219800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013883	chr2	+	780	1	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	19839	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGGTCCTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	22805445	22806225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_22805400_22806200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013884	chr2	-	1208	1	ISM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	98915	0	98824	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCTTAAAATGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	22831292	22830084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_22830100_22831300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013885	chr2	-	982	2	ISM	ENSMUSG00000058835.15	ENSMUST00000178908.2	2239	11	93458	19	93343	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATACATAAGTGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	22836773	22831263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_22832060_22836587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013886	chr2	+	1203	3	ISM	ENSMUSG00000026781.18	ENST00000677311.1	2555	10	25099	134	24909	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAATAAAATGAAAACGTA	NA	NA	NA	NA	NA	NA	NA	NA	22984371	23003308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_22984530_22989576_22989802_23002488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013887	chr2	+	898	1	ISM	ENSMUSG00000026781.18	ENSMUST00000227663.2	4566	14	44366	1988	43082	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAGGTATCAGAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	23002544	23003442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_23002500_23003400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013888	chr2	-	663	2	ISM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	18982	17635	18830	-15081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGACTATGCCAATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	23027054	23023252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_23023744_23026882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013889	chr2	+	314	1	FSM	ENSMUSG00000084098.2	ENSMUST00000118834.2	504	1	319	-129	319	129	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGGCAAACGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	23125566	23125880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_23125600_23125900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013890	chr2	+	725	1	FSM	ENSMUSG00000081519.2	ENSMUST00000117500.2	448	1	-131	-146	-131	146	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	23398740	23399465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_23398700_23399500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013891	chr2	+	1881	2	ISM	ENSMUSG00000026981.16	ENSMUST00000114482.3	1986	4	3204	-244	3204	244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTGCACTCAATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	24238525	24241192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_24238641_24239426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013892	chr2	+	1844	1	Genic_Genomic	ENSMUSG00000026981.16	novel	NA	NA	NA	NA	4342	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCCTTTAATTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	24239663	24241507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_24239700_24241500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013893	chr2	-	256	2	ISM	ENSMUSG00000036893.18	ENSMUST00000114418.10	4902	26	78076	15419	78076	-14999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCAGCCCTATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	24703639	24696225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_24696381_24703538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013894	chr2	-	160	1	ISM	ENSMUSG00000026972.16	ENSMUST00000102935.10	1574	8	9652	0	9652	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	24815523	24815363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_24815400_24815500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013895	chr2	-	208	2	ISM	ENSMUSG00000026972.16	ENSMUST00000102935.10	1574	8	9326	199	9326	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATGTCCAGGGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	24815849	24815562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_24815689_24815767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013896	chr2	-	207	2	ISM	ENSMUSG00000026972.16	ENSMUST00000102935.10	1574	8	8785	743	8785	-743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCCTGGGACCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	24816390	24816106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_24816207_24816283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013897	chr2	-	214	2	ISM	ENSMUSG00000026972.16	ENSMUST00000102935.10	1574	8	8213	1235	8213	-1235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCAAGGACACCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	24816962	24816598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_24816740_24816889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013898	chr2	-	194	2	ISM	ENSMUSG00000026972.16	ENSMUST00000102935.10	1574	8	7986	1539	7986	-1539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGATATTGAGGTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	24817189	24816902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_24817045_24817137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013899	chr2	+	217	3	ISM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	724	6508	724	-6508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGCTAGGTTTGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	24853135	24855667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_24853169_24853467_24853556_24855571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013900	chr2	+	241	2	ISM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	6648	2485	6648	-2485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGGGGACATAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	24859059	24859690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_24859128_24859517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013901	chr2	+	321	2	ISM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	7104	495	7104	-495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACTCTAGCCTAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	24859515	24861680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_24859691_24861534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013902	chr2	+	203	1	ISM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	9561	0	9561	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24861972	24862175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_24862000_24862200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013903	chr2	-	780	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTTTGAATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	24865114	24864128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_24864694_24864899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013904	chr2	-	3254	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCACCTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25086897	25082977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25085938_25086603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013905	chr2	-	2965	1	NIC	ENSMUSG00000059555.7	novel	3255	2	NA	NA	956	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCACCTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25085942	25082977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_25083000_25085900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013906	chr2	-	1214	1	Genic_Genomic	ENSMUSG00000036752.5	novel	NA	NA	NA	NA	1221	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1070	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGCCTGTCCAATTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25113384	25112170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_25112200_25113400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013907	chr2	-	1273	3	FSM	ENSMUSG00000036752.5	ENST00000568866.5	1274	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCACAGCCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25114604	25112275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25113381_25114135_25114245_25114545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013908	chr2	-	1304	3	NNC	ENSMUSG00000036752.5	novel	1274	3	NA	NA	-1	-31	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGAGGCTGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	25114715	25112350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_25113376_25114135_25114245_25114545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013909	chr2	-	1219	4	FSM	ENSMUSG00000036752.5	ENST00000561967.1	1366	4	2	145	2	-145	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGGTGAAGGCATGGATG	NA	NA	NA	NA	NA	NA	NA	NA	25114603	25112464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25113406_25113945_25114057_25114135_25114245_25114545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013910	chr2	-	792	3	FSM	ENSMUSG00000036752.5	ENST00000562809.1	792	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCCTGTGATCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	25114605	25112759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25113381_25113945_25114057_25114545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013911	chr2	-	384	3	NNC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	357	-456	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCTCCTTATCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	25114248	25113215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_25113376_25113945_25114057_25114135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013912	chr2	-	545	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	2	1051	2	-463	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGGGTACCCTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	25114712	25113222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013913	chr2	-	602	2	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	3509	-3	3509	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTACCATAGCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	25120718	25119059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25119528_25120584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013914	chr2	-	878	4	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	3072	-3	3072	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTACCATAGCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	25121155	25119059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013915	chr2	-	471	1	NIC	ENSMUSG00000006469.14	novel	2183	13	NA	NA	4697	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTACCATAGCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	25119530	25119059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_25119100_25119500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013916	chr2	-	581	5	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	2215	1925	2215	-1925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGCAAGGGTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25122012	25120987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013917	chr2	-	661	5	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	1180	2605	1180	-2605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCAGAGGAAGGTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	25123047	25121667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013918	chr2	-	628	5	ISM	ENSMUSG00000006469.14	ENST00000538474.5	2000	13	8	3110	8	-3110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCCTCTAAGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	25124346	25122172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25122303_25122391_25122521_25122979_25123067_25123314_25123442_25124191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013919	chr2	+	431	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	423	0	423	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCTCTGAATTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25145873	25146304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_25145900_25146300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013920	chr2	+	1633	2	ISM	ENSMUSG00000048707.10	ENST00000409012.6	2652	5	14	5486	14	-5485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGATGCTGAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	25152701	25154412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25153192_25153269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013921	chr2	+	1743	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	779	265	721	-265	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGACATCTGTCCATACT	NA	NA	NA	NA	NA	NA	NA	NA	25153408	25159632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013922	chr2	+	105	1	ISM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	7163	0	7105	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGCCTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	25159792	25159897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25159800_25159900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013923	chr2	-	354	1	Genic_Genomic	ENSMUSG00000026966.7	novel	NA	NA	NA	NA	1025	1	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGCTAGCTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	25161403	25161049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_25161000_25161400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013924	chr2	-	648	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	5	209	5	-209	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCTCTCTCTGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	25162423	25161259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25161594_25161940_25162141_25162309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013925	chr2	-	319	2	ISM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	21	869	21	-869	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGCCTTACTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	25162407	25161919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25162141_25162309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013926	chr2	+	1136	4	ISM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	7803	101	7803	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAGCAAGAGTGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	25170292	25175826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25170499_25174573_25174704_25174948_25175185_25175262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013927	chr2	+	1897	2	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	16805	3	16805	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGTGTGCAGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	25239545	25242221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25239595_25240373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013928	chr2	+	1834	1	ISM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	17650	0	17650	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	25240390	25242224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25240400_25242200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013929	chr2	-	683	1	Genic_Genomic	ENSMUSG00000026956.16	novel	NA	NA	NA	NA	5115	4	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCCACGTGGTGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	25250579	25249896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_25249900_25250600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013930	chr2	-	991	4	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	2294	1258	2294	-1258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCGATTGGCATAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	25253400	25251158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013931	chr2	-	640	4	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	1458	2779	1458	-2779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGAGGGGCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	25254236	25252679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25252861_25253255_25253397_25253817_25254012_25254112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013932	chr2	-	822	5	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	595	3424	595	-3424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAGCCGCTAAGACCGA	NA	NA	NA	NA	NA	NA	NA	NA	25255099	25253324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013933	chr2	-	901	4	ISM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	12	4209	12	-4209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCAGGCTTTCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25255682	25254109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25254286_25254523_25254700_25254892_25255098_25255338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013934	chr2	+	822	6	ISM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	69	1168	-3	-1151	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCAACACCACGAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	25293151	25298338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013935	chr2	+	155	2	ISM	ENSMUSG00000015094.17	ENSMUST00000055921.14	1412	10	4291	1772	1272	-1755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGGAGCCTGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25297473	25297734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25297555_25297660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013936	chr2	+	663	4	ISM	ENSMUSG00000015094.17	ENST00000371600.7	1195	8	2068	-17	2068	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTCTGGGTTCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	25298269	25299506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25298360_25298618_25298699_25298916_25299014_25299110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013937	chr2	-	743	6	ISM	ENSMUSG00000047617.12	ENSMUST00000114261.9	981	7	18	293	18	-293	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGCCACCTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	25351088	25349786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666_25350728_25350798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013938	chr2	+	794	3	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	2684	842	2684	-842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCTCAGGTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	25393445	25394641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25393879_25394191_25394340_25394428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013939	chr2	+	1124	3	ISM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	3429	0	3429	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	25394190	25395483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25394340_25394428_25394642_25394721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013940	chr2	+	767	1	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	3955	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	25394716	25395483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_25394700_25395500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013941	chr2	-	1072	1	ISM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	27887	0	27857	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGTTGTATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	25409065	25407993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25408000_25409100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013942	chr2	-	1343	3	ISM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	22393	-253	22393	253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGCTGTGATGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	25414529	25408624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25409641_25410339_25410489_25414351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013943	chr2	+	858	5	FSM	ENSMUSG00000015092.10	ENST00000371649.5	780	5	-77	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCTCCTGGATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25447858	25452092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013944	chr2	+	545	4	ISM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	2302	-4	2225	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGATTTTTCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	25450160	25452098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25450215_25450551_25450713_25450980_25451075_25451862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013945	chr2	+	235	1	Genic_Genomic	ENSMUSG00000015092.10	novel	NA	NA	NA	NA	3926	2	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGGATTTTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	25451861	25452096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_25451900_25452100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013946	chr2	-	938	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGACTTGTGTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25465236	25463440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25463712_25464199_25464325_25464694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013947	chr2	-	792	1	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	24712	0	24712	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25473821	25473029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25473000_25473800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013948	chr2	-	777	2	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	24358	255	24358	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCCTGAGCACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	25474175	25473284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25474001_25474114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013949	chr2	-	773	4	ISM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	20927	2427	20927	-2427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACCCCAGGAAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	25477606	25475456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25475549_25475635_25475846_25476879_25477031_25477286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013950	chr2	-	793	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGTTCTGTGGGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	25512016	25510079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013951	chr2	-	214	2	ISM	ENSMUSG00000026939.13	ENST00000290079.9	271	3	207	-1	207	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCAGAGGGACAGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	25511480	25511069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25511186_25511382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013952	chr2	-	273	3	FSM	ENSMUSG00000026939.13	ENST00000290079.9	271	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCAGAGGGACAGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	25511688	25511069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_25511186_25511382_25511471_25511619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013953	chr2	-	134	1	NIC	ENSMUSG00000026939.13	novel	795	5	NA	NA	484	1	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCAGAGGGACAGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	25511203	25511069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_25511100_25511200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013954	chr2	-	200	2	NNC	ENSMUSG00000026939.13	novel	271	3	NA	NA	214	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCAGAGGGACAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	25511473	25511070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_25511180_25511382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013955	chr2	-	193	2	NNC	ENSMUSG00000026939.13	novel	795	5	NA	NA	214	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGCCCAGAGGGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	25511473	25511073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_25511180_25511386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013956	chr2	+	601	5	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	4265	17684	4265	-17681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTGGGGGCACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	25782345	25788448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25782421_25782485_25782570_25783140_25783236_25784293_25784475_25788282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013957	chr2	+	489	3	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	6208	17284	6208	-17281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCTGATCAGGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	25784288	25788848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25784475_25788282_25788448_25788710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013958	chr2	+	471	4	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	10202	15644	10202	-15641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTTGGGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25788282	25790488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25788448_25788710_25788848_25790234_25790299_25790383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013959	chr2	+	502	3	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	12817	14129	12817	-14126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGGTGAAGTATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25790897	25792003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25791010_25791220_25791371_25791763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013960	chr2	+	620	3	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	13146	12525	13146	-12522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGAGTGGAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25791226	25793607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25791371_25791763_25792003_25793370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013961	chr2	+	716	4	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	13721	9284	13721	-9281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCGGAGTACAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	25791801	25796848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25792003_25793370_25793606_25795284_25795391_25796674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013962	chr2	+	440	4	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	15436	8774	15436	-8771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTGAGAACAGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	25793516	25797358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25793606_25795284_25795391_25796674_25796848_25797286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013963	chr2	+	463	4	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	17204	8493	17204	-8490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAATGTGCAAACCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	25795284	25797639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25795391_25796674_25796848_25797286_25797359_25797527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013964	chr2	+	424	4	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	19447	6452	19447	-6449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGCAGTAAGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	25797527	25799680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25797663_25798056_25798169_25799216_25799319_25799605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013965	chr2	+	659	4	ISM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	21134	4764	21134	-4761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGCTGGCAACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	25799214	25801368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25799319_25799605_25799690_25799825_25799949_25801020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013966	chr2	+	547	3	ISM	ENSMUSG00000058740.15	ENST00000490355.6	3707	31	31920	3400	21732	-3400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTCTGCTCCAGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	25799812	25802729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25799949_25801020_25801369_25802666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013967	chr2	+	503	3	ISM	ENSMUSG00000058740.15	ENST00000490355.6	3707	31	33126	249	22938	-249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACCAAGTGCTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	25801018	25805880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_25801369_25802666_25802730_25805790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013968	chr2	-	1436	4	NNC	ENSMUSG00000026933.18	novel	5864	17	NA	NA	47460	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTTTCCACCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	25825550	25818920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_25820041_25823598_25823722_25824231_25824348_25825473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013969	chr2	-	1619	3	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	44060	6128	43776	-6128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGTAAGTGCCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	25829234	25825865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25826071_25826526_25826664_25827957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013970	chr2	-	1353	2	ISM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	42332	9321	42048	-9321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCCCAGAAGAAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25830962	25829058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25830326_25830876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013971	chr2	-	1927	1	Genic_Genomic	ENSMUSG00000026932.15	novel	NA	NA	NA	NA	34717	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTGACCTTTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	25947472	25945545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_25945500_25947500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013972	chr2	-	1980	2	ISM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	30503	3061	30503	-3061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTACTTTCCCAAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	25951686	25948607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_25950486_25951584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013973	chr2	-	2487	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGTGATTGCTTACGTT	NA	NA	NA	NA	NA	NA	NA	NA	26030535	26026823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_26028926_26030150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013974	chr2	-	2466	2	NNC	ENSMUSG00000087679.3	novel	2483	2	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	NA	NA	NA	NA	NA	NA	NA	26030521	26026825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_26028921_26030150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013975	chr2	-	2101	1	FSM	ENSMUSG00000087679.3	ENSMUST00000163836.2	420	1	-112	-1569	-112	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	NA	NA	NA	NA	NA	NA	NA	26028926	26026825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_26026800_26028900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013976	chr2	-	2297	1	ISM	ENSMUSG00000036327.19	ENSMUST00000091263.12	4011	9	14438	0	14438	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGCAAGCAAAAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	26100945	26098648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26098600_26100900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013977	chr2	+	380	1	ISM	ENSMUSG00000026930.16	ENSMUST00000066936.9	3384	14	32343	0	17467	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	26237869	26238249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26237900_26238200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013978	chr2	-	397	1	ISM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	3593	0	3593	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCGGGGCGGCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	26238529	26238132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26238100_26238500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013979	chr2	-	874	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	1	2041	1	-2041	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTCTTAAGTAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	26242121	26240173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_26240571_26241346_26241487_26241784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013980	chr2	-	670	1	ISM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	5820	0	5820	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	26273483	26272813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26272800_26273500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013981	chr2	-	772	2	ISM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	4460	271	4460	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTTTGTGTGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26274843	26273084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26273707_26274693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013982	chr2	-	583	3	ISM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	4146	513	4146	-513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCGGGCTCAGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	26275157	26273326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26273707_26274693_26274834_26275094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013983	chr2	-	647	4	ISM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	1978	2293	1978	-2293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGCTTCAGGTAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	26277325	26275106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26275158_26275509_26275622_26276001_26276076_26276915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013984	chr2	-	635	4	ISM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	1619	2772	1619	-2772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGGAGGAGAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	26277684	26275585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26275622_26276001_26276076_26276915_26277324_26277567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013985	chr2	+	1338	4	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	3971	652	3962	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAATGTCCACAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	26283321	26286482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26283400_26283529_26283593_26285036_26285182_26285430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013986	chr2	+	1086	1	Genic_Genomic	ENSMUSG00000026926.15	novel	NA	NA	NA	NA	6694	5	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCTAGGTGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	26286053	26287139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_26286100_26287100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013987	chr2	-	743	2	ISM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	1	32036	1	-32034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGCCTGACCAACCCATG	NA	NA	NA	NA	NA	NA	NA	NA	26335225	26331478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26332083_26335086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013988	chr2	-	717	1	Genic_Genomic	ENSMUSG00000026922.14	novel	NA	NA	NA	NA	10470	1	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGAGTTCTTTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	26483784	26483067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_26483100_26483800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013989	chr2	-	1033	4	ISM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	7864	20	7774	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGGTCTCTTTCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	26486480	26483088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013990	chr2	-	748	4	ISM	ENSMUSG00000026922.14	ENST00000371694.7	950	5	6895	-2	6895	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTCCCACCTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	26487359	26483419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26483775_26484791_26484865_26486302_26486479_26487215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013991	chr2	-	806	5	FSM	ENSMUSG00000026922.14	ENST00000371694.7	950	5	13	131	13	-131	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGGACAGAAGGCCACGC	NA	NA	NA	NA	NA	NA	NA	NA	26494241	26483552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_26483775_26484791_26484865_26486302_26486479_26487215_26487350_26494040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013992	chr2	+	808	2	ISM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	6528	330	6528	-330	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTAAGGGACTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	26524996	26526179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26525176_26525550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013993	chr2	+	633	1	ISM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	7408	0	7408	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGTATGTGGATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	26525876	26526509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26525900_26526500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013994	chr2	-	445	1	ISM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	4971	0	4863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTGTCTTTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	26795718	26795273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26795300_26795700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013995	chr2	-	553	2	ISM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	1501	2237	1501	-2237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACACAGTCTCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	26799080	26797836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26798314_26799004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013996	chr2	+	800	7	ISM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	289	0	289	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	26801064	26803330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013997	chr2	+	808	3	ISM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	2506	-1	2506	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATGTGTATCATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	26808884	26810196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26809068_26809203_26809371_26809738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013998	chr2	+	459	1	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	3358	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26809736	26810195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_26809700_26810200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000013999	chr2	-	466	1	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	13423	0	13423	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGGTCCTATATGG	NA	NA	NA	NA	NA	NA	NA	NA	26810517	26810051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26810100_26810500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014000	chr2	-	618	2	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	9388	1710	9388	-1710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGATAAAATCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	26814552	26811761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26812184_26814356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014001	chr2	-	546	4	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	8244	1894	8244	-1894	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCATGGATGAGAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	26815696	26811945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014002	chr2	-	915	5	ISM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	227	4312	227	-4312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTGTGAGTACCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	26823713	26814363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014003	chr2	-	1506	6	ISM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	3667	75	3667	-75	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGACACTTGTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	26850731	26843652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014004	chr2	+	2014	2	ISM	ENSMUSG00000015488.15	ENSMUST00000114004.8	2194	3	4167	0	3500	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTTCCCATTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	26904104	26907436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26904178_26905495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014005	chr2	+	1106	3	ISM	ENSMUSG00000015488.15	ENSMUST00000114005.9	1286	4	4167	0	3500	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACCTGTTCATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	26904104	26906861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26904178_26905495_26905622_26905954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014006	chr2	+	730	3	ISM	ENSMUSG00000015488.15	ENSMUST00000114003.2	727	6	4891	915	4891	-915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGCAGAGGAAGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	26905495	26909395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_26905622_26908384_26908493_26908899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014007	chr2	+	600	1	Genic_Genomic	ENSMUSG00000015488.15	novel	NA	NA	NA	NA	9898	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGTCTGCCTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	26910502	26911102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_26910500_26911100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014008	chr2	-	1385	5	FSM	ENSMUSG00000009214.10	ENSMUST00000009358.9	1382	5	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCTGCTGAGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	26962191	26951644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_26952350_26952713_26952831_26956302_26956452_26957364_26957480_26961892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014009	chr2	-	721	3	FSM	ENSMUSG00000009216.8	ENST00000496132.2	728	3	8	-1	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTATCCTGCCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	27012935	27002489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_27002903_27003559_27003676_27012743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014010	chr2	-	417	1	NIC	ENSMUSG00000009216.8	novel	2959	3	NA	NA	10037	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTATCCTGCCGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	27002906	27002489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_27002500_27002900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014011	chr2	-	679	1	Genic_Genomic	ENSMUSG00000085008.2	novel	NA	NA	NA	NA	17134	7	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTAAGTGGAGACCACT	NA	NA	NA	NA	NA	NA	NA	NA	27035581	27034902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_27034900_27035600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014012	chr2	+	688	3	ISM	ENSMUSG00000000889.9	ENSMUST00000000910.7	2552	12	15763	116	15763	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCAGGCTGGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	27071007	27073096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_27071117_27071482_27071643_27072677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014013	chr2	-	946	1	ISM	ENSMUSG00000009614.17	ENSMUST00000102886.10	4521	21	57928	0	50376	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGGGGTACAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	27079350	27078404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27078400_27079400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014014	chr2	-	465	3	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	42022	0	42022	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGAGTGAACCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	27087704	27081894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27082027_27086660_27086830_27087540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014015	chr2	-	402	3	NNC	ENSMUSG00000009614.17	novel	1917	16	NA	NA	42078	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGAGTGAACCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	27087648	27081894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_27082027_27086660_27086823_27087540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014016	chr2	-	577	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	24527	4765	24527	-4765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATCCTGGCCCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	27105199	27086659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27086830_27087540_27087704_27101022_27101117_27105049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014017	chr2	-	480	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	20799	5689	20799	-5689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCAGGCTACCGTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	27108927	27087583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27087704_27101022_27101117_27105049_27105198_27108809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014018	chr2	-	478	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	18930	19148	18930	-19148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCCGCCGGGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	27110796	27101042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27101117_27105049_27105198_27108809_27108924_27110654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014019	chr2	-	470	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	14631	23201	14631	-23201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTCTGAAGATCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	27115095	27105095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27105198_27108809_27108924_27110654_27110794_27114980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014020	chr2	-	599	5	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	11324	26914	11324	-26914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGTTATCATGAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	27118402	27108808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27108924_27110654_27110794_27114980_27115095_27117088_27117173_27118255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014021	chr2	-	438	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	9183	33086	9183	-33086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCAGCCTGAGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	27120543	27114980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27115095_27117088_27117173_27118255_27118398_27120445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014022	chr2	-	411	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	8856	35192	8856	-35192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAAGACTCTTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	27120870	27117086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27117173_27118255_27118398_27120445_27120541_27120782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014023	chr2	-	416	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	5297	36396	5297	-36396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGACGCAACATGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	27124429	27118290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27118398_27120445_27120541_27120782_27120870_27124302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014024	chr2	-	495	5	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	244	38577	244	-38577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTACAGCTATGACATC	NA	NA	NA	NA	NA	NA	NA	NA	27129482	27120471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27120541_27120782_27120870_27124302_27124433_27125489_27125595_27129378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014025	chr2	-	431	4	ISM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	2	42411	2	-42411	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTGGGGAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	27129724	27124305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27124433_27125489_27125595_27129378_27129480_27129626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014026	chr2	+	990	1	FSM	ENSMUSG00000109946.2	ENSMUST00000209765.2	1898	1	908	0	908	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	27333243	27334233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_27333200_27334200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014027	chr2	-	2955	1	Genic_Genomic	ENSMUSG00000026918.17	novel	NA	NA	NA	NA	15584	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTGTGGTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	27338544	27335589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_27335600_27338500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014028	chr2	-	3315	3	ISM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	24865	90	13583	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGTAGGAAGTACTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	27340545	27335680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_27338593_27339212_27339339_27340268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014029	chr2	+	431	1	Genic_Genomic	ENSMUSG00000085929.2	novel	NA	NA	NA	NA	2507	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGCTGGTCCCTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	27432944	27433375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_27432900_27433400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014030	chr2	+	874	2	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	146218	1953	146218	-1953	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTGCCTGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	27922654	27927573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_27922837_27926881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014031	chr2	+	891	1	ISM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	152199	0	152199	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTAGCTGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27928635	27929526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_27928600_27929500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014032	chr2	-	822	7	FSM	ENSMUSG00000026835.16	ENST00000371806.4	832	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTAGCTTCCCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	27972988	27966594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_27966835_27968258_27968394_27969133_27969264_27969633_27969762_27970569_27970634_27970907_27970962_27972917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014033	chr2	+	587	3	ISM	ENSMUSG00000026833.19	ENST00000277415.15	963	4	47	1742	47	-1736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGCCCCTCGAGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	28083195	28102701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_28083475_28098089_28098240_28102543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014034	chr2	+	556	3	ISM	ENSMUSG00000026833.19	ENSMUST00000102879.4	1072	4	2467	27	2467	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAACTGACAAATAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	28098137	28104410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_28098240_28102543_28102700_28104112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014035	chr2	+	326	1	Genic_Genomic	ENSMUSG00000026833.19	novel	NA	NA	NA	NA	8448	1	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTCTGAGGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	28104118	28104444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_28104100_28104400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014036	chr2	+	2072	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	10	-2	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTAGAACTTTGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	28358087	28361192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014037	chr2	+	456	2	ISM	ENSMUSG00000026821.17	ENSMUST00000100241.10	3102	18	10149	8249	10149	-7880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCTTGGGGCCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	28433702	28434399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_28433760_28434000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014038	chr2	+	991	1	Genic_Genomic	ENSMUSG00000026821.17	novel	NA	NA	NA	NA	18550	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTTACTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	28442103	28443094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_28442100_28443100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014039	chr2	-	671	4	ISM	ENSMUSG00000026818.6	ENST00000421286.4	841	5	5349	0	5349	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCACTCCCCCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	28448025	28446199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28446386_28446685_28446884_28447626_28447831_28447942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014040	chr2	-	207	1	ISM	ENSMUSG00000026816.15	ENSMUST00000113889.9	2667	12	16672	0	16428	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGTTTGATGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	28456529	28456322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28456300_28456500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014041	chr2	-	237	2	ISM	ENSMUSG00000026816.15	ENSMUST00000113889.9	2667	12	15455	757	15211	565	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGACCTGAAAACACCCC	NA	NA	NA	NA	NA	NA	NA	NA	28457746	28457079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28457190_28457619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014042	chr2	-	401	3	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	13566	0	13566	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCGCTGTTCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	28459391	28457644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28457815_28458496_28458640_28459303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014043	chr2	-	171	1	NIC	ENSMUSG00000026816.15	novel	2667	12	NA	NA	15142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCGCTGTTCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	28457815	28457644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_28457600_28457800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014044	chr2	+	232	2	Antisense	novelGene_ENSMUSG00000026816.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCTCTCTCTGTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	28457663	28458578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_28457817_28458499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014045	chr2	-	259	3	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	12429	933	12429	-933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCCTCCCCAAGACCACA	NA	NA	NA	NA	NA	NA	NA	NA	28460528	28458577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28458640_28459303_28459387_28460414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014046	chr2	+	201	2	Antisense	novelGene_ENSMUSG00000026816.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCATGGAAGCAAGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	28459301	28460528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_28459375_28460400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014047	chr2	-	275	3	NNC	ENSMUSG00000026816.15	novel	1235	9	NA	NA	12251	-1657	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGGGGTCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	28460706	28459301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_28459387_28460420_28460529_28460624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014048	chr2	-	207	2	NNC	ENSMUSG00000026816.15	novel	1235	9	NA	NA	12429	-1657	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGGGGTCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	28460528	28459301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_28459387_28460406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014049	chr2	-	260	3	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	12251	1678	12251	-1678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTGAATGTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	28460706	28459322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28459387_28460414_28460529_28460624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014050	chr2	-	313	3	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	11716	2769	11716	-2769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGAGTGTCACTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	28461241	28460413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28460529_28460624_28460706_28461124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014051	chr2	-	287	3	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	10643	2996	10643	-2996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGTCAAGAAGACATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	28462314	28460640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28460706_28461124_28461240_28462207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014052	chr2	-	404	3	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	9368	3497	9368	-3497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGGAATGAAATACGGTA	NA	NA	NA	NA	NA	NA	NA	NA	28463589	28461141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28461240_28462207_28462313_28463388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014053	chr2	-	407	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	4859	5744	4859	-5744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTGATGCCCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	28468098	28463388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28463585_28467887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014054	chr2	-	417	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	3210	10243	3210	-10243	internal_fragment	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCAGCCCCCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	28469747	28467887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28468087_28469529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014055	chr2	-	328	2	ISM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	3	11895	3	-11895	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCCAGGGTAACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	28472954	28469539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28469750_28472836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014056	chr2	+	743	5	ISM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	3	7750	3	-7345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAGTTCAAAACAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	28548616	28555174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014057	chr2	+	750	6	ISM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	3038	1867	3038	-1462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCAGTCTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	28551651	28561057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014058	chr2	-	582	3	ISM	ENSMUSG00000026809.16	ENST00000356311.10	725	4	2223	0	2223	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCCTGGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	28583842	28582096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28582130_28582729_28583072_28583635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014059	chr2	-	676	3	ISM	ENSMUSG00000026809.16	ENST00000356311.10	725	4	17	632	17	-632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTACTTGGCTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	28586048	28582728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_28583072_28583635_28583839_28585918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014060	chr2	-	1285	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	-72	-213	-72	213	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGCTGGGCATGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	28824693	28823408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_28823400_28824700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014061	chr2	+	547	4	ISM	ENSMUSG00000026799.16	ENST00000357028.6	843	7	45	53111	45	-53111	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCTGCTTGCCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	29236884	29361400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014062	chr2	+	456	2	ISM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	175953	51	175944	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGTAACTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29412783	29414754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29412864_29414378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014063	chr2	+	428	1	Genic_Genomic	ENSMUSG00000026799.16	novel	NA	NA	NA	NA	177539	1	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTCTGCTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	29414378	29414806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_29414400_29414800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014064	chr2	-	350	1	Genic_Genomic	ENSMUSG00000039826.14	novel	NA	NA	NA	NA	11168	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGATGTTTTAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	29666466	29666116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_29666100_29666500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014065	chr2	+	331	3	ISM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	176	7187	176	-7187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGAGTTTCCGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	29678446	29680568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29678581_29679914_29680012_29680468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014066	chr2	+	225	2	ISM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	7122	1713	7122	-1713	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTTCCTGGGGTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	29685392	29686042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29685523_29685947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014067	chr2	+	223	2	ISM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	7690	1194	7690	-1194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAAAACATATCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	29685960	29686561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29686042_29686419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014068	chr2	+	201	1	Genic_Genomic	ENSMUSG00000026798.11	novel	NA	NA	NA	NA	9295	11	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGCCGGGCGTGGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	29687565	29687766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_29687600_29687800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014069	chr2	-	856	2	FSM	ENSMUSG00000039798.3	ENSMUST00000047607.3	1406	2	550	0	550	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACCTAAGCAACATCAT	NA	NA	NA	NA	NA	NA	NA	NA	29759779	29758734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_29759383_29759571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014070	chr2	+	294	2	ISM	ENSMUSG00000026790.20	ENSMUST00000113764.4	2450	16	11639	19085	11639	-19085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGGAGCCGATGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	29792190	29793463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29792354_29793332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014071	chr2	+	317	3	ISM	ENSMUSG00000026790.20	ENSMUST00000113764.4	2450	16	12781	9913	12781	-9913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTCAGAGAAAGCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	29793332	29802635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29793463_29793987_29794120_29802580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014072	chr2	+	545	3	ISM	ENSMUSG00000026790.20	ENSMUST00000113764.4	2450	16	30233	-3	30233	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	29810784	29812551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29810898_29811015_29811121_29812224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014073	chr2	+	314	2	ISM	ENSMUSG00000026790.20	ENST00000604420.5	2807	21	36883	12	36162	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGCCACCTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29816713	29820667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29816842_29820481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014074	chr2	+	665	2	ISM	ENSMUSG00000019715.15	ENST00000684314.1	1770	13	19260	-435	19260	435	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATGGATCATGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	29847773	29849071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29847826_29848458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014075	chr2	+	653	1	ISM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	24293	0	21217	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTGCTGCATGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	29849730	29850383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29849700_29850400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014076	chr2	+	790	7	FSM	ENSMUSG00000054766.14	ENST00000372688.8	790	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACACCCAAGCCCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	29957176	29960612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_29957217_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014077	chr2	+	476	5	FSM	ENSMUSG00000054766.14	ENST00000479329.1	477	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTACTGACCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	29958284	29960275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_29958339_29958989_29959115_29959338_29959443_29959529_29959644_29960196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014078	chr2	+	2137	5	ISM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	2879	50	1063	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGTCAGGAATCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	29959346	29962539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014079	chr2	+	1650	1	Genic_Genomic	ENSMUSG00000054766.14	novel	NA	NA	NA	NA	2657	1	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTCATTCTCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	29960940	29962590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_29960900_29962600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014080	chr2	-	576	1	Genic_Genomic	ENSMUSG00000015335.17	novel	NA	NA	NA	NA	2117	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGTGGACTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	29981530	29980954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_29981000_29981500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014081	chr2	-	699	2	ISM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	1801	85	1801	-85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACAACCCCTGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	29981846	29981047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_29981579_29981678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014082	chr2	+	246	1	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTAAGCCAGGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	30051393	30051639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr2_+_30051400_30051600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014083	chr2	+	1064	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTGTCCTGCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30061504	30064082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_30062079_30062853_30062964_30063702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014084	chr2	-	366	1	ISM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	4614	0	4614	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCTCTAGACCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	30063848	30063482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30063500_30063800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014085	chr2	-	416	2	ISM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	3420	408	3420	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCACCAGGAACCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	30065042	30063890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30064198_30064933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014086	chr2	-	421	4	ISM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	967	2902	967	-2902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGAAGGTAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	30067495	30066384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30066505_30066626_30066677_30066750_30066841_30067334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014087	chr2	-	359	3	ISM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	728	3289	728	-3289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTACCTGGAGTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	30067734	30066771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30066841_30067334_30067495_30067604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014088	chr2	+	1077	2	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	2845	7657	2845	-7652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCATCCTTCTACATC	NA	NA	NA	NA	NA	NA	NA	NA	30130578	30146145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_30130690_30145179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014089	chr2	+	1859	2	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	18633	1062	18633	-1057	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTAAGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	30146366	30152740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_30147345_30151859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014090	chr2	+	982	1	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	25087	0	25087	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	30152820	30153802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_30152800_30153800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014091	chr2	+	375	3	ISM	ENSMUSG00000079484.13	ENST00000308941.9	809	9	13047	0	13047	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTACCAAGGTTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	30169965	30171149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_30170096_30170182_30170300_30171021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014092	chr2	+	505	2	ISM	ENSMUSG00000079484.13	ENSMUST00000113643.8	1195	10	14165	-14	14107	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTACGGGTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	30171025	30172163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_30171149_30171781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014093	chr2	-	391	1	ISM	ENSMUSG00000026860.17	ENSMUST00000100215.11	1749	12	14041	0	14041	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	30235211	30234820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30234800_30235200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014094	chr2	-	918	3	ISM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	12855	-2	12830	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	30236422	30234820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30235440_30235710_30235952_30236364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014095	chr2	-	664	1	ISM	ENSMUSG00000026853.16	ENSMUST00000102855.8	4224	15	14008	629	11484	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTAGAATACATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	30291775	30291111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30291100_30291800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014096	chr2	-	870	3	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	7955	-335	7955	335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTCTCAACCTCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	30295304	30292174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30292806_30293500_30293624_30295188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014097	chr2	-	461	4	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	6776	989	6776	-909	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACTGGCTCAGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	30296483	30293498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30293624_30295188_30295301_30295396_30295517_30296379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014098	chr2	-	497	4	NNC	ENSMUSG00000026853.16	novel	1710	11	NA	NA	6111	-2620	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGGTAGCCCTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30297148	30295209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_30295301_30295396_30295517_30296379_30296481_30296963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014099	chr2	-	582	4	NNC	ENSMUSG00000026853.16	novel	1710	11	NA	NA	5364	-2807	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCAGGGCTGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	30297895	30295396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_30295517_30296379_30296481_30296963_30297147_30297717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014100	chr2	-	524	3	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	5022	4458	5022	-4378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAGGACCTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30298237	30296967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30297147_30297717_30297893_30298067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014101	chr2	-	560	4	ISM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	44	5558	44	-5478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCACCACTGCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30303215	30298067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30298234_30298752_30298807_30299968_30300088_30302994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014102	chr2	-	809	3	ISM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	28	8904	-14	-7427	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCCTGCCCAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30305797	30300016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30300088_30302994_30303259_30305323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014103	chr2	+	1248	7	ISM	ENSMUSG00000039515.12	ENST00000348141.9	1332	10	15971	-451	-9816	-109	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTTGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30322048	30337034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014104	chr2	+	734	1	ISM	ENSMUSG00000039515.12	ENSMUST00000113601.10	1838	4	30942	0	4338	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGAGACATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30337084	30337818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_30337100_30337800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014105	chr2	+	1375	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	13	-1	13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTGGATGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	30697850	30713046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014106	chr2	-	1009	4	FSM	ENSMUSG00000039483.11	ENST00000277459.8	1007	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAGACACTTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	30717103	30713870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_30714517_30714652_30714740_30715666_30715774_30716934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014107	chr2	-	2229	2	ISM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	91	3942	91	-3179	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCTCCATTCTACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30720254	30717050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30717111_30718085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014108	chr2	+	2512	3	ISM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	2815	0	2815	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGAGCTTTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	30845785	30849027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_30845966_30846459_30846588_30846823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014109	chr2	-	1402	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	30857946	30850638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014110	chr2	-	1568	4	ISM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	5864	-20	5864	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTGACCTGTTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30866089	30862168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014111	chr2	+	2070	1	ISM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	64390	0	64390	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTAGCCCCACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	31106717	31108787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_31106700_31108800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014112	chr2	+	1270	4	ISM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	38326	2718	38326	-2718	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACACAGTAGAGAGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	31174160	31183283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_31174248_31174673_31174752_31177298_31177416_31182295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014113	chr2	+	1026	1	Genic_Genomic	ENSMUSG00000062661.7	novel	NA	NA	NA	NA	49142	1	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGTGAGCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	31184976	31186002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_31185000_31186000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014114	chr2	+	377	4	ISM	ENSMUSG00000039356.16	ENST00000372352.7	872	9	3968	1945	3968	-1945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAACATCATCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	31564707	31568639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_31564797_31565850_31565917_31566679_31566749_31568486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014115	chr2	+	674	3	ISM	ENSMUSG00000039356.16	ENST00000372352.7	872	9	7733	-295	7733	295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAAACTGTCCTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	31568472	31570879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_31568640_31569862_31569992_31570501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014116	chr2	+	428	1	ISM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	10207	0	10194	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGAGTCTCACCGCGT	NA	NA	NA	NA	NA	NA	NA	NA	31570933	31571361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_31570900_31571400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014117	chr2	+	358	5	ISM	ENSMUSG00000001864.14	ENST00000372300.5	388	6	178	-1	178	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGACCTTCCGGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31840538	31861009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_31840603_31852226_31852294_31855082_31855125_31859641_31859732_31860914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014118	chr2	+	891	2	ISM	ENSMUSG00000001864.14	ENSMUST00000148056.4	670	5	19313	-415	19298	415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCTACTTTCAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	31859658	31861659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_31859805_31860914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014119	chr2	+	804	1	ISM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	22500	0	22290	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCTTTGTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31862650	31863454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_31862600_31863500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014120	chr2	+	2063	5	FSM	ENSMUSG00000001855.16	ENST00000483497.6	2324	5	163	98	163	-98	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGTTCAGCCCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	31923375	31937490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014121	chr2	+	400	1	FSM	ENSMUSG00000066068.6	ENSMUST00000118269.2	318	1	-5	-77	-5	77	mono-exon	FALSE	NA	NA	NA	NA	NA	1356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTAAGACCAGAGGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	32161851	32162251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_32161900_32162300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014122	chr2	-	777	5	FSM	ENSMUSG00000044627.12	ENSMUST00000050410.11	775	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTCTGATCCTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32178088	32168826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014123	chr2	-	317	1	NIC	ENSMUSG00000044627.12	novel	712	4	NA	NA	3732	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	32169144	32168827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_32168800_32169100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014124	chr2	+	1517	1	NIC	ENSMUSG00000002546.18	novel	4361	26	NA	NA	18059	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGTGTTCGTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	32196416	32197933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_32196400_32197900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014125	chr2	-	197	2	ISM	ENSMUSG00000026825.18	ENST00000565702.1	462	3	2229	0	2170	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGATCCCTCCTACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32202831	32199015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32199077_32202695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014126	chr2	-	454	3	FSM	ENSMUSG00000026825.18	ENST00000560794.1	423	3	-30	-1	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGATCCCTCCTACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32205031	32199015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_32199077_32202674_32202938_32204901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014127	chr2	+	258	3	ISM	ENSMUSG00000039205.17	ENSMUST00000113332.8	2973	18	4229	7989	3617	-7983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGAACCACCAGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	32257438	32260326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32257545_32260058_32260138_32260253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014128	chr2	+	267	2	ISM	ENSMUSG00000039205.17	ENSMUST00000113338.9	2666	16	12197	1882	12197	-1881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAAGCAGGTGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	32266018	32266428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32266135_32266277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014129	chr2	+	173	1	ISM	ENSMUSG00000039205.17	ENSMUST00000113332.8	2973	18	14933	0	14321	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCACCAGCACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32268142	32268315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32268100_32268300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014130	chr2	-	393	1	ISM	ENSMUSG00000039195.5	ENSMUST00000146423.2	2618	2	2370	2003	2370	1	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTTCTTTGTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	32269504	32269111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32269100_32269500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014131	chr2	-	620	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	-2	62	-2	-62	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTCTTTCCCCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	32271952	32269174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_32269546_32271703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014132	chr2	+	171	2	ISM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	623	8096	623	-4603	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTCTCCTCCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	32286530	32287688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32286563_32287549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014133	chr2	+	150	2	ISM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	4153	5280	2507	-1787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTCATGCTGGACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	32290060	32290504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32290121_32290414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014134	chr2	+	570	4	ISM	ENSMUSG00000026820.6	ENST00000617202.4	730	7	2864	0	2864	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAAGCCCCCTCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	32290417	32292291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32290565_32290889_32291091_32291498_32291617_32292187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014135	chr2	-	1430	1	ISM	ENSMUSG00000026819.16	ENSMUST00000052119.14	3529	11	15199	4	5680	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAATGGAGCCAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	32305932	32304502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32304500_32305900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014136	chr2	-	1757	3	ISM	ENSMUSG00000026819.16	ENST00000683206.1	2704	11	5036	0	5036	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTTCAAATGTGACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	32306576	32304512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32304788_32305008_32306335_32306420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014137	chr2	-	1509	3	ISM	ENSMUSG00000026819.16	ENST00000683206.1	2704	11	4431	542	4431	17	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTTTATTCATATTT	NA	NA	NA	NA	NA	NA	NA	NA	32307181	32305054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32306335_32306420_32306572_32307103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014138	chr2	+	1034	2	ISM	ENSMUSG00000039157.13	ENST00000373095.6	2883	12	30896	1189	30896	-1189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGGGTGAACTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	32456498	32458369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32456570_32457406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014139	chr2	+	1031	2	NNC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	31983	-44	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTAGGGTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32457585	32459514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_32458433_32459330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014140	chr2	+	195	2	ISM	ENSMUSG00000026810.13	ENSMUST00000140592.8	1412	3	347	1163	347	-1163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTCCCGATCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	32461216	32462412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32461308_32462308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014141	chr2	+	269	2	ISM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	1431	463	1431	-447	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTCTTTGGGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	32462300	32463128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32462412_32462970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014142	chr2	+	186	2	NNC	ENSMUSG00000026810.13	novel	869	4	NA	NA	1438	-519	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTCCATATCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	32462307	32463056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_32462408_32462970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014143	chr2	+	190	1	Genic_Genomic	ENSMUSG00000026810.13	novel	NA	NA	NA	NA	2533	1	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCATCCTTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	32463402	32463592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_32463400_32463600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014144	chr2	+	410	3	ISM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	10	10068	10	-9445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCAGCCAGGCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	32477116	32479642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32477240_32477592_32477694_32479456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014145	chr2	+	641	3	ISM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	-45	4733	-45	-4733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAACGCATGATGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	32477591	32484354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32477694_32479456_32479643_32484001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014146	chr2	+	833	3	ISM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	6424	1691	6424	-1691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGAAGATGCCATTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	32484060	32487396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32484415_32485705_32485814_32487025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014147	chr2	+	402	1	ISM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	12202	0	11672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCAACCACTTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	32489308	32489710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32489300_32489700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014148	chr2	+	1548	3	ISM	ENSMUSG00000026811.19	ENST00000291839.10	1973	7	7769	-1	5585	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATTCCCTGCTGCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	32504820	32510431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32505181_32508508_32508617_32509351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014149	chr2	+	380	2	ISM	ENSMUSG00000026811.19	ENSMUST00000081879.12	2345	6	6415	2237	5655	-962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTGTATGGCATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	32504890	32508579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32505200_32508508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014150	chr2	+	1361	1	ISM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	12420	0	10222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	32509457	32510818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32509500_32510800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014151	chr2	+	1895	4	ISM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	730	-9	730	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGTATTGAAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	32520245	32525073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32520411_32521087_32521205_32523305_32523498_32523652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014152	chr2	+	1482	2	NNC	ENSMUSG00000026817.15	novel	2085	7	NA	NA	3909	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	32523424	32525070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_32523489_32523652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014153	chr2	+	1423	1	NIC	ENSMUSG00000026817.15	novel	2085	7	NA	NA	4132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	32523647	32525070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_32523600_32525100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014154	chr2	+	651	1	ISM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	35413	0	35386	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGCTTCAATTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	32572019	32572670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32572000_32572700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014155	chr2	-	848	1	ISM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	10729	0	9266	0	mono-exon	FALSE	NA	NA	NA	NA	NA	239	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTATTCTCCTAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	32573468	32572620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32572600_32573500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014156	chr2	-	1033	4	ISM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	6852	31	6852	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTGGCAAAAGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	32575882	32572742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014157	chr2	-	478	5	ISM	ENSMUSG00000009566.13	ENST00000373228.5	995	11	5058	405	5057	-405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTCTTGCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	32577677	32575730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32575882_32576565_32576648_32577156_32577235_32577424_32577528_32577613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014158	chr2	-	274	3	ISM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	7411	3114	5948	-409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGAGCTCTCTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	32576786	32575734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32575882_32576565_32576656_32576749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014159	chr2	-	266	3	ISM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	7006	3952	5543	-1247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGTGGTAAGTTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	32577191	32576572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32576656_32576749_32576898_32577156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014160	chr2	-	164	2	ISM	ENSMUSG00000009566.13	ENST00000373228.5	995	11	1487	2604	1486	-2604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGCTGGGGACTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	32581248	32577929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32578047_32581201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014161	chr2	-	166	2	ISM	ENSMUSG00000009566.13	ENST00000373228.5	995	11	19	7137	18	-7137	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGCAATCCAGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	32582716	32582462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32582517_32582604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014162	chr2	-	261	2	ISM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	31	10018	31	-7313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGATGTACCTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	32584166	32582638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32582734_32584000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014163	chr2	-	560	1	ISM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	4787	0	4270	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	32598009	32597449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32597400_32598000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014164	chr2	-	578	2	ISM	ENSMUSG00000009555.17	ENSMUST00000120105.8	1565	7	2651	418	2651	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACATGATGGGACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	32599628	32597873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32598302_32599478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014165	chr2	+	1469	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	67	0	56	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	32647312	32652256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014166	chr2	+	487	3	FSM	ENSMUSG00000053746.9	ENST00000423807.5	485	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTCAGGCCTCTAATAC	NA	NA	NA	NA	NA	NA	NA	NA	32666314	32667299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_32666536_32666718_32666819_32667133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014167	chr2	+	409	3	NNC	ENSMUSG00000053746.9	novel	485	3	NA	NA	72	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAGGCCTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	32666386	32667298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_32666536_32666723_32666819_32667133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014168	chr2	-	1286	7	ISM	ENSMUSG00000038987.9	ENST00000614677.1	1601	8	2910	0	2910	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCCAGAACACGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	32671502	32667859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32668030_32668128_32668393_32668947_32669110_32669301_32669433_32669720_32669989_32670653_32670808_32671365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014169	chr2	-	1469	1	ISM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	58175	0	58132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGAGCTTCTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	32679082	32677613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32677600_32679100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014170	chr2	-	1637	2	ISM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	51073	556	51030	-197	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATGTGGGGTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	32686184	32678169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32679650_32686027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014171	chr2	+	1578	3	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	46765	443	46765	-443	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGGCCTCTGCTCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	32812890	32814823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32812976_32813058_32813171_32813442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014172	chr2	+	1420	1	ISM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	47721	0	47721	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	32813846	32815266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_32813800_32815300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014173	chr2	-	276	2	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	31458	-1	31458	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACAGCACCTACCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	32818145	32816786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32816914_32817996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014174	chr2	-	362	3	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	29885	1208	29885	-1208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGGGGAGACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	32819718	32817995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32818143_32818663_32818746_32819585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014175	chr2	-	342	4	ISM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	19250	8395	19250	-8395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTATGTGAGGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	32830353	32825182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32825261_32826447_32826523_32828808_32828897_32830252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014176	chr2	-	323	3	NNC	ENSMUSG00000026792.17	novel	2106	23	NA	NA	8405	-19117	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCACAGCCACAAGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	32841198	32835904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_32836003_32837802_32837934_32841104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014177	chr2	-	330	3	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	6104	21031	6104	-21031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCTGAATGGCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	32843499	32837818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32837934_32841104_32841196_32843375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014178	chr2	-	409	2	ISM	ENSMUSG00000026792.17	ENST00000675141.1	2493	24	65	32747	65	-32747	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTAAGGCTCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	32851373	32849534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_32849626_32851055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014179	chr2	+	1180	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	62	0	62	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAATTGTTGGGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	32851632	32854508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014180	chr2	+	3334	5	FSM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCACACTGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	33106085	33137729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_33106466_33118186_33119045_33132211_33132406_33133690_33133962_33136098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014181	chr2	-	338	1	ISM	ENSMUSG00000038765.15	ENSMUST00000041730.12	4887	8	75966	3340	75869	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCGTTCTTTCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33454654	33454316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_33454300_33454700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014182	chr2	-	504	3	ISM	ENSMUSG00000038765.15	ENST00000373474.9	2070	8	74371	219	73772	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTGCCCTCCCCTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	33456751	33454535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_33454806_33455072_33455238_33456682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014183	chr2	+	312	2	Antisense	novelGene_ENSMUSG00000038765.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACAGTGAATGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33454657	33455239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_33454808_33455077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014184	chr2	-	304	3	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	73547	533	73547	-533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTATGGTAAGCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	33456976	33455080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_33455238_33456682_33456750_33456896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014185	chr2	-	311	3	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	73181	2152	73181	-2152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGGCTGGGCCAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	33457342	33456699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_33456750_33456896_33456975_33457159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014186	chr2	-	489	3	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	71229	2353	71229	-2353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGAGAGGTCACGACT	NA	NA	NA	NA	NA	NA	NA	NA	33459294	33456900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_33456975_33457159_33457342_33459061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014187	chr2	-	470	3	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	821	2759	821	-2759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGGCAGGGCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	33529702	33457306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_33457342_33459061_33459295_33529500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014188	chr2	-	579	3	ISM	ENSMUSG00000038765.15	ENSMUST00000239476.2	1219	8	-244	4669	-147	-4669	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCACTTGGGCTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	33530767	33459216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_33459295_33529500_33529688_33530453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014189	chr2	+	245	1	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34396101	34396346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr2_+_34396100_34396300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014190	chr2	+	1494	3	ISM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	165438	230	165438	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAATGCCTCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34487474	34514732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34487573_34509856_34509955_34513434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014191	chr2	+	1288	1	ISM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	216479	0	191637	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34513673	34514961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34513700_34515000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014192	chr2	+	635	3	ISM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	1	4748	1	-3732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTTTCTCATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	34661982	34662811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34662159_34662240_34662459_34662570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014193	chr2	+	703	4	ISM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	132	2598	132	-2598	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATGGGACTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	34662238	34663945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014194	chr2	+	826	4	ISM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	521	2104	521	-2104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGCTAATGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	34662627	34664439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34662803_34663181_34663320_34663832_34663946_34664039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014195	chr2	+	708	3	ISM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	1763	1756	1763	-1756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTATCACTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34663869	34664787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34663946_34664039_34664431_34664546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014196	chr2	+	633	3	ISM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	2101	1294	2101	-1294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACGTTCACAAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	34664207	34665249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34664431_34664546_34664785_34665077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014197	chr2	+	283	2	ISM	ENSMUSG00000026864.14	ENST00000680272.1	2540	8	2195	1770	2167	-1757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGTTATCACTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34664273	34664786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34664431_34664660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014198	chr2	+	140	2	NNC	ENSMUSG00000026864.14	novel	2540	8	NA	NA	2263	-1798	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCAGGCTGGTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	34664369	34664745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_34664431_34664666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014199	chr2	+	867	3	ISM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	2439	521	2439	-521	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACTAGAAGAAATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	34664545	34666022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34664785_34665077_34665246_34665562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014200	chr2	+	169	1	ISM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	4406	1003	4281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTCGGTGGGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	34666387	34666556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_34666400_34666600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014201	chr2	+	491	1	Genic_Genomic	ENSMUSG00000026864.14	novel	NA	NA	NA	NA	4965	3	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTGCAACTCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	34667071	34667562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_34667100_34667600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014202	chr2	-	551	1	ISM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	21806	0	19330	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAGTCACACACAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34668118	34667567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34667600_34668100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014203	chr2	-	1314	6	NNC	ENSMUSG00000070953.14	novel	1198	7	NA	NA	2106	175	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTACATAGTGAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	34685342	34669048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675788_34680514_34680668_34685183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014204	chr2	-	532	1	Genic_Genomic	ENSMUSG00000035949.16	novel	NA	NA	NA	NA	17473	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGAGTCTGCTGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	34695720	34695188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_34695200_34695700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014205	chr2	-	1492	6	FSM	ENSMUSG00000035949.16	ENSMUST00000113078.8	1872	6	333	47	333	-44	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCATAAAATCACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	34712860	34695396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014206	chr2	-	541	2	ISM	ENSMUSG00000035949.16	ENSMUST00000113075.8	2260	7	156	16358	26	-16358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTGCCAGAGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	34716057	34712622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34713080_34715973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014207	chr2	-	2092	1	Genic_Genomic	ENSMUSG00000026869.13	novel	NA	NA	NA	NA	19100	3	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAGAAAGCTAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34741834	34739742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_34739700_34741800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014208	chr2	-	2482	4	ISM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	13131	1063	13091	-1063	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGACAGGGCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	34747843	34740808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014209	chr2	-	276	1	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	18072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTCCACCTAAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	34742862	34742586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_34742600_34742900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014210	chr2	-	447	3	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	10148	3873	10146	-3873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACACGGGGAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	34750788	34746459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34746570_34747649_34747842_34750643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014211	chr2	-	444	3	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	7357	5065	7355	-5065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGTGTGACTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	34753579	34747651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34747842_34750643_34750787_34753468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014212	chr2	-	371	3	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	4826	8056	4824	5421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCAGCTCTTCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	34756110	34750642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34750787_34753468_34753579_34755993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014213	chr2	-	543	4	ISM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	1	10882	1	2595	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGAGTTGGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	34760935	34753468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34753579_34755993_34756108_34756904_34757050_34760761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014214	chr2	-	223	2	FSM	ENSMUSG00000026869.13	ENST00000625444.1	217	2	0	-6	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGCTGTTGAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	34760934	34756057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_34756108_34760761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014215	chr2	-	910	1	Genic_Genomic	ENSMUSG00000026873.10	novel	NA	NA	NA	NA	19311	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGTGTCCTTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	34784677	34783767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_34783800_34784700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014216	chr2	-	2379	2	ISM	ENSMUSG00000026875.15	ENSMUST00000172159.8	3436	7	12722	7	12695	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGATTTGTACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	34835453	34831768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_34834104_34835409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014217	chr2	-	2720	7	ISM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	8441	0	8297	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35082691	35070216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014218	chr2	-	136	1	Genic_Genomic	ENSMUSG00000026880.12	novel	NA	NA	NA	NA	22856	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGAGTCTTGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35204132	35203996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_35204000_35204100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014219	chr2	-	232	2	ISM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	16521	1963	16521	-1963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACTATCGCTGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	35210467	35205960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35206068_35210342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014220	chr2	-	215	2	ISM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	15403	6356	15403	-6356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGGCCAAGGTAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	35211585	35210353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35210478_35211494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014221	chr2	-	193	2	ISM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	13229	7592	13229	-7592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTGGCACAAACTACC	NA	NA	NA	NA	NA	NA	NA	NA	35213759	35211589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35211699_35213675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014222	chr2	-	160	2	ISM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	11588	9676	11588	-9676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTCTCACTATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	35215400	35213673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35213759_35215325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014223	chr2	-	179	2	ISM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	10451	11327	10451	-11327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTACTCGACTGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35216537	35215324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35215399_35216432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014224	chr2	-	214	2	ISM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	4	12439	4	-12439	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAAAGAGCATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	35226984	35216436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35216537_35226870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014225	chr2	-	866	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTATTATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	35939421	35926335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014226	chr2	-	848	4	NNC	ENSMUSG00000026895.8	novel	861	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	35939416	35926337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_35926654_35929723_35929890_35934361_35934515_35939203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014227	chr2	-	856	4	NNC	ENSMUSG00000026895.8	novel	861	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	35939417	35926337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_35926654_35929723_35929886_35934361_35934526_35939203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014228	chr2	-	915	1	ISM	ENSMUSG00000026890.20	ENSMUST00000112961.10	3292	9	21191	2	15690	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATGCCATGGAATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	35972881	35971966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35972000_35972900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014229	chr2	-	914	3	ISM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	7455	1452	7455	278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCAGGGATGGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	35981116	35973420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_35974088_35977379_35977484_35980973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014230	chr2	-	898	1	ISM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	19797	0	19635	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36006988	36006090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_36006100_36007000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014231	chr2	-	1028	3	ISM	ENSMUSG00000026889.13	ENSMUST00000122456.8	781	5	13675	-508	13675	508	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCATGGTTTTGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	36012948	36007129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_36007987_36010824_36010911_36012863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014232	chr2	+	632	5	NNC	ENSMUSG00000026887.10	novel	663	5	NA	NA	23	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCACAGCCGGACACCG	NA	NA	NA	NA	NA	NA	NA	NA	36031492	36079170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_36031670_36037914_36038075_36043604_36043724_36049610_36049703_36079086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014233	chr2	+	541	4	ISM	ENSMUSG00000026887.10	ENST00000394315.3	650	5	26	29467	26	-29467	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTGGCTGAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	36031495	36049702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36031670_36037914_36038071_36043604_36043724_36049610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014234	chr2	+	450	4	ISM	ENSMUSG00000026887.10	ENST00000394315.3	650	5	6446	-1	6446	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCACAGCCGGACACCG	NA	NA	NA	NA	NA	NA	NA	NA	36037915	36079170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36038071_36043604_36043724_36049610_36049703_36079086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014235	chr2	+	1659	2	ISM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	40726	74	35657	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACATGATGTAAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	36067126	36080585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36067287_36079086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014236	chr2	+	1552	1	ISM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	52707	0	47638	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCAGGGTCTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36079107	36080659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36079100_36080700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014237	chr2	+	195	1	NIC	ENSMUSG00000087187.2	novel	476	4	NA	NA	5915	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGGCAGCTGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	36112751	36112946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_36112800_36112900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014238	chr2	+	360	3	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	1	14945	1	-14062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGACTCCAGTCCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	36120438	36127339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36120582_36120679_36120776_36127218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014239	chr2	+	354	3	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	242	14481	242	-13598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGTGGGGCTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	36120679	36127803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36120776_36127218_36127336_36127662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014240	chr2	+	416	3	ISM	ENSMUSG00000047250.14	ENST00000540753.6	1631	9	-8	13281	-3	-13281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTGTGGCAAGGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	36127212	36128120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36127336_36127662_36127804_36127968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014241	chr2	+	471	3	ISM	ENSMUSG00000047250.14	ENST00000540753.6	1631	9	440	10610	440	-10610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGTGGGACAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36127660	36130791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36127804_36127968_36128113_36130607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014242	chr2	+	393	3	ISM	ENSMUSG00000047250.14	ENST00000540753.6	1631	9	775	10425	775	-10425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGGAGGGGACAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36127995	36130976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36128113_36130607_36130790_36130882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014243	chr2	+	516	3	ISM	ENSMUSG00000047250.14	ENST00000540753.6	1631	9	3385	8379	3385	-8379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACATGCCCCGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	36130605	36133022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36130790_36130882_36130967_36132774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014244	chr2	+	316	3	NNC	ENSMUSG00000047250.14	novel	1631	9	NA	NA	3531	-8426	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATGATGAGCAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36130751	36132975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_36130790_36130882_36130960_36132774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014245	chr2	+	687	3	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	12333	3028	5550	-2145	internal_fragment	TRUE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTGCTGCATCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	36132770	36139256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36133022_36135055_36135343_36139107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014246	chr2	+	585	3	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	14609	1136	7826	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAAGGGCCTCCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	36135046	36141148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36135343_36139107_36139256_36141007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014247	chr2	+	632	3	ISM	ENSMUSG00000047250.14	ENST00000540753.6	1631	9	7832	89	7832	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGAGATGACGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	36135052	36141312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36135232_36139107_36139256_36141007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014248	chr2	+	174	1	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	20790	883	14007	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATGAAGACAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	36141227	36141401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36141200_36141400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014249	chr2	+	335	1	ISM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	21512	0	14729	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGCTATGTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	36141949	36142284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_36141900_36142300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014250	chr2	-	656	1	ISM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	8603	0	8524	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGTATATTAGATATTT	NA	NA	NA	NA	NA	NA	NA	NA	37240741	37240085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_37240100_37240700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014251	chr2	-	821	2	ISM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	3433	1159	3433	-1159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTACAGCTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	37245832	37241758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_37242395_37245647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014252	chr2	+	217	2	ISM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	0	28687	0	-27851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCTGGACAGGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	38440566	38447927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_38440684_38447827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014253	chr2	+	1588	6	ISM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	18289	-1	18289	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATTCCAGTGGGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	38458855	38476615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291_38476210_38476374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014254	chr2	-	916	7	ISM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	634	-1	634	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGTTGTAATGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	38533465	38478046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014255	chr2	+	218	1	Genic_Genomic	ENSMUSG00000026749.12	novel	NA	NA	NA	NA	43849	15	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAACACAGAAAGTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	38484415	38484633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_38484400_38484600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014256	chr2	-	242	1	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	56710	4190	56710	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAATGTTACCGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38617817	38617575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_38617600_38617800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014257	chr2	-	592	3	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	53342	4231	53342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCAGATGCATTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	38621185	38617616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_38617928_38619494_38619648_38621057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014258	chr2	-	745	4	ISM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	43903	6127	43903	-1896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCCGATACATCGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38630624	38619512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_38619648_38621057_38621180_38628898_38629154_38630391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014259	chr2	-	593	3	ISM	ENSMUSG00000063972.14	ENST00000344523.8	1831	10	183423	11326	41552	-11326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCACAGCCAAGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	38632975	38628942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_38629154_38630391_38630617_38632818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014260	chr2	-	596	4	ISM	ENSMUSG00000063972.14	ENST00000344523.8	1831	10	165957	12858	24086	-12858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGTCCTACAGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	38650441	38630474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_38630617_38632818_38632974_38638847_38638904_38650198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014261	chr2	-	733	5	ISM	ENSMUSG00000063972.14	ENST00000344523.8	1831	10	11	15223	11	-15223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTCCACACTATCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	38816387	38632839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_38632974_38638847_38638904_38650198_38650442_38775207_38775250_38816129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014262	chr2	-	314	3	ISM	ENSMUSG00000063972.14	ENST00000416460.6	1875	10	207	32659	23	-32618	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCAAGTGTCTCCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	38816206	38650234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_38650430_38775207_38775250_38816129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014263	chr2	-	948	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCATGTTTTACATTG	NA	NA	NA	NA	NA	NA	NA	NA	38895636	38891589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014264	chr2	-	941	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895637	38891591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_38891772_38894118_38894201_38894743_38894881_38895095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014265	chr2	-	794	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	146	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895490	38891591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_38891778_38894118_38894201_38894743_38894875_38895095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014266	chr2	-	900	4	NNC	ENSMUSG00000062997.7	novel	946	4	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895595	38891591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_38891778_38894118_38894196_38894743_38894881_38895095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014267	chr2	-	435	3	FSM	ENSMUSG00000062997.7	ENST00000373570.8	435	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAACGACAATAAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	38894880	38891625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_38891803_38894079_38894201_38894743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014268	chr2	-	178	1	NIC	ENSMUSG00000062997.7	novel	946	4	NA	NA	3078	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAACGACAATAAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	38891803	38891625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_38891600_38891800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014269	chr2	-	496	1	ISM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	31602	0	31471	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCTCATGCAGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	39084861	39084365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_39084400_39084900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014270	chr2	-	660	2	ISM	ENSMUSG00000026753.6	ENSMUST00000204701.3	1495	6	26461	350	26461	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTTGAGAAGACTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	39089871	39087138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_39087602_39089674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014271	chr2	-	343	1	FSM	ENSMUSG00000083240.4	ENSMUST00000118708.2	357	1	14	0	14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAAGTGCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	40017858	40017515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_40017500_40017900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014272	chr2	+	574	1	FSM	ENSMUSG00000082536.2	ENSMUST00000118928.2	1365	1	1129	-338	1129	338	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGATCGCAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	40446892	40447466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_40446900_40447500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014273	chr2	+	487	2	Genic_Genomic	ENSMUSG00000082536.2	novel	1365	1	NA	NA	1178	337	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGATCGCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	40446941	40447465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_40447305_40447341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014274	chr2	-	898	1	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1364637	0	31195	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGTGTTTGGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40486153	40485255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_40485300_40486200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014275	chr2	-	962	2	ISM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	1362311	924	28869	-634	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCAGCCGAGAGCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	40488479	40486179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_40487087_40488424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014276	chr2	-	819	1	ISM	ENSMUSG00000036890.14	ENSMUST00000112810.8	2564	11	296392	0	191207	0	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGCGTCTAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	44455242	44454423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44454400_44455200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014277	chr2	-	1348	5	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	190232	356	121118	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATGATTCTCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44525331	44454789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44455547_44460430_44460523_44461224_44461296_44481892_44482003_44525013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014278	chr2	-	729	2	ISM	ENSMUSG00000036890.14	ENSMUST00000049051.13	2197	8	185912	498	185912	-491	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAACTAATTGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44460537	44454924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44455547_44460430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014279	chr2	-	304	3	ISM	ENSMUSG00000036890.14	ENSMUST00000049051.13	2197	8	180847	6011	180847	-6004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGGTAGCTATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44465602	44460437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44460523_44461224_44461296_44465454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014280	chr2	-	820	5	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	69112	6813	-2	-6813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATCCTGAGATCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	44646451	44461246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44461296_44481892_44482003_44525013_44525329_44642058_44642233_44646279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014281	chr2	-	432	3	ISM	ENSMUSG00000036890.14	ENST00000409298.5	2074	8	73330	11019	4216	-11019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTCTCGTCTAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	44642233	44465452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44465600_44481892_44482003_44642058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014282	chr2	-	303	3	NNC	ENSMUSG00000036890.14	novel	2197	8	NA	NA	4308	-11048	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATGAATTCTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44642141	44465481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_44465600_44481892_44482003_44642066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014283	chr2	-	828	4	ISM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	3	70607	3	-70607	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACATTACATGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	44715560	44525040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44525329_44642058_44642233_44646279_44646448_44715362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014284	chr2	-	1784	1	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	39036	0	39036	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTAAGTATTTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44875018	44873234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44873200_44875000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014285	chr2	-	3528	4	ISM	ENSMUSG00000026872.19	ENST00000636026.2	5185	11	115500	-1	26260	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAGCATTTATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44887794	44877463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44878891_44879002_44879166_44884490_44884672_44886037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014286	chr2	-	2066	3	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	27299	4764	27299	347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGCATGTGTGAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	44886755	44877998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44879166_44884490_44884672_44886037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014287	chr2	-	2156	4	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	21458	13010	21458	-7791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACACCCCTCTTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	44892596	44886244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_44888008_44888895_44889005_44891611_44891827_44892527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014288	chr2	+	644	2	ISM	ENSMUSG00000052248.18	ENST00000609842.5	803	3	1	263	1	-263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAACTGATCTCTTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	45000950	45003006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_45001315_45002726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014289	chr2	+	438	2	ISM	ENSMUSG00000052248.18	ENSMUST00000231986.2	443	4	227	514	227	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTGGAAGAAATGAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	45002726	45003269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_45003006_45003110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014290	chr2	-	553	2	FSM	ENSMUSG00000026872.19	ENST00000475115.3	535	2	0	-18	0	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTGTGGCCAAATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	45007469	45006418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_45006714_45007211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014291	chr2	+	517	2	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGCAAGTTAGATGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	45006421	45007438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr2_+_45006707_45007206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014292	chr2	+	592	3	FSM	ENSMUSG00000100135.2	ENST00000413525.2	586	3	-1	-5	-1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTGCTATTCCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45006793	45058478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_45007029_45046934_45047073_45058259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014293	chr2	-	207	1	Genic_Genomic	ENSMUSG00000086644.2	novel	NA	NA	NA	NA	22971	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTGGCCTGGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	46309751	46309544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_46309500_46309800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014294	chr2	+	1102	3	ISM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	82718	-1	82718	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCCATGTTTTATAACA	NA	NA	NA	NA	NA	NA	NA	NA	48786989	48790443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_48787123_48788489_48788621_48789605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014295	chr2	+	838	1	ISM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	85485	2838	85334	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCCATGTTTTATAACA	NA	NA	NA	NA	NA	NA	NA	NA	48789605	48790443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_48789600_48790400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014296	chr2	+	576	1	ISM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	88583	2	88432	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCACATGCAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48792703	48793279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_48792700_48793300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014297	chr2	-	1356	1	ISM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	45097	0	45055	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48794191	48792835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_48792800_48794200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014298	chr2	-	1326	2	ISM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	39942	1519	39900	1067	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATCTTAAATATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	48799346	48794354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_48795612_48799277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014299	chr2	+	1049	5	FSM	ENSMUSG00000026765.13	ENST00000409876.5	1049	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCATTACCGTAATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	49756673	49838033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_49756739_49832456_49832609_49833533_49833633_49836091_49836223_49837431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014300	chr2	-	1102	5	ISM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	1451	-1	1451	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTATTTTTTCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50181514	50169936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_50170415_50171114_50171229_50177751_50177938_50178938_50179045_50181296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014301	chr2	-	602	2	ISM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	11726	0	11726	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATTATTTTTTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	50171239	50169937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_50170415_50171114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014302	chr2	-	627	4	ISM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	28	7814	28	-7814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGACACATAATTAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	50182937	50177751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_50177938_50178938_50179045_50181296_50181515_50182820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014303	chr2	-	1162	1	ISM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	17512	0	17511	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	51021611	51020449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_51020400_51021600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014304	chr2	-	1383	3	ISM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	11866	970	11865	427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTCAAATAAAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	51027257	51021419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_51022558_51024094_51024230_51027147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014305	chr2	+	2121	4	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	35306	9728	35306	-9728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATAAAGAGTGTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	51998451	52001755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_51998604_51999203_51999288_51999362_51999415_51999922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014306	chr2	+	1880	2	ISM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	38062	5149	38062	-5149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGATCTCATTCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	52001207	52006334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_52003013_52006259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014307	chr2	-	647	1	ISM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	26304	0	26296	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTTGGGGGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	52288609	52287962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52288000_52288600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014308	chr2	-	666	2	ISM	ENSMUSG00000036093.8	ENST00000428992.2	736	6	19833	-298	19833	298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTGTGCTCTAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	52295072	52291933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52292445_52294917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014309	chr2	-	216	1	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	22460	2	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGCGCTCTCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	52292445	52292229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_52292200_52292400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014310	chr2	-	388	3	ISM	ENSMUSG00000036093.8	ENST00000428992.2	736	6	8680	2684	8680	-2684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTTGTCTCATTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	52306225	52294915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52295070_52302073_52302158_52306075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014311	chr2	-	291	3	ISM	ENSMUSG00000036093.8	ENST00000428992.2	736	6	-1	13841	-1	-13841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCTAATGCTAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	52314906	52306072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52306224_52306647_52306709_52314827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014312	chr2	-	3039	1	NIC	ENSMUSG00000017412.16	novel	7981	14	NA	NA	121902	1	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTTTTATGATATATAA	NA	NA	NA	NA	NA	NA	NA	NA	52324763	52321724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_52321700_52324800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014313	chr2	-	2075	4	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	104631	-948	104631	-412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGACCCTTTGAAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	52342034	52323122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014314	chr2	-	481	3	ISM	ENSMUSG00000017412.16	ENST00000636380.1	1782	9	106522	416	104629	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGACCACTACCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	52342036	52324622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52324762_52326897_52327084_52341880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014315	chr2	-	371	3	ISM	ENSMUSG00000017412.16	ENST00000636380.1	1782	9	91234	2727	89341	-2727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACCATATCCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	52357324	52326933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52327084_52341880_52342033_52357255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014316	chr2	-	281	3	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	100942	15970	100942	-15834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCCAGAGGAAAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	52345723	52340040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52340058_52341880_52342033_52345611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014317	chr2	-	318	3	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	91983	17815	91983	-17679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGTAATCAGCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	52354682	52341885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52342033_52345611_52345722_52354621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014318	chr2	-	324	3	ISM	ENSMUSG00000017412.16	ENST00000636380.1	1782	9	88937	17712	87044	-17712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATCATCGTCCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	52359621	52341918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52342033_52357255_52357333_52359488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014319	chr2	-	238	4	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	90738	21575	90738	-21439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTGAACGTTCCAACAC	NA	NA	NA	NA	NA	NA	NA	NA	52355927	52345645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52345722_52354621_52354681_52355609_52355691_52355905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014320	chr2	-	327	3	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	81665	33192	81665	-33056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGGTGAGGGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	52365000	52357262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52357333_52359488_52359620_52364874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014321	chr2	-	375	3	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	78842	35417	78842	-35281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACACCCCATCTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	52367823	52359487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52359620_52364874_52364998_52367703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014322	chr2	-	346	3	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	292	40861	292	-40725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTCCCAGCACAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	52446373	52364931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52364998_52367703_52367824_52446213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014323	chr2	-	314	2	ISM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	12	122140	12	-122004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGGGGTTTGCCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	52446653	52446210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52446374_52446502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014324	chr2	-	417	2	ISM	ENSMUSG00000017412.16	ENST00000636380.1	1782	9	22	122006	13	-122006	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGGGGTTTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	52448536	52446212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52446374_52448280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014325	chr2	+	622	1	FSM	ENSMUSG00000025201.8	ENSMUST00000183232.2	432	1	258	-448	258	448	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTTGTGTCTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	52510023	52510645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_52510000_52510600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014326	chr2	-	1588	1	Genic_Genomic	ENSMUSG00000055371.18	novel	NA	NA	NA	NA	48951	2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTTGAGAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	52583261	52581673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_52581700_52583300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014327	chr2	-	1711	2	ISM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	42027	1732	42027	-1732	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTTAAACTTTATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52590185	52583407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_52584950_52590016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014328	chr2	-	349	1	ISM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	52461	237	52364	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGAGTAATAGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	53028835	53028486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_53028500_53028800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014329	chr2	-	417	2	ISM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	50640	466	50640	237	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATGGATTAAAAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	53030559	53028952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_53029283_53030472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014330	chr2	-	395	4	ISM	ENSMUSG00000061136.17	ENSMUST00000209364.3	3251	26	38726	11478	38211	-11478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGGGAATCTTTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	53042988	53040667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_53040784_53041690_53041842_53042457_53042567_53042969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014331	chr2	+	420	3	ISM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	147	16224	147	-16224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTTGAACCAGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	53082246	53093008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_53082535_53084295_53084350_53092930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014332	chr2	+	416	2	ISM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	10829	1645	10829	-1645	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTATCAGTTACAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	53092928	53107587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_53093064_53107306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014333	chr2	+	339	1	Genic_Genomic	ENSMUSG00000026960.7	novel	NA	NA	NA	NA	26795	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTAATGGCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	53108894	53109233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_53108900_53109200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014334	chr2	-	229	1	ISM	ENSMUSG00000026826.14	ENSMUST00000028166.9	3568	8	7980	0	6014	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTATTTCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	56997070	56996841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_56996800_56997100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014335	chr2	-	326	2	ISM	ENSMUSG00000026826.14	ENSMUST00000112627.2	2400	7	4338	762	4338	-762	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCACACAGGGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	56998746	56998272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_56998425_56998572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014336	chr2	-	375	2	ISM	ENSMUSG00000026826.14	ENSMUST00000112627.2	2400	7	3800	1076	3800	-1076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTATGGTCACAGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	56999284	56998586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_56998752_56999074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014337	chr2	-	339	2	ISM	ENSMUSG00000026826.14	ENSMUST00000112627.2	2400	7	2793	1594	2793	-1594	internal_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTATTTGTTCTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	57000291	56999104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_56999278_57000125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014338	chr2	-	291	2	ISM	ENSMUSG00000026826.14	ENSMUST00000112627.2	2400	7	2308	2616	2308	-2616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGAAGCCGGTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	57000776	57000126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_57000290_57000648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014339	chr2	-	324	2	ISM	ENSMUSG00000026826.14	ENSMUST00000112627.2	2400	7	1300	3141	1300	-3141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAGGTCGAGGCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	57001784	57000651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_57000779_57001587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014340	chr2	-	434	3	ISM	ENSMUSG00000026826.14	ENST00000339562.9	3476	8	125	5404	125	-4740	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACAGGCTACGACGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	57004834	57002250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_57002454_57002962_57003085_57004725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014341	chr2	-	434	1	Genic_Genomic	ENSMUSG00000084938.2	novel	NA	NA	NA	NA	53845	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGGTTGTCTCTTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	57017921	57017487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_57017500_57017900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014342	chr2	+	651	1	ISM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	132391	0	131687	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGGCATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	57260080	57260731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_57260100_57260700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014343	chr2	-	976	1	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	68859	4	68859	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58337425	58336449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_58336400_58337400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014344	chr2	-	1969	5	ISM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	47631	4	47631	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATTTTCCTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58358653	58336449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014345	chr2	+	171	2	FSM	ENSMUSG00000026991.21	ENST00000629219.1	162	2	-7	-2	-7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGAGAGCTGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	59045019	59045309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_59045159_59045277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014346	chr2	+	145	2	NNC	ENSMUSG00000026991.21	novel	162	2	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATGGAGAGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59045031	59045307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_59045147_59045277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014347	chr2	-	156	2	Antisense	novelGene_ENSMUSG00000026991.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTCCTCCTGCAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	59045307	59045031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_-_59045166_59045285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014348	chr2	+	117	1	NIC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	32	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGATGACATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	59045058	59045175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_59045100_59045200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014349	chr2	-	130	1	ISM	ENSMUSG00000026988.16	ENSMUST00000028368.14	2072	11	30091	0	26038	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59682837	59682707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_59682700_59682800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014350	chr2	-	179	2	ISM	ENSMUSG00000026988.16	ENSMUST00000028368.14	2072	11	23909	485	19856	-485	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGATGGCCATCAACCG	NA	NA	NA	NA	NA	NA	NA	NA	59689019	59683192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_59683306_59688953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014351	chr2	-	1265	7	NNC	ENSMUSG00000026988.16	novel	1264	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGTGCGCGCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	59708875	59688953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_59689095_59691904_59692082_59692959_59693110_59703533_59703654_59704582_59704673_59707010_59707196_59708473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014352	chr2	-	268	2	ISM	ENSMUSG00000026988.16	ENSMUST00000102751.9	1526	11	31	23212	31	-16836	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCCGTACTCCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	59712860	59708742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_59708895_59712744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014353	chr2	-	468	2	ISM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	14526	33413	14526	-33413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCGATCCAAACGGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	59799648	59798985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_59799367_59799561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014354	chr2	-	441	3	ISM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	5126	34105	5126	-34105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGTGACTCAGACGAT	NA	NA	NA	NA	NA	NA	NA	NA	59809048	59799677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_59799763_59807702_59807897_59808886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014355	chr2	+	949	3	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	4979	13410	4979	-13410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACTTAGAAATAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	60060091	60064891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_60060224_60062543_60062712_60064242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014356	chr2	+	710	2	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	9556	11167	9556	-11167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTATGTAGAATTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	60064668	60067134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_60065342_60067097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014357	chr2	+	669	2	ISM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	20443	-552	20443	536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATTTGAATTCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	60075555	60078853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_60075605_60078233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014358	chr2	+	684	1	ISM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	38641	0	23759	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAACTTTTTCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	60078871	60079555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_60078900_60079600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014359	chr2	-	172	1	NIC	ENSMUSG00000026971.16	novel	4806	15	NA	NA	68355	2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTCAGGAGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	60435652	60435480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_60435500_60435700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014360	chr2	-	835	4	ISM	ENSMUSG00000026971.16	ENST00000409967.6	2156	12	45207	0	45200	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGACTCAGGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	60458807	60435482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60435651_60441710_60441831_60458091_60458510_60458678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014361	chr2	-	345	3	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	53323	6228	53323	-6228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGCTTGTGTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	60450684	60441710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60441831_60446988_60447084_60450554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014362	chr2	-	270	2	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	45773	15168	45773	-15168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTGGCAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	60458234	60450650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60450778_60458091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014363	chr2	-	742	4	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	23591	22609	23591	-22609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGATGGGCTCCTACG	NA	NA	NA	NA	NA	NA	NA	NA	60480416	60458091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60458510_60458678_60458814_60464923_60465014_60480317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014364	chr2	-	726	5	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	5164	29441	5164	-29441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTATTTCCCCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	60498843	60464923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60465014_60480317_60480414_60483485_60483648_60484982_60485149_60498631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014365	chr2	-	235	2	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	4444	63279	4444	-63279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTCCCGGCTGGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	60499563	60498761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60498879_60499445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014366	chr2	-	241	2	ISM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	127	64062	127	-64062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCCTTCAAAATAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60503880	60499544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60499651_60503745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014367	chr2	-	1221	1	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	211779	0	130025	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCCTGTCGGTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60581757	60580536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60580500_60581800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014368	chr2	-	1345	3	ISM	ENSMUSG00000026970.17	ENSMUST00000164147.8	2543	15	125985	-192	125985	192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTTCAAACCTAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	60585797	60582104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60583327_60584073_60584159_60585759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014369	chr2	-	880	1	ISM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	210360	1760	128606	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTAGTGTAGGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	60583176	60582296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_60582300_60583200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014370	chr2	+	1044	2	ISM	ENSMUSG00000064289.16	ENSMUST00000112501.9	2227	9	56640	301	56601	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTGAATTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	61480080	61484214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_61480633_61483722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014371	chr2	+	742	1	ISM	ENSMUSG00000064289.16	ENSMUST00000112502.8	2016	8	74845	0	60294	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTCTGATGGGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	61483773	61484515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_61483800_61484500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014372	chr2	+	635	6	ISM	ENSMUSG00000026914.16	ENST00000427142.1	711	7	348	-5	348	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTGTTTCTTCACAAT	NA	NA	NA	NA	NA	NA	NA	NA	61591330	61615909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_61591429_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014373	chr2	+	607	4	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	221597	37916	221597	-37916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTGGGTTTAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	62098525	62117307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_62098619_62099004_62099251_62112217_62112324_62117145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014374	chr2	+	659	2	ISM	ENSMUSG00000026904.18	ENST00000446997.6	5490	27	270933	1385	270888	462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCTTCTTAAAAGACATA	NA	NA	NA	NA	NA	NA	NA	NA	62147816	62155685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_62147859_62155068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014375	chr2	+	608	1	ISM	ENSMUSG00000026904.18	ENST00000375514.9	5662	27	279689	0	279563	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGTGTCTTATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	62156491	62157099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_62156500_62157100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014376	chr2	-	358	1	ISM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	80242	1559	54529	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATGGGTTATGTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	62162333	62161975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62162000_62162300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014377	chr2	-	411	3	ISM	ENSMUSG00000000394.16	ENST00000375497.3	628	4	3222	-4	3079	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCGGGCTGATTATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	62310915	62307163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62307306_62308898_62309061_62310808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014378	chr2	-	139	1	NIC	ENSMUSG00000000394.16	novel	1088	6	NA	NA	6688	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTCGGGCTGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	62307306	62307167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_62307200_62307300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014379	chr2	-	479	3	ISM	ENSMUSG00000000394.16	ENST00000375497.3	628	4	7	1735	7	-1735	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGTAAGAGTCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	62314130	62308902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62309061_62310808_62310909_62313909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014380	chr2	-	185	1	ISM	ENSMUSG00000000394.16	ENST00000375497.3	628	4	43	6742	43	-6742	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGGCACACTGTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	62314094	62313909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62313900_62314100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014381	chr2	-	240	1	NIC	ENSMUSG00000026896.15	novel	5470	16	NA	NA	47870	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTGTTTTCGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	62428438	62428198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_62428200_62428400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014382	chr2	-	522	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	46981	0	46981	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTTGTTTTCGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	62429327	62428199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62428433_62428522_62428614_62429129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014383	chr2	-	358	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	44409	929	44409	-929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCAGCAAGATCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	62431899	62429128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62429321_62431733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014384	chr2	-	315	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	42392	3534	42392	-3534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTCTTGGCCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	62433916	62431733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62431896_62433763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014385	chr2	-	412	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	40263	5563	40263	-5563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCCAGACCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	62436045	62433762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62433914_62435784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014386	chr2	-	482	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	39528	7619	39528	-7619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGCACAGCAGTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	62436780	62435818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62436045_62436524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014387	chr2	-	434	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	36661	8410	36661	-8410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGCAATGACCAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	62439647	62436609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62436801_62437316_62437441_62439528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014388	chr2	-	337	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	35304	11329	35304	-11329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAACAGTGTTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	62441004	62439528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62439646_62440784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014389	chr2	-	439	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	34041	12578	34041	-12578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGTTTGTGTATAATAG	NA	NA	NA	NA	NA	NA	NA	NA	62442267	62440777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62441003_62442053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014390	chr2	-	439	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	28476	13854	28476	-13854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGGAGTGATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	62447832	62442053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62442265_62447604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014391	chr2	-	642	3	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	6465	19402	6465	-19402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGCTCCTGTGCTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	62469843	62447601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62447829_62453736_62453912_62469603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014392	chr2	-	458	2	ISM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	262	41410	262	-41410	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAGTGTCAAACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	62476046	62469609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62469843_62475821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014393	chr2	-	986	3	ISM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	89464	-41	89464	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCTTTTGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	62618235	62594830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62595115_62607625_62608026_62617933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014394	chr2	-	814	3	ISM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	40073	12983	40073	8770	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGAGGCCCTATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	62667626	62607854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62608026_62617933_62618360_62667409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014395	chr2	-	998	3	ISM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	26597	23114	26597	-1275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGCCATTCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	62681102	62617985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62618360_62667409_62667625_62680693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014396	chr2	-	681	3	ISM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	-3	72658	-3	-50819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTTCTCAGATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	62707702	62667529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_62667625_62680693_62681123_62707545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014397	chr2	-	506	2	ISM	ENSMUSG00000059742.11	ENSMUST00000112454.8	3073	7	13	395773	4	-395687	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGGATCCAGCTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	63014618	63012397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_63012631_63014345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014398	chr2	-	739	3	FSM	ENSMUSG00000075324.14	ENST00000409634.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGAAACAGGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	63928360	63792905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_63793300_63927238_63927409_63928185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014399	chr2	-	474	1	ISM	ENSMUSG00000057182.16	ENSMUST00000066432.12	9560	27	106911	2990	106740	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATGAAGTTATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	65290925	65290451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_65290500_65290900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014400	chr2	-	463	2	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	102427	1348	102426	-1348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCATGATCTGCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	65295239	65291799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_65292082_65295058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014401	chr2	-	442	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	97123	7983	97122	-7983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTCAACCAGCAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	65300543	65298434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_65298549_65299355_65299410_65300269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014402	chr2	-	484	2	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	69690	35068	69689	-35068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCCAATAACACGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	65327976	65325519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_65325741_65327713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014403	chr2	-	467	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	58721	45954	58720	-45954	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATGACGGAGCAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	65338945	65336405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_65336600_65337490_65337624_65338805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014404	chr2	-	603	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	45426	54364	45425	-54364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCGCGGTCTGATGATCT	NA	NA	NA	NA	NA	NA	NA	NA	65352240	65344815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_65345107_65351166_65351374_65352135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014405	chr2	-	458	3	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	40734	64495	40733	-64495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTCGTTGCCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	65356932	65354946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_65355221_65356220_65356313_65356840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014406	chr2	-	495	2	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	19944	76328	19943	-76328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCTACTACGTCAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	65377722	65366779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_65367071_65377518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014407	chr2	-	837	1	ISM	ENSMUSG00000075316.12	ENSMUST00000100064.9	9840	27	150901	3135	84213	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGTAACTCTACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	66314395	66313558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_66313600_66314400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014408	chr2	-	1209	3	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	80182	347	80182	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTCTAAAGTGTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	66318426	66314111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_66314949_66317718_66317990_66318325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014409	chr2	-	1106	4	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	34845	25101	34845	-25101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAGTGAGCTGATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	66363763	66338865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_66339019_66345658_66345777_66356951_66357429_66363405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014410	chr2	-	840	3	ISM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	34117	43215	34117	-43215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCAGATAGTGACTACA	NA	NA	NA	NA	NA	NA	NA	NA	66364491	66356979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_66357429_66363405_66363763_66364457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014411	chr2	+	2000	3	FSM	ENSMUSG00000034780.7	ENST00000392690.3	4149	3	1900	249	1900	-249	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGTTACAAGGGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	67950103	67952781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_67950829_67951398_67951982_67952089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014412	chr2	+	820	2	NNC	ENSMUSG00000034780.7	novel	4149	3	NA	NA	2230	967	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGGTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	67950433	67951825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_67950827_67951398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014413	chr2	+	804	1	FSM	ENSMUSG00000034780.7	ENSMUST00000112346.3	4977	1	4170	3	4023	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCCGTTTTTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	67952226	67953030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_67952200_67953000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014414	chr2	-	808	1	ISM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	261016	0	261016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGTCTCCTCCATTTCG	NA	NA	NA	NA	NA	NA	NA	NA	68041596	68040788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_68040800_68041600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014415	chr2	+	744	7	ISM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	40102	-1	30990	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGGACACACAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	69006102	69019485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224_69014340_69015802_69015893_69019340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014416	chr2	-	1335	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	17	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69036521	69024238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014417	chr2	+	497	2	FSM	ENSMUSG00000005232.12	ENST00000421979.1	492	2	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTCGGAGCTGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	69050371	69057185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_69050595_69056911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014418	chr2	+	275	1	NIC	ENSMUSG00000005232.12	novel	1892	5	NA	NA	6538	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTCGGAGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	69056909	69057184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_69056900_69057200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014419	chr2	-	106	1	ISM	ENSMUSG00000027048.16	ENSMUST00000102710.10	4893	28	103428	799	90162	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGAGACCTTTACATA	NA	NA	NA	NA	NA	NA	NA	NA	69069530	69069424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69069400_69069500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014420	chr2	-	120	2	ISM	ENSMUSG00000027048.16	ENST00000650372.1	3966	27	83572	4393	83572	-4393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAAATCTTGCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	69076120	69073817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69073906_69076088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014421	chr2	-	151	2	ISM	ENSMUSG00000027048.16	ENST00000650372.1	3966	27	55263	26599	55263	-26599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCCTGGGCTGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	69104429	69096023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69096087_69104341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014422	chr2	-	161	2	ISM	ENSMUSG00000027048.16	ENST00000650372.1	3966	27	5429	69393	5429	-69393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGATACTTTCAAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	69154263	69138817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69138891_69154175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014423	chr2	-	644	3	ISM	ENSMUSG00000027070.15	ENST00000649046.1	15320	79	104629	54762	104629	27105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTATCTTTAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	69311665	69309442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69309686_69310359_69310564_69311468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014424	chr2	+	800	2	ISM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	521	9739	521	-9739	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGTGCTATGCTACGATC	NA	NA	NA	NA	NA	NA	NA	NA	69500984	69504835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69501651_69504701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014425	chr2	+	811	2	ISM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	9575	68	9575	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTGTGCATTATAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	69510038	69514506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69510175_69513831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014426	chr2	+	743	1	ISM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	13368	0	13368	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCCCATTCTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	69513831	69514574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69513800_69514600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014427	chr2	+	132	2	ISM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	9106	21577	9106	-21577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGCTGCCTTTGCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	69562542	69562779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69562619_69562723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014428	chr2	+	143	2	ISM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	12961	12459	12961	-12459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGATTCTCAGTCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	69566397	69571897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69566473_69571829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014429	chr2	+	219	2	ISM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	18490	10292	18490	-10292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCCTAAAGCCGATGACA	NA	NA	NA	NA	NA	NA	NA	NA	69571926	69574064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69572038_69573956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014430	chr2	+	139	2	ISM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	20637	7897	20637	-7897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGATTCTTTATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	69574073	69576459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69574125_69576371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014431	chr2	+	1010	2	FSM	ENSMUSG00000027088.11	ENSMUST00000180290.2	3267	2	1380	877	1380	-877	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAAGGCCACTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	69622695	69626689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_69622836_69625819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014432	chr2	+	909	1	ISM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	6679	0	5343	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	69626658	69627567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69626700_69627600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014433	chr2	+	521	4	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	1	5124	1	-3910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGTCCATGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	69691906	69697006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014434	chr2	+	432	4	ISM	ENSMUSG00000068882.14	ENST00000414531.2	980	8	-2	3192	-2	-3192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATAATTTGATGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	69693615	69697724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014435	chr2	+	415	4	ISM	ENSMUSG00000068882.14	ENST00000414531.2	980	8	2996	3013	2996	-3013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGGTTTCTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	69696613	69697903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69696638_69696831_69697007_69697615_69697724_69697795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014436	chr2	+	441	4	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	7225	1206	5513	8	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCTCATTTTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	69699130	69700924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69699195_69699485_69699526_69700223_69700365_69700728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014437	chr2	+	93	2	ISM	ENSMUSG00000068882.14	ENST00000414531.2	980	8	5522	704	5522	-704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTATAGAGAGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69699139	69700212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69699199_69700178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014438	chr2	+	471	3	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	8341	952	6629	262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTTACTAATTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	69700246	69701178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69700365_69700728_69700925_69701021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014439	chr2	+	648	3	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	8841	351	7129	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTCTTAATTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	69700746	69701779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69700925_69701021_69701178_69701465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014440	chr2	+	122	1	ISM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	8890	1213	7178	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATGGTAATTCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	69700795	69700917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69700800_69700900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014441	chr2	+	337	2	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	7403	-482	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGATGTCCACCTGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	69701020	69701648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_69701175_69701465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014442	chr2	-	271	4	ISM	ENSMUSG00000051730.16	ENST00000410097.5	670	7	6167	-1	6167	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAGACAAAAAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	69709534	69701616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69701648_69702026_69702126_69704227_69704280_69709445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014443	chr2	+	367	1	ISM	ENSMUSG00000068882.14	ENSMUST00000166411.8	2088	12	9876	42	8164	18	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATATTTAAGATATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	69701781	69702148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_69701800_69702100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014444	chr2	-	418	4	ISM	ENSMUSG00000051730.16	ENST00000410097.5	670	7	4407	409	4407	-409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGTCATTTCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	69711294	69702026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69702126_69704227_69704280_69709445_69709529_69711110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014445	chr2	-	233	2	ISM	ENSMUSG00000051730.16	ENST00000308099.7	499	5	4410	456	4410	-456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTCCAATTGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	69711291	69702073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69702126_69711110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014446	chr2	-	203	3	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	4540	-465	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTGTAAGTTTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	69711161	69702082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_69702126_69709419_69709529_69711110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014447	chr2	-	264	2	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	4408	-7828	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCTCATAATATTATCA	NA	NA	NA	NA	NA	NA	NA	NA	69711293	69709445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_69709523_69711106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014448	chr2	-	270	2	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	4408	-7828	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCTCATAATATTATCA	NA	NA	NA	NA	NA	NA	NA	NA	69711293	69709445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_69709529_69711106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014449	chr2	-	257	2	NNC	ENSMUSG00000051730.16	novel	968	7	NA	NA	4408	-7831	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAGCTCATAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	69711293	69709448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_69709523_69711110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014450	chr2	-	353	3	ISM	ENSMUSG00000051730.16	ENST00000410097.5	670	7	3936	7865	3936	-7865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATATTCTTTACACA	NA	NA	NA	NA	NA	NA	NA	NA	69711765	69709482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69709529_69711110_69711293_69711640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014451	chr2	-	352	3	ISM	ENSMUSG00000051730.16	ENST00000308099.7	499	5	-2	9549	-2	-9549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTATTTGATACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	69715703	69711166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_69711293_69711640_69711756_69715592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014452	chr2	+	1433	2	ISM	ENSMUSG00000070880.11	ENSMUST00000094934.11	3355	17	37565	51	36708	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGGTGTGCAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	70429950	70432307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_70430043_70430966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014453	chr2	+	1393	1	NIC	ENSMUSG00000070880.11	novel	3355	17	NA	NA	37723	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTGTACCCATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	70430965	70432358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_70431000_70432400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014454	chr2	+	271	2	ISM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	77	18998	63	-16633	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAATTAGTTGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	70491996	70503071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_70492105_70502908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014455	chr2	+	261	3	ISM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	16397	9871	16397	-9871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTACAACACAGACACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	70508330	70509833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_70508447_70508871_70508959_70509775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014456	chr2	+	1757	7	ISM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	16963	0	16949	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCGTGTACTTCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70508882	70522087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014457	chr2	+	225	1	ISM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	29925	0	29911	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	70521844	70522069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_70521800_70522100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014458	chr2	-	358	3	ISM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	79683	29727	79683	-29727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGAAGCCAAGCAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	70576389	70572477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_70572587_70575846_70575984_70576277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014459	chr2	+	729	6	ISM	ENSMUSG00000041966.19	ENST00000611110.4	947	8	6498	-11	6498	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCCTCAGTCAGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	70912286	70920312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014460	chr2	+	5006	1	Genic_Genomic	ENSMUSG00000041966.19	novel	NA	NA	NA	NA	15409	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGTGTATACATATGTA	NA	NA	NA	NA	NA	NA	NA	NA	70921197	70926203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_70921200_70926200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014461	chr2	+	395	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	-122	43494	28	-43494	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCTGAGGCATTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	71042205	71049709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71042419_71044782_71044900_71049644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014462	chr2	+	421	4	ISM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	7467	16519	7309	-16075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCTTAACATACTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	71049644	71077128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71049763_71058943_71059035_71066258_71066375_71077032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014463	chr2	+	364	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	23943	15683	23935	-15683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTTAGTTCTTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	71066270	71077520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71066375_71077032_71077129_71077356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014464	chr2	+	328	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	34716	15491	34708	-15491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGATTGGTCATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	71077043	71077712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71077129_71077356_71077520_71077632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014465	chr2	+	300	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	35040	14991	35032	-14991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCCTGATGGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	71077367	71078212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71077520_71077632_71077733_71078164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014466	chr2	+	372	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	35304	13928	35296	-13928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAGTAACTAGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	71077631	71079275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71077733_71078164_71078291_71079130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014467	chr2	+	307	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	37412	11872	37404	-11872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGAAACGCAGCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	71079739	71081331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71079767_71080062_71080197_71081185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014468	chr2	+	367	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	37790	4633	37782	-4633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCTGAGAAATAACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	71080117	71088570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71080197_71081185_71081331_71088427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014469	chr2	+	310	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	38930	1942	38922	-1942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGATTGTCATCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	71081257	71091261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71081331_71088427_71088569_71091165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014470	chr2	+	556	3	ISM	ENSMUSG00000027012.16	ENSMUST00000100028.10	2097	17	46097	-74	46089	74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGGTGTCATTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	71088424	71093277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71088569_71091165_71091292_71092991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014471	chr2	+	320	1	ISM	ENSMUSG00000027012.16	ENSMUST00000112140.8	2573	18	51243	0	50992	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	71093327	71093647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_71093300_71093600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014472	chr2	-	1817	1	Genic_Genomic	ENSMUSG00000027010.17	novel	NA	NA	NA	NA	94871	1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGTGTACATCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71103222	71101405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_71101400_71103200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014473	chr2	-	1816	2	ISM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	91244	2549	91244	-2549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTGTGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	71106849	71103955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_71105698_71106775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014474	chr2	-	1072	1	Genic_Genomic	ENSMUSG00000023391.9	novel	NA	NA	NA	NA	2276	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTTTTTCCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	71374822	71373750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_71373800_71374800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014475	chr2	-	1151	2	ISM	ENSMUSG00000023391.9	ENSMUST00000024159.8	2473	3	1211	526	1211	-526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCCGTAGCTCCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	71375887	71374277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_71375269_71375727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014476	chr2	+	1588	5	ISM	ENSMUSG00000049044.17	ENST00000409036.5	3942	27	252896	-2	141782	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGTTAGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	72064509	72087818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_72064547_72064951_72065131_72069407_72069499_72083283_72083339_72086592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014477	chr2	+	1366	4	ISM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	149889	19	149889	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCATTAAATATACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	72072616	72087789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_72072666_72073071_72073137_72083283_72083339_72086592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014478	chr2	+	1227	1	NIC	ENSMUSG00000049044.17	novel	4181	31	NA	NA	163864	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTGTTAGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	72086591	72087818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_72086600_72087800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014479	chr2	+	446	3	ISM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	5636	3331	5636	-3331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCCTCACTGATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	72312138	72313906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_72312293_72312772_72312857_72313698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014480	chr2	+	397	1	ISM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	10338	0	10338	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72316840	72317237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_72316800_72317200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014481	chr2	-	436	1	Genic_Genomic	ENSMUSG00000027109.17	novel	NA	NA	NA	NA	43565	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGAAAAAGTCTAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	72767205	72766769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_72766800_72767200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014482	chr2	+	573	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCCTGTAAATAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	72809778	72819022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_72809940_72817871_72817977_72818715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014483	chr2	+	309	1	Genic_Genomic	ENSMUSG00000063714.16	novel	NA	NA	NA	NA	1129	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCCTGTAAATAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	72818713	72819022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_72818700_72819000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014484	chr2	-	358	1	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	121289	0	119802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCGTTTCTAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	72923502	72923144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_72923100_72923500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014485	chr2	-	450	2	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	117178	599	115691	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAAGACCCTACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	72927613	72923743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_72924069_72927488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014486	chr2	-	338	3	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	72450	6491	70963	-6090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTCATACTTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	72972341	72929635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_72929733_72930417_72930559_72972241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014487	chr2	-	454	4	ISM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	57576	7273	56089	-6872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTAGCATTCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	72987215	72930417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_72930559_72972241_72972340_72972651_72972733_72987081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014488	chr2	-	341	3	ISM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	14803	4827	13430	-4827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGAAACCTGTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	73029874	72972697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_72972733_72987081_72987258_73029744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014489	chr2	-	471	4	ISM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	1404	19258	31	-19258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTGGCCGTGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	73043273	72987128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_72987258_73029744_73029873_73033668_73033813_73043203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014490	chr2	-	632	1	ISM	ENSMUSG00000041777.13	ENSMUST00000058615.10	2821	10	28965	0	28965	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGCCTATTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	73114080	73113448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73113400_73114100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014491	chr2	-	646	2	ISM	ENSMUSG00000041777.13	ENSMUST00000058615.10	2821	10	26292	1357	26292	-1357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGCCGGCCACACCG	NA	NA	NA	NA	NA	NA	NA	NA	73116753	73114805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73115380_73116681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014492	chr2	+	915	1	ISM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	7228	0	7228	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTACTTTGGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	73150225	73151140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_73150200_73151100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014493	chr2	+	709	1	ISM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	24509	0	24456	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGATCTTTGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	73167453	73168162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_73167500_73168200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014494	chr2	-	528	1	Genic_Genomic	ENSMUSG00000027107.4	novel	NA	NA	NA	NA	16601	5	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTATTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	73394081	73393553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_73393600_73394100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014495	chr2	-	946	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	12021	2613	12021	-2613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTCCTTTAATAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	73398661	73396171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73396652_73397045_73397286_73398435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014496	chr2	-	704	3	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	9693	3486	9693	-3486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGTGTGGCTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	73400989	73397044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73397286_73398435_73398660_73400750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014497	chr2	-	453	2	NNC	ENSMUSG00000027107.4	novel	4386	9	NA	NA	12022	-3490	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTAAGCTGTGTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	73398660	73397048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_73397286_73398444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014498	chr2	-	772	4	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	6967	4875	6967	-4875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCCGAGACTCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	73403715	73398433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73398660_73400750_73400989_73401756_73401953_73403603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014499	chr2	-	584	5	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	8	8197	8	-8197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGGTGGCCTCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	73410674	73401755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73401953_73403603_73403714_73404664_73404710_73404829_73404976_73410588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014500	chr2	+	496	2	FSM	ENSMUSG00000086382.2	ENSMUST00000125413.2	680	2	106	78	106	-78	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGGAGCCTTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	73415299	73419453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_73415550_73419207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014501	chr2	+	285	1	ISM	ENSMUSG00000086382.2	ENSMUST00000125413.2	680	2	4053	0	4053	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTAACCATTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73419246	73419531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_73419200_73419500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014502	chr2	-	944	1	Genic_Genomic	ENSMUSG00000056486.19	novel	NA	NA	NA	NA	14068	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGAGCTGCCTACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	73441945	73441001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_73441000_73441900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014503	chr2	-	282	1	ISM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	162748	1657	13071	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGGGACGAATAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	73442942	73442660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73442700_73442900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014504	chr2	-	1117	7	NNC	ENSMUSG00000056486.19	novel	1411	11	NA	NA	-19438	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTCCTGTCATTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	73510188	73443241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_73443541_73444998_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014505	chr2	-	1709	1	ISM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	74319	0	45073	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73648561	73646852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73646900_73648600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014506	chr2	-	1914	3	ISM	ENSMUSG00000027104.19	ENSMUST00000100009.11	3936	11	34615	1021	34615	721	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCCAGTCATCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	73659019	73647888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73649493_73653544_73653651_73658815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014507	chr2	-	792	6	FSM	ENSMUSG00000027104.19	ENST00000409499.5	799	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTACTTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	73722931	73649162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_73649493_73653544_73653651_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014508	chr2	-	759	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	2	-47	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTTGAGGTAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	73741668	73738743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014509	chr2	-	311	1	Genic_Genomic	ENSMUSG00000018770.10	novel	NA	NA	NA	NA	2587	1	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTTGAGGTAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	73739054	73738743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_73738700_73739100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014510	chr2	-	338	3	NNC	ENSMUSG00000018770.10	novel	749	5	NA	NA	1416	-139	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTGAAATGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	73740225	73738929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_73739052_73739527_73739722_73740203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014511	chr2	-	394	4	ISM	ENSMUSG00000018770.10	ENST00000409194.5	749	5	1	830	1	-784	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTATTGGAACAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73741640	73739574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73739722_73740207_73740286_73741298_73741423_73741595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014512	chr2	-	356	4	ISM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	0	843	0	-843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGCTGCCAAATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	73741669	73739633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_73739722_73740207_73740286_73741298_73741405_73741585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014513	chr2	-	1256	1	ISM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	57359	43	56634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	74351933	74350677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_74350700_74351900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014514	chr2	-	1355	2	ISM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	49146	781	48421	-781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGTTTTTAACTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	74360146	74351458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_74352642_74359974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014515	chr2	-	1588	1	Genic_Genomic	ENSMUSG00000001815.16	novel	NA	NA	NA	NA	4845	4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTTATTTGTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74484918	74483330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_74483300_74484900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014516	chr2	-	3056	4	FSM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	286	0	152	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAATTTTATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	74489611	74483334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_74484912_74485756_74486680_74488110_74488392_74489336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014517	chr2	+	392	2	FSM	ENSMUSG00000027102.5	ENSMUST00000019749.4	2634	2	1058	1184	811	-63	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCAAAAAGGAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	74536306	74537093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_74536463_74536857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014518	chr2	+	298	1	ISM	ENSMUSG00000027102.5	ENSMUST00000019749.4	2634	2	2684	47	2437	1	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCTCCAGAGCATAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	74537932	74538230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_74537900_74538200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014519	chr2	+	1326	3	ISM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	43499	1008	43499	-1008	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAACTTCCTGTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	74699645	74707767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_74699774_74700751_74700829_74706646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014520	chr2	+	1179	3	NNC	ENSMUSG00000027099.10	novel	2950	10	NA	NA	43528	-1130	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAAAAGGAAATGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	74699674	74707645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_74699778_74700751_74700829_74706646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014521	chr2	+	1169	1	Genic_Genomic	ENSMUSG00000027099.10	novel	NA	NA	NA	NA	51461	1	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCGTAGAAAATAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	74707607	74708776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_74707600_74708800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014522	chr2	-	343	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	486	-79	486	79	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCAAATGGCACAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	75021680	75021337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_75021300_75021700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014523	chr2	+	2002	5	ISM	ENSMUSG00000059005.14	ENST00000677863.1	3870	10	3453	1115	2918	890	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAATATTTGGATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75493038	75497355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75493092_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014524	chr2	+	1569	3	NNC	ENSMUSG00000059005.14	novel	3816	10	NA	NA	5251	657	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGATAAAAGGTCATATAT	NA	NA	NA	NA	NA	NA	NA	NA	75495371	75497122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_75495492_75495577_75495646_75495741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014525	chr2	+	2923	1	ISM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	7218	0	6708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	75496828	75499751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75496800_75499800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014526	chr2	-	433	1	Genic_Genomic	ENSMUSG00000015839.7	novel	NA	NA	NA	NA	27572	1	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGACTTTTTGAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	75506288	75505855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_75505900_75506300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014527	chr2	-	632	3	ISM	ENSMUSG00000015839.7	ENST00000446151.6	2360	5	24935	1295	24935	-1295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTAAAGCTTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	75508925	75507158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_75507529_75507888_75508057_75508831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014528	chr2	-	494	3	ISM	ENSMUSG00000015839.7	ENST00000446151.6	2360	5	24085	2058	24085	-2058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGGAGCTATTTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	75509775	75507921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_75508057_75508831_75508922_75509506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014529	chr2	-	564	3	ISM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	28	3018	28	-3011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTTTGGCAGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	75534957	75508874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_75508922_75509506_75509774_75534707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014530	chr2	+	1715	5	FSM	ENSMUSG00000042410.17	ENST00000409888.1	721	5	1	-995	1	995	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGGATATTGAAATACG	NA	NA	NA	NA	NA	NA	NA	NA	75662613	75757550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_75662856_75681837_75681928_75740004_75740045_75741964_75742023_75756265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014531	chr2	+	704	4	NNC	ENSMUSG00000042410.17	novel	721	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGCTCCTGGGCCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	75662619	75756555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_75662856_75681837_75681928_75741934_75742023_75756265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014532	chr2	+	304	3	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	19305	40916	18989	-40916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGCTCACCCTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75681837	75684636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75681928_75683065_75683157_75684513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014533	chr2	+	196	2	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	21981	40603	21665	-40603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCGTTTTAACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75684513	75684949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75684635_75684874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014534	chr2	+	218	3	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	22341	36240	22025	-36240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACAAATGGTATATGATA	NA	NA	NA	NA	NA	NA	NA	NA	75684873	75689312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75684950_75687360_75687433_75689242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014535	chr2	+	233	3	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	24828	33194	24512	-33194	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTATCTCTTTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	75687360	75692358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75687433_75689242_75689323_75692277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014536	chr2	+	209	2	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	29744	28335	29428	-28335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTATTTCTAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	75692276	75697217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75692359_75697090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014537	chr2	+	209	2	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	34555	26824	34239	-26824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATCACTTCATTATGG	NA	NA	NA	NA	NA	NA	NA	NA	75697087	75698728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75697217_75698648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014538	chr2	+	236	2	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	36115	17612	35799	-17612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGTAAAAACAAAGTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	75698647	75707940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75698758_75707814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014539	chr2	+	184	2	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	45280	7039	44964	-7039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAAGTACAGCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	75707812	75718513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75707943_75718459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014540	chr2	+	220	3	ISM	ENSMUSG00000042410.17	ENSMUST00000111952.9	2589	14	55949	1051	55633	-1051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGCTTATAGTTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	75718481	75724501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75718512_75722135_75722213_75724388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014541	chr2	+	235	3	ISM	ENSMUSG00000042410.17	ENST00000681449.1	1825	20	61539	23100	61538	7759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGACAGGTAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	75724386	75733311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75724502_75730525_75730596_75733261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014542	chr2	+	221	3	ISM	ENSMUSG00000042410.17	ENST00000681449.1	1825	20	67680	21118	67679	9741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTCCACACTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	75730527	75735293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75730596_75733261_75733324_75735202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014543	chr2	+	531	5	ISM	ENSMUSG00000042410.17	ENST00000642466.2	2053	20	70643	0	70413	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCCGGAGCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75733261	75767574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75767353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014544	chr2	+	198	3	ISM	ENSMUSG00000042410.17	ENST00000681449.1	1825	20	77104	99	77103	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGGAATGCTAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	75739951	75756312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75740045_75741964_75742023_75756265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014545	chr2	+	148	1	NIC	ENSMUSG00000042410.17	novel	7359	20	NA	NA	93415	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACCTTTTAAAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	75756263	75756411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_75756300_75756400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014546	chr2	+	1337	1	ISM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	97760	77	97432	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTGTTCTAAAACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	75760280	75761617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_75760300_75761600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014547	chr2	-	497	1	Genic_Genomic	ENSMUSG00000002731.7	novel	NA	NA	NA	NA	17481	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTTTATTCTTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	76460736	76460239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_76460200_76460700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014548	chr2	-	1334	7	FSM	ENSMUSG00000002731.7	ENST00000677689.1	1352	7	18	0	18	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGCTTTATTCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	76478199	76460240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473517_76473649_76478135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014549	chr2	-	854	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTGCAAATCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	76503408	76493387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014550	chr2	-	661	4	FSM	ENSMUSG00000002732.15	ENST00000434643.6	654	4	0	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTCTATTTGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	76503359	76493528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_76493697_76496020_76496152_76502040_76502193_76503149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014551	chr2	-	295	2	NNC	ENSMUSG00000002732.15	novel	860	4	NA	NA	7203	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTACTTCTCTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	76496156	76493533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_76493693_76496020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014552	chr2	-	3389	1	ISM	ENSMUSG00000051747.16	ENSMUST00000099980.10	16891	45	65075	48	62802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCACCATGTATCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	76747724	76744335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_76744300_76747700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014553	chr2	-	1812	1	ISM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	83617	0	83617	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGAATTTACTCATTACT	NA	NA	NA	NA	NA	NA	NA	NA	77012495	77010683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_77010700_77012500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014554	chr2	+	450	3	FSM	ENSMUSG00000027011.15	ENST00000602475.5	437	3	0	-13	0	13	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTCGGATTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	78699583	78702830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_78699750_78700803_78701023_78702765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014555	chr2	+	378	2	ISM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	193	50625	0	-1805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTAAAAGGTAATGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	78699583	78701012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_78699750_78700800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014556	chr2	+	262	2	NNC	ENSMUSG00000027011.15	novel	437	3	NA	NA	25	-1884	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAGAAAACCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	78699608	78700933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_78699750_78700812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014557	chr2	+	178	2	NNC	ENSMUSG00000027011.15	novel	437	3	NA	NA	879	11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTCGGATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	78700900	78702828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_78701023_78702772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014558	chr2	+	1593	4	ISM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	3373	77	2742	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTTAAGAGAATTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	78702763	78751560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_78702817_78744017_78744151_78749030_78749179_78750301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014559	chr2	+	933	3	ISM	ENSMUSG00000027011.15	ENST00000602710.5	1536	6	44104	0	43986	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAAAGTCTTGTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	78744007	78750943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_78744151_78749030_78749179_78750301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014560	chr2	+	1307	1	Genic_Genomic	ENSMUSG00000027011.15	novel	NA	NA	NA	NA	50311	2	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGTCCTAAGTATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	78750332	78751639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_78750300_78751600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014561	chr2	+	1022	6	FSM	ENSMUSG00000034683.13	ENST00000409137.7	1022	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGAGCTCCAGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	79538281	79646652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_79538599_79540242_79540304_79586797_79586833_79589954_79590016_79638645_79638745_79646203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014562	chr2	+	1013	6	NNC	ENSMUSG00000034683.13	novel	1022	6	NA	NA	3	-1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTGAGCTCCAGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	79538284	79646651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_79538599_79540247_79540304_79586797_79586833_79589954_79590016_79638645_79638745_79646203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014563	chr2	+	450	1	NIC	ENSMUSG00000034683.13	novel	1022	6	NA	NA	107913	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGAGCTCCAGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	79646202	79646652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_79646200_79646700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014564	chr2	+	1616	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCTTCAAGTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	80447404	80462005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014565	chr2	+	474	3	FSM	ENSMUSG00000027001.11	ENST00000342619.10	474	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTGACAAAGTGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	80447718	80461330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_80447951_80451537_80451585_80461135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014566	chr2	+	159	2	ISM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	88	16148	88	-16148	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGTAGGAGTAATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	80469247	80473098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_80469277_80472968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014567	chr2	+	252	2	ISM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	3843	14636	3843	-14636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAGAAGACAGGTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	80473002	80474610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_80473140_80474495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014568	chr2	+	180	2	ISM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	5334	12444	5334	-12444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGAGTCCTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	80474493	80476802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_80474624_80476752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014569	chr2	+	141	2	ISM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	7588	5968	7588	-5968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGAGATTCTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	80476747	80483278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_80476808_80483197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014570	chr2	+	328	3	ISM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	14051	2825	14051	-2825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTGGGTGATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80483210	80486421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_80483340_80485136_80485207_80486292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014571	chr2	+	248	2	ISM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	17141	1587	17141	-1587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCACAGCATACAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	80486300	80487659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_80486422_80487532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014572	chr2	+	140	1	ISM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	18376	1571	18376	-1571	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCCACTAGTGACTACC	NA	NA	NA	NA	NA	NA	NA	NA	80487535	80487675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_80487500_80487700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014573	chr2	+	825	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	808	-331	808	331	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTCTAAATTAGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	80668292	80669117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_80668300_80669100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014574	chr2	+	643	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	1063	6808	1063	-6808	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATTTCTGACATAATAG	NA	NA	NA	NA	NA	NA	NA	NA	82822623	82823386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_82822932_82823051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014575	chr2	+	674	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	2471	1553	2471	-1553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCACATCTGGCGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	82824031	82828641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_82824372_82828307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014576	chr2	+	440	2	ISM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	6891	0	6891	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGTATATAAAATTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	82828451	82830194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_82828803_82830105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014577	chr2	-	962	1	FSM	ENSMUSG00000081400.2	ENSMUST00000119790.2	793	1	-23	-146	-23	146	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATTCAATCACAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	83184316	83183354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_83183400_83184300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014578	chr2	-	900	2	ISM	ENSMUSG00000027082.16	ENSMUST00000111711.8	3968	8	32633	2379	29669	-1796	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTCACCTATACGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84274459	84272862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_84273657_84274353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014579	chr2	-	1467	1	ISM	ENSMUSG00000034101.15	ENSMUST00000111696.8	6281	19	48496	712	47231	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	84432593	84431126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_84431100_84432600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014580	chr2	-	1532	3	ISM	ENSMUSG00000034101.15	ENST00000673683.1	5296	19	45110	706	44269	-706	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCATCTCTGAAAGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	84435555	84431847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_84433248_84433992_84434097_84435527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014581	chr2	+	1278	2	ISM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	55	1156	55	-1156	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAACTGTGTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	84491761	84497582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84491945_84496487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014582	chr2	+	1686	2	ISM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	5306	-3	5306	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGTACCCAACTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	84497012	84498741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84498050_84498092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014583	chr2	-	747	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTTTAAATTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84501114	84499558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014584	chr2	-	539	4	FSM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	115	0	61	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGCAAGTTTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	84500937	84499564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_84499742_84500355_84500461_84500588_84500735_84500826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014585	chr2	-	387	1	NIC	ENSMUSG00000076437.12	novel	747	4	NA	NA	573	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTTGTAGTTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84500425	84500038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_84500000_84500400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014586	chr2	-	990	1	ISM	ENSMUSG00000050043.17	ENSMUST00000111664.8	1926	7	5813	0	5751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84502649	84501659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_84501700_84502600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014587	chr2	-	1339	2	ISM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	4911	-1	4911	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84503489	84501659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_84502877_84503367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014588	chr2	+	1639	4	ISM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	6949	0	6906	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGGAGTCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	84515694	84518559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84515792_84515946_84516044_84516534_84516630_84517209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014589	chr2	+	953	3	ISM	ENSMUSG00000027080.7	ENST00000337672.9	1442	5	7174	-1	7174	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGGACTTCAATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84515962	84517533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84516297_84516485_84516666_84517094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014590	chr2	+	766	2	Antisense	novelGene_ENSMUSG00000027079.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACACTTGGTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	84552942	84553967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_84553099_84553357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014591	chr2	-	1913	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTATGATTCTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84557694	84553464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_84554562_84555872_84556501_84557506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014592	chr2	-	1136	2	FSM	ENSMUSG00000027079.16	ENST00000302731.4	1132	2	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATAGCAATCTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	84556464	84553825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_84554562_84556064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014593	chr2	-	735	1	ISM	ENSMUSG00000027079.16	ENSMUST00000165219.8	2564	4	3025	1379	1902	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTATAGCAATCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	84554561	84553826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_84553800_84554600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014594	chr2	+	1050	2	ISM	ENSMUSG00000034059.15	ENSMUST00000238573.2	1585	5	3381	0	3381	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTGTCCTGGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84567782	84568999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84567873_84568039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014595	chr2	+	1562	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGTCGGACTTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	84629172	84640523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014596	chr2	+	1531	4	NNC	ENSMUSG00000027078.15	novel	1560	4	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAAGTCGGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84629191	84640520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_84629268_84633122_84633219_84636680_84636868_84639348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014597	chr2	+	676	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	84657354	84660557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_84657492_84657942_84658058_84660133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014598	chr2	+	428	1	NIC	ENSMUSG00000027076.11	novel	690	3	NA	NA	2402	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	84660129	84660557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_84660100_84660600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014599	chr2	+	477	1	ISM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	23697	5	22480	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	84693448	84693925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84693400_84693900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014600	chr2	+	661	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	342	6650	342	-6650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTTCTTCACGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	84868136	84870800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014601	chr2	+	601	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	1015	6317	1015	-6317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAAACCCCTCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	84868809	84871133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84868883_84870217_84870324_84870608_84870800_84870902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014602	chr2	+	529	3	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	2812	6083	2812	-6083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTCTCACTGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	84870606	84871367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84870800_84870902_84871134_84871262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014603	chr2	+	686	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	3106	5452	3106	-5452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGGACTCTGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	84870900	84871998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84871134_84871262_84871367_84871451_84871581_84871778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014604	chr2	+	483	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	6868	761	6868	-761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGTGACAGCTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84874662	84876689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84874793_84875753_84875925_84876027_84876117_84876596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014605	chr2	+	831	4	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	8021	15	8021	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATGACTTTGGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	84875815	84877435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84875925_84876027_84876117_84876596_84876784_84876989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014606	chr2	+	469	1	Genic_Genomic	ENSMUSG00000027067.17	novel	NA	NA	NA	NA	9190	3	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84876984	84877453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_84877000_84877500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014607	chr2	+	1594	2	ISM	ENSMUSG00000033955.14	ENSMUST00000048400.4	4799	8	4524	2801	4524	-2801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTACGGGGGCGGCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	84893026	84900591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_84894361_84900331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014608	chr2	+	1540	5	ISM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	12203	203	12203	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGGTTAGGGATGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	90689819	90696781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014609	chr2	+	1553	1	Genic_Genomic	ENSMUSG00000027282.18	novel	NA	NA	NA	NA	17992	7	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTTAGTGGTAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	90695608	90697161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_90695600_90697200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014610	chr2	-	887	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	159	0	159	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	90735012	90724979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014611	chr2	-	460	3	FSM	ENSMUSG00000005510.10	ENST00000534208.5	456	3	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCAACTCGGCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	90734837	90732734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_90732956_90733120_90733289_90734766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014612	chr2	-	222	1	NIC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	1879	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCAACTCGGCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	90732956	90732734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_90732700_90733000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014613	chr2	+	754	2	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	30	4279	30	-4279	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGCTCACGAAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	90735116	90736626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90735254_90736009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014614	chr2	+	1989	3	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	922	282	922	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACAGTGGACTAAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	90736008	90740623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90736628_90737888_90737996_90739360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014615	chr2	+	1472	1	Genic_Genomic	ENSMUSG00000005505.13	novel	NA	NA	NA	NA	4348	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCTGTGTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	90739434	90740906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_90739400_90740900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014616	chr2	-	598	1	ISM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	6735	0	6735	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGACTCCCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	90741654	90741056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90741100_90741700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014617	chr2	-	1261	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	6	49	6	-49	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTAGCAGGTCCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90748383	90741105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014618	chr2	+	1448	6	FSM	ENSMUSG00000002104.12	ENSMUST00000111445.10	1450	6	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTGATTCTGACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	90865967	90876075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90875184_90875385_90875790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014619	chr2	+	211	2	ISM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	105	4774	105	-4774	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCTCCTGGCTCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	90884549	90885003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90884677_90884919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014620	chr2	+	238	3	ISM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	487	3724	487	-3724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGTGATACCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	90884931	90886053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90885004_90885802_90885908_90885992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014621	chr2	+	195	2	ISM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	1544	3400	1544	-3400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAGGAGGTAAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	90885988	90886377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90886056_90886249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014622	chr2	+	228	2	ISM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	1812	2678	1812	-2678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGGAAGACTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	90886256	90887099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90886388_90887002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014623	chr2	+	198	2	ISM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	2861	1570	2861	-1570	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACAGGGCTCACCGTC	NA	NA	NA	NA	NA	NA	NA	NA	90887305	90888207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90887406_90888109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014624	chr2	+	240	2	ISM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	3668	1277	3668	-1277	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCTGCAACAGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	90888112	90888500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90888207_90888354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014625	chr2	+	225	2	ISM	ENSMUSG00000002102.16	ENSMUST00000111441.10	1419	11	3914	304	3914	-304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCAGCGTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	90888358	90889473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90888501_90889390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014626	chr2	+	178	1	ISM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	5246	0	5155	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	90889599	90889777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_90889600_90889800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014627	chr2	-	723	1	ISM	ENSMUSG00000002105.16	ENSMUST00000079976.10	1884	8	7716	0	6221	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	90892858	90892135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90892100_90892900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014628	chr2	-	347	2	ISM	ENSMUSG00000002105.16	ENST00000533076.5	1347	10	5755	-8	5755	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTAGACCGGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	90893324	90892149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90892303_90893130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014629	chr2	-	914	3	ISM	ENSMUSG00000002105.16	ENSMUST00000079976.10	1884	8	6799	485	5304	-463	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCCCTGGCCACACG	NA	NA	NA	NA	NA	NA	NA	NA	90893775	90892620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90893324_90893408_90893509_90893664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014630	chr2	-	225	2	ISM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	5552	1060	5552	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGAGACTCCAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	90893527	90893217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90893324_90893408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014631	chr2	-	318	3	ISM	ENSMUSG00000002105.16	ENST00000533076.5	1347	10	5280	1079	5280	-18	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCACTCTGCACAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	90893799	90893236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90893324_90893408_90893509_90893668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014632	chr2	-	251	2	ISM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	5282	1250	5282	-189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAACCTACTGGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	90893797	90893407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90893526_90893664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014633	chr2	-	260	3	ISM	ENSMUSG00000002105.16	ENST00000533076.5	1347	10	5026	1273	5026	-212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGAAGAAGACGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	90894053	90893430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90893509_90893668_90893798_90894000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014634	chr2	-	366	4	ISM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	3725	1519	3725	-458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGGAGTAGGTACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	90895354	90893676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90893798_90894000_90894052_90895059_90895150_90895250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014635	chr2	-	312	3	ISM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	3033	2902	3033	938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGATGGGACCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	90896046	90895059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90895150_90895250_90895353_90895926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014636	chr2	-	350	3	ISM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	2602	3084	2602	756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCGGGCCCCCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	90896477	90895241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90895353_90895926_90896046_90896357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014637	chr2	-	697	4	ISM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	109	3790	-25	72	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCCCAAGCCCCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	90900653	90895925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_90896046_90896357_90896472_90898775_90899085_90900499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014638	chr2	-	781	2	FSM	ENSMUSG00000002105.16	ENST00000531974.5	778	2	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGGCTTCCTGACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	90899079	90895994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_90896472_90898775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014639	chr2	-	479	1	NIC	ENSMUSG00000002105.16	novel	1884	8	NA	NA	2604	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGCTGGCTTCCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	90896475	90895996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_90896000_90896500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014640	chr2	+	178	2	ISM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	44	10412	44	-7355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAACCAAGGTGGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	91033300	91034030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91033394_91033945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014641	chr2	+	1057	6	ISM	ENSMUSG00000002103.17	ENST00000529444.7	1270	8	2198	-13	2198	13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCATGAAAACCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91036142	91041398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91036254_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014642	chr2	-	718	5	ISM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	17925	-4	17925	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGGTATTACTTCGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	91049236	91042810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014643	chr2	+	150	1	ISM	ENSMUSG00000002103.17	ENSMUST00000002172.14	4656	11	11040	0	10349	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAAAGACTTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	91044293	91044443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91044300_91044400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014644	chr2	-	658	5	ISM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	1864	4243	1864	-4243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTCCCACCCTCACCGC	NA	NA	NA	NA	NA	NA	NA	NA	91065297	91047057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91065159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014645	chr2	-	665	5	ISM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	15	4591	15	-4591	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCAGGTGTGACATCCC	NA	NA	NA	NA	NA	NA	NA	NA	91067146	91047405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91047576_91047651_91047752_91049088_91049235_91065159_91065297_91067034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014646	chr2	+	303	2	ISM	ENSMUSG00000027257.14	ENST00000539589.5	1777	11	2	4542	2	-4542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATGTAGAGGATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	91087676	91090270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91087922_91090212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014647	chr2	+	634	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	9	2801	9	-2801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTCCCCTGGCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	91090521	91092011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91090607_91090748_91090906_91091515_91091752_91091855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014648	chr2	+	691	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	1002	1287	1002	-1287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTTAGAGGCTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	91091514	91093525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91091752_91091855_91092012_91093112_91093289_91093403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014649	chr2	+	509	4	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	1421	1047	1421	-1047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGAGAGCCGGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	91091933	91093765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91092012_91093112_91093289_91093403_91093525_91093631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014650	chr2	+	365	3	ISM	ENSMUSG00000027257.14	ENSMUST00000111349.9	1993	11	5956	385	3117	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCGCCTGAGTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	91093629	91094639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91093769_91094109_91094232_91094535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014651	chr2	+	536	3	ISM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	3117	-1	3117	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAGGTTGGAATGATGG	NA	NA	NA	NA	NA	NA	NA	NA	91093629	91094813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91093769_91094112_91094232_91094535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014652	chr2	+	491	1	NIC	ENSMUSG00000027257.14	novel	1867	10	NA	NA	4020	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	91094532	91095023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_91094500_91095000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014653	chr2	+	655	4	ISM	ENSMUSG00000027255.15	ENST00000426335.6	2887	15	20	9655	20	-9655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCTGGTTCCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	91095419	91097602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014654	chr2	+	480	4	ISM	ENSMUSG00000027255.15	ENSMUST00000028691.7	2791	17	8460	1532	8460	-1513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGCTGCTGGACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	91104097	91105744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91104233_91105139_91105267_91105417_91105512_91105620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014655	chr2	+	691	4	ISM	ENSMUSG00000027255.15	ENSMUST00000028691.7	2791	17	9609	709	9609	-690	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCAGCCCTCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	91105246	91106567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91105267_91105417_91105512_91105620_91105740_91106109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014656	chr2	-	689	1	ISM	ENSMUSG00000040591.19	ENSMUST00000064652.14	2896	9	168866	0	168866	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAACGACAAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	91106101	91105412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91105400_91106100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014657	chr2	+	1009	1	ISM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	10949	0	10630	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	91106267	91107276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91106300_91107300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014658	chr2	-	1371	4	ISM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	162109	0	162089	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGACTGCCTGCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	91112878	91108174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014659	chr2	-	715	1	ISM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	165685	413	165665	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGAGTCTAAAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	91109302	91108587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91108600_91109300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014660	chr2	+	402	3	ISM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	89	18216	89	-17181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATGACACCAGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	91480293	91484455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91480598_91482108_91482169_91484417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014661	chr2	+	323	3	ISM	ENSMUSG00000027247.17	ENSMUST00000111330.3	3068	13	863	9915	863	-8904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACCTGTGGGGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	91484415	91492732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91484553_91484780_91484877_91492642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014662	chr2	+	504	3	ISM	ENSMUSG00000027247.17	ENSMUST00000111330.3	3068	13	16937	1321	16937	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTAGGAAGGGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	91500489	91501326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_91500620_91500810_91500915_91501056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014663	chr2	+	1452	1	Genic_Genomic	ENSMUSG00000027247.17	novel	NA	NA	NA	NA	17670	3	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCTGTTTAGGAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	91501222	91502674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_91501200_91502700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014664	chr2	-	1148	3	ISM	ENSMUSG00000027244.15	ENST00000524625.5	2610	16	31108	0	31089	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGGCCTCCCGTGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	91509775	91505907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91506809_91509071_91509201_91509657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014665	chr2	-	283	1	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	34055	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCGTCGAGCTGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91506809	91506526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_91506500_91506800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014666	chr2	-	380	4	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	30155	2544	30122	-2544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAACCCCTTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	91510742	91509070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91509201_91509657_91509775_91510264_91510343_91510687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014667	chr2	-	370	4	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	25834	3748	25801	-3748	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTATGGTGAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	91515063	91510274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91510343_91510687_91510803_91511903_91512041_91515013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014668	chr2	-	330	3	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	25300	5377	25267	-5377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCCATGAGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	91515597	91511903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91512041_91515013_91515105_91515495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014669	chr2	-	373	2	ISM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	14	17743	0	-17743	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTAATTAATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	91540883	91524269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_91524351_91540591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014670	chr2	+	2287	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	40	-19	40	19	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGGACTGCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	91541306	91551909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_91541597_91542424_91543211_91550698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014671	chr2	-	323	1	Genic_Genomic	ENSMUSG00000027239.15	novel	NA	NA	NA	NA	1569	7	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCCAGTTTGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	91760464	91760141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_91760100_91760500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014672	chr2	-	624	4	FSM	ENSMUSG00000027239.15	ENST00000395569.8	638	4	20	-6	20	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCCCAGTTTGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	91762105	91760142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_91760461_91761162_91761325_91761716_91761794_91762038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014673	chr2	-	886	1	ISM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	29512	0	29444	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	92234876	92233990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_92234000_92234900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014674	chr2	-	2644	6	ISM	ENSMUSG00000068742.12	ENST00000616623.4	3836	13	20608	-2	20608	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	92243712	92233990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014675	chr2	+	323	2	ISM	ENSMUSG00000027221.6	ENSMUST00000065797.7	2680	3	12016	1886	12016	-1886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACGTCCTGATCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	92442067	92443709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_92442169_92443487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014676	chr2	+	253	1	Genic_Genomic	ENSMUSG00000027221.6	novel	NA	NA	NA	NA	15292	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGATTTGGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	92445343	92445596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_92445300_92445600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014677	chr2	+	1511	4	ISM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	28017	1689	28017	-1689	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTCTTCTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	92773459	92784714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_92773532_92776258_92776561_92781646_92781777_92783707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014678	chr2	+	1043	1	Genic_Genomic	ENSMUSG00000027220.3	novel	NA	NA	NA	NA	39920	2	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTCTAACTAACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	92785362	92786405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_92785400_92786400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014679	chr2	+	1046	6	FSM	ENSMUSG00000068735.15	ENST00000616990.4	1054	6	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTAGGAGGTTGTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	93017815	93030581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_93017967_93027953_93028094_93028607_93028683_93029209_93029337_93029701_93029804_93030130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014680	chr2	+	455	1	NIC	ENSMUSG00000068735.15	novel	1123	6	NA	NA	2165	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGAGGTTGTGTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	93030129	93030584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_93030100_93030600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014681	chr2	-	1233	4	ISM	ENSMUSG00000027215.14	ENSMUST00000111257.8	1003	10	30745	-727	30745	8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGCGGTATCCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	93252279	93249447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014682	chr2	-	835	1	Genic_Genomic	ENSMUSG00000027215.14	novel	NA	NA	NA	NA	32735	1	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTGAAGAGGCGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	93250289	93249454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_93249500_93250300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014683	chr2	+	924	2	Antisense	novelGene_ENSMUSG00000027215.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAGACTCATGTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	93249454	93250671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_93250290_93250582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014684	chr2	-	873	1	Genic_Genomic	ENSMUSG00000040272.15	novel	NA	NA	NA	NA	15341	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGTCATTGCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	93664683	93663810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_93663800_93664700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014685	chr2	-	583	5	ISM	ENSMUSG00000040174.15	ENST00000302708.9	699	6	417	-1	417	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTCTCTGCCATAA	NA	NA	NA	NA	NA	NA	NA	NA	93838490	93826527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93838358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014686	chr2	-	455	5	ISM	ENSMUSG00000040174.15	ENST00000302708.9	699	6	35	5241	35	-5241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTACAATGATGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	93838872	93831769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_93831859_93833397_93833502_93835077_93835126_93838358_93838488_93838787
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014687	chr2	-	306	1	Genic_Genomic	ENSMUSG00000027194.17	novel	NA	NA	NA	NA	38357	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAATATAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94158585	94158279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_94158300_94158600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014688	chr2	-	245	1	ISM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	26210	0	26197	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATATTAGCATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	94242271	94242026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94242000_94242300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014689	chr2	-	434	1	ISM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	24474	1547	24461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCGCATTCCTGCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	94244007	94243573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94243600_94244000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014690	chr2	-	533	2	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	19730	158	19730	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGTCTAGCCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	94248738	94243731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94244127_94248600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014691	chr2	-	262	3	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	17079	5038	17079	-5038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAATTATGGTGAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	94251389	94248611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94248738_94249215_94249293_94251330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014692	chr2	-	274	2	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	15647	8204	15647	-8204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATGCTGACTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	94252821	94251777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94251872_94252641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014693	chr2	-	588	4	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	12324	9066	12324	-9066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGACAGAAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94256144	94252639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94252824_94253756_94253847_94255318_94255424_94255935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014694	chr2	-	462	3	ISM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	11044	11742	11044	-11742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACCATTCCTGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	94257424	94255315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94255424_94255935_94256143_94257277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014695	chr2	-	250	2	ISM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	8302	16364	8289	-14817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGGTTCTTTTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	94260179	94258390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94258485_94260023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014696	chr2	-	354	2	ISM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	18	18000	5	-16453	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAAGTTTATGATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	94268463	94260026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_94260186_94268268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014697	chr2	-	447	2	NNC	ENSMUSG00000075014.2	novel	660	5	NA	NA	18	4	intron_retention	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGGTACACACACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98497628	98496887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_98497017_98497310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014698	chr2	-	624	2	NNC	ENSMUSG00000075014.2	novel	660	5	NA	NA	75	4	intron_retention	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGGTACACACACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98497571	98496887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_98497017_98497076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014699	chr2	-	250	1	ISM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	67960	0	60016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATACACTTCTCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	101391375	101391125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_101391100_101391400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014700	chr2	-	367	2	ISM	ENSMUSG00000027165.17	ENSMUST00000090513.11	969	7	44894	5	44894	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTCCCTCTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	101406497	101392473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_101392700_101406356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014701	chr2	-	265	3	ISM	ENSMUSG00000027165.17	ENSMUST00000090513.11	969	7	35743	13890	35743	-13788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTACTTTCCGGGGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	101415648	101406358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_101406497_101413865_101413933_101415588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014702	chr2	-	268	3	ISM	ENSMUSG00000027165.17	ENSMUST00000090513.11	969	7	34594	21409	34594	-21307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAACAAGGGTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	101416797	101413877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_101413933_101415588_101415661_101416656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014703	chr2	-	312	2	ISM	ENSMUSG00000027165.17	ENSMUST00000090513.11	969	7	10369	24188	10369	-24086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCTCTTACATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	101441022	101416656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_101416815_101440868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014704	chr2	+	1741	1	NIC	ENSMUSG00000032864.5	novel	3424	3	NA	NA	4566	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2315	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGTGATTTATTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	101459656	101461397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_101459700_101461400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014705	chr2	+	1737	2	NNC	ENSMUSG00000032864.5	novel	1737	2	NA	NA	4586	697	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTAGGGGCAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	101459676	101463571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_101461395_101463552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014706	chr2	+	1050	5	ISM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	8956	0	-1829	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	101725553	101731991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014707	chr2	+	385	4	FSM	ENSMUSG00000027163.14	ENST00000263401.10	435	4	1	49	1	-49	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCGGGACCAGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	101727385	101731375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_101727529_101729212_101729248_101730213_101730318_101731272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014708	chr2	+	245	2	NNC	ENSMUSG00000027163.14	novel	437	4	NA	NA	31	-1107	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTCAGTGTCGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	101727415	101730317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_101727529_101730185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014709	chr2	+	726	1	NIC	ENSMUSG00000027163.14	novel	1191	6	NA	NA	3881	0	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	101731265	101731991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_101731300_101732000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014710	chr2	-	667	1	ISM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	235516	0	235516	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	101781214	101780547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_101780500_101781200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014711	chr2	-	752	2	ISM	ENSMUSG00000048058.18	ENST00000528989.5	1146	5	231238	0	231203	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGAATGACCTGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	101785527	101783122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_101783521_101785173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014712	chr2	-	400	1	NIC	ENSMUSG00000048058.18	novel	3833	6	NA	NA	233208	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGAATGACCTGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	101783522	101783122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_101783100_101783500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014713	chr2	-	748	4	ISM	ENSMUSG00000048058.18	ENST00000528989.5	1146	5	1	2050	1	-2050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGACTGTGGAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102016764	101785172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_101785520_101888251_101888387_101900277_101900404_102016624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014714	chr2	+	293	1	FSM	ENSMUSG00000082328.2	ENSMUST00000119411.2	463	1	308	-138	308	138	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCAGTAAAAGACATCAG	NA	NA	NA	NA	NA	NA	NA	NA	102004942	102005235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_102004900_102005200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014715	chr2	+	239	2	ISM	ENSMUSG00000005089.16	ENST00000644868.1	1864	11	37	43713	34	-40188	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCCAGTTTAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	102566322	102568254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_102566429_102568121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014716	chr2	+	701	4	ISM	ENSMUSG00000005089.16	ENST00000644868.1	1864	11	1835	33024	1832	-29499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGTCCATTCATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	102568120	102578943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_102568275_102570033_102570285_102574152_102574319_102578813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014717	chr2	+	492	3	ISM	ENSMUSG00000005089.16	ENST00000644868.1	1864	11	7858	25526	7855	-22001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATATTCCAAGCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	102574143	102586441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_102574319_102578813_102578941_102586251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014718	chr2	+	513	3	ISM	ENSMUSG00000005089.16	ENST00000644868.1	1864	11	12566	20418	12563	-16893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTGAGTGACGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	102578851	102591549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_102578941_102586251_102586486_102591359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014719	chr2	+	1476	5	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	19965	718	19962	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAAGGCCACAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	102586250	102612489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014720	chr2	+	1532	3	ISM	ENSMUSG00000005089.16	ENST00000642171.1	3382	13	121637	-2	44771	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTAGCGGGGAACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	102611059	102613345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_102611133_102611807_102612523_102612601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014721	chr2	+	642	1	ISM	ENSMUSG00000005089.16	ENSMUST00000080210.10	11595	11	123700	7784	46415	2	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTAGCGGGGAACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	102612703	102613345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_102612700_102613300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014722	chr2	-	2685	1	ISM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	87800	0	87521	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTTGCCATTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	102644170	102641485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102641500_102644200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014723	chr2	-	2815	4	ISM	ENSMUSG00000005087.18	ENST00000526669.6	780	6	39671	-2301	39648	-566	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTCACAGCAAAGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	102692043	102642051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102644683_102652552_102652632_102654605_102654653_102691985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014724	chr2	-	294	2	ISM	ENSMUSG00000005087.18	ENSMUST00000099673.9	2848	9	48274	15992	48110	-14405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTAAAATGTTTAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	102683581	102658883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102658956_102683359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014725	chr2	-	295	2	ISM	ENSMUSG00000005087.18	ENST00000352818.8	1028	8	45376	38880	45376	-38880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAGAATGGCATCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	102686315	102683358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102683582_102686243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014726	chr2	-	357	3	ISM	ENSMUSG00000005087.18	ENST00000352818.8	1028	8	35899	41781	35899	-41781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCGGTTACCATAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	102695792	102686259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102686313_102691904_102692042_102695625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014727	chr2	-	463	3	ISM	ENSMUSG00000005087.18	ENSMUST00000111191.9	1533	12	-117	47499	9	-47485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATCCTCGTCACGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102731831	102691963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102692042_102695625_102695792_102731612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014728	chr2	-	349	1	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	52090	0	52039	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGATATGACATGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102851768	102851419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102851400_102851800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014729	chr2	-	338	3	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	45144	1016	45093	-1016	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGTTGATGATGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	102858714	102852435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102852615_102854509_102854575_102858620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014730	chr2	-	323	2	ISM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	38124	12088	38073	6456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTAAAGTCGAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	102865734	102863507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102863656_102865559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014731	chr2	-	300	2	ISM	ENSMUSG00000010914.11	ENSMUST00000111183.2	2078	5	31068	1424	31068	-1424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTGCGCTGTCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	102872739	102871387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102871487_102872538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014732	chr2	-	305	2	ISM	ENSMUSG00000010914.11	ENSMUST00000111183.2	2078	5	26639	2573	26639	-2573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCGTTTATGTGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	102877168	102872536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_102872739_102877065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014733	chr2	-	2068	1	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	32641	0	32096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCAGTGTTTAGAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	103595353	103593285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_103593300_103595400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014734	chr2	-	2089	2	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	28634	-178	28634	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCCTAGATGGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	103598815	103595184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_103597209_103598750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014735	chr2	-	682	1	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	31950	2077	31405	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	103596044	103595362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_103595400_103596000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014736	chr2	+	1371	1	Genic_Genomic	ENSMUSG00000027180.13	novel	NA	NA	NA	NA	34011	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGTTGCCCCACCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	103892215	103893586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_103892200_103893600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014737	chr2	+	1687	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTATCTTGACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	103926149	103945699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014738	chr2	-	2700	1	FSM	ENSMUSG00000084516.3	ENSMUST00000122567.3	80	1	-240	-2380	-240	2380	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGCTGGCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	104259525	104256825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_104256800_104259500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014739	chr2	-	3069	3	ISM	ENSMUSG00000027177.15	ENST00000456517.2	7309	16	62192	1144	62192	-1144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTTAGTAATTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	104261736	104257975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104260677_104261071_104261200_104261496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014740	chr2	-	1252	3	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	21929	11469	21822	-11395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGGTAATTCACTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104302106	104271594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104271710_104276856_104276981_104301093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014741	chr2	-	1377	2	ISM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	118	41042	11	-40968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATAGACTTTGGATCGGC	NA	NA	NA	NA	NA	NA	NA	NA	104323917	104301167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104302193_104323565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014742	chr2	+	729	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	42	-1	21	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACCTGTTCAGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	104389549	104398402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_104389830_104390068_104390321_104398205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014743	chr2	-	540	3	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	19714	0	19714	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACTCAGAATGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	104553509	104552128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104552464_104553220_104553300_104553383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014744	chr2	-	337	1	NIC	ENSMUSG00000027173.8	novel	1801	9	NA	NA	20758	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACTCAGAATGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	104552465	104552128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_104552100_104552500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014745	chr2	-	444	3	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	14666	2874	14666	-2874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACGCTATTGGCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	104558557	104555002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104555127_104557466_104557657_104558427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014746	chr2	-	417	3	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	12463	5471	12463	-5471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTTCTTGACTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	104560760	104557599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104557657_104558427_104558556_104560528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014747	chr2	-	488	2	ISM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	44	8456	44	-8456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCTAATCAGGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	104573179	104560584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104560920_104573026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014748	chr2	+	651	1	FSM	ENSMUSG00000083856.2	ENSMUST00000117876.2	1183	1	532	0	532	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGGGGGTGGTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	104651055	104651706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_104651100_104651700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014749	chr2	-	2258	3	ISM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	7784	-17	7784	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGAGTGTGACGCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	104672437	104661068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104663156_104669666_104669800_104672399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014750	chr2	-	651	6	ISM	ENSMUSG00000027170.13	ENSMUST00000111110.3	817	8	10210	-33	10210	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	104837178	104830000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014751	chr2	-	510	5	ISM	ENSMUSG00000027170.13	ENSMUST00000111110.3	817	8	4098	1577	4098	-1577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTAGAAAGAACATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	104843290	104831610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014752	chr2	-	564	5	ISM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	2176	7113	2139	-7080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGCCCACAGGTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	104845249	104837113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014753	chr2	-	610	5	ISM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	1	13210	1	-13177	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTGTAAGAAAAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	104847424	104843210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014754	chr2	+	984	5	ISM	ENSMUSG00000016458.16	ENST00000639563.3	1503	9	0	8986	0	-8986	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCATCCTCTGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	104957141	104993703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014755	chr2	+	1716	4	ISM	ENSMUSG00000016458.16	ENSMUST00000111099.2	2441	10	35932	6	35932	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATGCAGGAGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104997159	105003955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_104997314_104999378_104999469_105000270_105000355_105002567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014756	chr2	-	1302	1	Genic_Genomic	ENSMUSG00000005973.7	novel	NA	NA	NA	NA	11728	1	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGCTGGAGTTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	105217936	105216634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_105216600_105217900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014757	chr2	-	1452	2	ISM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	10134	493	10134	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTGGACTTCACGCCC	NA	NA	NA	NA	NA	NA	NA	NA	105219530	105217128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_105218372_105219321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014758	chr2	-	1835	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	159	726	159	-726	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACCAAACTAGCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	105229505	105217361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014759	chr2	-	327	2	FSM	ENSMUSG00000086029.8	ENST00000643931.1	324	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTAGGCCCCTGGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	105500818	105410936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_105411026_105500580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014760	chr2	-	236	1	FSM	ENSMUSG00000102424.3	ENSMUST00000194826.3	3482	1	1948	1298	1948	-1298	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAATTGGTGGTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	105489740	105489504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_105489500_105489700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014761	chr2	-	368	2	ISM	ENSMUSG00000086029.8	ENST00000643436.1	840	3	4053	310	61	-310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCAAACCTAATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	105500755	105489818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_105490012_105500580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014762	chr2	-	335	2	ISM	ENSMUSG00000086029.8	ENST00000643436.1	840	3	2	11072	2	-11072	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTGCTCAGACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	105504806	105500580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_105500751_105504641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014763	chr2	+	576	4	ISM	ENSMUSG00000027168.22	ENST00000638963.1	1559	9	3591	5108	17	-1393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGACTTCAGCTGAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	105514189	105521989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_105514304_105515231_105515448_105516122_105516289_105521909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014764	chr2	+	512	4	ISM	ENSMUSG00000027168.22	ENST00000638755.1	1066	8	7734	2605	7734	-185	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAGGACGGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	105521906	105523197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_105522069_105522538_105522622_105522814_105522966_105523081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014765	chr2	+	468	4	ISM	ENSMUSG00000027168.22	ENST00000638755.1	1066	8	8401	-1	8401	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTCTGCAGCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	105522573	105525803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_105522622_105522814_105522966_105523081_105523198_105525650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014766	chr2	+	1290	3	ISM	ENSMUSG00000027168.22	ENSMUST00000111082.8	3116	12	16678	-1	8979	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTGTTACAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	105523151	105527707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_105523198_105525650_105525802_105526614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014767	chr2	+	306	1	ISM	ENSMUSG00000027168.22	ENSMUST00000111086.11	2601	13	27857	302	12929	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACAAGAATACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	105527101	105527407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_105527100_105527400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014768	chr2	+	537	3	FSM	ENSMUSG00000042670.6	ENST00000526776.5	395	3	0	-142	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTATCTCATATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	105761068	105795905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_105761198_105794524_105794636_105795608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014769	chr2	+	229	2	NNC	ENSMUSG00000042670.6	novel	395	3	NA	NA	5	-1128	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCTTTAATGCCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	105761073	105794635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_105761192_105794524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014770	chr2	+	505	3	ISM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	32351	31	6265	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATATAAAAATATATTGG	NA	NA	NA	NA	NA	NA	NA	NA	105767333	105795872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_105767464_105794524_105794636_105795608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014771	chr2	+	317	1	Genic_Genomic	ENSMUSG00000042670.6	novel	NA	NA	NA	NA	34519	1	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTATCTCATATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	105795587	105795904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_105795600_105795900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014772	chr2	-	1116	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	79	2	79	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAAGAGTATTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	105833815	105797055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014773	chr2	-	487	1	Genic_Genomic	ENSMUSG00000027122.16	novel	NA	NA	NA	NA	7379	1	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACTTACTGTTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	106793357	106792870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_106792900_106793400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014774	chr2	-	818	3	ISM	ENSMUSG00000027122.16	ENSMUST00000093883.4	1363	5	3164	-23	3164	23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATTTGTAGCTACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	106797572	106794750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_106795216_106795766_106795992_106797444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014775	chr2	+	476	2	Antisense	novelGene_ENSMUSG00000027122.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTGTAAAATAAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	106794959	106795988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_106795218_106795770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014776	chr2	-	839	3	ISM	ENSMUSG00000027122.16	ENSMUST00000093883.4	1363	5	833	994	833	-994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTGATAGCATCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	106799903	106795767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_106795992_106797444_106797573_106799416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014777	chr2	-	630	2	ISM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	0	6555	0	-4653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACTCAGATGTATGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	106804769	106799426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_106799904_106804616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014778	chr2	+	1979	1	FSM	ENSMUSG00000063684.10	ENSMUST00000121752.2	1428	1	-36	-515	-36	515	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGAATAACCCCATTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108779114	108781093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_108779100_108781100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014779	chr2	-	1166	2	ISM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	146641	0	146641	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTATTTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	108961994	108922641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_108923643_108961829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014780	chr2	-	765	3	ISM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	143210	0	140761	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATCTTATTATTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	108967874	108923201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_108923643_108961829_108961965_108967685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014781	chr2	-	817	4	ISM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	-128	45069	-128	-44509	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATGAGGATGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	109108763	108967710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_108967878_109021896_109022034_109104733_109105021_109108537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014782	chr2	+	3874	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111050.10	3965	2	91	0	91	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTTTAATGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	109522871	109557352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_109523120_109553726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014783	chr2	+	442	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111045.9	3973	2	130	3401	111	-3401	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAAGAGCTGCTGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	109524037	109553951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_109524255_109553726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014784	chr2	+	428	2	FSM	ENSMUSG00000048482.15	ENST00000439476.6	3905	2	187	3290	187	-3247	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCGCAAACATGTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	109553442	109554105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_109553492_109553726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014785	chr2	+	417	1	Genic_Genomic	ENSMUSG00000048482.15	novel	NA	NA	NA	NA	3724	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	109556979	109557396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_109557000_109557400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014786	chr2	-	608	1	FSM	ENSMUSG00000083915.2	ENSMUST00000120873.2	610	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTCTAGCACAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	109622877	109622269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_109622300_109622900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014787	chr2	+	1338	3	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	4257	2700	4257	-2700	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGAAGAGCCATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	109725454	109728648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_109725525_109726580_109726791_109727590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014788	chr2	+	1096	2	NNC	ENSMUSG00000027162.8	novel	4228	5	NA	NA	5450	-2802	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTTAAATATATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	109726647	109728546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_109726788_109727590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014789	chr2	+	1084	1	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	9067	0	9067	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTAATGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	109730264	109731348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_109730300_109731300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014790	chr2	+	480	3	FSM	ENSMUSG00000050199.14	ENST00000480977.2	488	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTTAACCTTTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	109748461	109827117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_109748651_109801036_109801109_109826898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014791	chr2	+	219	1	NIC	ENSMUSG00000050199.14	novel	5060	18	NA	NA	78445	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTTAACCTTTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	109826898	109827117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_109826900_109827100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014792	chr2	+	517	3	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	126	12873	126	-12873	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAACCAAATGCACGCAT	NA	NA	NA	NA	NA	NA	NA	NA	109848287	109862788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_109848560_109852226_109852360_109862676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014793	chr2	+	414	3	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	14513	3911	14513	-3911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTTACGTCTGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	109862674	109871750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_109862785_109870918_109871078_109871605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014794	chr2	+	590	3	ISM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	22755	843	22755	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTAAATCAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	109870916	109874818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_109871078_109871605_109871748_109874531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014795	chr2	+	306	1	Genic_Genomic	ENSMUSG00000027160.17	novel	NA	NA	NA	NA	27200	6	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCATTTTTTTTAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	109875361	109875667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_109875400_109875700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014796	chr2	-	1937	1	FSM	ENSMUSG00000074971.5	ENSMUST00000099626.5	2267	1	330	0	330	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTCAATTCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	110193198	110191261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_110191300_110193200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014797	chr2	+	213	2	FSM	ENSMUSG00000050808.14	ENST00000527569.1	607	2	246	148	246	-146	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGGAGAAAGCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	110562129	110567783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_110562251_110567691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014798	chr2	+	139	1	ISM	ENSMUSG00000050808.14	ENSMUST00000111016.9	3421	4	16108	1941	5909	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGATCACTGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	110567792	110567931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_110567800_110567900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014799	chr2	-	499	1	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	10616	229	10616	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCTGCTCCACCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	112079020	112078521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_112078500_112079000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014800	chr2	-	639	3	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	8192	1765	8192	-1536	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGGCAAGAAGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	112081444	112080057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_112080525_112080903_112081021_112081389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014801	chr2	-	558	2	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	3187	5570	3187	-5341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGATGGCAGAGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	112086449	112083862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_112083976_112086004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014802	chr2	-	611	2	ISM	ENSMUSG00000041358.2	ENSMUST00000043970.2	3731	7	-53	7989	-53	-7760	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGCCAGGAGGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	112089689	112086281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_112086714_112089510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014803	chr2	+	1115	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	-5	-1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTGGTAGGAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	112092265	112093615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_112092423_112092657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014804	chr2	+	145	2	FSM	ENSMUSG00000027133.4	ENST00000557912.1	140	2	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATCTTTTACGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	112092365	112092803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_112092423_112092715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014805	chr2	+	88	1	ISM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	443	813	345	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTAATCTTTTACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	112092713	112092801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_112092700_112092800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014806	chr2	-	279	1	ISM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	4738	0	4229	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAAGTTCCCCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	112193634	112193355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_112193400_112193600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014807	chr2	-	815	4	FSM	ENSMUSG00000027131.4	ENST00000249209.8	690	4	-125	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTCACAAGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	112198372	112193362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_112193700_112194496_112194651_112197746_112197862_112198163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014808	chr2	-	578	3	ISM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	3719	84	3210	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCTATGTAAACAAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	112194653	112193439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_112193700_112194136_112194298_112194496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014809	chr2	-	173	2	FSM	ENSMUSG00000027131.4	ENST00000559421.1	166	2	-6	-1	-6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATATGGACCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	112197869	112193649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_112193700_112197746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014810	chr2	-	385	1	NIC	ENSMUSG00000027131.4	novel	983	5	NA	NA	3346	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTAAAGTTAAATTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	112194517	112194132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_112194100_112194500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014811	chr2	-	527	2	FSM	ENSMUSG00000027131.4	ENST00000557879.1	529	2	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTAAAGTTAAATTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	112197860	112194132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_112194518_112197718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014812	chr2	-	366	3	ISM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	510	846	1	-68	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTCCATGGGACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	112197862	112194201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_112194298_112194496_112194651_112197746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014813	chr2	-	300	1	FSM	ENSMUSG00000081541.2	ENSMUST00000121023.2	301	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCAACTAATGAAAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	112219841	112219541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_112219500_112219800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014814	chr2	+	1247	2	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	30967	670	30967	-670	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTATCAGTGTACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	112240522	112243915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_112240582_112242727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014815	chr2	+	1230	1	ISM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	33800	0	33800	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	112243355	112244585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_112243400_112244600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014816	chr2	+	4127	3	ISM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	7873	1206	7873	-1206	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGAGTCTGAATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	112293214	112301301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_112293285_112295081_112295163_112297325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014817	chr2	+	3966	1	Genic_Genomic	ENSMUSG00000055943.6	novel	NA	NA	NA	NA	13202	2	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTTCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	112298543	112302509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_112298500_112302500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014818	chr2	+	938	5	ISM	ENSMUSG00000003604.15	ENST00000306730.8	1334	6	28	1070	28	-842	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGGTATGGCCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	112323303	112460414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014819	chr2	+	871	4	ISM	ENSMUSG00000003604.15	ENSMUST00000099588.4	791	5	65519	-232	65519	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTACATTTTGAACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	112455497	112461488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_112455571_112458093_112458190_112460084_112460422_112461123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014820	chr2	-	2981	1	ISM	ENSMUSG00000074934.4	ENSMUST00000099575.4	4148	2	9502	0	9502	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCGTGACTGAACTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	113579489	113576508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_113576500_113579500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014821	chr2	-	3072	2	FSM	ENSMUSG00000074934.4	ENSMUST00000099575.4	4148	2	5	1071	5	-1071	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTAAAAGCACATCACTG	NA	NA	NA	NA	NA	NA	NA	NA	113588986	113577579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_113580501_113588835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014822	chr2	-	844	1	ISM	ENSMUSG00000041219.15	ENSMUST00000110948.8	4878	11	14884	1442	11548	1	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGGTCAGGTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	113664122	113663278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_113663300_113664100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014823	chr2	-	1077	3	ISM	ENSMUSG00000041219.15	ENST00000543522.5	2877	11	8352	702	8352	-376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGGGCTCTACAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	113667318	113663981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_113664808_113665122_113665262_113667206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014824	chr2	-	521	2	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	4572	0	4572	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTCTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	113878796	113877762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_113878091_113878603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014825	chr2	-	330	1	NIC	ENSMUSG00000068614.8	novel	1473	7	NA	NA	5276	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTCTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	113878092	113877762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_113877800_113878100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014826	chr2	-	834	4	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	3207	34	3207	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACCAGACCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	113880161	113877796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_113878091_113878603_113878786_113879649_113879842_113879995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014827	chr2	-	808	4	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	2271	897	2271	-897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGATCGTATGCAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	113881097	113878659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_113878786_113879649_113879842_113879995_113880158_113880769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014828	chr2	-	518	3	NNC	ENSMUSG00000068614.8	novel	1473	7	NA	NA	2341	-1983	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAAGAGCTATGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	113881027	113879745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_113879842_113879995_113880158_113880767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014829	chr2	-	650	3	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	822	2233	822	-2233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	113882546	113879995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_113880158_113880769_113881095_113882383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014830	chr2	-	600	3	ISM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	10	3006	10	-3006	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTGGGCTAGGGGACG	NA	NA	NA	NA	NA	NA	NA	NA	113883358	113880768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_113881095_113882383_113882542_113883242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014831	chr2	-	1840	1	Genic_Genomic	ENSMUSG00000057147.14	novel	NA	NA	NA	NA	136633	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGAATGTCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	114348735	114346895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_114346900_114348700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014832	chr2	-	2034	4	ISM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	119375	87	119298	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATGTGTTTCGATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	114366070	114346987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014833	chr2	+	353	1	ISM	ENSMUSG00000040282.14	ENSMUST00000166472.8	2770	11	196700	0	196683	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACCCTTCTACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	115608896	115609249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_115608900_115609200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014834	chr2	+	506	3	ISM	ENSMUSG00000086308.2	ENSMUST00000152412.2	796	5	15604	74	14861	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAATGAAGCACTAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	115913309	115916318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_115913728_115915895_115915941_115916275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014835	chr2	-	271	1	FSM	ENSMUSG00000081787.2	ENSMUST00000120190.2	648	1	378	-1	378	1	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGCTCGAAGCAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	116358593	116358322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_116358300_116358600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014836	chr2	-	387	2	Genic_Genomic	ENSMUSG00000081787.2	novel	648	1	NA	NA	11	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCCCAGAATCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	116358960	116358420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_116358657_116358809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014837	chr2	+	1105	2	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	18039	0	18039	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGTCATGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	117098258	117102021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_117098429_117101086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014838	chr2	+	937	1	NIC	ENSMUSG00000027349.6	novel	1861	8	NA	NA	20865	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGTCATGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	117101084	117102021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_117101100_117102000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014839	chr2	+	2614	5	ISM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	11115	119	11115	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTATTTTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	117953471	117957495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014840	chr2	+	2114	1	NIC	ENSMUSG00000040152.9	novel	5848	22	NA	NA	13144	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGTCTGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	117955500	117957614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_117955500_117957600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014841	chr2	-	453	1	ISM	ENSMUSG00000040133.3	ENSMUST00000039160.3	3899	3	95857	0	95857	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCTCGAATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	118108043	118107590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_118107600_118108000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014842	chr2	-	354	1	Genic_Genomic	ENSMUSG00000009549.15	novel	NA	NA	NA	NA	3434	2	mono-exon	FALSE	NA	NA	NA	NA	NA	436	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTTTGTTTTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	118306682	118306328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_118306300_118306700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014843	chr2	-	548	4	ISM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	257	133	181	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCTAGCTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	118309935	118306463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014844	chr2	+	409	2	Antisense	novelGene_ENSMUSG00000009549.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTGTTTAAGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	118306519	118309514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_118306811_118309396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014845	chr2	-	325	3	NNC	ENSMUSG00000009549.15	novel	798	5	NA	NA	602	-276	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTTAAGAGAGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	118309514	118306606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_118306789_118307307_118307341_118309404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014846	chr2	-	341	4	ISM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	1	975	1	-975	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCATTCCCTGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	118310191	118307305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_118307341_118309401_118309515_118309858_118309932_118310071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014847	chr2	+	726	2	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	7	7762	7	-7762	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGAGAAGGCAGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	118519282	118520736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118519487_118520214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014848	chr2	+	1157	2	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	941	4289	941	-4289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCTGGCGGGATGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	118520216	118524209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118520872_118523707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014849	chr2	+	746	3	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	4435	3607	4435	-3607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCAGGGTAGGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	118523710	118524891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118524206_118524347_118524482_118524774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014850	chr2	+	1083	3	ISM	ENSMUSG00000074923.11	ENST00000455577.6	4277	10	31042	734	5546	-734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118524821	118527764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118524902_118524995_118525122_118526887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014851	chr2	+	706	3	ISM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	6410	0	6410	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTGGGTTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	118525685	118528498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118525823_118526887_118527069_118528110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014852	chr2	+	976	1	Genic_Genomic	ENSMUSG00000074923.11	novel	NA	NA	NA	NA	8251	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTTCATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	118527526	118528502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_118527500_118528500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014853	chr2	-	3057	1	ISM	ENSMUSG00000045838.9	ENSMUST00000059997.9	4703	11	5447	0	5447	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGGTCTTTATCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	118587695	118584638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_118584600_118587700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014854	chr2	+	1223	2	ISM	ENSMUSG00000027331.16	ENSMUST00000110842.8	925	8	17319	-988	17319	988	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTGTTAGTAGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	118662032	118665627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118662109_118664480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014855	chr2	+	1173	1	Genic_Genomic	ENSMUSG00000027331.16	novel	NA	NA	NA	NA	22301	10	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACCCTCAACTACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	118667014	118668187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_118667000_118668200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014856	chr2	+	2718	4	ISM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	14933	0	14933	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAAAAGTGGATGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	118707367	118713390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118707451_118708141_118708247_118708355_118708429_118710933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014857	chr2	+	631	2	ISM	ENSMUSG00000040007.9	ENST00000561234.5	4534	7	68	8187	68	-8187	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGCGGGGACCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	118730746	118746818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118730928_118746368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014858	chr2	+	778	2	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	15360	5115	15360	-5111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGCGTGCCCAGCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	118747293	118749894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118747791_118749613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014859	chr2	+	546	2	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	17678	4171	17678	-4167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTTCCTCAGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	118749611	118750838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118749997_118750677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014860	chr2	+	499	1	ISM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	22577	0	22577	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATTTTCTGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	118754510	118755009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118754500_118755000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014861	chr2	+	1148	1	FSM	ENSMUSG00000074916.6	ENSMUST00000099546.6	2090	1	943	-1	925	1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAACTCTGTAATTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	118757919	118759067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_118757900_118759100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014862	chr2	-	533	3	FSM	ENSMUSG00000039983.14	ENST00000558113.5	532	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGGGCCAGGCAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	118857867	118830162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_118830290_118852549_118852707_118857618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014863	chr2	-	1788	3	ISM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	2023	-12	16	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCTGATTTTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	118857851	118848247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_118849646_118852549_118852707_118857618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014864	chr2	-	1396	1	Genic_Genomic	ENSMUSG00000039983.14	novel	NA	NA	NA	NA	8219	7	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGATTTTCTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	118849648	118848252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_118848300_118849600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014865	chr2	-	744	2	ISM	ENSMUSG00000039983.14	ENSMUST00000110834.8	828	3	2005	-1	-2	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTTGTTAAGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	118857869	118852213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_118852707_118857618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014866	chr2	+	1185	3	FSM	ENSMUSG00000027324.2	ENST00000559271.1	1190	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGACAGGGACTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	118865648	118869290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_118865767_118867398_118867696_118868520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014867	chr2	+	431	3	ISM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	0	11438	0	-11438	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTAGGGTTCGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	118946794	118954360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118946882_118949088_118949337_118954264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014868	chr2	+	549	4	ISM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	2284	3710	2284	-3710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATCCAGGTATGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	118949078	118962088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118949337_118954264_118954357_118957543_118957639_118961984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014869	chr2	+	342	3	ISM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	10745	1115	10745	-1115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAACTGTAGGAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	118957539	118964683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118957639_118961984_118962099_118964554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014870	chr2	+	369	3	ISM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	15188	808	15188	-808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGATGGCAAAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	118961982	118964990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118962099_118964554_118964685_118964867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014871	chr2	+	1205	2	ISM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	18071	-812	18071	812	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCTGAAAATGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	118964865	118966610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118964990_118965529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014872	chr2	+	272	1	NIC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	18732	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGGTAGCAGAAACACAT	NA	NA	NA	NA	NA	NA	NA	NA	118965526	118965798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_118965500_118965800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014873	chr2	+	1100	1	ISM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	23384	0	19877	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAAGTCCTATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	118966671	118967771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_118966700_118967800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014874	chr2	+	646	3	FSM	ENSMUSG00000046814.4	ENSMUST00000057454.4	645	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTGTGCAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	118998252	119002871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_118998355_119000156_119000252_119002422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014875	chr2	+	609	3	NNC	ENSMUSG00000046814.4	novel	645	3	NA	NA	32	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGCAGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	118998285	119002872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_118998350_119000156_119000252_119002422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014876	chr2	+	549	2	NNC	ENSMUSG00000046814.4	novel	645	3	NA	NA	1902	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTGTGCAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	119000155	119002871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119000256_119002422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014877	chr2	+	454	1	Genic_Genomic	ENSMUSG00000046814.4	novel	NA	NA	NA	NA	4165	1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGTGCAGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	119002418	119002872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_119002400_119002900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014878	chr2	+	723	1	FSM	ENSMUSG00000055926.4	ENSMUST00000239130.2	3067	1	2345	-1	2345	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGTCTTGGATGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	119007334	119008057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_119007300_119008100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014879	chr2	+	526	2	NNC	ENSMUSG00000068580.12	novel	1505	10	NA	NA	150	-6446	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGATGGGCTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	119039264	119041084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119039669_119040962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014880	chr2	+	413	3	ISM	ENSMUSG00000068580.12	ENSMUST00000102519.5	1505	10	2371	2058	2371	-2058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGCCAAAAGATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	119041878	119045472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119042025_119042386_119042496_119045314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014881	chr2	+	520	2	ISM	ENSMUSG00000068580.12	ENSMUST00000102519.5	1505	10	7182	0	7182	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGATGTTTTTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	119046689	119047530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119046789_119047109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014882	chr2	+	409	2	ISM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	7796	124	7403	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGCCTCAAACAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	119046910	119047406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119047023_119047109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014883	chr2	+	400	1	Genic_Genomic	ENSMUSG00000068580.12	novel	NA	NA	NA	NA	7624	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATGTTTTTTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	119047131	119047531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_119047100_119047500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014884	chr2	+	266	2	ISM	ENSMUSG00000027315.14	ENSMUST00000110816.8	1913	11	629	3913	553	-3913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACGCTGGGCTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	119068586	119075763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119068725_119075635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014885	chr2	+	179	1	ISM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	11974	0	11783	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	119079816	119079995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119079800_119080000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014886	chr2	-	275	1	ISM	ENSMUSG00000034226.8	ENSMUST00000037360.8	1703	3	1797	0	1797	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTGGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119099956	119099681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119099700_119100000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014887	chr2	+	577	4	FSM	ENSMUSG00000034216.13	ENST00000558474.1	573	4	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGGAGCTGCAGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	119119516	119127622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119127374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014888	chr2	+	3525	3	ISM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	3955	-1	3659	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCCTCTTCCTAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	119123177	119128935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119123271_119123399_119125271_119127374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014889	chr2	+	973	4	FSM	ENSMUSG00000027313.4	ENST00000444189.7	975	4	4	-2	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTGAGTGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	119181465	119184089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_119182118_119182837_119182874_119183669_119183712_119183846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014890	chr2	+	941	2	NNC	ENSMUSG00000027313.4	novel	975	4	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTGAGTGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	119181467	119184089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119182166_119183846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014891	chr2	+	935	3	NNC	ENSMUSG00000027313.4	novel	975	4	NA	NA	20	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTGAGTGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	119181481	119184089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119182132_119183669_119183712_119183846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014892	chr2	+	956	3	NNC	ENSMUSG00000027313.4	novel	975	4	NA	NA	22	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCTGAGTGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	119181483	119184089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119182118_119183632_119183712_119183846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014893	chr2	+	931	3	NNC	ENSMUSG00000027313.4	novel	975	4	NA	NA	31	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGAAGTGTCTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	119181492	119184084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119182144_119183669_119183712_119183846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014894	chr2	+	1412	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	3	222	3	-222	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCCTCTTTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	119181712	119184640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_119182118_119182837_119182874_119183669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014895	chr2	+	1063	2	NNC	ENSMUSG00000027313.4	novel	1637	3	NA	NA	113	336	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACCCTCCAAGATCGT	NA	NA	NA	NA	NA	NA	NA	NA	119181822	119184423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119182132_119183669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014896	chr2	+	973	2	NNC	ENSMUSG00000027313.4	novel	1637	3	NA	NA	120	241	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGTGCGGTGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	119181829	119184328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119182144_119183669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014897	chr2	+	1019	1	ISM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	2134	0	2134	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGTAGGGAAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	119183843	119184862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119183800_119184900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014898	chr2	-	364	3	ISM	ENSMUSG00000034154.16	ENST00000616814.4	4280	34	64943	18487	64943	9858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATGAGGTCTCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	119243076	119223331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119223407_119232810_119232906_119242882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014899	chr2	-	481	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	53896	9692	53821	-9692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTTCTGCTCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	119254198	119242881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119243109_119248801_119248943_119254085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014900	chr2	-	379	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	52291	15610	52216	-15610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCCACAGGAGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	119255803	119248799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119248943_119254085_119254258_119255739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014901	chr2	-	395	4	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	46596	23903	46521	-23903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCAACCACTCACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	119261498	119257092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119257204_119257380_119257549_119258957_119259044_119261468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014902	chr2	-	456	3	ISM	ENSMUSG00000034154.16	ENSMUST00000110808.2	3928	28	23394	47338	23319	-47338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAAAGTGTGGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	119284700	119280527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119280699_119281810_119281932_119284536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014903	chr2	+	524	5	ISM	ENSMUSG00000014077.14	ENSMUST00000119172.2	3027	6	20	6256	20	-6256	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGGAAAGTTTCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	119378221	119411240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014904	chr2	+	660	3	ISM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	33018	1426	32994	-1414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTTTCAGCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	119411195	119416082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119411238_119415010_119415134_119415587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014905	chr2	+	511	1	Genic_Genomic	ENSMUSG00000014077.14	novel	NA	NA	NA	NA	38797	1	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTTTTACCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	119416998	119417509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_119417000_119417500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014906	chr2	+	1339	2	ISM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	1954	6831	1954	-6831	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTTTCAACATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	119426737	119431152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119426993_119430068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014907	chr2	+	1128	1	ISM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	12072	0	12072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTTGCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	119436855	119437983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119436900_119438000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014908	chr2	-	708	4	ISM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	2811	-1	2811	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGCTTATGTAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	119446139	119440450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014909	chr2	+	1385	2	ISM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	28790	-6	28371	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTTCAGTACTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	119477568	119480647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119477680_119479373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014910	chr2	+	1275	1	NIC	ENSMUSG00000027306.16	novel	3526	10	NA	NA	30174	5	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAGTTCAGTACTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	119479371	119480646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_119479400_119480600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014911	chr2	+	1005	1	Genic_Genomic	ENSMUSG00000027306.16	novel	NA	NA	NA	NA	31537	14	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTGAAACTAAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	119480734	119481739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_119480700_119481700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014912	chr2	-	345	1	ISM	ENSMUSG00000027305.10	ENSMUST00000110801.8	1478	5	7030	0	4871	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119486271	119485926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119485900_119486300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014913	chr2	-	900	3	FSM	ENSMUSG00000027305.10	ENST00000676533.1	899	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGACGTCAGTAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	119491142	119486119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_119486174_119488754_119488941_119490482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014914	chr2	-	244	2	NNC	ENSMUSG00000027305.10	novel	899	3	NA	NA	2201	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGACGTCAGTAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	119488941	119486119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_119486177_119488754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014915	chr2	+	292	2	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	26111	29764	26111	-29764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTGTCTGTACACTTA	NA	NA	NA	NA	NA	NA	NA	NA	119531659	119536124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119531747_119535919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014916	chr2	+	280	2	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	30414	24325	30414	-24325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCTCCCCAGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	119535962	119541563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119536125_119541445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014917	chr2	+	241	1	ISM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	60099	0	60099	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGTCCAAAGCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	119565647	119565888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119565600_119565900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014918	chr2	-	268	2	ISM	ENSMUSG00000034032.16	ENST00000304330.9	4237	25	19847	483	19844	-483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGTGCCCCATCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	119598141	119595297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119595397_119597972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014919	chr2	-	216	2	ISM	ENSMUSG00000034032.16	ENST00000304330.9	4237	25	17486	5318	17483	-5318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCTCTGCCTGGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	119600502	119600132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119600214_119600367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014920	chr2	-	205	2	ISM	ENSMUSG00000034032.16	ENST00000304330.9	4237	25	12095	10630	12092	-10630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCCGAGGTAAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	119605893	119605444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119605533_119605776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014921	chr2	-	218	2	ISM	ENSMUSG00000034032.16	ENST00000304330.9	4237	25	9278	12455	9275	-12455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGAAGAGCCTGTCACG	NA	NA	NA	NA	NA	NA	NA	NA	119608710	119607269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119607375_119608597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014922	chr2	+	3658	2	ISM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	66709	-2	66701	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTGGGAGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119794409	119798230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119795895_119796057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014923	chr2	+	212	3	FSM	ENSMUSG00000033902.13	ENST00000627631.1	210	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGTACTTGGTCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	119803534	119841516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_119803650_119841223_119841287_119841482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014924	chr2	+	212	3	NNC	ENSMUSG00000033902.13	novel	210	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAAGTACTTGGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	119803535	119841515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_119803650_119841223_119841289_119841482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014925	chr2	+	596	4	ISM	ENSMUSG00000098488.8	ENST00000452633.5	2238	15	1827	2523	1827	-2523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCACGACAAGGTAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	119867225	119869553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119867339_119868218_119868355_119868976_119869114_119869343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014926	chr2	+	492	3	ISM	ENSMUSG00000033852.17	ENST00000342159.6	2749	20	10132	-2	10132	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTAGGCCGGAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	119870681	119872078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_119870804_119870958_119871126_119871875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014927	chr2	-	1937	1	Genic_Genomic	ENSMUSG00000027293.14	novel	NA	NA	NA	NA	63499	4	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTCCTAGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	119921588	119919651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_119919700_119921600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014928	chr2	-	2407	3	ISM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	52217	638	52217	-638	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCATGAGTTCGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	119932870	119920293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_119922166_119927443_119927609_119932500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014929	chr2	-	410	1	ISM	ENSMUSG00000033808.17	ENSMUST00000090042.12	2874	20	48348	0	48348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	120186202	120185792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_120185800_120186200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014930	chr2	-	1137	3	ISM	ENSMUSG00000027288.17	ENST00000565611.5	3961	18	11464	14265	11464	-14251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGTGCTGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	120358858	120354345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_120355106_120357229_120357566_120358817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014931	chr2	+	485	4	FSM	ENSMUSG00000027287.15	ENST00000567094.5	564	4	2	77	2	-77	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTTATTTACTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	120415631	120421578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_120415674_120416036_120416086_120416639_120416758_120421302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014932	chr2	+	331	4	ISM	ENSMUSG00000027287.15	ENST00000397138.5	422	5	13	2566	13	-2566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCACAGAAAAGGTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120415642	120427256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120415674_120416036_120416086_120416639_120416758_120427123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014933	chr2	+	636	3	ISM	ENSMUSG00000027287.15	ENST00000397138.5	422	5	1036	-333	1036	333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTGGTAAAGAGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	120416665	120430155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120416758_120427123_120427269_120429756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014934	chr2	+	298	1	Genic_Genomic	ENSMUSG00000027287.15	novel	NA	NA	NA	NA	5730	2	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCAGCACCTACAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	120421359	120421657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_120421400_120421700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014935	chr2	+	507	3	ISM	ENSMUSG00000027287.15	ENSMUST00000116437.8	2730	9	27132	1746	9680	168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCACTCTCATAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120425309	120429990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120425438_120427123_120427269_120429756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014936	chr2	+	473	1	ISM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	33112	0	15634	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGACCAGTAATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	120431263	120431736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120431300_120431700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014937	chr2	+	715	5	FSM	ENSMUSG00000027285.14	ENST00000568876.5	711	5	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATAGTGGAGCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	120439929	120449761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_120440027_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014938	chr2	+	395	1	ISM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	11783	0	11571	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	120451646	120452041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120451600_120452000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014939	chr2	+	629	3	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	57540	8297	57540	-8297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAGGTTCTCAGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	120519441	120524193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120519498_120523160_120523352_120523811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014940	chr2	+	771	2	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	61958	5922	61958	-5922	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTCAACACAAAAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	120523859	120526568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120524287_120526224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014941	chr2	+	469	1	ISM	ENSMUSG00000033705.18	ENSMUST00000180041.9	15004	32	72423	13869	70123	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTGGGCTGCTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120532024	120532493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120532000_120532500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014942	chr2	-	649	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	2409	-2	2134	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTAGGAGTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	120968725	120968076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_120968100_120968700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014943	chr2	+	720	6	ISM	ENSMUSG00000027259.16	ENST00000422466.6	947	8	3545	-1	3545	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTAGCCAAGATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	120976548	120986033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_120976602_120978721_120978804_120980700_120980828_120982910_120983050_120985199_120985301_120985815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014944	chr2	-	595	1	NIC	ENSMUSG00000050619.15	novel	2660	6	NA	NA	8849	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTGAGGAAGGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	120991756	120991161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_120991200_120991800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014945	chr2	-	1506	3	FSM	ENSMUSG00000050619.15	ENST00000568898.5	1378	3	-126	-2	15	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGCCAGCCCCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	121000731	120991170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_120992031_120999679_120999885_121000290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014946	chr2	-	1991	3	ISM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	3549	2418	3405	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAAGCCAGCCCCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	120997200	120991171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_120992031_120994227_120994684_120996524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014947	chr2	-	1370	3	NNC	ENSMUSG00000050619.15	novel	1378	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAAGCCAGCCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	121000604	120991172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_120992031_120999679_120999878_121000290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014948	chr2	-	999	2	NNC	ENSMUSG00000050619.15	novel	5072	5	NA	NA	3507	1366	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGTCTTATTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	120997098	120994255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_120994684_120996527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014949	chr2	-	1161	3	ISM	ENSMUSG00000050619.15	ENSMUST00000079024.12	2465	5	864	3242	720	1218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGTGATGACCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	120999885	120994403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_120994684_120996524_120997200_120999679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014950	chr2	-	2466	2	FSM	ENSMUSG00000050619.15	ENSMUST00000146243.2	2894	2	443	-15	-414	15	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAATATCCCACCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	121001163	120995606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_120997200_121000290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014951	chr2	-	1434	4	ISM	ENSMUSG00000050619.15	ENST00000684362.1	3015	7	76	165456	76	-1084	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTCCCATTCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	121001519	120996705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_120997200_120999679_120999885_121000290_121000748_121001241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014952	chr2	-	166	1	ISM	ENSMUSG00000043909.17	ENSMUST00000110647.8	9405	27	72925	3413	72293	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	121028897	121028731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121028700_121028900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014953	chr2	-	281	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	71588	220	71588	-220	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGATTCAAGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	121029602	121028953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121029089_121029456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014954	chr2	-	260	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	70942	770	70942	-770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCAGCCTCTGTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	121030248	121029503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121029603_121030087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014955	chr2	-	205	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	70311	1445	70311	-1445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGTTGCCATGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	121030879	121030178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121030288_121030783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014956	chr2	-	214	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	68005	2093	68005	-2093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGAGCTGGGTATATCC	NA	NA	NA	NA	NA	NA	NA	NA	121033185	121030826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121030879_121033023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014957	chr2	-	174	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	66256	4447	66256	-4447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGTCCTAGAAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	121034934	121033180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121033234_121034813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014958	chr2	-	179	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	65738	6169	65738	-6169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCATCAGGCAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	121035452	121034902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121035030_121035400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014959	chr2	-	236	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	62885	6749	62885	-6749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACAGACTGAGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	121038305	121035482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121035593_121038179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014960	chr2	-	175	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	62273	9784	62273	-9784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGATTCTACCAAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	121038917	121038517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121038611_121038835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014961	chr2	-	202	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	61557	10122	61557	-10122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGGACCACTGGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	121039633	121038855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121038986_121039561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014962	chr2	-	263	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	59318	10959	59318	-10959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTCTCTCAGCCATACA	NA	NA	NA	NA	NA	NA	NA	NA	121041872	121039692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121039834_121041750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014963	chr2	-	179	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	54940	13094	54940	-13094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTACACTCGTCACCCGC	NA	NA	NA	NA	NA	NA	NA	NA	121046250	121041827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121041904_121046147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014964	chr2	-	173	3	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	46969	17875	46969	-17875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACCAGATGTTACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	121054221	121046608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121046653_121051638_121051732_121054185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014965	chr2	-	176	3	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	42981	22964	42981	-22964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGCCCAGCAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	121058209	121051697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121051732_121054185_121054244_121058125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014966	chr2	-	251	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	42009	29458	42009	-29458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGAAACTGGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	121059181	121058191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121058330_121059068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014967	chr2	-	277	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	34968	30347	34968	-30347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCTATTGGTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	121066222	121059080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121059189_121066053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014968	chr2	-	221	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	26706	38506	26706	-38506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCAAAGAATTTCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	121074484	121067239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121067351_121074374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014969	chr2	-	250	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	23117	45686	23117	-45686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTGGCTCTCTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	121078073	121074419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121074578_121077981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014970	chr2	-	202	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	18716	49962	18716	-49962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGCAGCTCTCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	121082474	121078695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121078772_121082348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014971	chr2	-	180	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	14044	55443	14044	-55443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGATAGAACAGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	121087146	121084176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121084213_121087002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014972	chr2	-	166	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	11512	58316	11512	-58316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAACTCGGGTTCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	121089678	121087049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121087162_121089624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014973	chr2	-	169	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	762	60891	762	-60891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTGTGCCCTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	121100428	121089624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121089750_121100384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014974	chr2	-	207	2	ISM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	59	71977	59	-71977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCAGGTGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	121101131	121100710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121100791_121101004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014975	chr2	+	191	2	ISM	ENSMUSG00000027254.14	ENST00000300231.6	10155	6	11847	1815	11836	-1815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTGCATCCTACTATGT	NA	NA	NA	NA	NA	NA	NA	NA	121137770	121138102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121137858_121137998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014976	chr2	-	1637	1	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	38454	0	38454	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	121142678	121141041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121141000_121142700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014977	chr2	-	2073	5	ISM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	16132	377	16132	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTATGAAGCCAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	121165000	121141418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014978	chr2	+	653	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	85	11983	85	-11983	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGCAGGTGTTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	121244340	121257185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014979	chr2	+	437	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	8673	9103	8673	-9103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGACCGAATAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	121252928	121260065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121253009_121255005_121255124_121257075_121257184_121259934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014980	chr2	+	437	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	10786	6919	10786	-6919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATCCCTGGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	121255041	121262249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121255124_121257075_121257184_121259934_121260065_121262132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014981	chr2	+	558	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	15678	4987	15678	-4987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCTGCTCAGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121259933	121264181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121260065_121262132_121262250_121262754_121262881_121263997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014982	chr2	+	547	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	18499	3770	18499	-3770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTAAATCCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	121262754	121265398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121262881_121263997_121264181_121264465_121264575_121265269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014983	chr2	+	373	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	19870	2687	19870	-2687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGATTAGAGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	121264125	121266481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121264181_121264465_121264575_121265269_121265399_121266401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014984	chr2	+	377	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	20210	2272	20210	-2272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTTGTCCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	121264465	121266896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121264575_121265269_121265399_121266401_121266482_121266837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014985	chr2	+	628	4	ISM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	21012	743	21012	-743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGGAACAGTGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	121265267	121268425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121265399_121266401_121266482_121266837_121266896_121268066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014986	chr2	+	355	2	NNC	ENSMUSG00000027248.14	novel	2770	13	NA	NA	22606	-774	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGGGGGTTATTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	121266861	121268394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_121266889_121268066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014987	chr2	+	411	1	Genic_Genomic	ENSMUSG00000027248.14	novel	NA	NA	NA	NA	24509	7	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCCATAATTGTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	121268764	121269175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_121268800_121269200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014988	chr2	+	1150	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	-89	1995	81	135	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCAACTTCTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	121279586	121281906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_121279923_121280455_121280565_121281201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014989	chr2	+	532	3	FSM	ENSMUSG00000074884.13	ENST00000630046.2	734	3	202	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGGCAGTCCGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	121279707	121286264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_121279923_121280455_121280565_121286056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014990	chr2	+	236	2	ISM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	592	230	592	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGGAGCCAGTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	121280455	121281305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121280565_121281178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014991	chr2	+	308	1	ISM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	1788	2130	1600	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCCCACACCGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	121281463	121281771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121281500_121281800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014992	chr2	+	747	1	Genic_Genomic	ENSMUSG00000074884.13_ENSMUSG00000027245.12	novel	NA	NA	NA	NA	-614	2	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCAGTGAGTCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	121283156	121283903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_121283200_121283900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014993	chr2	+	210	1	NIC	ENSMUSG00000074884.13	novel	734	3	NA	NA	6191	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGGCAGTCCGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	121286054	121286264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_121286100_121286300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014994	chr2	+	1148	2	ISM	ENSMUSG00000027245.12	ENSMUST00000110612.8	4170	5	2553	1218	-1120	-953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTGGCTGGGAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	121286323	121287773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121287188_121287489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014995	chr2	+	965	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCCCCTTGGATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	121287441	121289155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014996	chr2	+	307	2	FSM	ENSMUSG00000027245.12	ENST00000458412.2	440	2	12	121	12	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTGATTTTCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121287598	121288605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_121287773_121288472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014997	chr2	+	187	1	NIC	ENSMUSG00000027245.12	novel	4170	5	NA	NA	956	3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTTTAGACATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121288542	121288729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_121288500_121288700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014998	chr2	-	880	1	ISM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	12953	0	12953	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTTCCTACTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	121291595	121290715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121290700_121291600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000014999	chr2	-	1005	3	ISM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	9246	1198	9246	-1198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACCTGTAATCCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	121295302	121291913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121292786_121292867_121292958_121295259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015000	chr2	-	1548	1	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	13207	0	13207	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGGCACATGCCCATA	NA	NA	NA	NA	NA	NA	NA	NA	121323939	121322391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121322400_121323900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015001	chr2	-	1955	5	ISM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	7069	1452	7069	-1452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATGTATTTAAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	121330077	121323843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015002	chr2	+	1572	1	ISM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	67679	0	67519	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGGGTTGTTTACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	121765129	121766701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121765100_121766700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015003	chr2	+	2319	3	ISM	ENSMUSG00000027236.9	ENST00000535391.5	937	7	18776	-1698	18776	1698	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCAATGAGAGGGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	121877918	121884579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121878032_121882222_121882297_121882447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015004	chr2	+	518	2	ISM	ENSMUSG00000027236.9	ENST00000535391.5	937	7	23070	0	23070	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTGCAACATGACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121882212	121882881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_121882297_121882447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015005	chr2	-	364	2	ISM	ENSMUSG00000033396.14	ENST00000535302.6	7002	38	63858	0	63788	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTACCTATACAGCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	121885015	121884332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121884542_121884860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015006	chr2	+	2173	1	Genic_Genomic	ENSMUSG00000027236.9	novel	NA	NA	NA	NA	25766	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTTTCTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121884908	121887081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_121884900_121887100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015007	chr2	-	483	4	ISM	ENSMUSG00000033396.14	ENST00000535302.6	7002	38	59965	1530	59895	-1502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCGGTTCTACCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	121888908	121885862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121886003_121886177_121886267_121886546_121886716_121888823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015008	chr2	-	565	2	ISM	ENSMUSG00000033396.14	ENST00000535302.6	7002	38	53057	5848	52987	397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTCCTTATAATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121895816	121890180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121890319_121895389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015009	chr2	-	1160	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	52738	-1	52668	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCATACACTACTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	121896135	121890576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121890851_121891402_121891543_121895389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015010	chr2	-	1040	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	51932	889	51862	-889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGTGCCTCCATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	121896941	121891466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121891543_121895389_121896138_121896725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015011	chr2	-	1057	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	49491	4881	49421	-4881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTCAAGTGCCGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	121899382	121895458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121896138_121896725_121896941_121899219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015012	chr2	-	615	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	45389	10767	45319	-10767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTTATACACATACACA	NA	NA	NA	NA	NA	NA	NA	NA	121903484	121901344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121901547_121902535_121902791_121903326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015013	chr2	-	478	3	NNC	ENSMUSG00000033396.14	novel	6260	32	NA	NA	24820	-32060	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTAGCTGCGGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	121923983	121922637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_121922849_121923441_121923622_121923896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015014	chr2	-	675	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	9905	41604	9835	-41604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTCCTGCTCCTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	121938968	121932181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121932260_121934388_121934535_121938517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015015	chr2	-	681	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	6587	47936	6517	-47936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTGTATCCGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	121942286	121938513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121938967_121939173_121939312_121942196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015016	chr2	-	500	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	5153	48652	5083	-48652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTAACTCTGCCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	121943720	121939229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121939312_121942196_121942390_121943495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015017	chr2	-	472	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	3603	51747	3533	-51747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGCAGCTGGAGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	121945270	121942324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121942390_121943495_121943721_121945088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015018	chr2	-	500	3	ISM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	47	53050	-23	-53050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGAAAGAACCTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	121948826	121943627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121943721_121945088_121945271_121948601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015019	chr2	-	591	5	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	1486	39	1486	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCAATTAGTTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	121955182	121951677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015020	chr2	+	879	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	-19	0	19	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCAGACATTGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121978166	121983583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015021	chr2	+	849	3	NNC	ENSMUSG00000060802.9	novel	860	4	NA	NA	11	18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCCAGACATTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	121978177	121983582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_121978286_121981353_121981644_121983131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015022	chr2	+	774	3	NIC	ENSMUSG00000060802.9	novel	860	4	NA	NA	75	18	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCCAGACATTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	121978241	121983582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_121978286_121981353_121981633_121983131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015023	chr2	-	281	1	ISM	ENSMUSG00000027224.15	ENSMUST00000110538.8	2467	5	3019	1358	2997	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCTGAAGAGATGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	122134310	122134029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_122134000_122134300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015024	chr2	-	325	2	ISM	ENSMUSG00000027224.15	ENSMUST00000028653.14	1026	6	2066	64	2066	-64	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTTCCTCTGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	122135241	122134289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_122134480_122135106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015025	chr2	+	471	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	323	21121	323	-21121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTACCTAGAGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	122154829	122157018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_122155006_122156463_122156640_122156899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015026	chr2	+	456	3	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	16082	2873	16082	-2873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACACCTGTGCCAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	122170588	122175266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_122170684_122174545_122174700_122175059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015027	chr2	+	392	2	ISM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	22511	87	22511	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGTGTCTTGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	122177017	122178052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_122177108_122177750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015028	chr2	+	387	1	ISM	ENSMUSG00000033268.9	ENSMUST00000099461.4	5267	33	31600	314	23246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAAGCAAAAACTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	122177752	122178139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_122177800_122178100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015029	chr2	-	670	1	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	16167	0	16167	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGATTTCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	122425617	122424947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_122424900_122425600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015030	chr2	-	815	3	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	13094	518	13094	-518	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTATCAGATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	122428690	122425465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_122426091_122427852_122427970_122428617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015031	chr2	-	781	5	ISM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	122	6222	122	-6222	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAGGCTGGCTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	122441662	122431169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015032	chr2	-	4101	1	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	17306	0	17306	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTATTTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	122527253	122523152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_122523200_122527300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015033	chr2	-	4145	2	ISM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	16505	93	16505	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTTCAAATGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	122528054	122523245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_122527254_122527917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015034	chr2	+	1053	3	ISM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	5619	2091	5619	-2091	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTCCTCAAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	122586041	122589304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_122586134_122587974_122588062_122588430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015035	chr2	+	1028	1	ISM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	9945	0	9945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGTTTATCAGACACCG	NA	NA	NA	NA	NA	NA	NA	NA	122590367	122591395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_122590400_122591400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015036	chr2	+	510	3	ISM	ENSMUSG00000027200.18	ENSMUST00000103238.2	3165	17	4007	6742	4007	-6742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACCACAGGTCGTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	124499561	124500487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_124499782_124499890_124500023_124500329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015037	chr2	+	988	3	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	6232	2941	6172	-480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTGAGGTCCCACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	124501726	124506749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_124501805_124502163_124502265_124505940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015038	chr2	+	554	2	ISM	ENSMUSG00000027200.18	ENST00000558816.5	4338	19	52145	1850	8563	-773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATTGAGTCACGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	124504117	124506456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_124504156_124505940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015039	chr2	+	1222	2	ISM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	11544	1383	11484	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTCCATACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	124507038	124508307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_124507867_124507913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015040	chr2	+	989	2	NNC	ENSMUSG00000027200.18	novel	5510	17	NA	NA	11715	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTCCATACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	124507269	124508307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_124507865_124507913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015041	chr2	+	837	1	ISM	ENSMUSG00000027200.18	ENSMUST00000103239.10	6225	19	56361	0	13299	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGCCTTTTGATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	124508853	124509690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_124508900_124509700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015042	chr2	+	297	2	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	48	9852	48	-9852	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGCCGTGGCCCGACG	NA	NA	NA	NA	NA	NA	NA	NA	125089157	125089816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125089322_125089683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015043	chr2	+	592	4	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	294	858	2	-858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTTTAACTTTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	125089403	125098810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015044	chr2	+	680	3	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	9657	-140	9365	140	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGACTTAGAAGATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	125098766	125099808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125098844_125098989_125099061_125099276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015045	chr2	+	309	1	ISM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	10250	0	9958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTGGAGAACATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	125099359	125099668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125099400_125099700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015046	chr2	+	584	1	Genic_Genomic	ENSMUSG00000027203.16	novel	NA	NA	NA	NA	10546	3	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATGTTTTAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	125099947	125100531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_125099900_125100500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015047	chr2	+	1696	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	-4	-1	-4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTGTCTAATAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	125515010	125516706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_125515000_125516700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015048	chr2	-	1072	1	ISM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	27764	0	27648	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTGTGTGCATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	125673295	125672223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_125672200_125673300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015049	chr2	-	681	1	ISM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	26858	1297	26742	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGGTTCTTGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	125674201	125673520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_125673500_125674200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015050	chr2	-	896	4	ISM	ENSMUSG00000027206.14	ENSMUST00000110462.8	1853	13	22798	85	22782	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTAGACAACCCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	125678161	125673603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015051	chr2	+	206	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	163	105220	163	-105220	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGAATTTCTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	125708189	125720287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125708306_125720197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015052	chr2	+	216	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	12168	95600	12168	-95600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTTAGGATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	125720194	125729907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125720287_125729783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015053	chr2	+	210	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	21754	90152	21754	-90152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAGGTAAATCGATGC	NA	NA	NA	NA	NA	NA	NA	NA	125729780	125735355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125729908_125735272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015054	chr2	+	240	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	27246	86794	27246	-86794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACCATTATGTCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	125735272	125738713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125735364_125738564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015055	chr2	+	249	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	30536	53927	30536	-53927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGCACTGAGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	125738562	125771580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125738712_125771480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015056	chr2	+	179	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	63448	52261	63448	-52261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGCTGCATGGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	125771474	125773246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125771580_125773172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015057	chr2	+	210	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	65204	36689	65204	-36689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAACCCTACAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	125773230	125788818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125773326_125788703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015058	chr2	+	288	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	80745	8183	80745	-8183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGACATGTATGAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	125788771	125817324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125788915_125817179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015059	chr2	+	286	2	ISM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	109214	388	109214	-388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGCATAGCTTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	125817240	125825119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125817382_125824974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015060	chr2	+	1087	1	ISM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	124079	0	117106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTCATCTGCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	125825132	125826219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125825100_125826200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015061	chr2	+	339	2	ISM	ENSMUSG00000027208.15	ENSMUST00000064794.14	2672	4	52	55543	52	-53919	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGAGTAGCAATCAACGC	NA	NA	NA	NA	NA	NA	NA	NA	125876629	125877562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125876771_125877364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015062	chr2	+	1726	3	FSM	ENSMUSG00000027208.15	ENSMUST00000110442.2	2287	3	371	190	371	-190	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTTTTCAAGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	125877263	125932251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_125877921_125930154_125930259_125931286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015063	chr2	+	232	2	FSM	ENSMUSG00000027208.15	ENST00000514120.1	227	2	0	-5	0	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGTATTTGAGAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	125930156	125931486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_125930259_125931356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015064	chr2	+	142	1	ISM	ENSMUSG00000027208.15	ENSMUST00000064794.14	2672	4	54763	1623	1184	1	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACATGGTATTTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	125931340	125931482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_125931300_125931500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015065	chr2	+	305	1	Genic_Genomic	ENSMUSG00000027208.15	novel	NA	NA	NA	NA	2653	9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAATTGACTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	125932809	125933114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_125932800_125933100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015066	chr2	-	205	2	ISM	ENSMUSG00000027209.18	ENST00000561064.5	440	5	8485	-1	8485	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGTACCTGTGAAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	125958051	125942878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_125942955_125957922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015067	chr2	-	332	3	ISM	ENSMUSG00000027209.18	ENST00000561064.5	440	5	522	15041	522	-15041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATATGCCATTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	125966014	125957920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_125958050_125962902_125963002_125965910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015068	chr2	-	164	3	ISM	ENSMUSG00000027209.18	ENST00000561064.5	440	5	1	20096	1	-20096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTCTCTCAGATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	125966535	125962975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_125963002_125965910_125966013_125966499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015069	chr2	+	1274	4	FSM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	0	2	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGCCCTTACCTTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	125996460	126007197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_125996781_126000329_126000474_126001689_126001949_126006646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015070	chr2	+	229	1	ISM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	12587	320	6320	5	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCAGCTCGTCCAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	126006647	126006876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_126006600_126006900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015071	chr2	-	924	1	NIC	ENSMUSG00000027360.6	novel	2392	12	NA	NA	23930	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCGCTTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	126436608	126435684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_126435700_126436600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015072	chr2	-	937	2	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	23680	87	23680	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCATTATTTTGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	126436858	126435771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_126436607_126436756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015073	chr2	-	560	1	ISM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	47567	0	47485	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGGTTTCCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	126469921	126469361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_126469400_126469900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015074	chr2	-	1800	4	ISM	ENSMUSG00000027361.16	ENST00000220429.12	2651	9	25421	0	25385	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATAGCTCCATGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	126492021	126470838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015075	chr2	-	1472	1	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	45096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATAGCTCCATGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	126472310	126470838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_126470800_126472300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015076	chr2	-	1522	3	NNC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	28838	-135	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTCTATTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	126488568	126470973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_126472303_126481148_126481256_126488482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015077	chr2	-	1384	8	FSM	ENSMUSG00000027361.16	ENST00000429662.6	1400	8	16	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGAGTGCAGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	126517426	126480935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492407_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015078	chr2	+	790	2	ISM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	50778	195	50778	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAAAGGATTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	126600057	126601015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_126600173_126600340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015079	chr2	-	1849	2	ISM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	28187	2186	28187	-2186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTAAGGCAAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126746968	126734496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_126736207_126746829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015080	chr2	+	1098	7	ISM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	9861	0	9835	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	126922447	126939004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015081	chr2	-	479	1	ISM	ENSMUSG00000074825.5	ENSMUST00000132773.2	3424	3	4192	0	3340	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAACTGGAATCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	126981170	126980691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_126980700_126981200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015082	chr2	-	1334	1	NIC	ENSMUSG00000074825.5	novel	3424	3	NA	NA	749	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGCAAATGTGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	126983761	126982427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_126982400_126983800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015083	chr2	-	1360	2	FSM	ENSMUSG00000074825.5	ENST00000439118.3	1852	2	2	490	2	-469	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGCTTTGCCCCTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	126985201	126982917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_126984211_126985134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015084	chr2	-	359	1	ISM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	6520	0	6324	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTTAGTTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	127083216	127082857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127082900_127083200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015085	chr2	+	217	1	ISM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	12983	0	12918	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTTCCGGTCTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	127102810	127103027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_127102800_127103000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015086	chr2	+	1483	4	FSM	ENSMUSG00000027368.7	ENSMUST00000028846.7	1617	4	68	66	68	-66	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATATTTATATAGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	127178146	127180230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_127178558_127178696_127178819_127179168_127179389_127179500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015087	chr2	-	340	4	ISM	ENSMUSG00000027376.16	ENST00000317620.14	2779	24	12021	0	11941	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTCTAGCTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	127371364	127370409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127370525_127370665_127370739_127371051_127371159_127371319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015088	chr2	-	342	4	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	11023	378	10947	-378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGGGCTGCCAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	127372358	127371052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127371159_127371319_127371410_127372039_127372100_127372272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015089	chr2	-	315	3	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	8575	2350	8499	-2350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCAGAGGGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127374806	127373024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127373118_127373728_127373801_127374656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015090	chr2	-	326	3	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	6321	3982	6245	-3982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCGAGGGGGGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	127377060	127374656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127374804_127376744_127376830_127376966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015091	chr2	-	366	3	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	4763	6298	4687	-6298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCGGTGAGCGGGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	127378618	127376972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127377059_127377464_127377589_127378462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015092	chr2	-	368	3	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	4386	6819	4310	-6819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTGGGAGAGTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127378995	127377493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127377589_127378462_127378616_127378875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015093	chr2	-	460	4	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	2593	8247	2517	-8247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCGCCCCTACTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	127380788	127378921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127379036_127379249_127379314_127380177_127380253_127380581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015094	chr2	-	353	3	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	2188	9522	2112	-9522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGCATGGTCCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	127381193	127380196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127380253_127380581_127380788_127381102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015095	chr2	-	354	3	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	1870	9918	1794	-9918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGCCAGGTGCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	127381511	127380592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127380788_127381102_127381193_127381442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015096	chr2	-	393	3	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	1261	10765	1185	-10765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATACAGTTGGCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	127382120	127381439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127381507_127381696_127381818_127381915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015097	chr2	-	442	3	ISM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	97	11340	21	-11340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCGCTGTGGGGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127383284	127382014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127382119_127382431_127382482_127382996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015098	chr2	-	1449	2	ISM	ENSMUSG00000034800.16	ENST00000617923.4	1706	3	924	-8	924	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAGGAGATGCAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	127419711	127418181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127418563_127418643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015099	chr2	-	1374	2	NNC	ENSMUSG00000034800.16	novel	1706	3	NA	NA	987	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTATAGTCTAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	127419648	127418189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_127418549_127418633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015100	chr2	-	1418	2	NNC	ENSMUSG00000034800.16	novel	1706	3	NA	NA	948	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTATAGTCTAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	127419687	127418189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_127418554_127418633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015101	chr2	-	1074	2	NNC	ENSMUSG00000034800.16	novel	1706	3	NA	NA	1301	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTATAGTCTAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	127419334	127418189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_127418563_127418633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015102	chr2	+	1288	2	Antisense	novelGene_ENSMUSG00000034800.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCAGTGTGAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	127418189	127419555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_127418581_127418658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015103	chr2	-	1078	2	NNC	ENSMUSG00000034800.16	novel	1706	3	NA	NA	1246	-49	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTCTGAATTTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	127419389	127418238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_127418561_127418633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015104	chr2	-	1353	4	FSM	ENSMUSG00000034800.16	ENSMUST00000164551.2	1284	4	-13	-56	5	56	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTTCTGCCAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	127423441	127418798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015105	chr2	-	1332	4	FSM	ENSMUSG00000034800.16	ENST00000611147.1	1324	4	-6	-2	-6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCATGAGCTAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	127423452	127418869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_127419904_127420523_127420638_127422816_127422944_127423395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015106	chr2	-	1309	4	NNC	ENSMUSG00000034800.16	novel	1324	4	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGCATGAGCTAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	127423435	127418870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_127419899_127420523_127420638_127422816_127422944_127423395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015107	chr2	-	1314	4	NNC	ENSMUSG00000034800.16	novel	1324	4	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGGAAGCATGAGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	127423443	127418873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_127419904_127420523_127420638_127422816_127422944_127423400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015108	chr2	-	765	2	ISM	ENSMUSG00000034800.16	ENST00000622059.4	1485	4	499	754	481	-359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGCAGGAAGCCTTACG	NA	NA	NA	NA	NA	NA	NA	NA	127422947	127419230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_127419865_127422816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015109	chr2	+	476	3	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	4613	10933	4613	-10933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGCCGAGCTCCCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	127433754	127437816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_127433872_127436363_127436490_127437583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015110	chr2	+	504	2	ISM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	15162	2835	15162	-2835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGCTGTGTGATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	127444303	127445914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_127444442_127445548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015111	chr2	+	453	1	Genic_Genomic	ENSMUSG00000027374.13	novel	NA	NA	NA	NA	19156	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCCAATAACTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	127448297	127448750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_127448300_127448800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015112	chr2	-	219	1	NIC	ENSMUSG00000027375.15	novel	2778	4	NA	NA	21078	37	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATTCAAGCCATATTCG	NA	NA	NA	NA	NA	NA	NA	NA	127476975	127476756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_127476800_127477000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015113	chr2	-	309	2	FSM	ENSMUSG00000027375.15	ENST00000349807.3	271	2	-3	-35	-3	32	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCCATATTCAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	127498056	127476761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_127476975_127497960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015114	chr2	-	803	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCAAAGCCTTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	127634409	127633305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_127633753_127634053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015115	chr2	-	780	2	ISM	ENSMUSG00000074813.15	ENSMUST00000239302.2	794	5	98387	-572	2877	317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGTTAGCCAGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128172856	128142228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_128142917_128172764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015116	chr2	-	1969	3	FSM	ENSMUSG00000074813.15	ENSMUST00000239221.2	1999	3	30	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACAGTTTTTCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	128271281	128158096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_128159593_128172764_128172970_128271013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015117	chr2	-	1107	2	FSM	ENSMUSG00000074813.15	ENSMUST00000239199.2	1105	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTCTTAGCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	128271792	128214019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_128214348_128271013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015118	chr2	-	611	5	ISM	ENSMUSG00000014355.11	ENST00000616781.4	1276	9	5866	0	5866	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGATGTCTGTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	128522115	128517590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015119	chr2	-	637	4	ISM	ENSMUSG00000014355.11	ENST00000616781.4	1276	9	14	4723	14	4655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTCTTTATGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	128527967	128522313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_128522386_128524693_128524873_128526421_128526584_128527743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015120	chr2	+	764	1	ISM	ENSMUSG00000014353.16	ENSMUST00000110325.8	4807	19	35380	0	35195	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	NA	NA	NA	NA	NA	NA	NA	128695417	128696181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_128695400_128696200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015121	chr2	+	726	5	ISM	ENSMUSG00000027386.10	ENST00000409903.5	1061	7	12344	1	12344	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACATTGTGGGCAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	128731618	128737569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015122	chr2	+	1456	1	ISM	ENSMUSG00000027386.10	ENSMUST00000110324.8	3228	9	32598	0	18224	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTTTCTAGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	128737498	128738954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_128737500_128739000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015123	chr2	+	1214	1	Genic_Genomic	ENSMUSG00000027395.16	novel	NA	NA	NA	NA	24355	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGATTTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128967301	128968515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_128967300_128968500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015124	chr2	+	739	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	111	475	111	-475	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCAACCAGATAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	128971730	128975579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015125	chr2	+	455	1	ISM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	3980	0	3980	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTAGGTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128975599	128976054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_128975600_128976100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015126	chr2	-	1850	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	96	-3	96	3	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGAGGAAATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	129041018	129039168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_129039200_129041000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015127	chr2	+	757	2	ISM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	7	11633	7	-11626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGAACGGCTTGATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	129040690	129041903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_129040913_129041368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015128	chr2	+	737	2	ISM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	159	11286	159	-11286	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTGAATTTTAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	129041388	129042243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_129041985_129042102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015129	chr2	+	750	3	ISM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	8685	1716	8685	-1716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTAACTGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	129049914	129051813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_129050460_129050960_129051144_129051791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015130	chr2	+	712	1	ISM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	12141	0	11595	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGCTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	129052824	129053536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_129052800_129053500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015131	chr2	-	538	1	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	28465	0	28465	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	129110667	129110129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_129110100_129110700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015132	chr2	-	699	2	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	26449	544	26449	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGTACAAAGGGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	129112683	129110673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_129111184_129112494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015133	chr2	-	916	3	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	11804	7280	11804	-7280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCTGTCTTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	129127328	129117409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_129117566_129123811_129124020_129126776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015134	chr2	-	651	3	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	838	17353	838	-17353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTCTGAAAGACAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	129138294	129127482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_129128021_129132877_129132930_129138233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015135	chr2	-	1150	4	FSM	ENSMUSG00000027399.2	ENST00000263339.4	1148	4	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGGTTTTCTAGGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	129151030	129141968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_129142785_129148383_129148613_129149802_129149852_129150974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015136	chr2	-	1052	2	ISM	ENSMUSG00000027399.2	ENST00000263339.4	1148	4	2409	0	2409	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGGTTTTCTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	129148622	129141971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_129142785_129148383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015137	chr2	+	849	3	FSM	ENSMUSG00000037902.19	ENST00000381580.5	845	3	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAACAGCCAGCGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	129450893	129458393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_129451174_129457366_129457685_129458142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015138	chr2	-	828	3	FSM	ENSMUSG00000027400.12	ENST00000217305.3	835	3	9	-2	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTCCATGGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	129540409	129529911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_129530536_129531656_129531798_129540346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015139	chr2	-	623	1	NIC	ENSMUSG00000027400.12	novel	2386	4	NA	NA	9882	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCCCTCCATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129530536	129529913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_129529900_129530500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015140	chr2	+	1685	1	ISM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	30086	0	30086	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	129672522	129674207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_129672500_129674200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015141	chr2	+	620	4	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	682	11837	682	-11837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAATATGGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	129978348	129983213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_129978592_129979295_129979415_129980747_129980877_129983084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015142	chr2	+	670	3	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	7472	7840	7472	-7840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGATCAGAGGGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	129985138	129987210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_129985225_129985291_129985535_129986869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015143	chr2	+	603	3	ISM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	9268	0	9268	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGACTTTGTCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	129986934	129995050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_129987212_129993193_129993349_129994879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015144	chr2	-	1140	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	23	-2	23	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATTTGTCTTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	130021300	130013552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015145	chr2	-	678	5	ISM	ENSMUSG00000027404.17	ENST00000438552.6	831	6	1726	0	1726	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATACATACAGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	130017361	130013573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130013722_130014522_130014649_130014955_130015095_130015526_130015680_130017249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015146	chr2	-	266	2	FSM	ENSMUSG00000027404.17	ENST00000461548.1	257	2	-5	-4	-5	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCCTCTTCAGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	130019092	130018564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_130018673_130018934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015147	chr2	-	111	1	Genic_Genomic	ENSMUSG00000027404.17	novel	NA	NA	NA	NA	411	3	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGACCCTCTTCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	130018676	130018565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_130018600_130018700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015148	chr2	-	389	1	ISM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	6207	0	6207	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATTGAAGAGTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	130259991	130259602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130259600_130260000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015149	chr2	-	127	1	ISM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	5193	1276	5193	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTCGGGGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	130261005	130260878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130260900_130261000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015150	chr2	+	922	3	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	18261	-4	18261	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTTGTGTTCAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	130284545	130286193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_130284604_130285215_130285320_130285433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015151	chr2	+	3219	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	82	977	82	-977	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGTTCCGAGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	130405743	130409638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015152	chr2	+	2809	1	ISM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	2145	0	2145	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGCTTTTTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	130407806	130410615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_130407800_130410600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015153	chr2	-	311	1	ISM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	4959	0	4959	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCAATTCTGTGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	130475008	130474697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130474700_130475000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015154	chr2	-	521	2	ISM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	4136	482	4136	-418	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCCCAAGATGGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	130475831	130475179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130475410_130475540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015155	chr2	-	323	2	ISM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	1792	3017	1792	-2953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAGGAAACTAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	130478175	130477714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130477825_130477962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015156	chr2	-	416	2	ISM	ENSMUSG00000037703.15	ENSMUST00000089561.10	4169	4	881	3645	833	-3642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCGGACCATGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	130479134	130478403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130478548_130478862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015157	chr2	-	359	2	ISM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	112	4390	112	-4326	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGGAGAGACCTGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	130479855	130479087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130479340_130479748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015158	chr2	-	309	1	Genic_Genomic	ENSMUSG00000068290.12	novel	NA	NA	NA	NA	10393	2	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCCAGAAGTCCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	130496186	130495877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_130495900_130496200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015159	chr2	-	631	6	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	2852	71	2852	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTTGTTTGTAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130503727	130495950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015160	chr2	-	302	3	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	2506	4629	2506	-4629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCCATCACTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	130504073	130500508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130500632_130503656_130503759_130503996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015161	chr2	-	425	3	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	1103	7776	1103	-7776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGACCCTGGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	130505476	130503655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130503759_130503996_130504110_130505267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015162	chr2	-	451	3	ISM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	0	8171	0	-8171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGAAACTACGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	130506579	130504050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130504110_130505267_130505475_130506394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015163	chr2	+	702	4	ISM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	6629	165	6629	-165	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTTCTTGTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	130516158	130523369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_130516191_130517548_130517665_130521254_130521332_130522892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015164	chr2	+	509	1	Genic_Genomic	ENSMUSG00000074797.12	novel	NA	NA	NA	NA	13498	2	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTCTTGAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	130523027	130523536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_130523000_130523500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015165	chr2	-	753	3	ISM	ENSMUSG00000074796.11	ENST00000380056.7	2814	17	7238	0	7238	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATGCAGTCGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	130526973	130526036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130526424_130526531_130526702_130526777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015166	chr2	-	772	2	ISM	ENSMUSG00000027316.16	ENSMUST00000110240.10	1426	6	2612	0	2206	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTTTCTGTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	130882396	130881551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130882246_130882318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015167	chr2	-	705	3	ISM	ENSMUSG00000027318.18	ENST00000617732.1	1156	5	4725	-1	4725	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGTCATCGAAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	130898402	130894789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130894883_130894961_130895071_130897899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015168	chr2	-	550	3	ISM	ENSMUSG00000027318.18	ENST00000617732.1	1156	5	17	3497	17	-3497	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAGCAGCAAAGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	130903110	130898287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130898713_130900581_130900659_130903062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015169	chr2	-	1059	4	ISM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	8258	-1	8258	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGAGGTTAGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	130993682	130988243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015170	chr2	-	821	1	ISM	ENSMUSG00000027329.10	ENSMUST00000028801.8	2328	8	16146	55	4065	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTATTACTGTGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	131013056	131012235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_131012200_131013100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015171	chr2	-	887	2	ISM	ENSMUSG00000027329.10	ENSMUST00000110218.9	2600	7	3246	642	3246	-642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCTGTCCTCTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	131013875	131012877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_131013711_131013821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015172	chr2	-	1724	1	FSM	ENSMUSG00000068267.6	ENSMUST00000089510.5	4886	1	3162	0	3162	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGATGTGTATCATATTA	NA	NA	NA	NA	NA	NA	NA	NA	131018825	131017101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_131017100_131018800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015173	chr2	+	1148	2	ISM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	10020	232	10020	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATGCACACAAACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	131038897	131040185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_131039009_131039148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015174	chr2	+	1124	1	Genic_Genomic	ENSMUSG00000027330.17	novel	NA	NA	NA	NA	10419	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTTATGCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	131039296	131040420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_131039300_131040400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015175	chr2	+	1169	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	13	339	13	311	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGGAGCAGCATACTGC	NA	NA	NA	NA	NA	NA	NA	NA	131052372	131055095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_131052602_131053182_131053394_131054366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015176	chr2	+	814	1	NIC	ENSMUSG00000068264.12	novel	1432	4	NA	NA	2097	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	131054620	131055434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_131054600_131055400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015177	chr2	+	269	2	ISM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	7828	4755	7828	-4755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGCATAGAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	131083852	131085190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_131083970_131085038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015178	chr2	+	300	1	ISM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	13659	0	13621	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	131089645	131089945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_131089600_131089900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015179	chr2	+	296	2	ISM	ENSMUSG00000027333.19	ENSMUST00000110180.2	1617	8	20123	8757	20123	-8757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGAGGAATTCAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	131354035	131358330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_131354138_131358136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015180	chr2	+	1078	2	ISM	ENSMUSG00000027333.19	ENSMUST00000110189.9	1919	6	28581	0	28531	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	131362443	131367092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_131363092_131366662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015181	chr2	+	284	2	ISM	ENSMUSG00000027333.19	ENSMUST00000110180.2	1617	8	29018	2986	29018	-2986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCCCTGCCCTACACA	NA	NA	NA	NA	NA	NA	NA	NA	131362930	131364101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_131363092_131363978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015182	chr2	+	774	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	7	1403	7	-1403	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGATGTGAAGATGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	131751854	131778946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_131751924_131754114_131754213_131778339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015183	chr2	+	643	1	Genic_Genomic	ENSMUSG00000079037.10	novel	NA	NA	NA	NA	27861	2	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCGGGGTTTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	131779708	131780351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_131779700_131780400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015184	chr2	-	1541	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTGTTATTGATT	NA	NA	NA	NA	NA	NA	NA	NA	132089678	132081410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015185	chr2	-	708	1	ISM	ENSMUSG00000027341.11	ENSMUST00000110164.8	2957	3	7455	0	7455	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132082119	132081411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132081400_132082100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015186	chr2	-	723	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	147	742	-6	-740	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCTAACTGTCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	132089580	132082153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015187	chr2	-	119	1	ISM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	4034	0	4034	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTTGTGCAAAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	132091200	132091081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132091100_132091200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015188	chr2	-	198	2	ISM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	3434	443	3434	-443	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGAGAAAACTAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	132091800	132091524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132091616_132091693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015189	chr2	-	182	2	ISM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	1968	657	1968	-657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCCTACAGTAACACTC	NA	NA	NA	NA	NA	NA	NA	NA	132093266	132091738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132091818_132093163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015190	chr2	-	147	2	ISM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	1556	2198	1556	-2198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTGTGATATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	132093678	132093279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132093359_132093610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015191	chr2	-	122	2	ISM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	1329	2558	1329	-2558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGATGTGGAGCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	132093905	132093639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132093679_132093822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015192	chr2	-	189	2	ISM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	393	2756	393	-2756	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCGAAGCACCAAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	132094841	132093837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132093921_132094735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015193	chr2	+	923	2	FSM	ENSMUSG00000087377.2	ENSMUST00000124336.2	921	2	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTTTAAAGATAATATT	NA	NA	NA	NA	NA	NA	NA	NA	132095277	132103256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_132095450_132102505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015194	chr2	+	1174	4	FSM	ENSMUSG00000058793.15	ENSMUST00000110158.8	1247	4	1	72	1	-72	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTTTTTTTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	132105068	132138041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015195	chr2	+	2303	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	46600	0	23809	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132151667	132153970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_132151700_132154000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015196	chr2	-	374	1	ISM	ENSMUSG00000027346.16	ENSMUST00000110136.8	3546	19	48731	1	48677	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGCTTCCTGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	132371376	132371002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132371000_132371400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015197	chr2	+	728	2	ISM	ENSMUSG00000044991.11	ENSMUST00000110132.3	1471	3	1666	298	1666	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTTAGCCATAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132533868	132592677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_132534052_132592132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015198	chr2	+	697	1	Genic_Genomic	ENSMUSG00000044991.11	novel	NA	NA	NA	NA	60079	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTCAGTCTATTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	132592281	132592978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_132592300_132593000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015199	chr2	-	1127	1	ISM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	10721	0	10721	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	132647253	132646126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132646100_132647300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015200	chr2	-	1195	2	ISM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	9255	300	9255	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTCTGAAAGAAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	132648719	132646426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_132647533_132648630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015201	chr2	+	585	4	ISM	ENSMUSG00000027357.17	ENST00000452938.5	1687	6	66	4377	66	-4045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAGGTAAGATACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	132688790	132704316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_132689046_132691785_132691924_132696812_132696943_132704254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015202	chr2	+	818	4	ISM	ENSMUSG00000027357.17	ENST00000452938.5	1687	6	8123	375	7194	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTAAAGGTGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	132696847	132708318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_132696943_132704254_132704324_132706009_132706102_132707756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015203	chr2	+	609	1	ISM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	19499	12	18431	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGCCTTGCACTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132708084	132708693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_132708100_132708700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015204	chr2	-	278	1	FSM	ENSMUSG00000083879.5	ENSMUST00000121500.2	807	1	556	-27	556	27	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTATAAGCAGAAACCACT	NA	NA	NA	NA	NA	NA	NA	NA	134604994	134604716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_134604700_134605000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015205	chr2	+	613	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	14	-147	14	147	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTATGAATAATGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	134645882	134646495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_134645900_134646500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015206	chr2	+	1064	2	ISM	ENSMUSG00000051177.17	ENST00000637919.1	4626	29	149278	523	149278	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTGTTGACCTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	135241166	135314916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135241287_135313972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015207	chr2	+	1072	1	ISM	ENSMUSG00000051177.17	ENSMUST00000131552.5	7202	33	686381	1728	222479	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATGCAAAAATGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	135314367	135315439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135314400_135315400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015208	chr2	+	1089	1	ISM	ENSMUSG00000051177.17	ENSMUST00000110116.8	7003	32	688010	1	224200	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCTGGACCTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	135316088	135317177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135316100_135317200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015209	chr2	+	357	3	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	224	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGCCCAAAATCATTG	NA	NA	NA	NA	NA	NA	NA	NA	135491050	135493987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_135491123_135493417_135493482_135493766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015210	chr2	+	127	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	44	105900	44	-105498	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAAGGTATGGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	135719346	135749490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135719402_135749418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015211	chr2	+	123	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	30128	105067	30128	-104665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGGTAAATGCAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	135749430	135750323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135749500_135750269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015212	chr2	+	136	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	54866	75129	54866	-74727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGACTAACTTAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	135774168	135780261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135774223_135780179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015213	chr2	+	150	3	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	61860	66401	61860	-65999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTTATTCCCATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	135781162	135788989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135781231_135781866_135781925_135788965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015214	chr2	+	124	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	74612	59093	74612	-58691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACATCAGAATACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	135793914	135796297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135794007_135796265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015215	chr2	+	134	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	81293	51680	81293	-51278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCGGTTGCAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	135800595	135803710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135800658_135803638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015216	chr2	+	146	2	ISM	ENSMUSG00000039943.17	ENST00000278655.8	5170	36	84346	47664	84346	-45989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTACCACGAACATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	135803648	135808999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135803740_135808944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015217	chr2	+	168	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	90532	45069	90532	-44667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGCTGGTTGCCAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	135809834	135810321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135809922_135810240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015218	chr2	+	119	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	93008	41649	93008	-41247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGACGGGGTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	135812310	135813741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135812366_135813677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015219	chr2	+	116	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	95648	37302	95648	-36900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCTTCCTTTGGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	135814950	135818088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135814997_135818018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015220	chr2	+	126	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	104649	30459	104649	-30057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAGAAAGGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	135823951	135824931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135824042_135824895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015221	chr2	+	149	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	116942	14730	116942	-14328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAATCTAAGGTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	135836244	135840660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135836330_135840596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015222	chr2	+	127	2	ISM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	122823	10889	122823	-10487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGCTAAGATTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	135842125	135844501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135842230_135844478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015223	chr2	+	1678	2	ISM	ENSMUSG00000039943.17	ENST00000278655.8	5170	36	135601	0	135601	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAGAAGTCATGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	135854903	135856663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_135855172_135855253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015224	chr2	-	3181	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATACAATCCTTACTAAG	NA	NA	NA	NA	NA	NA	NA	NA	136733310	136715697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015225	chr2	-	380	1	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	50302	0	50302	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	139962182	139961802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_139961800_139962200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015226	chr2	-	622	2	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	2509	44362	2509	-44362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGTTAGATAAAGACGC	NA	NA	NA	NA	NA	NA	NA	NA	140009975	140006164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140006503_140009691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015227	chr2	-	386	2	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	13	48262	13	-48262	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAGAAAGCGAAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	140012471	140010064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140010376_140012396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015228	chr2	-	353	3	ISM	ENSMUSG00000074764.12	ENST00000378072.5	1530	16	94645	0	94645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGTCTCAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	140087414	140072686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140072816_140085833_140085909_140087265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015229	chr2	-	135	1	NIC	ENSMUSG00000074764.12	novel	2216	20	NA	NA	109238	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTTGTCTCAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	140072821	140072686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_140072700_140072800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015230	chr2	-	312	3	ISM	ENSMUSG00000074764.12	ENST00000378072.5	1530	16	92114	13148	92114	-13148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTATAAAACAGATCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	140089945	140085834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140085909_140087265_140087415_140089856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015231	chr2	-	273	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	91521	14608	91521	-14608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGATCATGCAGAACG	NA	NA	NA	NA	NA	NA	NA	NA	140090538	140087294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140087415_140089856_140089945_140090473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015232	chr2	-	290	4	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	83107	17170	83107	-17170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTACCACAAACACGGC	NA	NA	NA	NA	NA	NA	NA	NA	140098952	140089856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140089945_140090473_140090537_140097199_140097278_140098891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015233	chr2	-	266	4	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	77415	17787	77415	-17787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTCAATAAGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	140104644	140090473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140090537_140097199_140097278_140098891_140098961_140104588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015234	chr2	-	298	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	74354	31902	74354	31184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTAAGTTGATCCCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	140107705	140104588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140104644_140105288_140105444_140107617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015235	chr2	-	302	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	74212	32599	74212	30487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTACACAGAAAAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	140107847	140105285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140105444_140107617_140107700_140107785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015236	chr2	-	344	4	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	64569	34953	64569	28133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGAAAGTGGCAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	140117490	140107639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140107700_140107785_140107846_140108279_140108334_140117320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015237	chr2	-	318	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	54829	35599	54829	27487	internal_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGGTAAAGTCAACACT	NA	NA	NA	NA	NA	NA	NA	NA	140127230	140108285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140108334_140117320_140117484_140127123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015238	chr2	-	442	3	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	35360	44629	35360	18457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGGAGACAATGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	140146699	140117315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_140117484_140127123_140127227_140146528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015239	chr2	+	3406	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	13	133	13	-130	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATGAAAGCATGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	140237367	140264741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015240	chr2	+	2068	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTGACAGATAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	142904958	142914780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015241	chr2	+	1241	4	ISM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	246887	0	246887	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCTATGTGTGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	143635016	143655948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_143635225_143637863_143637965_143642923_143643152_143655244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015242	chr2	+	705	1	NIC	ENSMUSG00000027419.10	novel	4723	12	NA	NA	267114	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCTATGTGTGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	143655243	143655948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_143655200_143655900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015243	chr2	+	579	2	ISM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	43	4646	43	-4646	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTTCCTGTGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	143757282	143780598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_143757568_143780304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015244	chr2	+	643	3	ISM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	23081	924	23081	-924	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGCCTCTAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	143780320	143784320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_143780613_143781871_143781949_143784046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015245	chr2	+	316	2	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	23117	-3305	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCCAGGTAGGAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	143780356	143781939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_143780613_143781879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015246	chr2	+	323	2	NNC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	23127	-3293	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTAGACTTGCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	143780366	143781951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_143780610_143781871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015247	chr2	+	293	2	ISM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	24619	995	24619	-995	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAATTTGTCTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	143781858	143784249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_143781949_143784046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015248	chr2	-	354	1	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	63515	0	63515	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	143789668	143789314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_143789300_143789700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015249	chr2	-	372	2	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	62891	200	62891	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGTCTGTATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	143790292	143789514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_143789850_143790255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015250	chr2	-	321	2	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	46360	15842	46360	-15842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGGCCAGCCCGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	143806823	143805156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_143805336_143806681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015251	chr2	-	353	3	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	42643	17411	42643	-17411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGATGCTGAAAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	143810540	143806725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_143806821_143809359_143809514_143810436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015252	chr2	-	348	2	ISM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	22918	27065	22918	11393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCACTGCAGGGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143830265	143816379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_143816530_143830067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015253	chr2	-	731	2	ISM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	22539	163	22539	-163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGATGTTGCAGTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	143830644	143827935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_143828090_143830067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015254	chr2	-	349	2	ISM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	32	4298	32	-4298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGGAGACGTCGTATG	NA	NA	NA	NA	NA	NA	NA	NA	143853151	143832070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_143832187_143852918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015255	chr2	-	620	1	Genic_Genomic	ENSMUSG00000027423.16	novel	NA	NA	NA	NA	19831	1	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTCTGACTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	144092661	144092041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_144092000_144092700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015256	chr2	-	612	3	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	16749	746	16749	-746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCTGTCTGAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	144095743	144092788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144093153_144094364_144094451_144095581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015257	chr2	-	259	2	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	15748	3539	15748	-3539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGTGTTTCTTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	144096744	144095581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144095742_144096645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015258	chr2	-	197	3	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	15630	3629	15630	-3629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTAAAAAGCAAAGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	144096862	144095671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144095742_144096645_144096733_144096822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015259	chr2	-	204	3	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	15157	4602	15157	-4602	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTAGGAATTATTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	144097335	144096644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144096733_144096822_144096863_144097259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015260	chr2	-	224	3	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	14966	4780	14966	-4780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAAGTTTTGTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	144097526	144096822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144096863_144097259_144097336_144097418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015261	chr2	-	186	2	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	14973	5208	14973	-5208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCTGAGGTGGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	144097519	144097250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144097336_144097418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015262	chr2	-	202	2	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	13377	5376	13377	-5376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATGTTTACCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	144099115	144097418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144097525_144099019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015263	chr2	-	228	2	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	12579	6969	12579	-6969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTTTGAGAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	144099913	144099011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144099116_144099789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015264	chr2	-	364	3	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	9735	7742	9735	-7742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTTCTATTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	144102757	144099784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144099914_144100976_144101099_144102644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015265	chr2	-	257	3	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	8546	9017	8546	-9017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGAGAAGATGCAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	144103946	144101059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144101099_144102644_144102756_144103839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015266	chr2	-	222	3	ISM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	112	10680	112	-10680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTACAAGGCAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	144112380	144102722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144102756_144103839_144103945_144112296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015267	chr2	-	313	3	ISM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	39	11839	39	-11839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGAGAGAGATAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	144112787	144103881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144103945_144112296_144112380_144112620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015268	chr2	+	643	3	ISM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	1210	1431	1210	-1431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGGTGCCGTAAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	144114070	144121005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144114405_144118234_144118452_144120913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015269	chr2	+	573	1	ISM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	9752	3	9711	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAAGGTGTATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	144122571	144123144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144122600_144123100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015270	chr2	+	1805	2	FSM	ENSMUSG00000083674.4	ENST00000538547.4	1798	2	-2	-5	-2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGCAAGACCTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	144301132	144308526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_144301325_144306913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015271	chr2	+	1799	2	NIC	ENSMUSG00000083674.4	novel	1798	2	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGCAAGACCTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	144301134	144308526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_144301321_144306913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015272	chr2	-	1692	2	Antisense	novelGene_ENSMUSG00000083674.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGGGCTCCAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	144308522	144301241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_-_144301328_144306916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015273	chr2	+	1651	2	NNC	ENSMUSG00000083674.4	novel	1798	2	NA	NA	78	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACACATGCAAGACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	144301277	144308522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_144301325_144306918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015274	chr2	+	1628	1	NIC	ENSMUSG00000083674.4	novel	1802	2	NA	NA	516	2	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACACATGCAAGACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	144306895	144308523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_144306900_144308500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015275	chr2	-	442	4	ISM	ENSMUSG00000037259.16	ENST00000357236.8	2355	18	7573	22077	-1413	-12751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTAAGACTGAGCTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	144346364	144333684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144333815_144343346_144343440_144344837_144344952_144346259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015276	chr2	-	674	4	ISM	ENSMUSG00000037259.16	ENST00000357236.8	2355	18	69	34708	69	-25382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCCTGTCCCACCCATA	NA	NA	NA	NA	NA	NA	NA	NA	144353868	144346315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144346378_144348078_144348165_144352087_144352156_144353410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015277	chr2	+	1743	1	ISM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	12535	0	12505	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTCTGGTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	144382172	144383915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144382200_144383900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015278	chr2	-	764	1	ISM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	7841	0	7841	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	144384948	144384184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144384200_144384900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015279	chr2	-	867	3	ISM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	2788	1052	2788	-1052	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATCTTGAATTTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	144390001	144385236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_144385930_144386293_144386380_144389913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015280	chr2	+	611	4	ISM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	2949	23758	0	-23710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGGTTAGTGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	144401124	144408911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144401362_144404051_144404110_144406485_144406573_144408682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015281	chr2	+	325	2	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	7556	23515	7556	-23515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGCGCTGGACACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	144408680	144409106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144408920_144409020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015282	chr2	+	422	3	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	8675	21487	8675	-21487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTTCACGTCGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	144409799	144411134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144409948_144410535_144410695_144411019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015283	chr2	+	364	3	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	9446	18099	9446	-18099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGTGGGCTTTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	144410570	144414522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144410695_144411019_144411136_144414398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015284	chr2	+	356	4	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	9913	12317	9913	-12317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTCTTGGCATCTACT	NA	NA	NA	NA	NA	NA	NA	NA	144411037	144420304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144411136_144414398_144414523_144416586_144416668_144420251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015285	chr2	+	346	3	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	19132	8604	19132	-8604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATGGGGACAGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	144420256	144424017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144420342_144421216_144421324_144423863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015286	chr2	+	358	4	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	20089	5088	20089	-5088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATCTCCATTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	144421213	144427533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144421324_144423863_144424018_144425610_144425689_144427517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015287	chr2	+	310	3	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	27163	3139	27163	-3139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTAAGCCTTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	144428287	144429482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144428381_144428785_144428942_144429421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015288	chr2	+	537	3	ISM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	27650	112	27650	-112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCCTGCTAATTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	144428774	144432509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144428942_144429421_144429488_144432205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015289	chr2	+	349	1	ISM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	34145	0	31196	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	144432320	144432669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144432300_144432700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015290	chr2	+	471	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	144435973	144437286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_144436126_144436967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015291	chr2	+	432	2	NNC	ENSMUSG00000074754.5	novel	471	2	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	144436005	144437286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_144436119_144436967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015292	chr2	+	475	2	ISM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	147034	216	147034	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACTGTGAGTCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	144588850	144610462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144588994_144610130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015293	chr2	+	485	1	ISM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	168377	0	168377	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTTCTGTAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	144610193	144610678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_144610200_144610700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015294	chr2	+	1802	1	ISM	ENSMUSG00000001768.17	ENSMUST00000110005.8	4641	12	99835	0	99699	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGTCTTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	145727734	145729536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_145727700_145729500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015295	chr2	+	905	3	ISM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	9151	0	9098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	145754311	145758345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_145754449_145757453_145757600_145757723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015296	chr2	+	471	1	Genic_Genomic	ENSMUSG00000002728.15	novel	NA	NA	NA	NA	12663	2	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAATCATCCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	145757876	145758347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_145757900_145758300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015297	chr2	-	865	3	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	169366	74124	169255	-74124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACTTCATTATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	146184564	146176409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_146176536_146182298_146182371_146183897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015298	chr2	-	806	2	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	166440	81763	166329	-81763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGAAGATGAGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	146187490	146184048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_146184670_146187305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015299	chr2	-	720	5	ISM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	76091	164249	75980	-164249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCAGAGGTACCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	146277839	146266534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015300	chr2	+	662	2	ISM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	61887	0	61887	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	146916802	146919920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_146916947_146919402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015301	chr2	+	523	1	Genic_Genomic	ENSMUSG00000027433.6	novel	NA	NA	NA	NA	64484	2	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCTGGTGTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	146919399	146919922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_146919400_146919900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015302	chr2	+	220	2	FSM	ENSMUSG00000086509.3	ENST00000655574.1	233	2	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTCTGCAGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	147149515	147149872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_147149650_147149786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015303	chr2	-	438	1	FSM	ENSMUSG00000074743.5	ENSMUST00000099270.5	3723	1	3285	0	3285	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCATCTCCTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	148246823	148246385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_148246400_148246800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015304	chr2	+	645	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	2	309	2	-309	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATAGCAAGTGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	148514547	148517638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_148514756_148517201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015305	chr2	+	527	1	Genic_Genomic	ENSMUSG00000036992.11	novel	NA	NA	NA	NA	2877	2	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTAAATCTTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	148517422	148517949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_148517400_148517900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015306	chr2	-	1164	5	ISM	ENSMUSG00000027438.15	ENST00000398425.7	1699	10	29324	0	29319	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAACCATCTTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	148545068	148538575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015307	chr2	+	687	3	FSM	ENSMUSG00000027445.4	ENSMUST00000028935.4	687	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTATAATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	148677067	148680659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_148677353_148678593_148678708_148680371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015308	chr2	-	865	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTTGTTTCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	148717497	148713637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_148713964_148714736_148714851_148717072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015309	chr2	-	764	3	NNC	ENSMUSG00000027447.7	novel	860	3	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	148717403	148713641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_148713961_148714736_148714851_148717072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015310	chr2	-	745	3	NNC	ENSMUSG00000027447.7	novel	860	3	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	148717377	148713641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_148713964_148714732_148714851_148717072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015311	chr2	-	838	3	NNC	ENSMUSG00000027447.7	novel	860	3	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	148717482	148713641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_148713964_148714736_148714851_148717080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015312	chr2	-	3392	1	ISM	ENSMUSG00000068134.14	ENSMUST00000109931.8	4033	3	18881	0	18845	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCCTGAGACTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	149959717	149956325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_149956300_149959700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015313	chr2	-	3420	3	ISM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	16785	538	16719	-538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTCTAAGAGAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	149961843	149956863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_149960121_149961484_149961549_149961744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015314	chr2	+	196	1	Genic_Genomic	ENSMUSG00000095315.3	novel	NA	NA	NA	NA	3116	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTTGGGGAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	150168737	150168933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_150168700_150168900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015315	chr2	-	312	1	Genic_Genomic	ENSMUSG00000082740.2	novel	NA	NA	NA	NA	312	5	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATTATCTGAGGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	150311583	150311271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_150311300_150311600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015316	chr2	-	508	2	FSM	ENSMUSG00000082740.2	ENST00000590964.5	542	2	0	34	0	20	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGGACAGTGTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	150311895	150311310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_150311582_150311658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015317	chr2	-	980	1	Genic_Genomic	ENSMUSG00000033096.8	novel	NA	NA	NA	NA	24509	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCTGATTATTACTC	NA	NA	NA	NA	NA	NA	NA	NA	150425978	150424998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_150425000_150426000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015318	chr2	-	1394	4	NNC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	21407	-216	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGAATTGGGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	150429080	150425215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015319	chr2	+	531	1	ISM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	44493	0	44493	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTATCTGCATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	150673147	150673678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_150673100_150673700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015320	chr2	+	269	2	ISM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	18463	231	18463	-231	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTAGAGCACCTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	150769976	150772969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_150770037_150772760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015321	chr2	+	232	1	Genic_Genomic	ENSMUSG00000027454.11	novel	NA	NA	NA	NA	21457	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCTCCTGGTAGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	150772970	150773202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_150773000_150773200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015322	chr2	-	744	1	ISM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	8970	0	8970	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTAGAGTGATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	150872348	150871604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_150871600_150872300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015323	chr2	-	752	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	111	531	111	-531	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAACTAAGGGAAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	150881207	150872135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_150872837_150881156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015324	chr2	+	398	3	ISM	ENSMUSG00000027455.17	ENSMUST00000089140.13	1486	10	7	10520	7	-10515	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCTTTGAGAGGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	151336108	151342710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151336333_151338503_151338602_151342634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015325	chr2	+	313	3	ISM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	2316	8127	2305	-8127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCATAAGGGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	151338528	151345098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151338602_151342634_151342710_151344933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015326	chr2	-	255	2	Antisense	novelGene_ENSMUSG00000027455.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGGAAGGAGCAAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	151345099	151342628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_-_151342716_151344931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015327	chr2	+	364	3	ISM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	8718	5851	8707	-5851	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTAGAGGGTAAGCAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	151344930	151347374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151345100_151346030_151346124_151347272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015328	chr2	+	322	3	ISM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	9837	4921	9826	-4921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAGCAGTGTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	151346049	151348304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151346124_151347272_151347383_151348166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015329	chr2	+	795	4	ISM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	11077	0	11066	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACCAATTCTGTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	151347289	151353225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151347383_151348166_151348305_151351428_151351594_151352826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015330	chr2	+	267	1	ISM	ENSMUSG00000027455.17	ENSMUST00000089140.13	1486	10	16862	0	16740	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTCTGTTATATAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	151352963	151353230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151353000_151353200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015331	chr2	+	585	4	ISM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	2	2071	2	-1626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTACTTAATGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	151384404	151401541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015332	chr2	+	1074	4	FSM	ENSMUSG00000032966.15	ENST00000678408.1	1073	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAGAGACTTGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	151384526	151403167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_151384665_151384737_151384786_151399305_151399386_151402359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015333	chr2	+	312	3	ISM	ENSMUSG00000032966.15	ENST00000618612.5	1419	4	36	2071	36	-1627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGTACTTAATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	151384563	151401540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151384665_151384737_151384786_151401377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015334	chr2	+	253	3	ISM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	324	2154	199	-1709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCCACTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	151384726	151401458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151384786_151399305_151399419_151401377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015335	chr2	+	560	3	ISM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	14888	803	14763	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAACAGCACAAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	151399290	151402809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_151399419_151401377_151401541_151402540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015336	chr2	+	259	2	NNC	ENSMUSG00000032966.15	novel	1419	4	NA	NA	16867	-510	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTTTGCTTCGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	151401394	151402657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_151401537_151402540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015337	chr2	+	307	1	Genic_Genomic	ENSMUSG00000032966.15	novel	NA	NA	NA	NA	18779	1	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCATGGAGGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	151403306	151403613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_151403300_151403600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015338	chr2	-	1566	1	ISM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	23933	0	23933	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTTTTGGTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	151559297	151557731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_151557700_151559300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015339	chr2	-	1774	3	ISM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	20433	1314	20433	1139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGGACCCTGATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	151562797	151559045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_151560606_151561404_151561564_151562742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015340	chr2	-	1423	1	Genic_Genomic	ENSMUSG00000027459.17	novel	NA	NA	NA	NA	2575	1	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGACTCTTCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	151812739	151811316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_151811300_151812700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015341	chr2	-	1633	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	-1	122	-1	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTCTTCCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	151822140	151811439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_151812845_151821912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015342	chr2	+	1396	4	FSM	ENSMUSG00000027463.15	ENST00000645534.1	1395	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTGTAGGCTCACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	151846040	151850069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_151846632_151847462_151847940_151849400_151849525_151849865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015343	chr2	+	1388	4	NNC	ENSMUSG00000027463.15	novel	1395	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTAGGCTCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	151846042	151850068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_151846627_151847462_151847940_151849400_151849525_151849865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015344	chr2	+	651	2	FSM	ENSMUSG00000027463.15	ENST00000675066.1	1122	2	475	-4	475	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGCCCCACCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	151846515	151847997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_151846632_151847462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015345	chr2	+	536	1	NIC	ENSMUSG00000027463.15	novel	2669	5	NA	NA	1422	5	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGCCCCACCTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	151847462	151847998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_151847500_151848000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015346	chr2	+	2812	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACAGTTTTGGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	151947443	151953296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_151947868_151950908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015347	chr2	+	3123	3	ISM	ENSMUSG00000074698.11	ENST00000349736.10	3961	12	48524	-3	48459	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCATGCAGCCTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	152117314	152123772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152117467_152118866_152118954_152120888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015348	chr2	+	2923	2	NNC	ENSMUSG00000074698.11	novel	3509	11	NA	NA	50011	-49	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGTCTTTAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	152118866	152123720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_152118958_152120888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015349	chr2	+	2889	1	Genic_Genomic	ENSMUSG00000074698.11	novel	NA	NA	NA	NA	52029	1	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATGCAGCCTGAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	152120884	152123773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_152120900_152123800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015350	chr2	+	147	2	ISM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	11118	5942	11118	-5942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCAACCCTCAGCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	152146865	152149974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152146947_152149908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015351	chr2	+	167	2	ISM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	14223	5625	14223	-5625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCTGATGCCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	152149970	152150291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152150096_152150249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015352	chr2	+	178	2	ISM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	14507	3530	14507	-3530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTATACGACTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	152150254	152152386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152150352_152152305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015353	chr2	+	161	2	ISM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	17547	2256	17547	-2256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATCAACTCAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	152153294	152153660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152153425_152153629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015354	chr2	+	149	1	Genic_Genomic	ENSMUSG00000027465.14	novel	NA	NA	NA	NA	20021	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTTTGTATCATCGCT	NA	NA	NA	NA	NA	NA	NA	NA	152155768	152155917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_152155800_152155900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015355	chr2	-	219	2	ISM	ENSMUSG00000027466.16	ENST00000353660.7	1830	11	14054	0	14002	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCAGTGAACAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	152160330	152158714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152158835_152160231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015356	chr2	-	121	1	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	15497	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCAGTGAACAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	152158835	152158714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_152158700_152158800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015357	chr2	-	256	2	ISM	ENSMUSG00000027466.16	ENST00000353660.7	1830	11	13188	1914	13136	-1914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGTCTTGGCAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	152161196	152160628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152160732_152161043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015358	chr2	-	218	2	ISM	ENSMUSG00000027466.16	ENST00000353660.7	1830	11	10268	2328	10216	-2328	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACAGGGACCTTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	152164116	152161042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152161224_152164079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015359	chr2	-	248	2	ISM	ENSMUSG00000027466.16	ENST00000353660.7	1830	11	9129	5393	9077	-5393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTGCTGGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	152165255	152164107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152164192_152165091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015360	chr2	-	227	2	ISM	ENSMUSG00000027466.16	ENST00000353660.7	1830	11	8022	6487	7970	-6487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGAGCCTGGTGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	152166362	152165201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152165253_152166186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015361	chr2	-	221	2	ISM	ENSMUSG00000027466.16	ENST00000353660.7	1830	11	6146	7728	6094	-7728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCCTTACCTCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	152168238	152166442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152166561_152168135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015362	chr2	-	192	2	ISM	ENSMUSG00000027466.16	ENST00000353660.7	1830	11	5122	9524	5070	-9524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGGAATGGAGACGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	152169262	152168238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152168335_152169166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015363	chr2	-	1734	3	ISM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	821	0	821	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	152185131	152179341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152180608_152181634_152181928_152184956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015364	chr2	-	156	1	ISM	ENSMUSG00000074678.2	ENSMUST00000099203.2	293	2	542	0	542	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTGTTCTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	152464431	152464275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152464300_152464400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015365	chr2	+	447	2	ISM	ENSMUSG00000000359.4	ENSMUST00000000369.4	1663	5	0	6944	0	-6944	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTCCCGTCCGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	152468870	152470170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152468967_152469819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015366	chr2	+	606	3	ISM	ENSMUSG00000000359.4	ENSMUST00000000369.4	1663	5	1162	1536	1162	-1536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTTACCATACCCT	NA	NA	NA	NA	NA	NA	NA	NA	152470032	152475578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152470356_152471096_152471177_152475375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015367	chr2	+	630	3	ISM	ENSMUSG00000000359.4	ENSMUST00000000369.4	1663	5	2224	403	2224	-403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGACCTTGCGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	152471094	152476711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152471177_152475375_152475578_152476365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015368	chr2	+	388	1	Genic_Genomic	ENSMUSG00000000359.4	novel	NA	NA	NA	NA	7857	1	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCAGGCCCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	152476727	152477115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_152476700_152477100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015369	chr2	+	457	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	460	-5	460	5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGGGTGTTGTAACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	152529414	152529871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_152529400_152529900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015370	chr2	+	2187	3	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	26018	2054	25991	1580	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACCATCCCTGCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	152537398	152548536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152537505_152542102_152542189_152546541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015371	chr2	+	679	4	ISM	ENSMUSG00000019188.17	ENST00000398174.9	1687	13	26063	0	26048	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGCCACCGTGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	152537455	152546938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152537505_152542102_152542189_152545914_152546062_152546541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015372	chr2	+	397	1	ISM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	35161	3652	35134	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGCCACCGTGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	152546541	152546938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152546500_152546900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015373	chr2	+	2014	1	Genic_Genomic	ENSMUSG00000019188.17	novel	NA	NA	NA	NA	37171	2	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTCTTCTTATTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	152548578	152550592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_152548600_152550600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015374	chr2	+	939	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGACTTCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	152578166	152579331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_152578666_152578891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015375	chr2	+	1028	1	FSM	ENSMUSG00000042745.10	ENSMUST00000109824.2	1160	1	132	0	132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGTGACTTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	152578302	152579330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_152578300_152579300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015376	chr2	-	3189	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	-614	-7	3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTGGCTCTGCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	152673200	152622584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_152624203_152671346_152672023_152672305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015377	chr2	-	490	1	ISM	ENSMUSG00000007659.19	ENST00000307677.5	2553	3	49472	0	49153	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	152623077	152622587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152622600_152623100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015378	chr2	-	2298	3	FSM	ENSMUSG00000007659.19	ENST00000307677.5	2553	3	30	225	30	-204	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGCTTGCTGTGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	152672519	152622812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_152624203_152671346_152672041_152672305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015379	chr2	-	2026	3	FSM	ENSMUSG00000007659.19	ENST00000422920.2	2187	3	161	0	161	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAAGTCCACCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	152673042	152623400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_152624203_152671535_152672023_152672305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015380	chr2	-	546	2	ISM	ENSMUSG00000007659.19	ENST00000420488.6	2414	3	3	49009	3	-1336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCGGTACCGGAGAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	152673645	152671617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152672041_152673522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015381	chr2	+	1151	2	ISM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	44135	91	44135	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATTTCAACTTAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	152734049	152736483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152734221_152735503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015382	chr2	+	1741	1	Genic_Genomic	ENSMUSG00000027469.17	novel	NA	NA	NA	NA	45588	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	152735502	152737243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_152735500_152737200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015383	chr2	-	1215	1	FSM	ENSMUSG00000074676.3	ENSMUST00000099200.3	1311	1	101	-5	101	5	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCGCCTGCTGAATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	152775027	152773812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_152773800_152775000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015384	chr2	-	382	4	ISM	ENSMUSG00000042662.17	ENST00000278979.7	507	6	2574	0	2335	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGGCTGTCTCATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	152791041	152786069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_152786243_152787346_152787422_152788207_152788258_152790957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015385	chr2	+	487	4	ISM	ENSMUSG00000074673.16	ENST00000620043.4	801	8	23149	0	23149	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTAGGTACGTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	152841218	152844934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_152841278_152842020_152842218_152844163_152844278_152844817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015386	chr2	-	1251	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	NA	NA	NA	NA	NA	NA	NA	NA	152857325	152850809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015387	chr2	-	1007	2	FSM	ENSMUSG00000073236.5	ENSMUST00000128026.2	1898	2	145	746	145	-746	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAGAGACTTCAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	153187585	153183822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_153184785_153187540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015388	chr2	+	3818	1	ISM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	54361	0	54315	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCCTTGTCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	153242109	153245927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_153242100_153245900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015389	chr2	-	1457	1	Genic_Genomic	ENSMUSG00000056941.18	novel	NA	NA	NA	NA	14352	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATGGGTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	153460308	153458851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_153458900_153460300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015390	chr2	-	1525	3	ISM	ENSMUSG00000056941.18	ENSMUST00000109782.2	1343	10	10919	-745	10919	745	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCATGCCTACTAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	153463741	153460008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_153461433_153462365_153462415_153463689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015391	chr2	+	2969	4	ISM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	16651	3951	16651	-3951	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTGCTGTGGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	153599844	153611279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_153600053_153603455_153603578_153606866_153607020_153608793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015392	chr2	+	2529	1	Genic_Genomic	ENSMUSG00000027479.15	novel	NA	NA	NA	NA	29516	8	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTTTGGTTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	153612709	153615238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_153612700_153615200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015393	chr2	+	766	5	FSM	ENSMUSG00000027482.13	ENST00000375452.3	765	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGAGTGTTGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	153972262	153979557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_153972583_153975558_153975710_153978185_153978336_153979034_153979120_153979497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015394	chr2	+	1246	3	ISM	ENSMUSG00000038533.16	ENST00000397800.5	2915	11	68772	183	68772	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCTTGTGTAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	154370755	154377788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_154370826_154373141_154373333_154376803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015395	chr2	+	1048	1	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	98524	3304	74941	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGGACTGCATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	154376924	154377972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_154376900_154378000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015396	chr2	+	640	1	ISM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	102236	0	78653	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	154380636	154381276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_154380600_154381300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015397	chr2	+	448	1	ISM	ENSMUSG00000038523.11	ENSMUST00000045116.11	704	3	668	0	629	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTCTGCCACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	154391475	154391923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_154391500_154391900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015398	chr2	-	901	1	ISM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	9359	226	9187	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGGTTTGAAACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	154402453	154401552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_154401600_154402500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015399	chr2	-	923	3	ISM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	8259	714	8259	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTGCACGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	154403381	154402267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_154402856_154402950_154403171_154403266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015400	chr2	-	1650	1	ISM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	16301	0	16281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGCTTTGCAGTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	154429327	154427677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_154427700_154429300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015401	chr2	-	1766	2	ISM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	11440	673	11420	-673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTCTCTGTGTAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	154434188	154428350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_154430013_154434084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015402	chr2	-	326	1	NIC	ENSMUSG00000000876.12	novel	560	3	NA	NA	8117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAAGTTTTCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154437491	154437165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_154437200_154437500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015403	chr2	+	459	3	ISM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	70701	3252	70701	-3235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAGGAGGGACTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	154703777	154705929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_154703927_154705469_154705584_154705733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015404	chr2	+	371	1	NIC	ENSMUSG00000027593.16	novel	1759	9	NA	NA	75734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGCTTGTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154708810	154709181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_154708800_154709200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015405	chr2	-	2540	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTGCTTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154734853	154713329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015406	chr2	-	563	1	ISM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	20957	6	20804	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGCTCCATTGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154713898	154713335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_154713300_154713900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015407	chr2	-	1041	2	NNC	ENSMUSG00000074656.13	novel	2312	10	NA	NA	20011	-249	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATGAGCCAAGTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	154714691	154713586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_154714096_154714159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015408	chr2	-	862	1	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	14326	0	14326	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCTAAGTACCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	154902091	154901229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_154901200_154902100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015409	chr2	-	1221	4	ISM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	10420	452	10420	-452	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTGGATAAAATACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	154905997	154901681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015410	chr2	+	354	2	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	47039	42429	46993	-42429	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTAAGTAACCGTTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	155022471	155024271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155022632_155024077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015411	chr2	+	346	2	ISM	ENSMUSG00000027598.17	ENST00000665484.1	4015	25	48633	41114	48609	-39191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCATCTATGGGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	155024087	155027509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155024274_155027349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015412	chr2	+	246	2	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	51916	35274	51870	-35274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACATCAGTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	155027348	155031426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155027525_155031356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015413	chr2	+	288	3	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	58612	22501	58566	-22501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATTGGCTCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	155034044	155044199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155034131_155041254_155041384_155044126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015414	chr2	+	476	3	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	84475	111	84429	-111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTCAGAAACTTAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	155059907	155066589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155060008_155062127_155062201_155066286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015415	chr2	+	555	2	ISM	ENSMUSG00000027598.17	ENST00000665484.1	4015	25	91215	529	91191	-529	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTCCTATTGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	155066669	155068094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155066955_155067824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015416	chr2	+	320	1	ISM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	92875	152	92825	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTAATTAGCGATTT	NA	NA	NA	NA	NA	NA	NA	NA	155068303	155068623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155068300_155068600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015417	chr2	+	688	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTTTACTAGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	155078454	155092201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015418	chr2	+	437	2	NNC	ENSMUSG00000047459.15	novel	684	4	NA	NA	11245	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGTCTTTACTAGA	NA	NA	NA	NA	NA	NA	NA	NA	155089772	155092197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_155089859_155091846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015419	chr2	+	370	1	Genic_Genomic	ENSMUSG00000047459.15	novel	NA	NA	NA	NA	13301	1	mono-exon	FALSE	NA	NA	NA	NA	NA	386	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGTCTTTACTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	155091828	155092198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_155091800_155092200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015420	chr2	+	362	3	ISM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	156	864	156	-864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCAGCCTCCTACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	155118372	155119129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155118567_155118877_155118934_155119017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015421	chr2	+	183	2	ISM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	232	1051	232	-1051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCCCCCAGCCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	155118448	155118942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155118567_155118877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015422	chr2	+	351	3	ISM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	660	412	660	-412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGAGTTCTGGTCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	155118876	155119581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155118934_155119017_155119125_155119394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015423	chr2	+	230	1	Genic_Genomic	ENSMUSG00000027602.10	novel	NA	NA	NA	NA	1548	1	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTCCAGCTGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	155119764	155119994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_155119800_155120000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015424	chr2	-	386	1	Genic_Genomic	ENSMUSG00000038369.15	novel	NA	NA	NA	NA	49758	2	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAAGCTTTTCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	155232945	155232559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_155232600_155232900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015425	chr2	-	561	3	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	41089	196	41089	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTGTGTGTGAATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	155241614	155232771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155233141_155237639_155237792_155241574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015426	chr2	-	401	2	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	34977	12016	34977	8849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCACTGTTTAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	155247726	155244591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155244661_155247394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015427	chr2	-	882	3	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	25539	17468	25539	3397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGACCTGCCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155257164	155250043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155250371_155253444_155253567_155256731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015428	chr2	-	544	2	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	21757	24878	21757	-4013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATGGCACCACATAACCA	NA	NA	NA	NA	NA	NA	NA	NA	155260946	155257453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155257849_155260797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015429	chr2	-	533	2	ISM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	19433	28220	19433	1401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGCTTTCGTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	155263270	155260795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155260945_155262886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015430	chr2	-	454	2	ISM	ENSMUSG00000038369.15	ENSMUST00000109669.8	2379	6	17882	1232	17880	-1232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCCAGGGATCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	155264823	155263428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155263790_155264730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015431	chr2	-	542	3	ISM	ENSMUSG00000038369.15	ENST00000616167.1	3240	10	33008	22411	-3	-13655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTTACTTTGCCATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	155282708	155275851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155276009_155279779_155280060_155282603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015432	chr2	-	402	3	ISM	ENSMUSG00000038369.15	ENST00000374796.6	7174	16	19378	47250	-8549	-17615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGAATGTGCCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	155291254	155279811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155280060_155282603_155282706_155291202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015433	chr2	+	629	1	ISM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	44170	0	44011	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTTTTAGGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	155404037	155404666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155404000_155404700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015434	chr2	-	1051	5	ISM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	21151	-8	21151	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTGTTTCATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	155413483	155405100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015435	chr2	-	767	1	Genic_Genomic	ENSMUSG00000038324.14	novel	NA	NA	NA	NA	57296	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTTGTCCATGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	155476956	155476189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_155476200_155477000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015436	chr2	-	990	3	ISM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	56052	135	56052	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTCTCCATCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	155478200	155476362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155477061_155477155_155477363_155478115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015437	chr2	-	672	1	Genic_Genomic	ENSMUSG00000038312.11	novel	NA	NA	NA	NA	27050	1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGCATTAGCGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	155544267	155543595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_155543600_155544300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015438	chr2	-	878	3	ISM	ENSMUSG00000038312.11	ENST00000374491.3	1754	10	20320	-41	20320	41	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTTTGTGCTTATACA	NA	NA	NA	NA	NA	NA	NA	NA	155550997	155543902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155544513_155547574_155547697_155550851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015439	chr2	-	711	1	ISM	ENSMUSG00000074649.7	ENSMUST00000124586.2	1615	2	986	0	986	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGTACAAACCTATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	155660360	155659649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155659600_155660400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015440	chr2	-	943	2	FSM	ENSMUSG00000074649.7	ENSMUST00000124586.2	1615	2	9	663	9	-663	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCCCATACCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	155661337	155660312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_155661004_155661085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015441	chr2	-	1483	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	19	-2	19	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155668826	155661749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015442	chr2	-	1383	2	FSM	ENSMUSG00000027613.16	ENSMUST00000109638.2	1382	2	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTCCTTATGAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	155668582	155667083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_155668131_155668246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015443	chr2	-	698	1	Genic_Genomic	ENSMUSG00000005882.19	novel	NA	NA	NA	NA	82458	1	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATGGAAAAATTAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	155689498	155688800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_155688800_155689500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015444	chr2	-	1659	4	ISM	ENSMUSG00000005882.19	ENST00000374384.6	2117	10	42825	0	42818	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	155729138	155688801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155729028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015445	chr2	-	1093	2	NNC	ENSMUSG00000005882.19	novel	1955	8	NA	NA	81663	-145	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGAGGCGTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	155690293	155688985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_155689614_155689828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015446	chr2	-	1123	4	ISM	ENSMUSG00000005882.19	ENST00000374385.10	2183	11	71853	493	71846	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTATCCCCTCCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155700110	155689306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155700031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015447	chr2	-	649	4	ISM	ENSMUSG00000005882.19	ENSMUST00000006036.13	808	7	19608	-90	19600	90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGCACCACACGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	155752356	155690069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155690447_155693278_155693393_155700031_155700110_155752276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015448	chr2	-	163	2	ISM	ENSMUSG00000005882.19	ENSMUST00000109631.8	1091	8	43092	9878	42818	-9878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCAATCTTGGGATACG	NA	NA	NA	NA	NA	NA	NA	NA	155729138	155700056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155700110_155729028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015449	chr2	+	814	2	FSM	ENSMUSG00000078972.2	ENST00000374375.1	1298	2	485	-1	485	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAACCAGGGCTACACA	NA	NA	NA	NA	NA	NA	NA	NA	155783910	155796573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_155784651_155796499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015450	chr2	+	418	4	ISM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	9	9171	9	-9171	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAGGGGAGGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	155850009	155850899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015451	chr2	+	348	4	ISM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	312	7614	287	-7614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACGCCACAGGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	155850312	155852456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155850356_155850483_155850572_155850779_155850900_155852359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015452	chr2	+	301	3	NNC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	456	-7614	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACGCCACAGGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	155850481	155852456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_155850566_155850779_155850900_155852359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015453	chr2	+	472	4	ISM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	481	6883	456	-6883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGGGAGCAAAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	155850481	155853187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155850572_155850779_155850900_155852359_155852454_155853019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015454	chr2	+	323	3	ISM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	2358	6740	2333	-6740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCCAGGGTCAGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	155852358	155853330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155852454_155853019_155853186_155853268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015455	chr2	+	323	4	ISM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	3022	1379	2997	-1379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGACCACACCAACGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	155853022	155858691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155853186_155853268_155853331_155857908_155857941_155858625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015456	chr2	+	297	3	ISM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	8625	436	8600	-436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGGTATAGAGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	155858625	155859634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155858723_155858808_155858874_155859499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015457	chr2	+	340	4	ISM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	8806	0	8781	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCCCTTCCCCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	155858806	155860070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155858874_155859499_155859637_155859716_155859773_155859990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015458	chr2	+	508	2	ISM	ENSMUSG00000038180.12	ENSMUST00000038860.12	1473	12	26	3262	26	-3262	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAGCCAGGCCAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	155907189	155908159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_155907592_155908053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015459	chr2	-	851	1	NIC	ENSMUSG00000074643.13	novel	871	7	NA	NA	39206	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	155914615	155913764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_155913800_155914600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015460	chr2	-	155	2	ISM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	790	325	790	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGGAGTTCCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	155985310	155984031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155984163_155985286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015461	chr2	+	572	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATTTTTACCTAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	155985957	155987719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_155986201_155986378_155986510_155987521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015462	chr2	+	427	2	FSM	ENSMUSG00000067847.14	ENSMUST00000109597.10	550	2	123	0	116	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCTATTTTTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	155986275	155987714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_155986510_155987521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015463	chr2	-	1222	4	ISM	ENSMUSG00000027620.17	ENSMUST00000146297.8	2580	17	28762	-7	28762	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	155992738	155989158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015464	chr2	-	202	1	Genic_Genomic	ENSMUSG00000027620.17	novel	NA	NA	NA	NA	4606	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGATGGAATTTATGACC	NA	NA	NA	NA	NA	NA	NA	NA	156016894	156016692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_156016700_156016900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015465	chr2	-	318	3	ISM	ENSMUSG00000027620.17	ENSMUST00000109584.8	667	4	996	-1	338	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGATGGAATTTATGACC	NA	NA	NA	NA	NA	NA	NA	NA	156021162	156016692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_156016895_156019255_156019306_156021096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015466	chr2	-	401	2	ISM	ENSMUSG00000027620.17	ENSMUST00000109584.8	667	4	21	4397	21	-4397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACGCTAGTGAGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	156022137	156021090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_156021161_156021806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015467	chr2	+	1402	2	ISM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	107996	1434	107996	-1434	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGGTTCTGGTTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	156146557	156150438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156146735_156149213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015468	chr2	+	1388	1	Genic_Genomic	ENSMUSG00000038116.17	novel	NA	NA	NA	NA	111924	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCAGTCACATTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	156150485	156151873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_156150500_156151900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015469	chr2	-	491	1	Genic_Genomic	ENSMUSG00000046229.11	novel	NA	NA	NA	NA	412	1	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTGTGTCTTGCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	156154255	156153764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_156153800_156154300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015470	chr2	-	716	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	2	85	2	-85	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGGCTGAGCGGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	156154665	156153850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_156154323_156154421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015471	chr2	-	591	2	NNC	ENSMUSG00000046229.11	novel	803	2	NA	NA	29	-177	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGTGGAGATGCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	156154638	156153942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_156154317_156154421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015472	chr2	-	3137	3	FSM	ENSMUSG00000085546.2	ENSMUST00000131801.2	3215	3	79	-1	79	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGACTGAACTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	156181222	156174235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_156176535_156176964_156177376_156180795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015473	chr2	+	313	2	ISM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	106	18193	106	-17377	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGTTTGGCATTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	156389621	156392699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156389804_156392568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015474	chr2	+	435	2	ISM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	3651	12110	3639	-12110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTACAGGTGAGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	156393154	156397966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156393370_156397746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015475	chr2	+	1022	2	ISM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	8293	450	8281	-450	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCACGGGTTCCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	156397796	156409626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156397977_156408784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015476	chr2	+	298	1	Genic_Genomic	ENSMUSG00000027628.11	novel	NA	NA	NA	NA	21080	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTCAGTTTTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	156410595	156410893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_156410600_156410900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015477	chr2	+	297	2	ISM	ENSMUSG00000061689.16	ENSMUST00000070782.13	3303	11	6453	51916	6453	-51640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTACGTGCAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	156548994	156553183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156549049_156552940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015478	chr2	+	428	2	ISM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	40741	155	40294	66	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCTTCAGTATGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	156603705	156604889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156603849_156604604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015479	chr2	+	463	3	ISM	ENSMUSG00000067818.7	ENSMUST00000088552.7	1128	4	0	1011	0	-514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACACGGGAGACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	156617339	156622567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156617427_156620438_156620649_156622401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015480	chr2	-	373	2	Antisense	novelGene_ENSMUSG00000067818.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGAGGGGCGGGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	156622564	156620436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_-_156620645_156622399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015481	chr2	+	197	2	FSM	ENSMUSG00000067818.7	ENST00000346786.2	384	2	83	104	83	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGACGAGATGTACCGCGA	NA	NA	NA	NA	NA	NA	NA	NA	156620519	156622977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_156620649_156622909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015482	chr2	+	532	3	ISM	ENSMUSG00000067818.7	ENSMUST00000088552.7	1128	4	3199	409	102	88	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCAGCTCCCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	156620538	156623169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156620649_156622401_156622564_156622909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015483	chr2	+	505	3	NNC	ENSMUSG00000067818.7	novel	1128	4	NA	NA	130	85	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGGTCCCAGCTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	156620566	156623166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_156620649_156622401_156622568_156622909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015484	chr2	+	260	2	NNC	ENSMUSG00000067818.7	novel	1128	4	NA	NA	2072	27	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCATCCCAGTCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	156622508	156623108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_156622570_156622909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015485	chr2	+	173	1	ISM	ENSMUSG00000067818.7	ENSMUST00000088552.7	1128	4	5570	496	2473	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCTTAGCTGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	156622909	156623082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156622900_156623100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015486	chr2	+	296	1	Genic_Genomic	ENSMUSG00000067818.7	novel	NA	NA	NA	NA	2847	1	mono-exon	FALSE	NA	NA	NA	NA	NA	507	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTCTATGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	156623283	156623579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_156623300_156623600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015487	chr2	+	2231	3	FSM	ENSMUSG00000062175.14	ENST00000373874.6	1401	3	-3	-827	-3	-597	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCAGAGACCACTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	156681907	156696893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_156682068_156686075_156686302_156695048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015488	chr2	+	2037	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	58	805	-35	619	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGTTTACTTTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	156681984	156696685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_156682159_156686075_156686302_156695048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015489	chr2	-	542	1	Genic_Genomic	ENSMUSG00000085741.9	novel	NA	NA	NA	NA	18003	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTAGCTTCTCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	156686811	156686269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_156686300_156686800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015490	chr2	+	1967	1	ISM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	13597	0	13504	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	156695523	156697490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156695500_156697500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015491	chr2	+	246	1	FSM	ENSMUSG00002075925.1	ENSMUST00020182138.1	246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCTCAAGTACTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	156702224	156702470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_156702200_156702500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015492	chr2	+	915	3	FSM	ENSMUSG00000027637.4	ENST00000342422.3	832	3	-81	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGCATGCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	156705047	156715483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_156705338_156707176_156707281_156714962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015493	chr2	+	423	3	ISM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	105	1092	24	-1090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTGGTAGTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	156705152	156714391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156705338_156707176_156707281_156714257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015494	chr2	+	539	3	ISM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	2127	218	2046	-216	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGAGCTGCTGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	156707174	156715265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_156707281_156714257_156714388_156714962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015495	chr2	+	523	1	Genic_Genomic	ENSMUSG00000027637.4	novel	NA	NA	NA	NA	9833	1	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGCATGCCTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	156714961	156715484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_156715000_156715500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015496	chr2	-	489	1	Genic_Genomic	ENSMUSG00000027639.17	novel	NA	NA	NA	NA	23925	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCTCTCGAGTTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	156939940	156939451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_156939500_156939900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015497	chr2	-	331	1	ISM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	58289	0	58289	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTACTTTTTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	156988143	156987812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_156987800_156988100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015498	chr2	-	363	2	ISM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	34497	21340	34497	-21340	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTCTCCACAGCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	157011935	157009152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_157009367_157011786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015499	chr2	+	1023	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	8	76	8	-76	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCTCGTATTCCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	157209521	157238607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_157209561_157220968_157221175_157237829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015500	chr2	+	504	3	FSM	ENSMUSG00000063019.6	ENST00000397152.7	602	3	2	96	2	-96	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAGAGGATTGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	157215777	157238046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_157215859_157220968_157221175_157237829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015501	chr2	+	866	2	NNC	ENSMUSG00000063019.6	novel	1107	3	NA	NA	5191	-189	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCCTGGGCACAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	157220966	157238494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_157221175_157237836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015502	chr2	+	856	1	Genic_Genomic	ENSMUSG00000063019.6	novel	NA	NA	NA	NA	22053	1	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTTGCTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	157237828	157238684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_157237800_157238700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015503	chr2	-	1336	1	ISM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	8640	0	8640	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	157399617	157398281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_157398300_157399600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015504	chr2	+	394	3	ISM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	29	111728	29	-111204	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGGATCAAGTTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	157579349	157621806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_157579480_157616330_157616520_157621731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015505	chr2	+	378	3	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	36932	101979	36932	-101979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGGACATGATAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	157616368	157631031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_157616520_157621731_157621839_157630911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015506	chr2	+	384	4	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	80251	54465	80251	-54465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTCTTCATGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	157659687	157678545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_157659748_157659970_157660030_157661373_157661523_157678429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015507	chr2	+	399	3	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	81944	22716	81944	-22716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGGAGAACGACAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	157661380	157710294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_157661523_157678429_157678612_157710219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015508	chr2	+	500	3	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	146676	-163	146676	163	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGCCGGGCACAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	157726112	157733173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_157726191_157726347_157726421_157732824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015509	chr2	+	395	1	Genic_Genomic	ENSMUSG00000027649.16	novel	NA	NA	NA	NA	153705	2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTCTAGTCTTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	157733141	157733536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_157733100_157733500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015510	chr2	+	1045	1	FSM	ENSMUSG00000062846.8	ENSMUST00000121302.2	477	1	-12	-556	-12	556	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	157743443	157744488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_157743400_157744500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015511	chr2	+	1523	3	ISM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	21449	1975	21371	-1975	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGGCAGAAACCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	157892089	157918152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_157892134_157900571_157900748_157916849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015512	chr2	+	1404	1	ISM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	48307	0	48005	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCCCAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	157918723	157920127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_157918700_157920100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015513	chr2	-	908	2	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	20241	0	20241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTGAACCACCACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	158042285	158037877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_158038574_158042073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015514	chr2	-	1096	2	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	3270	19861	3270	-19861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGGGGAGTCAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	158059256	158057738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_158057931_158058352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015515	chr2	-	1089	2	ISM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	13	20927	13	-20927	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCGACAGCCACAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	158062513	158058804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_158059698_158062317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015516	chr2	+	342	2	ISM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	320	6626	320	-6626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGGGTCACCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	158610332	158621931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_158610508_158621764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015517	chr2	+	390	3	ISM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	11810	1323	11810	-1323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACCATCTGGCTGACCGA	NA	NA	NA	NA	NA	NA	NA	NA	158621822	158627234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_158621933_158625052_158625178_158627079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015518	chr2	+	206	1	ISM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	18339	0	18339	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	158628351	158628557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_158628400_158628600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015519	chr2	+	577	2	ISM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	50336	-412	50336	412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTGCGTTAAGTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	158693629	158699463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_158693743_158698999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015520	chr2	-	1234	1	ISM	ENSMUSG00000035877.18	ENSMUST00000103111.9	9563	3	106154	0	15840	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTCTTGAGTCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	160608338	160607104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_160607100_160608300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015521	chr2	-	1978	2	FSM	ENSMUSG00000035877.18	ENST00000560364.5	1979	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGACAAAGCAGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	160624177	160612239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_160613546_160623505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015522	chr2	+	260	1	ISM	ENSMUSG00000027412.13	ENSMUST00000109455.9	3365	19	17632	3	17569	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTGAGAACCACGGTC	NA	NA	NA	NA	NA	NA	NA	NA	160747659	160747919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_160747700_160747900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015523	chr2	-	1059	1	ISM	ENSMUSG00000053141.17	ENSMUST00000109445.9	12082	30	1132452	5647	399086	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAGAAGCTGAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	161370615	161369556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161369600_161370600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015524	chr2	-	179	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	397305	1794	397305	-1794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCGAGGTGGTACACCT	NA	NA	NA	NA	NA	NA	NA	NA	161372396	161371350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161371490_161372356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015525	chr2	-	293	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	394145	2799	394145	-2799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATCCAGGAACCATTA	NA	NA	NA	NA	NA	NA	NA	NA	161375556	161372355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161372493_161375400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015526	chr2	-	181	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	380377	6898	380377	-6898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCTGCAGACATCGA	NA	NA	NA	NA	NA	NA	NA	NA	161389324	161376454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161376515_161389203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015527	chr2	-	199	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	375921	19694	375921	-19694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGTTCATCTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	161393780	161389250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161389336_161393666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015528	chr2	-	172	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	374000	24164	374000	-24164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATCTCAGTAGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	161395701	161393720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161393841_161395649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015529	chr2	-	179	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	368865	27831	368865	-27831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACTGTGTGCGTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	161400836	161397387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161397470_161400739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015530	chr2	-	181	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	271516	79752	271516	-79752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGTGACCCTGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	161498185	161449308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161449366_161498061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015531	chr2	-	157	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	229682	159431	229682	-159431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATCGAGCCGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	161540019	161528987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161529019_161539893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015532	chr2	-	173	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	194866	170337	194866	-170337	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTCAACACTGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	161574835	161539893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161540030_161574798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015533	chr2	-	173	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	26257	284404	26257	-284404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGTCTGTACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	161743444	161653960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161654057_161743367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015534	chr2	-	170	2	ISM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	176	373875	176	-373875	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGATCTACATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	161769525	161743431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_161743478_161769401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015535	chr2	+	3524	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	162773450	162779041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015536	chr2	+	369	3	ISM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	24	22704	24	-21913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAGTATTCATACAGA	NA	NA	NA	NA	NA	NA	NA	NA	162859297	162865357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162859454_162864294_162864420_162865269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015537	chr2	+	220	2	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	5848	19890	5848	-19890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTATCGTCTTACTACA	NA	NA	NA	NA	NA	NA	NA	NA	162865267	162867380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162865358_162867250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015538	chr2	+	279	3	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	10542	14079	10542	-14079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTTTTCTCTTTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	162869961	162873191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162870023_162871654_162871782_162873100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015539	chr2	+	240	3	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	12281	12047	12281	-12047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAGACTGCATCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	162871700	162875223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162871782_162873100_162873191_162875154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015540	chr2	+	265	3	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	13731	8636	13731	-8636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTACTCAGGCTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	162873150	162878634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162873191_162875154_162875224_162878478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015541	chr2	+	265	3	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	15736	4682	15736	-4682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCCAACCTCAGTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	162875155	162882588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162875224_162878478_162878634_162882546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015542	chr2	+	259	3	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	19134	2569	19134	-2569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGATCACCAACAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	162878553	162884701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162878634_162882546_162882635_162884610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015543	chr2	+	417	3	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	23127	-72	23127	72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTGTCTGTCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	162882546	162887342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162882635_162884610_162884720_162887122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015544	chr2	+	233	1	Genic_Genomic	ENSMUSG00000017858.13	novel	NA	NA	NA	NA	28410	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTCATTGATATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	162887829	162888062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_162887800_162888100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015545	chr2	+	824	3	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	17958	7876	17934	-7876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAAGACACCCCTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	162914540	162917662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162914835_162916301_162916725_162917555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015546	chr2	+	736	4	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	19763	3910	19739	-3910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGCTGTGGGCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	162916345	162921628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162916725_162917555_162917700_162919711_162919810_162921513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015547	chr2	+	847	3	ISM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	26054	-138	26030	138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTGAGTATCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	162922636	162925676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162922743_162924469_162924620_162925085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015548	chr2	+	609	1	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	29393	0	29393	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGACTCCTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	162925999	162926608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_162926000_162926600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015549	chr2	+	293	3	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	91	46950	91	-46950	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCATGGTGTCCAACATG	NA	NA	NA	NA	NA	NA	NA	NA	163067464	163118072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163067508_163089686_163089753_163117888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015550	chr2	+	352	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	50563	8627	50563	-8627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCATCACCTCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	163117936	163156395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163118135_163156241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015551	chr2	+	431	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	88883	7102	88883	-7102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGGAGAAGAGCAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	163156256	163157920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163156482_163157714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015552	chr2	+	410	2	ISM	ENSMUSG00000074607.12	ENST00000358131.5	2243	8	90537	2876	90352	-2612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGCACATCGCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	163157725	163162410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163157943_163162217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015553	chr2	+	314	2	ISM	ENSMUSG00000074607.12	ENSMUST00000165937.8	1675	9	95034	1571	95034	-1571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCGGCACCTGCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	163162407	163163451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163162611_163163340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015554	chr2	+	302	2	ISM	ENSMUSG00000074607.12	ENSMUST00000099110.10	2166	9	96055	388	95964	-188	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTCTCTCCCTCGACC	NA	NA	NA	NA	NA	NA	NA	NA	163163337	163164834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163163469_163164663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015555	chr2	+	235	1	ISM	ENSMUSG00000074607.12	ENSMUST00000109428.9	2947	9	120011	800	97682	4	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCAAGGTGATTCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	163165055	163165290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163165100_163165300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015556	chr2	-	1479	2	FSM	ENSMUSG00000017817.12	ENST00000342272.3	1483	2	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGAGGGCTGTCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	163239798	163228806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_163229555_163239067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015557	chr2	+	1307	2	Antisense	novelGene_ENSMUSG00000017817.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACCGAAGAGACTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	163228858	163239686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_163229561_163239081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015558	chr2	-	573	1	Genic_Genomic	ENSMUSG00000035399.13	novel	NA	NA	NA	NA	13136	2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTGTTGTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	163248312	163247739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_163247700_163248300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015559	chr2	-	809	3	ISM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	3871	696	3871	-665	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCGTGTCTATGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	163257577	163248437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_163249010_163253316_163253431_163257454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015560	chr2	+	455	1	FSM	ENSMUSG00000099632.2	ENSMUST00000190930.2	567	1	112	0	112	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCAGTCTCTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	163261826	163262281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_163261800_163262300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015561	chr2	+	1664	4	FSM	ENSMUSG00000017943.16	ENST00000612599.4	2105	4	42	399	34	-309	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCAAAAGCCATGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	163280431	163296586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_163280646_163287953_163288147_163289418_163289593_163295503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015562	chr2	+	1585	2	ISM	ENSMUSG00000017943.16	ENST00000537864.5	2365	6	13033	10	13025	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCAAGCTCACCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	163293422	163296975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163293536_163295503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015563	chr2	+	1484	1	NIC	ENSMUSG00000017943.16	novel	2365	6	NA	NA	15104	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGGCAAGGCGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	163295501	163296985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_163295500_163297000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015564	chr2	+	402	4	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	4393	13922	4393	-10026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGACATTCGGGCAAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	163393500	163400903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163393672_163394479_163394575_163400104_163400212_163400874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015565	chr2	+	412	4	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	11021	8667	11021	-4771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTCCAAGAGCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	163400128	163406158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163400212_163400874_163401031_163404438_163404527_163406073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015566	chr2	+	547	3	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	16964	3867	16964	-1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCAGCCTGGGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	163406071	163410958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163406230_163408040_163408278_163410806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015567	chr2	+	367	2	NNC	ENSMUSG00000017950.17	novel	1187	9	NA	NA	18930	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCCCCGACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	163408037	163410929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_163408282_163410806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015568	chr2	+	1105	1	Genic_Genomic	ENSMUSG00000017679.17	novel	NA	NA	NA	NA	15587	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGTGGTTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	163459828	163460933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_163459800_163460900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015569	chr2	-	1069	1	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	20791	0	20791	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGATACCTTAGATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	163466260	163465191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_163465200_163466300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015570	chr2	-	1314	3	ISM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	17139	1340	17139	-1340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCTTGGAATGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	163469912	163466531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_163467500_163468172_163468398_163469791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015571	chr2	+	543	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	8	432	-5	38	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATGAGATGTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	163500313	163567646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_163500413_163563047_163563222_163567376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015572	chr2	+	336	3	ISM	ENSMUSG00000035268.15	ENSMUST00000109400.3	1059	4	13	4865	13	-4401	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGGGAGCAGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	163535970	163563207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163536077_163545405_163545476_163563047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015573	chr2	+	305	1	Genic_Genomic	ENSMUSG00000035268.15	novel	NA	NA	NA	NA	31817	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCTTTTCTTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	163567774	163568079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_163567800_163568100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015574	chr2	-	800	7	FSM	ENSMUSG00000017697.4	ENST00000537820.1	800	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGACTGGTGAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	163577393	163570046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_163570167_163571931_163571997_163572217_163572320_163573024_163573153_163574176_163574293_163574773_163574918_163577268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015575	chr2	+	1056	3	FSM	ENSMUSG00000035238.5	ENST00000372861.5	1126	3	4	66	4	-66	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTAAGGCTCTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	163695726	163702088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_163696010_163700102_163700461_163701673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015576	chr2	-	550	2	NNC	ENSMUSG00000035226.6	novel	4962	6	NA	NA	58703	1532	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGAGTCCGTGCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	163701900	163700138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_163700459_163701670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015577	chr2	+	453	1	Genic_Genomic	ENSMUSG00000035238.5	novel	NA	NA	NA	NA	5980	1	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGCAACAGCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	163701702	163702155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_163701700_163702200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015578	chr2	+	336	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	248	6809	248	-6809	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCGTGTCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	163837127	163853699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163837286_163853521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015579	chr2	+	289	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	16780	4459	16780	-4459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAACATTTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	163853659	163856049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163853825_163855925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015580	chr2	+	264	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	19045	3219	19045	-3219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCCTGCAGCCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	163855924	163857289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163856050_163857150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015581	chr2	+	260	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	20271	2390	20271	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGACAGCTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	163857150	163858118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163857315_163858022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015582	chr2	+	250	2	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	21142	1767	21142	-1767	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGATTTTTCACAGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	163858021	163858741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163858119_163858588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015583	chr2	+	196	1	ISM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	23433	0	23433	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	163860312	163860508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163860300_163860500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015584	chr2	+	464	3	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	8	18310	8	-18310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCCTGGGCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	163867439	163873234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163867594_163869394_163869593_163873122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015585	chr2	+	351	3	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	2016	17351	2016	-17351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAACGTGGACGAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	163869447	163874193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163869593_163873122_163873235_163874099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015586	chr2	+	351	3	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	5685	17044	5685	-17044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGGTGTCTCCATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	163873116	163874500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163873235_163874099_163874240_163874407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015587	chr2	+	394	4	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	6668	12493	6668	-12493	internal_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGGACGACTCCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	163874099	163879051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163874240_163874407_163874503_163877164_163877303_163879030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015588	chr2	+	553	4	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	7001	7059	7001	-7059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGTGTGTCTACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	163874432	163884485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163874503_163877164_163877303_163879030_163879127_163884236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015589	chr2	+	411	3	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	11624	5984	11624	-5984	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGACCCAGCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	163879055	163885560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163879127_163884236_163884486_163885469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015590	chr2	+	357	3	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	16899	5250	16899	-5250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAGGTGAGTGTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	163884330	163886294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163884486_163885469_163885561_163886183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015591	chr2	+	449	4	ISM	ENSMUSG00000054582.5	ENST00000217073.7	1730	13	18752	0	18752	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGGAGACTGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	163886183	163891544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163886301_163887782_163887890_163889400_163889495_163891413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015592	chr2	-	579	1	ISM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	16984	0	16984	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	163896038	163895459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_163895500_163896000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015593	chr2	-	1487	5	ISM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	6137	0	6137	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	163906885	163895459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015594	chr2	+	492	4	ISM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	9550	55340	9550	-55340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGATGCAGAGAGCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	163925635	163938827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163925679_163928414_163928530_163930760_163930926_163938658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015595	chr2	+	472	3	ISM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	14674	53671	14674	-53671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACACCGCCGCGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	163930759	163940496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163930926_163938658_163938827_163940358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015596	chr2	+	492	1	ISM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	77618	3277	41555	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCAAACACTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	163993675	163994167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_163993700_163994200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015597	chr2	-	1300	2	ISM	ENSMUSG00000040164.4	ENST00000537075.3	1769	3	2579	-1	2486	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCCACAGCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	164010547	164006451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164006936_164009731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015598	chr2	-	1065	2	ISM	ENSMUSG00000040164.4	ENST00000537075.3	1769	3	8	3492	8	-3492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCGCTCAACCTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	164013118	164009944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164010812_164012920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015599	chr2	-	246	1	FSM	ENSMUSG00000098489.3	ENSMUST00000185076.3	71	1	68	-243	68	243	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGTGACTCTGATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	164196235	164195989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_164196000_164196200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015600	chr2	-	379	3	ISM	ENSMUSG00000017002.15	ENSMUST00000109367.10	876	4	243	816	-197	-724	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATGTGAGGTAAGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	164198184	164196805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164196946_164197370_164197533_164198107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015601	chr2	-	2460	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCAGTTTTATTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	164285107	164266165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015602	chr2	+	467	2	ISM	ENSMUSG00000045503.17	ENSMUST00000109352.8	2001	6	993	4412	993	-4408	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCGAGCCGGTCGCGG	NA	NA	NA	NA	NA	NA	NA	NA	164299888	164303020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164300018_164302682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015603	chr2	+	1704	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	-96	-2	-96	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCTTGTACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	164302794	164307430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015604	chr2	+	325	1	ISM	ENSMUSG00000045503.17	ENSMUST00000109352.8	2001	6	8212	0	4217	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCTTGTACTTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	164307107	164307432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164307100_164307400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015605	chr2	+	986	4	FSM	ENSMUSG00000017734.16	ENSMUST00000109350.9	1055	4	69	0	69	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCTCATTCTTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	164328094	164332687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_164328164_164330161_164330309_164330487_164330626_164332055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015606	chr2	+	559	2	ISM	ENSMUSG00000017734.16	ENST00000372720.7	1239	4	12	2277	12	-2277	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTCAATTTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	164328204	164330308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164328488_164330032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015607	chr2	+	435	3	ISM	ENSMUSG00000017734.16	ENSMUST00000069385.15	1658	4	0	2653	0	-2043	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTTATTGATCTTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	164328374	164330542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164328608_164330161_164330309_164330487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015608	chr2	+	1345	4	FSM	ENSMUSG00000017734.16	ENST00000372712.6	1344	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGATGTTCTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	164329051	164332585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_164329582_164330161_164330309_164330487_164330626_164332055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015609	chr2	+	1047	3	FSM	ENSMUSG00000017734.16	ENST00000372722.7	914	3	-131	-2	-131	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTTCTGAGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	164330032	164332587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_164330309_164330487_164330727_164332055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015610	chr2	+	591	1	ISM	ENSMUSG00000017734.16	ENSMUST00000109350.9	1055	4	4071	0	1933	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCTCATTCTTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	164332096	164332687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164332100_164332700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015611	chr2	+	209	1	ISM	ENSMUSG00000017734.16	ENSMUST00000109349.9	3597	4	4211	2023	2844	21	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGAAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	164333007	164333216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164333000_164333200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015612	chr2	+	967	6	ISM	ENSMUSG00000017721.16	ENST00000545755.3	1079	7	3630	-2	3630	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGCCCGTGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	164343194	164349447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015613	chr2	+	204	1	ISM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	22421	0	22390	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGTTTTTGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	164610323	164610527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164610300_164610500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015614	chr2	+	830	5	NNC	ENSMUSG00000001403.14	novel	967	6	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	164611956	164614827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_164612005_164613186_164613300_164613773_164613979_164614086_164614147_164614423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015615	chr2	-	175	1	Genic_Genomic	ENSMUSG00000017300.10	novel	NA	NA	NA	NA	2407	1	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTGACCGACTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	164619254	164619079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_164619100_164619300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015616	chr2	-	285	2	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	2131	27	2131	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAATAAAAGTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	164619530	164619107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164619254_164619391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015617	chr2	-	402	3	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	1648	311	1648	-311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGCCAGCTGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	164620013	164619391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164619529_164619650_164619766_164619863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015618	chr2	-	227	3	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	1512	656	1512	-656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCATGATGGTGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	164620149	164619736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164619766_164619863_164620008_164620095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015619	chr2	-	198	3	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	19	841	19	-841	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGACACCCACCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	164621642	164619921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164620008_164620095_164620148_164621582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015620	chr2	+	1288	2	NNC	ENSMUSG00000050373.14	novel	1243	2	NA	NA	-1	40	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATGTATCTCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	164627935	164629592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_164628249_164628617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015621	chr2	+	1247	3	NNC	ENSMUSG00000050373.14	novel	2590	3	NA	NA	16	18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGGAACTTTATTATGC	NA	NA	NA	NA	NA	NA	NA	NA	164627952	164634425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_164628249_164628617_164628776_164633632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015622	chr2	+	208	2	ISM	ENSMUSG00000050373.14	ENSMUST00000172577.8	1825	3	710	1280	684	-715	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCGATACTCGGACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	164628620	164633692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164628769_164633632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015623	chr2	+	980	1	Genic_Genomic	ENSMUSG00000050373.14	novel	NA	NA	NA	NA	6815	1	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGGAGTCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	164634751	164635731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_164634800_164635700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015624	chr2	+	1591	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	9	1108	9	-1108	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAGCACAGTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	164647026	164662942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_164647352_164661676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015625	chr2	+	1296	1	ISM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	15737	0	15737	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGTTTTTTGAGACG	NA	NA	NA	NA	NA	NA	NA	NA	164662754	164664050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164662800_164664000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015626	chr2	+	1971	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	82	652	82	-652	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACTGAACCCAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	164664687	164668139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_164665121_164666601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015627	chr2	+	1612	1	ISM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	2574	0	2574	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTCTTGTCTGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	164667179	164668791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164667200_164668800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015628	chr2	+	710	4	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	4	6601	4	-5113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGACCACTATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	164674824	164676351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164675117_164675643_164675771_164675949_164676129_164676239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015629	chr2	+	377	4	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	28	4620	28	-4620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGTTGCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	164676001	164676844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015630	chr2	+	408	4	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	265	4232	265	-4232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGGCAGCTACCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	164676238	164677232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164676352_164676617_164676669_164676757_164676845_164677075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015631	chr2	+	402	4	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	778	3057	778	-3057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACCCAGAGTGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	164676751	164678407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164676845_164677075_164677232_164677549_164677642_164678346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015632	chr2	+	350	4	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	1119	2525	1119	-2525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCAACATCTACAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	164677092	164678939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164677232_164677549_164677642_164678346_164678432_164678905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015633	chr2	+	350	4	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	2380	2088	2380	-2088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACATCCCCGAGTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	164678353	164679376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164678432_164678905_164679002_164679101_164679178_164679276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015634	chr2	+	645	7	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	3574	1069	2393	-594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGACTTTGTGCCTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	164678366	164680870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015635	chr2	+	969	5	ISM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	3126	-176	3126	139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGGGGGGACATGGG	NA	NA	NA	NA	NA	NA	NA	NA	164679099	164681640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164679178_164679276_164679417_164679996_164680073_164680764_164680870_164681070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015636	chr2	+	895	6	ISM	ENSMUSG00000017760.17	ENST00000372459.7	1752	14	3179	-28	3179	28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTAACACTGTAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	164679152	164681529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015637	chr2	+	370	1	ISM	ENSMUSG00000017760.17	ENSMUST00000103093.10	2534	15	6342	435	5161	3	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	164681134	164681504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164681100_164681500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015638	chr2	-	451	3	ISM	ENSMUSG00000017754.14	ENST00000420868.2	1244	13	16608	-146	16608	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	164682303	164681437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164681749_164682033_164682111_164682240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015639	chr2	+	601	1	Genic_Genomic	ENSMUSG00000017760.17	novel	NA	NA	NA	NA	6382	4	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGTGTGGTGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	164682355	164682956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_164682400_164683000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015640	chr2	+	277	2	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	3417	10272	3417	-10272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAGCCAGTTCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	164724693	164726102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164724865_164725996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015641	chr2	+	286	2	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	6317	8391	6317	-8391	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGCTCTGCAGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	164727593	164727983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164727724_164727827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015642	chr2	+	317	3	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	6603	7665	6603	-7665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCTCATTGAGTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	164727879	164728709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164727983_164728414_164728563_164728643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015643	chr2	+	307	3	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	10088	3946	10088	-3946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGTGCTGCCAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	164731364	164732428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164731393_164731473_164731659_164732334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015644	chr2	+	417	2	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	11243	3336	11243	-3336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTGCGGGGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	164732519	164733038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164732695_164732796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015645	chr2	+	291	1	ISM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	14807	0	14807	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	164736083	164736374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_164736100_164736400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015646	chr2	-	377	1	ISM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	34134	0	34055	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAATCTTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	164842653	164842276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164842300_164842700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015647	chr2	-	800	2	ISM	ENSMUSG00000039804.16	ENSMUST00000122070.2	3117	8	32087	1095	32087	-1095	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCACTCCTTCCTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	164844621	164843377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_164844092_164844535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015648	chr2	+	1377	1	Genic_Genomic	ENSMUSG00000017652.17	novel	NA	NA	NA	NA	15893	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGAAGATTCATATAAT	NA	NA	NA	NA	NA	NA	NA	NA	164913492	164914869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_164913500_164914900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015649	chr2	-	404	1	Genic_Genomic	ENSMUSG00000017664.17	novel	NA	NA	NA	NA	10799	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTCTGGAGACTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	165118876	165118472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_165118500_165118900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015650	chr2	-	562	3	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	9376	427	9376	-427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCGAATGCCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	165120299	165118900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165119194_165119371_165119502_165120160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015651	chr2	-	193	2	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	6863	4061	6863	-4061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCGGTCTTCTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	165122812	165122534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165122621_165122705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015652	chr2	-	178	2	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	4861	5525	4861	-5525	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTGACCACACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	165124814	165123998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165124065_165124702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015653	chr2	-	434	2	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	4182	6271	4182	-6271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGCTGGACGGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	165125493	165124744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165124854_165125168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015654	chr2	-	423	2	ISM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	7	6706	7	-6706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTGACAAAGGTAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	165129782	165125179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165125524_165129703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015655	chr2	-	874	1	ISM	ENSMUSG00000017670.17	ENSMUST00000103091.9	4695	21	30798	1124	26288	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	165131948	165131074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165131100_165131900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015656	chr2	-	898	2	ISM	ENSMUSG00000017670.17	ENST00000352077.6	2157	20	24132	-617	24132	-589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGCTCTCTTAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	165134104	165131663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165132482_165134024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015657	chr2	-	517	1	ISM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	2698	0	2698	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCGGAGACCTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	165332546	165332029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165332000_165332500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015658	chr2	-	657	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	37	1186	37	-1186	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGCTGAAGAAGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	165335207	165333215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_165333632_165334966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015659	chr2	-	1135	4	ISM	ENSMUSG00000039671.19	ENSMUST00000109266.11	5072	22	29482	28356	29482	14674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTGAAAGGAAAGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	165670611	165654427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165654779_165657236_165657390_165662461_165662609_165670127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015660	chr2	-	241	1	ISM	ENSMUSG00000039671.19	ENSMUST00000109262.8	2515	11	69528	0	30751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGCTCTCTTGTTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	165669342	165669101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165669100_165669300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015661	chr2	-	292	3	ISM	ENSMUSG00000039671.19	ENSMUST00000109262.8	2515	11	54071	11635	15294	-11635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGTGAGTGGCCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	165684799	165680736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165680820_165681917_165682011_165684683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015662	chr2	-	299	3	ISM	ENSMUSG00000039671.19	ENSMUST00000109262.8	2515	11	50806	12848	12029	-12848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCCCATGGACCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	165688064	165681949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_165682011_165684683_165684798_165687940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015663	chr2	+	1065	3	ISM	ENSMUSG00000002718.15	ENSMUST00000168599.8	2748	23	27880	-596	27880	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTTTTTATTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	166784979	166788309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166785127_166786296_166786529_166787623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015664	chr2	-	309	1	ISM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	48421	0	48246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTATTTTCCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	166789777	166789468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_166789500_166789800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015665	chr2	-	347	2	ISM	ENSMUSG00000039536.17	ENSMUST00000109236.9	2860	12	46471	825	46275	-825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAAAGAGAGCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	166791748	166791017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_166791280_166791663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015666	chr2	-	322	2	ISM	ENSMUSG00000039536.17	ENSMUST00000049412.12	2840	12	45038	2170	45038	-2044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTATCTCTCATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	166792985	166792236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_166792274_166792700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015667	chr2	-	443	3	ISM	ENSMUSG00000039536.17	ENSMUST00000049412.12	2840	12	43662	2703	43662	-2577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCCCATGGACCTCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	166794361	166792769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_166793021_166793190_166793267_166794245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015668	chr2	-	259	2	ISM	ENSMUSG00000039536.17	ENSMUST00000049412.12	2840	12	42750	4213	42750	-4087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGCCAAGCCAGCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	166795273	166794279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_166794393_166795127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015669	chr2	-	352	3	ISM	ENSMUSG00000039536.17	ENSMUST00000049412.12	2840	12	35980	5167	35980	-5041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGTAGACTTGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	166802043	166795233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_166795272_166796819_166797033_166801942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015670	chr2	-	382	3	ISM	ENSMUSG00000039536.17	ENSMUST00000049412.12	2840	12	31383	11901	31383	-11775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAATTTGCCTGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	166806640	166801967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_166802042_166805348_166805515_166806498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015671	chr2	-	435	3	ISM	ENSMUSG00000039536.17	ENSMUST00000109236.9	2860	12	58	15234	24	-15234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCACCCGTGAAACACGA	NA	NA	NA	NA	NA	NA	NA	NA	166838161	166805426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_166805515_166806498_166806638_166837953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015672	chr2	+	248	2	ISM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	-19	7959	-19	-7959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGATGTCATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	166857210	166859774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166857347_166859662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015673	chr2	+	137	2	ISM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	2504	6126	2504	-6126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTGAGACCCGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	166859733	166861607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166859810_166861546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015674	chr2	+	209	2	ISM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	4567	5268	4567	-5268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGGGTCTGAGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	166861796	166862465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166861960_166862419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015675	chr2	+	134	2	ISM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	5188	5098	5188	-5098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGCTTTGGCAACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	166862417	166862635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166862464_166862547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015676	chr2	+	197	2	ISM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	5315	3659	5315	-3659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGGTAGGGGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	166862544	166864074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166862635_166863967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015677	chr2	+	243	2	ISM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	6736	1295	6736	-1295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCAGTTCTGCAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	166863965	166866438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166864074_166866303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015678	chr2	+	228	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	9244	8721	9127	413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTGAGCAGCATTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	166866356	166868146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166866478_166868039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015679	chr2	+	144	2	NNC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	9173	379	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATCGACCACCTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	166866402	166868112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_166866474_166868039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015680	chr2	+	254	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	10927	7176	10810	1958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGCCTCGTTGCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	166868039	166869691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166868191_166869588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015681	chr2	+	216	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	12473	6966	12356	2168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGGACCGGGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	166869585	166869901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166869689_166869788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015682	chr2	+	242	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	12674	6572	12557	2562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGGCGAGCTCCACGG	NA	NA	NA	NA	NA	NA	NA	NA	166869786	166870295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166869931_166870197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015683	chr2	+	190	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	13135	5582	13018	3552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTATTGATTTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	166870247	166871285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166870352_166871199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015684	chr2	+	192	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	14086	5354	13969	3780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGATGCTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	166871198	166871513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166871282_166871404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015685	chr2	+	212	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	14355	3516	14238	-3516	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCCCAGGTGAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	166871467	166873351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166871583_166873254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015686	chr2	+	211	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	16141	3294	16024	-3294	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTGGAAGGCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	166873253	166873573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166873362_166873470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015687	chr2	+	202	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	16355	1289	16238	-1289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCCTCCCTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	166873467	166875578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166873574_166875482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015688	chr2	+	197	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	18376	1106	18259	-1106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGGCCCTGGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	166875488	166875761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166875578_166875653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015689	chr2	+	187	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	18563	824	18446	-824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTTAAAGTGCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	166875675	166876043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166875775_166875955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015690	chr2	+	163	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	18842	401	18725	-401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGCACTGTAGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	166875954	166876466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166876044_166876392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015691	chr2	+	204	2	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	19279	178	19162	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGCTCAGACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	166876391	166876689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166876465_166876558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015692	chr2	+	138	1	ISM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	19617	0	19500	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGTTGTCTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	166876729	166876867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_166876700_166876900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015693	chr2	+	735	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	166904856	166907782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015694	chr2	-	938	1	ISM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	49802	0	49802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTAGTCGTCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	167141301	167140363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167140400_167141300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015695	chr2	+	969	1	ISM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	54320	0	54311	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	167317951	167318920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_167318000_167318900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015696	chr2	+	1143	2	ISM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	9497	404	9497	-397	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGGCTTGGGAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	167354505	167357689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_167354545_167356585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015697	chr2	+	1482	1	ISM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	11603	0	11603	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAATGTTTTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	167356611	167358093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_167356600_167358100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015698	chr2	+	535	2	ISM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	40	3746	40	-3746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTACCTCAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	167380154	167380988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_167380292_167380590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015699	chr2	+	686	2	ISM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	661	573	661	-573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGCCTTTGTACCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	167380775	167384161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_167381119_167383818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015700	chr2	+	400	1	Genic_Genomic	ENSMUSG00000042821.8	novel	NA	NA	NA	NA	4221	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTGTTGGGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	167384335	167384735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_167384300_167384700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015701	chr2	-	2044	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGGCTGTGCCCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	167474017	167449556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015702	chr2	-	2025	4	NNC	ENSMUSG00000078923.11	novel	2041	4	NA	NA	14	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGGCTGTGCCCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	167474001	167449556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_167451168_167452226_167452350_167459748_167459898_167473859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015703	chr2	-	1992	4	NNC	ENSMUSG00000078923.11	novel	2041	4	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGGCTGTGCCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	167473969	167449557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_167451168_167452223_167452350_167459748_167459895_167473859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015704	chr2	-	1287	1	ISM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	22960	211	22837	1	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTCGGTGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	167451055	167449768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167449800_167451100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015705	chr2	-	1295	3	ISM	ENSMUSG00000078923.11	ENSMUST00000151365.8	924	5	13937	-465	13922	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGAGCTTTGTGCTCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	167459970	167450220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167451168_167452223_167452350_167459748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015706	chr2	-	777	2	ISM	ENSMUSG00000078923.11	ENSMUST00000060645.13	1586	3	13994	777	13994	145	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCCCCATCCAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	167459898	167450540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167451168_167459748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015707	chr2	-	131	1	ISM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	18234	584	18234	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGAGGGAGCTAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	167485242	167485111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167485100_167485200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015708	chr2	-	147	2	ISM	ENSMUSG00000090213.2	ENST00000371650.9	1762	6	16725	938	16699	-938	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCCAAGGCCTGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	167486777	167486049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167486103_167486683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015709	chr2	-	247	2	ISM	ENSMUSG00000090213.2	ENST00000371650.9	1762	6	15443	1646	15417	-1646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGATCCTACCACGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	167488059	167486757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167486897_167487951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015710	chr2	-	175	2	ISM	ENSMUSG00000090213.2	ENST00000371650.9	1762	6	14522	2894	14496	-2894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCTGCTGCCACTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	167488980	167488005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167488097_167488896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015711	chr2	-	183	2	ISM	ENSMUSG00000090213.2	ENST00000371650.9	1762	6	6855	3805	6829	-3805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGGACCTGCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	167496647	167488916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167488980_167496527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015712	chr2	-	240	2	ISM	ENSMUSG00000090213.2	ENST00000371650.9	1762	6	76	11430	50	-11430	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGGGTGTCGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	167503426	167496541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_167496648_167503292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015713	chr2	+	1373	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	131	0	131	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGGCAGTAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	167530965	167532338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_167531000_167532300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015714	chr2	+	2156	4	ISM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	10506	1326	10506	-1326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGTTGAGGCATGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	167816051	167819979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_167816190_167816648_167816811_167817228_167817450_167818344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015715	chr2	+	1649	1	Genic_Genomic	ENSMUSG00000027540.14	novel	NA	NA	NA	NA	14113	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGATGTGCTTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	167819658	167821307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_167819700_167821300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015716	chr2	-	622	1	ISM	ENSMUSG00000051149.16	ENSMUST00000057793.11	4917	5	25315	0	25315	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	NA	NA	NA	NA	NA	NA	NA	NA	168023527	168022905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168022900_168023500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015717	chr2	+	1277	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	694	2	694	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGAGTCTTAATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	168073235	168074512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_168073200_168074500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015718	chr2	-	375	3	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	85664	0	85510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAAACAAACATAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	168346601	168322117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168322170_168328605_168328692_168346364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015719	chr2	-	415	3	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	82972	24708	82818	13297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGAGCCTGAGTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	168349293	168346825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168347055_168348787_168348915_168349234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015720	chr2	-	324	3	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	66967	26670	66813	11335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACATTCTCCCCCATA	NA	NA	NA	NA	NA	NA	NA	NA	168365298	168348787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168348915_168349234_168349291_168365157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015721	chr2	-	372	3	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	55253	27117	55099	10888	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCACCAGAGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	168377012	168349234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168349291_168365157_168365299_168376837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015722	chr2	-	439	3	ISM	ENSMUSG00000027544.17	ENSMUST00000029057.13	2310	7	53783	4221	53783	-4221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACGGGGGCCAGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	168378328	168365238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168365299_168376837_168377011_168378122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015723	chr2	-	379	2	ISM	ENSMUSG00000027544.17	ENSMUST00000029057.13	2310	7	22878	17104	22878	-17104	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTGGGCAGTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	168409233	168378121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168378326_168409058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015724	chr2	-	429	2	ISM	ENSMUSG00000027544.17	ENSMUST00000029057.13	2310	7	19337	48041	19337	-48041	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGACTCAAATTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	168412774	168409058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168409231_168412517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015725	chr2	+	243	2	Antisense	novelGene_ENSMUSG00000027544.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACGGAGCGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	168409128	168412662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_168409233_168412523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015726	chr2	-	465	2	ISM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	38	90697	38	-51797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATCCCCGCTGGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	168432227	168412814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168413034_168431981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015727	chr2	-	2968	3	FSM	ENSMUSG00000027547.18	ENST00000423288.1	2990	3	22	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAGCTAAGGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	168598623	168591959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_168592381_168594373_168594651_168596353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015728	chr2	-	1516	3	FSM	ENSMUSG00000027547.18	ENST00000429385.1	1514	3	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGAGCAATGGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	168598627	168592105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_168592381_168594373_168594661_168597673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015729	chr2	-	1051	2	NNC	ENSMUSG00000027547.18	novel	1514	3	NA	NA	21	-2433	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGCAGCCACGCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	168598604	168594538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_168594661_168597675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015730	chr2	-	773	1	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	29139	0	29139	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATTGTATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	168768053	168767280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168767300_168768100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015731	chr2	-	787	2	ISM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	19946	902	19946	-902	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGTCCCCCTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	168777246	168768182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168768854_168777130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015732	chr2	-	699	5	ISM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	3650	0	3633	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTTGTTACCATT	NA	NA	NA	NA	NA	NA	NA	NA	168793559	168776732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015733	chr2	+	965	2	FSM	ENSMUSG00000047907.12	ENST00000603338.2	3443	2	2478	0	2478	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGTCGCAGTCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	169727920	169912566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_169728507_169912187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015734	chr2	+	1006	1	FSM	ENSMUSG00000084013.2	ENSMUST00000118388.2	846	1	29	-189	29	189	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCTGGGTGGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	170126983	170127989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_170127000_170128000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015735	chr2	-	284	1	FSM	ENSMUSG00000084067.4	ENSMUST00000120455.2	306	1	9	13	9	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGACGGTTTAGATAATTC	NA	NA	NA	NA	NA	NA	NA	NA	170305730	170305446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_170305400_170305700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015736	chr2	+	915	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGTATCCGACAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	170353174	170361043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015737	chr2	+	453	1	NIC	ENSMUSG00000052033.14	novel	935	4	NA	NA	7151	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGTATCCGACAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	170360590	170361043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_170360600_170361000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015738	chr2	+	1897	2	ISM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	5915	1412	5915	-1412	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGCTCCAGGGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	172193399	172196257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_172193545_172194505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015739	chr2	+	1852	1	Genic_Genomic	ENSMUSG00000027495.5	novel	NA	NA	NA	NA	8334	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCTGCCGTCTGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	172195818	172197670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_172195800_172197700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015740	chr2	-	288	1	ISM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	14058	0	14029	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTGGGTAATCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	172198397	172198109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_172198100_172198400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015741	chr2	-	585	3	ISM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	10598	530	10598	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCCCTCAGGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	172201828	172198645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_172198902_172199000_172199176_172201674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015742	chr2	-	342	3	ISM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	7592	1007	7592	-1007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGGATGCATGACGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	172204834	172199122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_172199176_172201674_172201824_172204694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015743	chr2	-	436	3	ISM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	6717	3603	6717	-3603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCAGACTTCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	172205709	172201718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_172201824_172204694_172204834_172205517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015744	chr2	-	311	3	ISM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	6004	6660	6004	-6660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGAATATGCGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	172206422	172204775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_172204834_172205517_172205710_172206361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015745	chr2	-	463	3	ISM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	3349	7422	3349	-7422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATCCAGTCGCACCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	172209077	172205537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_172205710_172206361_172206417_172208841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015746	chr2	-	354	3	ISM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	7	10731	7	-10725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCTTGGGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	172212448	172208840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_172209092_172210905_172210953_172212392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015747	chr2	+	381	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	115	9318	115	-9318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCGTGGGTGTGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	172212768	172215050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_172212948_172214848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015748	chr2	+	468	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	2190	6549	2190	-6549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGCCAATTGAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	172214843	172217819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_172215050_172217557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015749	chr2	+	722	3	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	4941	4550	4941	-4550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCCATTTTCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	172217594	172219818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_172217836_172217971_172218170_172219535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015750	chr2	+	395	2	ISM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	7057	1910	7057	-1910	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCACCAACCCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	172219710	172222458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_172219927_172222279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015751	chr2	+	284	1	Genic_Genomic	ENSMUSG00000027498.15	novel	NA	NA	NA	NA	11432	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGACGTAAAGGTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	172224085	172224369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_172224100_172224400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015752	chr2	+	810	2	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	8467	5285	8467	-2196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGCCTGCTGCTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	172266513	172269278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_172266601_172268555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015753	chr2	+	1152	2	ISM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	11060	-2	11060	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGAGGTCCGCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	172269106	172274565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_172269846_172274152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015754	chr2	+	869	5	ISM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	9327	0	9327	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTCCAAGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	172851236	172857532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015755	chr2	+	2066	5	FSM	ENSMUSG00000027510.18	ENSMUST00000173393.8	2071	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	172862295	172876527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_172862355_172863464_172864064_172864584_172864709_172865119_172865175_172875298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015756	chr2	+	557	3	FSM	ENSMUSG00000027510.18	ENST00000440234.6	553	3	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCAGCCACCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	172863800	172875468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_172864064_172864584_172864709_172875298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015757	chr2	+	545	3	NNC	ENSMUSG00000027510.18	novel	553	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGCAGCCACCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	172863802	172875467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_172864068_172864597_172864709_172875298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015758	chr2	-	1372	1	ISM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	50704	0	50704	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCCCTTTTTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	173067622	173066250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_173066200_173067600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015759	chr2	+	647	1	ISM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	46937	0	46841	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGGCATTCATTACG	NA	NA	NA	NA	NA	NA	NA	NA	173548489	173549136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_173548500_173549100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015760	chr2	+	1512	3	FSM	ENSMUSG00000054455.6	ENST00000395802.7	1512	3	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTGTCATTTTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	173579480	173621151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_173579544_173603909_173604063_173619855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015761	chr2	+	1374	2	NNC	ENSMUSG00000054455.6	novel	1512	3	NA	NA	24497	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTTGTCATTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	173603976	173621150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_173604056_173619855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015762	chr2	+	1299	1	NIC	ENSMUSG00000054455.6	novel	7032	6	NA	NA	40373	1	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTGTCATTTTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	173619852	173621151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_173619900_173621200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015763	chr2	-	669	1	FSM	ENSMUSG00000082519.2	ENSMUST00000120334.2	655	1	-1	-13	-1	13	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATGAACGAAGGATATG	NA	NA	NA	NA	NA	NA	NA	NA	173889067	173888398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_173888400_173889100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015764	chr2	+	2416	1	ISM	ENSMUSG00000027522.16	ENSMUST00000087908.10	3865	9	20434	0	20298	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCATTCCTAGTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	173939148	173941564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_173939100_173941600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015765	chr2	+	486	4	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	9906	1480	9906	-1480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTCAGGGCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	173962047	173963383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_173962121_173962336_173962461_173962740_173962918_173963271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015766	chr2	+	656	3	ISM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	10599	612	10599	-612	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGTAAGCTCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	173962740	173964251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_173962918_173963271_173963383_173963883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015767	chr2	+	448	1	Genic_Genomic	ENSMUSG00000039263.17	novel	NA	NA	NA	NA	12277	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTGTGATTCCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	173964418	173964866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_173964400_173964900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015768	chr2	+	415	3	ISM	ENSMUSG00000027523.21	ENST00000419558.7	2514	11	867	5040	831	3619	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTATGTGTCTAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	174126979	174183496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_174127271_174176004_174176078_174183445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015769	chr2	+	2618	4	ISM	ENSMUSG00000027523.21	ENSMUST00000087871.11	3903	13	1	9953	1	-1293	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGCACATTCAAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	174169561	174178584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_174169735_174169900_174172228_174176004_174176078_174178539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015770	chr2	+	548	2	FSM	ENSMUSG00000027523.21	ENST00000491348.5	539	2	-1	-8	-1	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCGTCTGTCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	174176001	174179885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_174176078_174179413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015771	chr2	+	537	2	NNC	ENSMUSG00000027523.21	novel	539	2	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTTGCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	174176008	174179877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_174176082_174179413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015772	chr2	+	479	1	Genic_Genomic	ENSMUSG00000027523.21	novel	NA	NA	NA	NA	3396	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTGCGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	174179400	174179879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_174179400_174179900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015773	chr2	+	273	3	ISM	ENSMUSG00000027523.21	ENST00000603546.2	1489	12	10739	3446	-2664	-3205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGCTGTCCCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	174183445	174185090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_174183501_174183602_174183723_174184992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015774	chr2	+	271	3	ISM	ENSMUSG00000027523.21	ENST00000603546.2	1489	12	10896	1616	-2507	-1375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTACGCGTGCGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	174183602	174186920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_174183723_174184992_174185091_174186867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015775	chr2	+	606	6	ISM	ENSMUSG00000027523.21	ENST00000603546.2	1489	12	12286	686	-1117	-445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGACTTGTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	174184992	174187850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015776	chr2	+	895	4	ISM	ENSMUSG00000027523.21	ENSMUST00000238267.2	1071	7	1060	-7	1060	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTTTGATTTGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	174187169	174188544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_174187356_174187441_174187573_174187782_174187851_174188034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015777	chr2	-	563	2	NNC	ENSMUSG00000090625.2	novel	1484	13	NA	NA	-32	-15678	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGTCGCTACAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	174188537	174187789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_174187848_174188032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015778	chr2	+	508	1	NIC	ENSMUSG00000027523.21	novel	2465	13	NA	NA	1920	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	174188029	174188537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_174188000_174188500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015779	chr2	+	707	3	ISM	ENSMUSG00000016253.13	ENSMUST00000016397.7	2280	15	10675	-1	10675	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTACTCATTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	174268318	174269296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_174268423_174268609_174268740_174268823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015780	chr2	-	1359	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	83	-1	83	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTACTTTATTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	174280749	174269284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015781	chr2	-	512	2	ISM	ENSMUSG00000016252.8	ENST00000395659.1	567	3	1390	0	1390	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGAAGCTGGTTACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	174304432	174300124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_174300142_174303937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015782	chr2	-	423	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTGTTTCTGTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	174305899	174302863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_174303015_174304292_174304423_174305757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015783	chr2	-	157	1	Genic_Genomic	ENSMUSG00000016252.8	novel	NA	NA	NA	NA	2802	1	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTGTTTCTGTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	174303020	174302863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_174302900_174303000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015784	chr2	-	295	3	NNC	ENSMUSG00000016252.8	novel	421	3	NA	NA	-15	-58	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCATCTCGTTGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	174305837	174302922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_174303015_174304299_174304423_174305757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015785	chr2	-	538	2	ISM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	82	1079	6	-1079	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATGTAACGGTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	174305816	174303943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_174304423_174305757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015786	chr2	-	881	1	Genic_Genomic	ENSMUSG00000016257.16	novel	NA	NA	NA	NA	3558	7	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTCCCATCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	174307733	174306852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_174306900_174307700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015787	chr2	-	1501	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	58	-6	58	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTCTTCCCATCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	174314816	174306853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015788	chr2	-	649	4	NIC	ENSMUSG00000016257.16	novel	731	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGGATGTAAGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	174311298	174307427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_174307730_174308518_174308622_174308728_174308804_174311129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015789	chr2	-	722	5	NNC	ENSMUSG00000016257.16	novel	731	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGGATGTAAGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	174314697	174307427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_174307730_174308518_174308622_174308732_174308804_174311125_174311299_174314624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015790	chr2	-	732	5	FSM	ENSMUSG00000016257.16	ENST00000371033.9	731	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGGATGTAAGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	174314711	174307427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174311129_174311299_174314624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015791	chr2	+	1063	4	FSM	ENSMUSG00000027524.10	ENST00000371025.7	1079	4	16	0	13	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTAAGTCAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	174602604	174624040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_174602812_174603305_174603619_174620380_174620558_174623674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015792	chr2	+	862	3	NNC	ENSMUSG00000027524.10	novel	1079	4	NA	NA	704	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTAAGTCAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	174603295	174624040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_174603619_174620384_174620558_174623674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015793	chr2	+	865	3	ISM	ENSMUSG00000027524.10	ENST00000371025.7	1079	4	708	0	705	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTAAGTCAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	174603296	174624040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_174603619_174620380_174620558_174623674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015794	chr2	-	700	3	FSM	ENSMUSG00000090093.9	ENSMUST00000109059.8	703	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGGTAAAGCCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	174983789	174974274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_174974783_174974988_174975116_174983724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015795	chr2	-	733	1	Genic_Genomic	ENSMUSG00000078903.11	novel	NA	NA	NA	NA	5823	436	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATTAGATTGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	175039031	175038298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_175038300_175039000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015796	chr2	-	764	2	ISM	ENSMUSG00000078903.11	ENSMUST00000165892.8	1665	4	5127	2056	5127	-28	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGATCACTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	175039727	175038762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_175039399_175039599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015797	chr2	+	717	1	FSM	ENSMUSG00000084323.5	ENSMUST00000121572.2	624	1	-26	-67	-26	67	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCACAGCTTTAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	175112322	175113039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_175112300_175113000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015798	chr2	-	1438	4	ISM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	-18	4139	-18	-1351	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	175180008	175167886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_175169060_175169264_175169392_175176415_175176471_175179925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015799	chr2	-	354	1	NIC	ENSMUSG00000078897.11	novel	1497	4	NA	NA	8341	405	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTAACCAATGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	175265634	175265280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_175265300_175265600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015800	chr2	-	1301	2	ISM	ENSMUSG00000078897.11	ENSMUST00000109046.10	1497	4	7026	1351	7026	242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	175266949	175265443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_175266617_175266821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015801	chr2	+	1273	3	FSM	ENSMUSG00000078896.12	ENSMUST00000109042.10	1271	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCCCATTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	175311777	175321132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_175311916_175319791_175319919_175320124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015802	chr2	+	1356	3	FSM	ENSMUSG00000094475.8	ENSMUST00000177700.8	195	3	-53	-1108	-53	1108	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	175435717	175444302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_175435774_175442797_175442925_175443129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015803	chr2	+	1301	2	ISM	ENSMUSG00000094932.8	ENSMUST00000189494.3	1494	3	-1	1351	-1	1108	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	175540355	175541861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_175540484_175540688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015804	chr2	+	1176	1	NIC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	329	1108	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	175540685	175541861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_175540700_175541900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015805	chr2	-	619	1	FSM	ENSMUSG00000083481.5	ENSMUST00000118709.2	624	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACTCGTAGTGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	175597394	175596775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_175596800_175597400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015806	chr2	+	826	2	ISM	ENSMUSG00000078887.11	ENSMUST00000109012.4	1665	4	5146	1975	5146	-383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTTGAACAACATACTA	NA	NA	NA	NA	NA	NA	NA	NA	175670039	175671066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_175670149_175670349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015807	chr2	+	736	1	ISM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	9702	0	5820	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATTAGATTGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	175670713	175671449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_175670700_175671400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015808	chr2	+	1302	2	ISM	ENSMUSG00000078886.13	ENSMUST00000109008.4	1497	4	7026	1350	7026	-161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGTGTAAGAAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	175767760	175769267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_175767889_175768093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015809	chr2	+	386	1	ISM	ENSMUSG00000078886.13	ENSMUST00000109007.8	1621	4	11919	0	8308	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	175769042	175769428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_175769000_175769400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015810	chr2	+	2054	3	FSM	ENSMUSG00000089951.9	ENSMUST00000127687.8	1127	3	5	-932	5	932	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACAAAGTGGTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	176115458	176125811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_176115528_176123621_176123749_176123953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015811	chr2	-	420	1	NIC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	8274	163	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	176166679	176166259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_176166300_176166700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015812	chr2	-	1301	2	ISM	ENSMUSG00000078881.11	ENSMUST00000122097.9	1497	4	7026	1351	7026	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	176167927	176166421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_176167595_176167799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015813	chr2	-	413	1	NIC	ENSMUSG00000078880.11	novel	1628	5	NA	NA	11875	163	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	176316236	176315823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_176315800_176316200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015814	chr2	-	1431	4	FSM	ENSMUSG00000078880.11	ENSMUST00000119149.8	1458	4	28	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAGTGTAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	176328108	176315985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_176317159_176317363_176317491_176324514_176324570_176328032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015815	chr2	+	1265	3	FSM	ENSMUSG00000078879.11	ENSMUST00000121956.8	1271	3	8	-2	8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCCCATTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	176362322	176371669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_176362453_176370328_176370456_176370661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015816	chr2	+	686	2	FSM	ENSMUSG00000078877.12	ENSMUST00000179435.2	192	2	-1	-493	-1	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGCTGTGAATGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	176499153	176500045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_176499282_176499487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015817	chr2	+	2272	3	ISM	ENSMUSG00000078877.12	ENSMUST00000132883.8	2505	4	5175	184	46	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAATGTAAACAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	176499200	176502832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_176499282_176499487_176499549_176500702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015818	chr2	+	679	1	Genic_Genomic	ENSMUSG00000078877.12	novel	NA	NA	NA	NA	579	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGAGTTCTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	176499733	176500412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_176499700_176500400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015819	chr2	+	2257	1	Genic_Genomic	ENSMUSG00000078877.12	novel	NA	NA	NA	NA	1607	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAGCCTTTGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	176500761	176503018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_176500800_176503000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015820	chr2	-	474	1	Genic_Genomic	ENSMUSG00000078867.10	novel	NA	NA	NA	NA	6143	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCATATAGATAAAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	177080349	177079875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_-_177079900_177080300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015821	chr2	+	339	1	ISM	ENSMUSG00000078866.11	ENSMUST00000099002.10	794	4	13058	0	12945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGCTATTTTGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	177169583	177169922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_177169600_177169900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015822	chr2	+	1226	3	FSM	ENSMUSG00000074521.10	ENSMUST00000108935.8	1451	3	4	221	4	-221	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCAAATATGTGAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	177538892	177547356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_177539047_177546077_177546205_177546411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015823	chr2	-	740	3	ISM	ENSMUSG00000078862.11	ENSMUST00000178829.8	1665	4	-53	2137	-53	4	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGCTGTGTGAATATAAA	NA	NA	NA	NA	NA	NA	NA	NA	177595530	177589466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_177590024_177590229_177590357_177595474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015824	chr2	-	1372	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATTTTAAAAGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	177720269	177710282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_177711409_177711615_177711743_177720150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015825	chr2	+	791	3	ISM	ENSMUSG00000027525.19	ENSMUST00000133267.3	1668	5	5028	415	5028	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTCACTTTCTTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	177974612	177977869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_177974756_177975843_177975921_177977298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015826	chr2	+	1834	2	NNC	ENSMUSG00000085704.2	novel	1905	2	NA	NA	93	18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAGCGGAGGGATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	179618738	179620824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_179618990_179619241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015827	chr2	-	911	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179684223	179678166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015828	chr2	-	742	6	NNC	ENSMUSG00000027566.16	novel	914	7	NA	NA	2944	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179681259	179678166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_-_179678367_179678730_179678785_179679169_179679296_179679857_179679981_179680517_179680643_179681145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015829	chr2	-	328	1	ISM	ENSMUSG00000027566.16	ENSMUST00000129529.9	1157	7	5709	0	5709	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179678494	179678166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_179678200_179678500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015830	chr2	+	1120	5	ISM	ENSMUSG00000039069.20	ENSMUST00000087563.7	1346	6	3488	0	3488	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	179723903	179727695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015831	chr2	+	172	2	ISM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	101	25593	44	-24510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATTCTTTGATGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	179761199	179778880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179761263_179778771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015832	chr2	+	558	5	ISM	ENSMUSG00000039050.9	ENST00000439951.6	1549	13	17635	16422	-71	-16422	internal_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATCAGGTAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	179778790	179786968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015833	chr2	+	495	4	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	4033	12989	4033	-12989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGACAGGTGCAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	179782894	179790401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179782974_179786624_179786760_179786881_179786980_179790218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015834	chr2	+	524	4	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	7762	11312	7762	-11312	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACAGGCCCATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	179786623	179792078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179786760_179786881_179786980_179790218_179790402_179791971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015835	chr2	+	607	5	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	8017	8274	8017	-8274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTCAGCTGCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	179786878	179795116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015836	chr2	+	463	4	ISM	ENSMUSG00000039050.9	ENST00000439951.6	1549	13	33838	0	16132	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGGAGCAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	179794993	179803390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179795116_179797059_179797201_179800821_179800913_179803281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015837	chr2	+	121	2	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	18484	-3668	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCATGGAGAACGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	179797345	179799722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_179797366_179799621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015838	chr2	+	151	2	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	20757	2545	20757	-2545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCTAGAGGAAAAGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	179799618	179800845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179799746_179800821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015839	chr2	+	163	1	Genic_Genomic	ENSMUSG00000039050.9	novel	NA	NA	NA	NA	25451	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTTGAAGGTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	179804312	179804475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_179804300_179804500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015840	chr2	+	416	2	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	3	4038	3	-4038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGCCTGTAGCCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	179813280	179814041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179813482_179813826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015841	chr2	+	458	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	550	2249	550	-2249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACCTAGACCTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	179813827	179815830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179814041_179814648_179814766_179815702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015842	chr2	+	286	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	2421	1351	2421	-1351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATCCAGGTGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	179815698	179816728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179815827_179816101_179816189_179816657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015843	chr2	+	369	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	2847	904	2847	-904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAGCAAGGTAAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	179816124	179817175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179816189_179816657_179816740_179816952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015844	chr2	+	493	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	3681	325	3681	-325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATCCCCCATCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	179816958	179817754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179817186_179817390_179817549_179817646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015845	chr2	+	405	3	ISM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	4161	21	4161	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTCCTTGTACCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	179817438	179818058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_179817549_179817646_179817750_179817866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015846	chr2	+	229	2	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	4402	-51	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGATTTGCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	179817679	179818028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr2_+_179817747_179817866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015847	chr2	+	395	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGCTGTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	179899168	179900238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015848	chr2	+	1513	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	14	-17	14	17	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	180224518	180228097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015849	chr2	+	164	2	ISM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	266	4797	266	-4797	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGCACAACTACCCGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	180231303	180232832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180231415_180232779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015850	chr2	+	160	2	ISM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	2371	3330	2371	-3330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGATTGAGCCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	180233408	180234299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180233489_180234219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015851	chr2	+	180	2	ISM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	3863	2150	3863	-2150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCAGCCACGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	180234900	180235479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180234964_180235362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015852	chr2	+	157	2	ISM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	4378	1568	4378	-1568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACTACCAGGCACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	180235415	180236061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180235512_180236000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015853	chr2	+	153	1	ISM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	6439	0	6439	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGCCGTGTTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	180237476	180237629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180237500_180237600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015854	chr2	-	1364	5	FSM	ENSMUSG00000038932.14	ENST00000217162.5	1428	5	64	0	64	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATTCATGAAATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	180284394	180277044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_180277189_180280196_180280444_180282093_180282257_180282673_180282858_180283768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015855	chr2	+	1638	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	19	-2	19	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTCTAAAAAGTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	180351928	180360528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015856	chr2	-	332	1	ISM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	16241	0	16241	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	180546501	180546169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_180546200_180546500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015857	chr2	+	184	2	ISM	ENSMUSG00000027575.20	ENSMUST00000108861.8	1885	13	452	10584	397	-10254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATGACCTTTGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	180609489	180612909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180609608_180612843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015858	chr2	+	179	2	ISM	ENSMUSG00000027575.20	ENSMUST00000184394.2	1209	12	-9	9687	6	-9687	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTTGAACCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	180612838	180613476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180612908_180613366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015859	chr2	+	167	2	ISM	ENSMUSG00000027575.20	ENSMUST00000184394.2	1209	12	531	9318	531	-9318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCCGAGAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	180613378	180613845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180613477_180613776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015860	chr2	+	197	2	ISM	ENSMUSG00000027575.20	ENSMUST00000184394.2	1209	12	1005	8575	1005	-8575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTCCTCTGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	180613852	180614588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180613949_180614487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015861	chr2	+	188	2	ISM	ENSMUSG00000027575.20	ENSMUST00000184394.2	1209	12	2403	7213	2403	-7213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGCCTAGGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	180615250	180615950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180615341_180615852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015862	chr2	+	188	3	ISM	ENSMUSG00000027575.20	ENSMUST00000184394.2	1209	12	3004	4018	3004	-4018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAAGAGAAACTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	180615851	180619145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180615950_180618099_180618157_180619112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015863	chr2	+	184	3	ISM	ENSMUSG00000027575.20	ENST00000547204.5	1230	12	8130	957	8115	-901	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTAGTCCACGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	180620962	180622262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180621021_180621453_180621514_180622196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015864	chr2	+	144	3	ISM	ENSMUSG00000027575.20	ENSMUST00000185115.8	1393	13	8142	1038	8127	-935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTTCTCTGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	180620974	180622228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180621021_180621453_180621514_180622190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015865	chr2	+	290	3	ISM	ENSMUSG00000027575.20	ENST00000547204.5	1230	12	8619	233	8604	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGAGCTCGGACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	180621451	180622986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180621514_180622196_180622268_180622829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015866	chr2	+	177	1	ISM	ENSMUSG00000027575.20	ENSMUST00000108862.8	2382	12	14025	1032	10195	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCCTCCTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	180623042	180623219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180623000_180623200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015867	chr2	+	154	1	ISM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	15139	0	11318	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTGCTTGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	180624165	180624319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180624200_180624300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015868	chr2	+	2735	1	FSM	ENSMUSG00000070461.4	ENSMUST00000189441.2	3352	1	617	0	617	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGACTGGTCTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	180626333	180629068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_180626300_180629100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015869	chr2	-	306	1	ISM	ENSMUSG00000016346.18	ENSMUST00000149964.9	8209	17	53869	5461	53782	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGCCCCATGCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	180723138	180722832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_180722800_180723100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015870	chr2	+	1155	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	6	-1	6	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCCAAGGTTGGGGATAC	NA	NA	NA	NA	NA	NA	NA	NA	180829045	180830565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015871	chr2	+	690	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	-1	0	-1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	180829127	180830297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015872	chr2	-	1290	1	ISM	ENSMUSG00000038705.14	ENSMUST00000049032.13	4121	10	35297	0	35297	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTGTCTCTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	180894531	180893241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_180893200_180894500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015873	chr2	-	250	2	ISM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	7096	304	0	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTGGACCCAGCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	180949197	180948555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_180948617_180949008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015874	chr2	-	250	2	FSM	ENSMUSG00000027581.13	ENST00000604037.1	246	2	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTATTGGACCCAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	180949201	180948556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_180948614_180949008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015875	chr2	+	239	2	Antisense	novelGene_ENSMUSG00000027581.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGCACAGAGTTAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	180948556	180949197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr2_+_180948619_180949020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015876	chr2	+	419	3	ISM	ENSMUSG00000038685.19	ENST00000360203.11	3052	29	98	31540	98	-31540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCGGCATATTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	180962724	180964687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180962851_180964104_180964304_180964593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015877	chr2	+	419	3	ISM	ENSMUSG00000038685.19	ENST00000508582.7	3132	29	1476	31028	-5	-31028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTGAAGTGAAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	180964102	180965199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180964304_180964593_180964688_180965075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015878	chr2	+	263	2	ISM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	30454	275	30454	-275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCCTGCTTAAAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	180994561	180995952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180994642_180995769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015879	chr2	+	234	1	ISM	ENSMUSG00000038685.19	ENSMUST00000098971.11	4307	33	36644	0	34068	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	180998175	180998409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_180998200_180998400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015880	chr2	-	1118	1	ISM	ENSMUSG00000038671.16	ENSMUST00000170190.8	2483	7	6458	139	6405	4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTAGCCAGTCACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	181000739	180999621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_180999600_181000700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015881	chr2	-	1316	4	ISM	ENSMUSG00000038671.16	ENSMUST00000108808.8	1133	8	3922	-643	3922	-624	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTTATAGCCAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	181003222	181000249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015882	chr2	+	200	2	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	515	2269	515	-2266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGACTGCCAACAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	181007979	181020309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181008046_181020175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015883	chr2	+	277	2	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	12709	1894	12709	-1891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTATGCCAGAGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	181020173	181020684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181020310_181020543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015884	chr2	+	199	2	ISM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	13425	1091	13158	-1091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTGCTGCCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	181020622	181021484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181020700_181021362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015885	chr2	+	940	3	ISM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	13897	-2	13897	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCAGTGGAGACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	181021361	181022580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181021483_181021566_181021973_181022167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015886	chr2	+	157	1	ISM	ENSMUSG00000027582.17	ENSMUST00000029105.12	2293	7	15699	11	14955	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTCTCAGTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	181022419	181022576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181022400_181022600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015887	chr2	+	1321	4	ISM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	5730	1147	5680	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGGTAGGGGATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	181144703	181158017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181144729_181149958_181150061_181154831_181154881_181156872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015888	chr2	+	1767	1	Genic_Genomic	ENSMUSG00000000827.19	novel	NA	NA	NA	NA	18971	2	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTAAGGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	181157994	181159761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_181158000_181159800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015889	chr2	+	707	3	ISM	ENSMUSG00000000826.17	ENSMUST00000108796.2	934	5	26568	-178	26568	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCTACATCTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	181189307	181191561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181189347_181190462_181190635_181191065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015890	chr2	+	619	1	ISM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	34030	0	33568	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTTGTCTTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	181196307	181196926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181196300_181196900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015891	chr2	-	684	5	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	11774	-1	11774	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAAATGATCGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	181211991	181210953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015892	chr2	-	478	3	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	11372	747	11372	-747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCAGCCAGGGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	181212393	181211701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_181211825_181211925_181211989_181212101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015893	chr2	-	602	4	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	7688	1160	7688	-1160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCCTTTCAGGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	181216077	181212114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_181212392_181214866_181214929_181215007_181215198_181216004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015894	chr2	-	524	4	ISM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	7214	4070	7214	-4070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGGTGCCCAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	181216551	181215024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_181215198_181216004_181216077_181216161_181216333_181216443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015895	chr2	+	440	4	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	19246	24196	19243	-24196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTGTTGTGGACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	181262354	181273248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181262441_181263579_181263757_181263954_181264111_181273227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015896	chr2	+	492	3	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	31449	18539	31446	-18539	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTTCACTCAGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	181274557	181278905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181274711_181277825_181277945_181278685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015897	chr2	+	438	3	ISM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	45970	6054	45967	-6054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGCCTCTGTCAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	181289078	181291390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181289221_181290818_181290939_181291214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015898	chr2	+	405	3	ISM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	51192	-1	51192	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGGCTTGGGCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	181294303	181297454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181294342_181296628_181296756_181297214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015899	chr2	-	530	1	ISM	ENSMUSG00000046470.6	ENSMUST00000054491.6	1620	2	1275	0	1275	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATCACTAGCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	181312158	181311628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_181311600_181312200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015900	chr2	-	1423	6	FSM	ENSMUSG00000002458.14	ENST00000332298.9	818	6	0	-605	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTTATGGTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	181335766	181330293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_-_181331089_181331169_181331405_181331490_181331570_181333025_181333148_181333282_181333380_181335671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015901	chr2	-	1015	1	NIC	ENSMUSG00000002458.14	novel	642	5	NA	NA	2297	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGCTGTTGTTATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	181331313	181330298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_-_181330300_181331300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015902	chr2	-	1028	2	ISM	ENSMUSG00000002458.14	ENSMUST00000108769.8	1460	5	4153	153	2040	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGTGTGCAGACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	181331570	181330452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_181331405_181331494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015903	chr2	-	115	2	ISM	ENSMUSG00000002458.14	ENSMUST00000108769.8	1460	5	-31	3057	12	-2458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTGGCACCACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	181335754	181333356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_-_181333389_181335671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015904	chr2	+	952	6	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	10468	8017	10468	-8017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGCCAGGGGCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	181442807	181449453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015905	chr2	+	859	6	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	12454	4448	12454	-4448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGCCCTGCTCCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	181444793	181453022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr2_+_181444823_181446719_181446935_181448308_181448434_181449183_181449454_181452037_181452193_181452957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015906	chr2	+	1401	3	NIC	ENSMUSG00000027589.15	novel	1403	4	NA	NA	-1	8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAATATAGTTGTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	181484183	181498833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr2_+_181484499_181486188_181486292_181497850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015907	chr2	+	835	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	142	1971	142	-1971	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTCTACCAACTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	181506271	181510652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr2_+_181506363_181507738_181507827_181509996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015908	chr2	+	700	1	Genic_Genomic	ENSMUSG00000038628.9	novel	NA	NA	NA	NA	5795	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGTGCATATAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	181511924	181512624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr2_+_181511900_181512600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015909	chr3	+	278	1	FSM	ENSMUSG00000069125.3	ENSMUST00000091375.3	395	1	219	-102	219	102	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAAGACGTTTATCAC	NA	NA	NA	NA	NA	NA	NA	NA	3857176	3857454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_3857200_3857500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015910	chr3	-	297	1	ISM	ENSMUSG00000086224.9	ENSMUST00000128815.9	1020	3	42941	0	42941	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGATATTTAAAATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	5242942	5242645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_5242600_5242900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015911	chr3	-	393	2	FSM	ENSMUSG00000086224.9	ENST00000518143.2	441	2	48	0	-37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACATGGGCTCGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5285920	5275374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_5275577_5285729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015912	chr3	-	204	1	NIC	ENSMUSG00000086224.9	novel	441	2	NA	NA	10305	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACATGGGCTCGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5275578	5275374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_5275400_5275600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015913	chr3	-	2049	5	FSM	ENSMUSG00000040374.14	ENSMUST00000164828.8	2051	5	6	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGAGGTCTTTTGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	5641204	5625243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_5626825_5628224_5628333_5628679_5628790_5635546_5635690_5641097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015914	chr3	-	663	1	ISM	ENSMUSG00000040374.14	ENSMUST00000165309.8	2038	6	14989	311	2568	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGCATTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5626221	5625558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_5625600_5626200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015915	chr3	-	1377	2	FSM	ENSMUSG00000040374.14	ENSMUST00000191916.6	1376	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGCATTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5628790	5625558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_5626825_5628679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015916	chr3	-	859	4	FSM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	55	673	38	-669	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAACTTCTCTGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	5641150	5626232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_5626821_5628224_5628333_5628679_5628790_5641097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015917	chr3	+	478	1	FSM	ENSMUSG00000103034.2	ENSMUST00000192045.2	490	1	13	-1	13	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGCACAGAGCTTAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	5815878	5816356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_5815900_5816400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015918	chr3	+	1886	2	ISM	ENSMUSG00000027499.13	ENSMUST00000193330.2	631	3	8401	-1426	8401	1426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGACAATCTCCGATAA	NA	NA	NA	NA	NA	NA	NA	NA	7502518	7508899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_7502576_7507070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015919	chr3	+	1839	1	ISM	ENSMUSG00000027499.13	ENSMUST00000028999.12	3617	3	76858	0	14470	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCTCTCAAGAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	7508587	7510426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_7508600_7510400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015920	chr3	+	1311	2	ISM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	35592	1252	35589	509	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTAGTTTATATCATTA	NA	NA	NA	NA	NA	NA	NA	NA	7604134	7617644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_7604244_7616442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015921	chr3	+	1203	1	ISM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	49151	0	49148	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCTTTTTTTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	7617693	7618896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_7617700_7618900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015922	chr3	-	851	4	FSM	ENSMUSG00000040329.15	ENST00000379113.6	849	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAACAGGACATGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	7678764	7638905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_7639008_7642233_7642315_7669090_7669225_7678230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015923	chr3	+	714	4	ISM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	15	6626	15	-6626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAAGAGCAGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	8574434	8620040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015924	chr3	+	1026	3	ISM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	36212	681	36212	-681	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTCCTCATGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	8610631	8625985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_8610806_8619851_8620044_8625325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015925	chr3	+	677	1	Genic_Genomic	ENSMUSG00000027500.11	novel	NA	NA	NA	NA	51574	4	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGGTCTGGTCTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	8625993	8626670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_8626000_8626700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015926	chr3	-	782	1	ISM	ENSMUSG00000040289.9	ENSMUST00000042412.5	2423	5	3116	0	2917	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTCTGTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	8729200	8728418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_8728400_8729200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015927	chr3	-	270	1	Genic_Genomic	ENSMUSG00000040269.6	novel	NA	NA	NA	NA	121504	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCCGTGGTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	8867474	8867204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_8867200_8867500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015928	chr3	-	783	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCGTGGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8988978	8867205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_8867475_8965045_8965228_8988646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015929	chr3	-	2860	1	ISM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	76271	0	35594	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCACTCTCTCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	8993512	8990652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_8990700_8993500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015930	chr3	-	2877	2	NNC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	29006	275	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTGTTATGTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	9000100	8993410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_8996235_9000047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015931	chr3	-	1057	1	ISM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	74070	4004	33393	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGGTTTCAATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	8995713	8994656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_8994700_8995700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015932	chr3	+	288	1	FSM	ENSMUSG00000103011.2	ENSMUST00000193160.2	445	1	339	-182	339	182	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGGAAATCCTTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	9138165	9138453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_9138200_9138500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015933	chr3	+	1473	3	ISM	ENSMUSG00000069114.9	ENST00000610895.2	2746	6	2	3301	2	-3301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGTAAGATCTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	9316656	9343416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_9317141_9329594_9330481_9343313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015934	chr3	+	132	2	ISM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	2536	1064	2536	-1064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAACTGAAGGATGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10080143	10080603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_10080204_10080531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015935	chr3	+	109	2	ISM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	2943	515	2943	-515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCGGGTCTATGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10080550	10081152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_10080634_10081126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015936	chr3	+	120	1	ISM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	3940	0	3940	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAATGGTGTGATTATA	NA	NA	NA	NA	NA	NA	NA	NA	10081547	10081667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_10081500_10081700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015937	chr3	-	331	1	Genic_Genomic	ENSMUSG00000027531.17	novel	NA	NA	NA	NA	19087	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTTTTTCTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	10377345	10377014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_10377000_10377300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015938	chr3	-	442	2	ISM	ENSMUSG00000027531.17	ENSMUST00000191670.6	1100	8	15140	125	15140	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAATATACAAAAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	10381292	10380049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10380362_10381162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015939	chr3	-	347	4	ISM	ENSMUSG00000027531.17	ENSMUST00000191670.6	1100	8	-5	11256	-5	-11256	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCGTGCATCGGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	10396437	10391180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10391272_10393404_10393539_10394002_10394069_10396381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015940	chr3	-	287	1	Genic_Genomic	ENSMUSG00000039795.15	novel	NA	NA	NA	NA	8316	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCATTTGATCTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	10405298	10405011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_10405000_10405300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015941	chr3	-	369	2	ISM	ENSMUSG00000039795.15	ENSMUST00000108377.8	936	8	10190	48	7431	47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTGTTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	10406183	10405726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10405966_10406053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015942	chr3	-	564	4	ISM	ENSMUSG00000039795.15	ENST00000521895.5	727	6	2524	-6	2524	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTATAAGCAGAAACCACT	NA	NA	NA	NA	NA	NA	NA	NA	10411090	10405767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10405958_10406053_10406210_10409860_10409983_10410994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015943	chr3	-	192	1	ISM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	10412	761	7649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATCCTTATAAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	10405965	10405773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10405800_10406000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015944	chr3	+	323	2	Antisense	novelGene_ENSMUSG00000039795.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTCTTTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	10405773	10406193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_+_10405969_10406065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015945	chr3	-	258	2	NNC	ENSMUSG00000039795.15	novel	727	6	NA	NA	7472	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCAGAATCCTTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	10406142	10405778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_10405938_10406043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015946	chr3	-	367	3	NIC	ENSMUSG00000039795.15	novel	727	6	NA	NA	3676	-47	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTGACTCTTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	10409938	10405820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_10405958_10406053_10406206_10409860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015947	chr3	-	451	4	ISM	ENSMUSG00000039795.15	ENST00000521895.5	727	6	2310	334	2310	-334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGCTTCTCTCGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	10411304	10406107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10406210_10409860_10409983_10410994_10411087_10411169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015948	chr3	-	320	4	ISM	ENSMUSG00000039795.15	ENST00000521895.5	727	6	0	4154	0	-4154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCGGCGAAGGTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	10413614	10409927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10409983_10410994_10411087_10411169_10411298_10413569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015949	chr3	-	578	1	ISM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	21379	329	21364	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGAGTTTCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	10483783	10483205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10483200_10483800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015950	chr3	-	193	2	ISM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	4559	16251	4559	-15460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGAACCTAGTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10500588	10499456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_10499567_10500505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015951	chr3	-	364	1	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCTGTTTCTCACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	11078886	11078522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_-_11078500_11078900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015952	chr3	+	186	2	ISM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	16553	14609	16553	-14609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTCTGGCGTTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14615436	14616554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_14615516_14616447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015953	chr3	+	132	2	ISM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	28478	3579	28478	-3579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGCAGAGAGAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	14627361	14627584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_14627393_14627483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015954	chr3	-	348	3	ISM	ENSMUSG00000078784.9	ENSMUST00000108365.4	559	4	1575	-5	1575	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	14674706	14671343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_14671469_14672236_14672354_14674600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015955	chr3	-	126	1	NIC	ENSMUSG00000078784.9	novel	435	4	NA	NA	4812	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	14671469	14671343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_14671300_14671500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015956	chr3	-	1193	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	-19	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	14676340	14671348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_14672354_14674600_14674718_14676269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015957	chr3	-	241	3	NNC	ENSMUSG00000078784.9	novel	1174	3	NA	NA	-3	-922	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAGCCTTTCTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	14676324	14672274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_14672354_14674600_14674718_14676279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015958	chr3	+	1985	5	ISM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	8930	-1	8930	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCTTTTGGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	14715716	14728063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015959	chr3	-	377	3	FSM	ENSMUSG00000027556.16	ENST00000522389.5	370	3	-1	-6	-1	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGAATGAGTCCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	14835965	14831589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_14831713_14832463_14832620_14835867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015960	chr3	-	127	1	NIC	ENSMUSG00000027556.16	novel	1194	8	NA	NA	4243	1	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGCAAGGAATGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	14831721	14831594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_14831600_14831700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015961	chr3	-	197	1	FSM	ENSMUSG00000097790.2	ENSMUST00000181423.2	219	1	167	-145	167	145	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAAGTTGGAGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	14867467	14867270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_14867300_14867500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015962	chr3	+	1492	7	FSM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	9	178	9	-178	multi-exon	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTATTAAAAACAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	14928606	14937405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_14928666_14929309_14929508_14931862_14931982_14933408_14933502_14934294_14934358_14935101_14935258_14936601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015963	chr3	+	792	4	ISM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	4802	511	4802	-511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGATGGGCCCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	14933399	14937072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_14933502_14934294_14934358_14935101_14935258_14936601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015964	chr3	+	835	4	NNC	ENSMUSG00000027559.6	novel	1679	7	NA	NA	4811	-455	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACTTAAGTGAAAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	14933408	14937128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_14933502_14934298_14934358_14935101_14935258_14936601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015965	chr3	+	862	3	ISM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	5675	361	5675	-361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGTTAAAAATTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	14934272	14937222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_14934358_14935101_14935258_14936601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015966	chr3	+	849	2	ISM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	6495	298	6495	-298	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGCCAGGTGTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	14935092	14937285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_14935258_14936601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015967	chr3	+	902	1	Genic_Genomic	ENSMUSG00000027559.6	novel	NA	NA	NA	NA	8102	18	mono-exon	FALSE	NA	NA	NA	NA	NA	1176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTTTTCCTTAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	14936699	14937601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_14936700_14937600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015968	chr3	+	1376	1	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGCATGGAACTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	15685406	15686782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_+_15685400_15686800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015969	chr3	+	1569	3	ISM	ENSMUSG00000047213.15	ENST00000617200.1	5051	4	195	11817	76	-9178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTCCCAATAACCAATT	NA	NA	NA	NA	NA	NA	NA	NA	16237532	16259381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_16237685_16238085_16238111_16257989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015970	chr3	+	3961	3	ISM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	6225	848	6144	-666	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCAGTATATTGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	16243600	16270353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_16243728_16257989_16259589_16268118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015971	chr3	+	2293	1	ISM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	31533	0	31452	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	16268908	16271201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_16268900_16271200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015972	chr3	-	1672	1	ISM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	29992	0	24620	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTATAATTACTAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	19187237	19185565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_19185600_19187200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015973	chr3	-	1804	3	ISM	ENSMUSG00000027599.10	ENST00000458464.3	2584	5	22569	467	22569	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACCGTACAATCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	19189288	19186776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_19188388_19189006_19189082_19189170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015974	chr3	+	868	3	ISM	ENSMUSG00000027601.14	ENSMUST00000117529.8	1896	8	29911	158	29130	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTCTGTGTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	19271403	19273725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_19271588_19272325_19272486_19273201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015975	chr3	+	631	1	ISM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	32077	0	32077	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGTATATTTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	19274350	19274981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_19274400_19275000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015976	chr3	+	1091	5	FSM	ENSMUSG00000060913.7	ENST00000350034.4	1073	5	-1	-17	-1	17	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACACCACCACCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	19698538	19745894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_19698941_19699437_19699611_19713291_19713458_19715948_19716045_19745640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015977	chr3	-	438	1	ISM	ENSMUSG00000019528.19	ENSMUST00000118015.9	1922	7	32796	0	30346	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTGTTTAAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	20176685	20176247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_20176200_20176700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015978	chr3	-	691	3	ISM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	17037	350	14808	56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACATTAAGCTACTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	20192223	20176600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_20177029_20179421_20179642_20192180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015979	chr3	-	643	3	ISM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	27390	0	27390	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTTTTTTTTAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	20179641	20176656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_20177029_20177285_20177337_20179421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015980	chr3	-	452	3	ISM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	2166	2823	2166	-2823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCCCTGCTCCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	20204865	20179479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_20179642_20192180_20192308_20204702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015981	chr3	-	458	3	ISM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	0	28064	0	-28064	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGGTAGTTTTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	20207031	20204720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_20204866_20205116_20205292_20206893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015982	chr3	+	426	1	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATAACAAAGACAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	21108203	21108629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_+_21108200_21108600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015983	chr3	+	522	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	-2	-76	-2	76	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTAGTACCTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	24387229	24387751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_24387200_24387800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015984	chr3	-	318	1	ISM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	56322	0	56315	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	27151688	27151370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_27151400_27151700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015985	chr3	+	3050	4	ISM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	39702	1180	39663	-1180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTATCATAAAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	27276815	27297927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_27277046_27280221_27280292_27293680_27293853_27295349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015986	chr3	+	2705	1	ISM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	59289	0	59250	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	27296402	27299107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_27296400_27299100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015987	chr3	-	524	1	ISM	ENSMUSG00000039286.13	ENST00000415807.7	7024	26	294674	0	293762	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTTAAATACTTAACATC	NA	NA	NA	NA	NA	NA	NA	NA	27470785	27470261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_27470300_27470800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015988	chr3	-	541	3	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	281370	3193	281370	-3193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTTCGCGACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	27483177	27473503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_27473752_27480182_27480311_27483012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015989	chr3	-	321	2	Genic_Genomic	ENSMUSG00000070522.5	novel	648	1	NA	NA	38	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACCAAGCGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	28819471	28819072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_28819185_28819262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015990	chr3	+	451	4	FSM	ENSMUSG00000050192.9	ENST00000474096.5	459	4	10	-2	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCCTGCAAATGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	28836172	28848605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_28836366_28836876_28836982_28847873_28847966_28848544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015991	chr3	+	544	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	17	-9	-16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTTCATCAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28859601	28861573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015992	chr3	+	175	2	ISM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	0	822	0	-813	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGATTGCATAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	28859617	28860751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_28859693_28860651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015993	chr3	+	200	3	ISM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	19	634	19	-625	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTTCACATTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	28859636	28860939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_28859693_28860651_28860742_28860885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015994	chr3	+	203	1	Genic_Genomic	ENSMUSG00000039221.11	novel	NA	NA	NA	NA	1755	2	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTCATCAGTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	28861372	28861575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_28861400_28861600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015995	chr3	-	239	1	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	12023	0	12023	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCTGCTTTGTAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	30733442	30733203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_30733200_30733400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015996	chr3	-	529	3	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	6290	154	6290	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAGCCACTTACTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	30739175	30733357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_30733551_30735094_30735263_30739007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015997	chr3	+	232	2	Antisense	novelGene_ENSMUSG00000074653.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTGAGTATCTCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	30733436	30735218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_+_30733549_30735098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015998	chr3	-	256	2	NNC	ENSMUSG00000074653.11	novel	1347	7	NA	NA	6338	1705	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTGACAGAGGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30739127	30735123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_30735260_30739007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000015999	chr3	-	505	3	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	2009	5804	2009	-2179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGAGCTTCCCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	30743456	30739007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_30739176_30741563_30741732_30743287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016000	chr3	-	345	2	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	1294	10080	1294	-6455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAGTGGTTAAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	30744171	30743283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_30743456_30743998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016001	chr3	-	256	2	NNC	ENSMUSG00000074653.11	novel	1347	7	NA	NA	1375	-6459	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTAACAGTGGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	30744090	30743287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_30743456_30744002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016002	chr3	-	330	2	ISM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	0	10793	0	-7168	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGAATTGGAGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	30745465	30743996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_30744167_30745305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016003	chr3	+	228	2	NNC	ENSMUSG00000086189.2	novel	4580	4	NA	NA	3846	-1068	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAGAGGAGAGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	30744079	30745447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_30744170_30745309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016004	chr3	+	2114	6	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	7745	-296	7745	296	intron_retention	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTCTAAAATACCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	30855226	30874195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016005	chr3	+	855	4	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	18961	-1	18961	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATTTAGACATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30866442	30873900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_30866506_30868382_30868503_30872648_30873150_30873729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016006	chr3	+	1584	1	ISM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	26805	0	26347	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGCAGTAGTGATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	30873828	30875412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_30873800_30875400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016007	chr3	-	463	3	ISM	ENSMUSG00000037652.16	ENST00000481639.1	501	4	3476	0	3466	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTCAGTTAATGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	31020082	31012077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_31012236_31015876_31016021_31019921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016008	chr3	+	362	2	ISM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	42	34345	42	-34345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTTCTTTTGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	31049937	31072763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_31050235_31072698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016009	chr3	+	879	2	ISM	ENSMUSG00000027660.17	ENST00000426052.6	2392	8	1487	20754	-132	-20754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTAAAAGCTCTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	31150849	31152209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_31151020_31151500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016010	chr3	-	733	1	Antisense	novelGene_ENSMUSG00000027660.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGACTGGAGGTTTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	31152232	31151499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_-_31151500_31152200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016011	chr3	+	928	3	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	884	5457	884	-5280	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGAGTAGTCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	31151865	31167683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_31152569_31165773_31165872_31167556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016012	chr3	+	749	4	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	14793	1424	14793	-1247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAGGGAGGCCGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	31165774	31171716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_31165872_31167556_31167790_31170964_31171189_31171521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016013	chr3	+	668	3	ISM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	20124	177	20124	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGGGCTTGGTAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	31171105	31172963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_31171189_31171521_31171747_31172603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016014	chr3	+	582	1	ISM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	26934	0	25159	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTGGTTCAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	31176140	31176722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_31176100_31176700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016015	chr3	-	4001	1	ISM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	26886	0	26828	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCGGTTCTGAGTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	32392941	32388940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_32388900_32392900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016016	chr3	-	771	5	ISM	ENSMUSG00000027663.13	ENST00000311417.7	1191	6	4699	-1	4653	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGCTTAGTGCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32415116	32395545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_32395848_32397482_32397584_32397700_32397868_32399606_32399730_32415038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016017	chr3	+	830	1	ISM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	9655	90	4619	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	NA	NA	NA	NA	NA	NA	NA	NA	32574062	32574892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_32574100_32574900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016018	chr3	+	757	1	ISM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	49018	0	46929	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTCAGTTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	32632631	32633388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_32632600_32633400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016019	chr3	-	211	1	ISM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	36043	0	15843	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTGTACCTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	32634691	32634480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_32634500_32634700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016020	chr3	-	768	6	NNC	ENSMUSG00000027669.15	novel	828	6	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGTGACTATATATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	32650470	32639152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_32639376_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016021	chr3	-	813	6	FSM	ENSMUSG00000027669.15	ENST00000466899.6	828	6	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGTGACTATATATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	32650519	32639152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_32639376_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016022	chr3	-	345	2	ISM	ENSMUSG00000027669.15	ENSMUST00000108234.8	2510	11	26642	3602	6510	-2596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTGTGGGACGCT	NA	NA	NA	NA	NA	NA	NA	NA	32644024	32641748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_32641927_32643857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016023	chr3	+	161	1	NIC	ENSMUSG00000102862.2	novel	300	2	NA	NA	2492	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTTTGCTTTTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	32667501	32667662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_32667500_32667700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016024	chr3	-	1427	1	Genic_Genomic	ENSMUSG00000037531.9	novel	NA	NA	NA	NA	10325	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCAAAAGTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32780971	32779544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_32779500_32781000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016025	chr3	-	1917	6	ISM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	2887	942	2887	-942	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAACACTAAGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32788409	32780487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016026	chr3	+	1014	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	65	0	-16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32791203	32805715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016027	chr3	-	772	1	ISM	ENSMUSG00000027674.17	ENSMUST00000108225.10	3109	14	131288	601	34299	1	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAAGGGTGGGATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	33004929	33004157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33004200_33004900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016028	chr3	-	1145	4	ISM	ENSMUSG00000027674.17	ENSMUST00000108221.2	1187	8	30551	-376	30551	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATAGTTTGGGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	33008677	33004402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016029	chr3	-	582	4	ISM	ENSMUSG00000027674.17	ENSMUST00000108221.2	1187	8	28261	2405	28261	-2376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATTCCAGCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	33010967	33007183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33007351_33008476_33008675_33009910_33009982_33010821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016030	chr3	-	232	2	ISM	ENSMUSG00000027674.17	ENSMUST00000108221.2	1187	8	29238	3744	29238	-3715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCAGGCCTCACACGG	NA	NA	NA	NA	NA	NA	NA	NA	33009990	33008522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33008675_33009910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016031	chr3	-	321	3	ISM	ENSMUSG00000027674.17	ENSMUST00000108221.2	1187	8	26211	5149	26211	-5120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCGCCCTCCAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	33013017	33009927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33009982_33010821_33010966_33012894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016032	chr3	-	288	3	ISM	ENSMUSG00000027674.17	ENST00000392649.7	2326	12	31870	6735	-7925	-6086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAGGGGACCTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	33047153	33010893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33010966_33012894_33013012_33047054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016033	chr3	-	269	3	ISM	ENSMUSG00000027674.17	ENST00000392649.7	2326	12	20473	8778	-19322	-8129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAGCTCAGAACCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	33058550	33012936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33013012_33047054_33047151_33058452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016034	chr3	-	320	3	ISM	ENSMUSG00000027674.17	ENST00000392649.7	2326	12	18828	42896	18828	-42247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAACTCTTTAAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33060195	33047054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33047151_33058452_33058550_33060068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016035	chr3	-	212	2	ISM	ENSMUSG00000027674.17	ENST00000392649.7	2326	12	9824	55908	9824	-55259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCCTGATGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	33069199	33060066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33060193_33069113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016036	chr3	-	322	2	ISM	ENSMUSG00000027674.17	ENST00000476138.5	2314	15	75686	55515	17557	-55259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCCTGATGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	33061466	33060066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33060193_33061270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016037	chr3	-	414	3	ISM	ENSMUSG00000027674.17	ENST00000476138.5	2314	15	58201	56719	72	-56463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCAAAGGTTTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	33078951	33061270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33061466_33069113_33069226_33078844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016038	chr3	-	183	2	ISM	ENSMUSG00000027674.17	ENST00000464614.5	1830	14	2348	74117	1530	-74033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGACCCATAGGGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	33134687	33078840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_33078950_33134613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016039	chr3	+	232	2	ISM	ENSMUSG00000027677.18	ENSMUST00000196975.5	1711	9	67	6417	67	-6417	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTAGTCTGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	33854478	33855229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_33854586_33855104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016040	chr3	+	238	2	ISM	ENSMUSG00000027677.18	ENSMUST00000196975.5	1711	9	728	6159	728	-6159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTTTAGGAAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	33855139	33855487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_33855230_33855339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016041	chr3	+	605	5	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	25932	19889	25922	-19889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTCTGCTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34100178	34103472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016042	chr3	+	157	2	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	29115	19092	29105	-19092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATTCAAGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	34103361	34104269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34103473_34104223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016043	chr3	+	128	2	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	34126	12863	34116	-12863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGGCACTAAAGAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	34108372	34110498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34108481_34110478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016044	chr3	+	139	2	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	36240	11129	36230	-11129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTTTCAGACCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	34110486	34112232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34110566_34112172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016045	chr3	+	809	5	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	37939	0	37929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAAGGGGAGGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	34112185	34123361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016046	chr3	+	161	2	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	44137	1099	44137	-966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGTAAGGAGAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	34118393	34122395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34118469_34122309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016047	chr3	+	194	2	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	48051	329	48051	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAAAAGACTAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	34122307	34123165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34122402_34123065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016048	chr3	+	157	1	ISM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	49082	976	49082	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTTTGTTTTCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	34123338	34123495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_34123300_34123500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016049	chr3	+	442	1	Genic_Genomic	ENSMUSG00000027680.16	novel	NA	NA	NA	NA	49774	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAGCAGTTTTTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	34124030	34124472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_34124000_34124500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016050	chr3	-	656	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCATTGCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	34135467	34131427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016051	chr3	+	500	2	ISM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	95299	804	95299	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATATCAAGGTAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	35903581	35909621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_35903714_35909253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016052	chr3	-	834	6	ISM	ENSMUSG00000027708.15	ENSMUST00000198389.5	3020	7	8886	2058	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTCAATTTCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	35975337	35949712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016053	chr3	-	782	6	FSM	ENSMUSG00000027708.15	ENST00000406773.1	775	6	0	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACCTTCTAGAATGTACA	NA	NA	NA	NA	NA	NA	NA	NA	35975337	35949761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_35949846_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016054	chr3	+	829	2	ISM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	20372	-650	20372	650	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATCCTAACTCCTCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	36144228	36145733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_36144304_36144979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016055	chr3	+	807	1	Genic_Genomic	ENSMUSG00000027710.15	novel	NA	NA	NA	NA	22342	3	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTTACCAAGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	36146198	36147005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_36146200_36147000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016056	chr3	+	524	1	ISM	ENSMUSG00000027713.7	ENSMUST00000029268.7	911	3	5839	0	5839	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGCATGTCTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	36535924	36536448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_36535900_36536400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016057	chr3	+	713	4	ISM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	9409	0	9409	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGAGCCGAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	36616163	36619876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_36616314_36617221_36617407_36619366_36619446_36619577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016058	chr3	-	1429	1	Genic_Genomic	ENSMUSG00000027715.10	novel	NA	NA	NA	NA	5262	4	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGGCTGTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36620438	36619009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_36619000_36620400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016059	chr3	-	1998	5	ISM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	3395	44	2796	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATATATGTGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	36622904	36619057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016060	chr3	+	2318	2	FSM	ENSMUSG00000051444.10	ENST00000542236.5	2311	2	-7	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACTATAGGATATACA	NA	NA	NA	NA	NA	NA	NA	NA	37373189	37375657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_37375339_37375488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016061	chr3	+	2303	2	NNC	ENSMUSG00000051444.10	novel	2311	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACTATAGGATATACA	NA	NA	NA	NA	NA	NA	NA	NA	37373199	37375657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_37375339_37375493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016062	chr3	+	2295	2	NNC	ENSMUSG00000051444.10	novel	2311	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACTATAGGATATACA	NA	NA	NA	NA	NA	NA	NA	NA	37373209	37375657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_37375341_37375493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016063	chr3	-	348	1	ISM	ENSMUSG00000050174.16	ENSMUST00000108118.9	935	4	14249	74	14249	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTAGCTCTAATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	37459480	37459132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_37459100_37459500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016064	chr3	+	397	3	ISM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	19014	127243	19014	-127243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGTTGGTGTTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	37493474	37506002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_37493506_37502556_37502712_37505791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016065	chr3	+	399	3	ISM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	107844	150	107844	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTCTAGAGAAAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	37582304	37633095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_37582472_37584131_37584169_37632900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016066	chr3	+	347	1	NIC	ENSMUSG00000027722.15	novel	3295	16	NA	NA	158438	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	37632898	37633245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_37632900_37633200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016067	chr3	+	426	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATAAAATTTGACAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	37768888	37769314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_37768900_37769300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016068	chr3	-	645	1	ISM	ENSMUSG00000044864.17	ENSMUST00000120875.8	4945	4	34598	343	5311	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGTAAGATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38504395	38503750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_38503800_38504400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016069	chr3	-	1127	2	FSM	ENSMUSG00000044864.17	ENSMUST00000094300.4	1944	2	979	-162	979	162	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGGCTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	38508727	38506065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_38506655_38508189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016070	chr3	-	809	2	ISM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	20842	7376	-7544	-4900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCACAAGAATTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	38517250	38511127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_38511735_38517048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016071	chr3	-	817	2	ISM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	665	13298	665	-10822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGTGTTGTGTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	38537427	38517049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_38517279_38536839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016072	chr3	+	667	1	NIC	ENSMUSG00000060798.8	novel	6387	16	NA	NA	13465	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCACTTGAGAACACC	NA	NA	NA	NA	NA	NA	NA	NA	40608380	40609047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_40608400_40609000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016073	chr3	+	286	2	ISM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	127	45374	127	-38855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTGTTAGTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	40699988	40705164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_40700217_40705106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016074	chr3	+	468	3	ISM	ENSMUSG00000025757.14	ENSMUST00000108086.7	2744	19	14498	22540	14498	-22540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAACAGGTACCATCACG	NA	NA	NA	NA	NA	NA	NA	NA	40714797	40721479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_40714896_40715213_40715348_40721243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016075	chr3	+	301	2	ISM	ENSMUSG00000025757.14	ENSMUST00000108086.7	2744	19	24642	16875	24642	-16875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCTAAGAGTGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	40724941	40727144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_40725077_40726978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016076	chr3	+	275	3	ISM	ENSMUSG00000025757.14	ENSMUST00000108086.7	2744	19	38359	4270	38359	-4270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAGACCAAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	40738658	40739749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_40738787_40739051_40739160_40739710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016077	chr3	+	332	2	ISM	ENSMUSG00000025757.14	ENSMUST00000108086.7	2744	19	40876	194	40876	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGTTATCCAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	40741175	40743825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_40741318_40743635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016078	chr3	+	319	1	ISM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	50358	0	49920	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTTTGCACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	40750219	40750538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_40750200_40750500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016079	chr3	+	821	2	ISM	ENSMUSG00000025758.11	ENSMUST00000167556.7	2769	16	1766	10642	1766	-10642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCGATACCTGCGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	40756454	40760210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_40756508_40759442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016080	chr3	+	1087	3	ISM	ENSMUSG00000025758.11	ENSMUST00000203295.3	3363	16	5151	7867	4951	-7401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTTACCAGAAACCTACC	NA	NA	NA	NA	NA	NA	NA	NA	40759639	40763451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_40760356_40760921_40761023_40763181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016081	chr3	-	1618	1	NIC	ENSMUSG00000025759.12	novel	3151	12	NA	NA	15688	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATATGAAGAGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	40774158	40772540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_40772500_40774200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016082	chr3	-	2086	4	ISM	ENSMUSG00000025759.12	ENST00000641147.1	1046	6	11450	-1392	11450	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTCATATTTCCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	40778396	40772556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016083	chr3	-	634	5	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	11394	4367	0	2980	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGAGTTGAGGCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	40789846	40778315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40789603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016084	chr3	-	534	4	FSM	ENSMUSG00000025759.12	ENST00000641134.1	535	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTACTTAAATCACAT	NA	NA	NA	NA	NA	NA	NA	NA	40789845	40781295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_40781418_40785058_40785115_40788378_40788493_40789603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016085	chr3	-	527	4	NIC	ENSMUSG00000025759.12	novel	678	5	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTACTTAAATCACAT	NA	NA	NA	NA	NA	NA	NA	NA	40789840	40781295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_40781418_40785058_40785113_40788378_40788493_40789603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016086	chr3	-	676	5	FSM	ENSMUSG00000025759.12	ENST00000641695.1	678	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTACTTAAATCACAT	NA	NA	NA	NA	NA	NA	NA	NA	40789844	40781295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_40781418_40785058_40785113_40786447_40786593_40788378_40788493_40789603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016087	chr3	-	365	4	NNC	ENSMUSG00000025759.12	novel	678	5	NA	NA	1422	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTACTTAAATCACAT	NA	NA	NA	NA	NA	NA	NA	NA	40788424	40781295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_40781418_40785058_40785111_40786447_40786593_40788378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016088	chr3	-	665	6	ISM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	7302	7380	-4092	-33	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGCTGTTTATGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	40793938	40781328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_40781418_40785058_40785115_40786447_40786593_40789603_40789845_40791523_40791568_40793848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016089	chr3	-	1107	1	FSM	ENSMUSG00000107524.2	ENSMUST00000203819.2	1106	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40819489	40818382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_40818400_40819500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016090	chr3	+	860	3	ISM	ENSMUSG00000025764.15	ENSMUST00000170711.8	2896	11	41149	430	39836	-430	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCTGGCACCAGGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	41559190	41568063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_41559427_41564237_41564356_41567557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016091	chr3	-	268	1	ISM	ENSMUSG00000037892.14	ENSMUST00000035931.13	5168	4	12633	1120	12599	5	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTACCTTATATTT	NA	NA	NA	NA	NA	NA	NA	NA	49699132	49698864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_49698900_49699100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016092	chr3	-	386	2	ISM	ENSMUSG00000037892.14	ENST00000510305.5	1486	5	3832	635	3832	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGACTCCCCTAGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	49707899	49699504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_49699724_49707732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016093	chr3	-	249	2	ISM	ENSMUSG00000037892.14	ENST00000510305.5	1486	5	3652	8869	3652	-8869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGGTAAGAGGGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	49708079	49707738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_49707897_49707988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016094	chr3	-	415	3	ISM	ENSMUSG00000037892.14	ENST00000510305.5	1486	5	25	9147	25	-9147	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAACAAATATTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	49711706	49708016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_49708078_49708826_49708956_49711481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016095	chr3	+	1536	2	FSM	ENSMUSG00000023087.16	ENSMUST00000144826.2	9797	2	7643	618	7643	-618	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAAAATTAAAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	51155269	51158427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_51155496_51157117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016096	chr3	+	1494	1	ISM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	25704	0	9945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTCTAAAAGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	51157571	51159065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_51157600_51159100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016097	chr3	-	701	1	ISM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	84733	2510	21438	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	51163351	51162650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_51162600_51163400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016098	chr3	-	907	2	ISM	ENSMUSG00000037174.19	ENSMUST00000091144.11	2366	6	19683	724	19636	-702	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTAGTGACGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	51165153	51163807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_51164407_51164845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016099	chr3	+	644	1	FSM	ENSMUSG00000087440.3	ENSMUST00000139771.3	1625	1	983	-2	983	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGGGTTACAGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	51185162	51185806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_51185200_51185800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016100	chr3	-	749	1	Genic_Genomic	ENSMUSG00000037161.15	novel	NA	NA	NA	NA	7367	1	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTAGTCTTTCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	51296580	51295831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_51295800_51296600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016101	chr3	-	1241	4	FSM	ENSMUSG00000037152.12	ENSMUST00000193279.2	315	4	-15	-911	9	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGAACCTTTAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	51316400	51312091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_51313036_51314756_51314834_51315565_51315670_51316284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016102	chr3	-	1252	4	NNC	ENSMUSG00000037152.12	novel	315	4	NA	NA	2	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGAACCTTTAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	51316407	51312091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_51313036_51314752_51314834_51315565_51315670_51316284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016103	chr3	-	1252	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGTGGAACCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	51316410	51312095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016104	chr3	-	1222	4	NNC	ENSMUSG00000037152.12	novel	1249	4	NA	NA	-5	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGTGGAACCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	51316390	51312095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_51313041_51314756_51314834_51315575_51315670_51316284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016105	chr3	+	198	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	502	2792	502	-2792	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTATGACATGACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	51391888	51400861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_51392002_51400776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016106	chr3	-	636	1	ISM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	44922	3	44922	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTGTTGTCAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	51423378	51422742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_51422700_51423400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016107	chr3	+	465	4	ISM	ENSMUSG00000074604.10	ENSMUST00000099106.10	603	5	3342	0	3296	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTGTGGCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51571941	51590096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_51572032_51584985_51585057_51589217_51589300_51589874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016108	chr3	+	224	1	NIC	ENSMUSG00000074604.10	novel	603	5	NA	NA	21227	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTGTGGCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51589872	51590096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_51589900_51590100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016109	chr3	-	673	6	ISM	ENSMUSG00000027742.14	ENST00000455146.8	1823	18	22061	0	22061	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCGATGGCATTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	52900974	52890463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016110	chr3	+	2091	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGAGTCACCGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	52948965	53169100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016111	chr3	-	327	2	ISM	ENSMUSG00000042997.14	ENST00000379599.6	707	5	8797	0	8797	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCGTGGCACAGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	53361076	53359857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_53360071_53360962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016112	chr3	+	1541	2	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	11462	2909	11462	-2760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCGGTGCCCCCACGC	NA	NA	NA	NA	NA	NA	NA	NA	53383094	53386416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_53383123_53384903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016113	chr3	+	3038	3	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	13473	-12	13473	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACGATGCGCAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	53385105	53389337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_53386588_53386980_53387132_53387932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016114	chr3	-	582	1	FSM	ENSMUSG00000105879.2	ENSMUST00000198872.2	457	1	-39	-86	-39	86	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATAGAAGAGTCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	53600338	53599756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_53599800_53600300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016115	chr3	-	1093	1	ISM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	9362	0	9298	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACAGTTGATAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	53761889	53760796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_53760800_53761900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016116	chr3	+	380	3	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	3288	21672	3288	-21137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTATCTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	54273334	54276736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54273390_54274921_54275080_54276569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016117	chr3	+	313	2	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	6523	20642	6523	-20107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAACCGTGGCAGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	54276569	54277766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54276735_54277618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016118	chr3	+	503	3	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	7571	18771	7571	-18236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGAGCCCAGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	54277617	54279637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54277766_54278251_54278394_54279424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016119	chr3	+	497	3	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	9380	17132	9380	-16597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGAATCAGACTCGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	54279426	54281276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54279638_54280190_54280326_54281125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016120	chr3	+	325	3	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	10154	15919	10154	-15384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTGCCATTCACATATT	NA	NA	NA	NA	NA	NA	NA	NA	54280200	54282489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54280326_54281125_54281275_54282438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016121	chr3	+	352	3	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	11145	14819	11145	-14284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGACCATGAATGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	54281191	54283589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54281275_54282438_54282576_54283457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016122	chr3	+	313	3	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	12467	14178	12467	-13643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAAGGAGTAAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	54282513	54284230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54282576_54283457_54283589_54284110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016123	chr3	+	324	3	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	13418	14008	13418	-13473	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACGTCGTGGACAAACT	NA	NA	NA	NA	NA	NA	NA	NA	54283464	54284400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54283589_54284110_54284242_54284331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016124	chr3	+	314	2	ISM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	26725	442	26725	93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAGAAAACTTCTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	54296771	54297966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_54296802_54297682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016125	chr3	+	311	1	Genic_Genomic	ENSMUSG00000027750.17	novel	NA	NA	NA	NA	28102	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTTCCTCAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	54298148	54298459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_54298100_54298500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016126	chr3	-	686	1	FSM	ENSMUSG00000069011.6	ENSMUST00000052888.9	867	1	169	12	169	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCGCTACTAAAGCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	54718502	54717816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_54717800_54718500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016127	chr3	+	756	3	ISM	ENSMUSG00000036580.16	ENSMUST00000117341.2	2957	8	5014	4777	5014	-4777	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAGGCAAGTTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55024821	55032338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55025217_55029020_55029219_55032175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016128	chr3	+	476	2	ISM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	16361	1495	16140	-1489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAATAATCAGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55035947	55043243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55036011_55042830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016129	chr3	+	904	1	ISM	ENSMUSG00000036580.16	ENSMUST00000117341.2	2957	8	16404	0	16404	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGGGGTGTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55036211	55037115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55036200_55037100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016130	chr3	+	455	1	ISM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	24760	0	24481	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	55044288	55044743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55044300_55044700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016131	chr3	+	238	2	ISM	ENSMUSG00000027797.16	ENSMUST00000167204.8	6025	7	108	224066	108	-224066	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAGCGCCCACTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	55150054	55154671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55150173_55154551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016132	chr3	+	203	2	ISM	ENSMUSG00000027797.16	ENSMUST00000167204.8	6025	7	4868	215382	4868	-215382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTCAGTGAACGTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55154814	55163355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55154948_55163285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016133	chr3	+	210	2	ISM	ENSMUSG00000027797.16	ENSMUST00000167204.8	6025	7	13558	90454	13558	-90454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCTAGATGAAAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	55163504	55288283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55163633_55288201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016134	chr3	+	215	2	ISM	ENSMUSG00000027797.16	ENSMUST00000167204.8	6025	7	138252	20238	-80950	-20238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGGTAAAGCCACTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	55288198	55358499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55288302_55358387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016135	chr3	+	199	2	ISM	ENSMUSG00000027797.16	ENSMUST00000199585.5	5196	3	1271	4644	1027	-4642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATTTCCTAAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	55370419	55374095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55370517_55373993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016136	chr3	+	165	1	ISM	ENSMUSG00000027797.16	ENSMUST00000167204.8	6025	7	228626	0	9180	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGTTGTTCAGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	55378572	55378737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_55378600_55378700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016137	chr3	-	677	4	NIC	ENSMUSG00000027799.13	novel	10986	58	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTCTTTGCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	55998527	55965370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_55965505_55966053_55966252_55992662_55992790_55998309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016138	chr3	-	360	1	Genic_Genomic	ENSMUSG00000027800.15	novel	NA	NA	NA	NA	8922	3	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGATAGTCTACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	57193388	57193028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_57193000_57193400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016139	chr3	-	646	3	ISM	ENSMUSG00000027800.15	ENSMUST00000171384.8	2855	5	1963	1842	1963	31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGATCTCCGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	57200347	57194873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_57195192_57197109_57197291_57200200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016140	chr3	-	710	4	ISM	ENSMUSG00000027800.15	ENSMUST00000171384.8	2855	5	-45	4108	-45	-2235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGGCTATTGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	57202355	57197139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_57197291_57200200_57200347_57200433_57200524_57202032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016141	chr3	-	630	3	ISM	ENSMUSG00000027800.15	ENSMUST00000196979.5	3372	7	3	9163	3	-7290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAAGATACATCGGATA	NA	NA	NA	NA	NA	NA	NA	NA	57209354	57202194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_57202504_57208942_57209058_57209148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016142	chr3	-	1331	1	ISM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	118849	0	118849	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCCTTTGTTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57364400	57363069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_57363100_57364400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016143	chr3	-	1383	2	ISM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	113277	2061	113195	-2061	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTAACACATACAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	57370054	57365263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_57366532_57369939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016144	chr3	-	1948	4	ISM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	211	920	211	-920	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTACAGAACATTCTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	57558925	57552689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016145	chr3	-	598	1	FSM	ENSMUSG00000104623.2	ENSMUST00000197077.2	477	1	-27	-94	-27	94	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATATAGTCTTGAACGA	NA	NA	NA	NA	NA	NA	NA	NA	57625737	57625139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_57625100_57625700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016146	chr3	+	803	2	ISM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	96901	1025	96843	974	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTCTCACTTTCATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57740383	57741627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_57740466_57740906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016147	chr3	+	751	1	ISM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	98419	0	98361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTTGTTGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57741901	57742652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_57741900_57742700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016148	chr3	-	1261	1	Genic_Genomic	ENSMUSG00000027805.17	novel	NA	NA	NA	NA	2215	1	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTCCTGTTTTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	57750575	57749314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_57749300_57750600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016149	chr3	-	1311	2	FSM	ENSMUSG00000027805.17	ENST00000481767.5	1311	2	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGATGAAATAAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	57752789	57749352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_57750469_57752594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016150	chr3	-	481	3	FSM	ENSMUSG00000027805.17	ENST00000490975.1	709	3	27	201	22	-51	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAAGTCTCCTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	57754948	57750579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_57750736_57752639_57752788_57754771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016151	chr3	-	218	2	ISM	ENSMUSG00000027805.17	ENSMUST00000122210.2	810	3	515	179	6	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCATGGAGGCGGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	57752784	57750707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_57750736_57752594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016152	chr3	+	1659	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	2600	400	2600	-400	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGCACTCTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	58324740	58368741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_58325035_58366751_58366804_58367428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016153	chr3	-	521	1	Genic_Genomic	ENSMUSG00000027808.9	novel	NA	NA	NA	NA	5556	1	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGGAACTGGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58427757	58427236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_58427200_58427800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016154	chr3	-	1027	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	5	3579	5	-3579	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCCATTATAGGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	58433308	58430816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_58431290_58432503_58432580_58432830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016155	chr3	+	819	3	ISM	ENSMUSG00000027810.15	ENST00000406576.7	1732	11	14154	8421	14154	-8421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGTAAGTAAGAAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	58452659	58456381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_58452794_58452920_58453038_58455813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016156	chr3	+	804	3	ISM	ENSMUSG00000027810.15	ENST00000406576.7	1732	11	17307	1730	17307	-1730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGGCTTGAATGAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	58455812	58463072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_58456386_58459989_58460104_58462955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016157	chr3	+	662	4	ISM	ENSMUSG00000075700.11	ENST00000485923.1	1019	6	1	2363	1	-2363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTGAGGAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58484131	58495954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_58484468_58492651_58492763_58493372_58493500_58495866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016158	chr3	+	481	4	ISM	ENSMUSG00000075700.11	ENST00000485923.1	1019	6	8520	576	8520	-576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGTTTAACAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	58492650	58497741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_58492763_58493372_58493500_58495866_58495955_58497587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016159	chr3	+	563	4	ISM	ENSMUSG00000075700.11	ENST00000485923.1	1019	6	9328	-78	9328	78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTTATAACTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	58493458	58498395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_58493500_58495866_58495955_58497587_58497742_58498115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016160	chr3	+	360	1	Genic_Genomic	ENSMUSG00000075700.11	novel	NA	NA	NA	NA	16066	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTTTGTGAAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	58500196	58500556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_58500200_58500600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016161	chr3	-	725	3	FSM	ENSMUSG00000043850.16	ENST00000328863.8	730	3	8	-3	8	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATATCTTCATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	58792453	58753603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_58753873_58772361_58772573_58792208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016162	chr3	+	532	1	FSM	ENSMUSG00000059776.8	ENSMUST00000079761.8	636	1	160	-56	160	56	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAGAGAGGAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	58894750	58895282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_58894800_58895300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016163	chr3	-	537	1	ISM	ENSMUSG00000036381.14	ENSMUST00000197841.2	2476	2	15373	998	15233	6	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTGTAGCACATCACA	NA	NA	NA	NA	NA	NA	NA	NA	59022810	59022273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_59022300_59022800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016164	chr3	-	665	2	FSM	ENSMUSG00000036381.14	ENST00000309170.8	1453	2	2	786	2	-713	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGTCGGTGAACTATAG	NA	NA	NA	NA	NA	NA	NA	NA	59060988	59023065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_59023551_59060808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016165	chr3	+	548	3	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	0	21284	0	-21284	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATAAAGAGTTGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	60437051	60511317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_60437226_60503014_60503186_60511114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016166	chr3	+	631	3	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	65962	11660	65962	-11660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGAGACAGCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	60503013	60520941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_60503186_60511114_60511316_60520683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016167	chr3	+	485	3	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	74132	2940	74132	-2940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTAATTTACAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	60511183	60529661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_60511316_60520683_60520942_60529566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016168	chr3	+	476	4	ISM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	83630	-1	83630	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTCGTCACAAAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	60520681	60532602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_60520942_60529566_60529662_60531399_60531463_60532544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016169	chr3	+	1712	2	FSM	ENSMUSG00000027694.10	ENST00000430836.1	443	2	-23	-1246	-12	1245	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTGTTGCAGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	60784422	60786253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_60784468_60784586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016170	chr3	+	438	1	Genic_Genomic	ENSMUSG00000027694.10	novel	NA	NA	NA	NA	128	3	mono-exon	FALSE	NA	NA	NA	NA	NA	1371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGGCCCCGGCCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	60784573	60785011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_60784600_60785000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016171	chr3	+	1252	1	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGACTACTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	60785026	60786278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_+_60785000_60786300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016172	chr3	+	555	1	FSM	ENSMUSG00000036894.4	ENSMUST00000049064.4	6793	1	6238	0	6238	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCTGAGTTGTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	61275296	61275851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_61275300_61275900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016173	chr3	-	319	1	ISM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	36605	2068	36471	1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACTTCTTGGTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	62377820	62377501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62377500_62377800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016174	chr3	-	574	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	34747	370	34747	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAGTTAGAAACTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	62379544	62377872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62378169_62378742_62378896_62379419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016175	chr3	-	356	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	34050	1251	34050	-1251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTAAGGTACTGATG	NA	NA	NA	NA	NA	NA	NA	NA	62380241	62378753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62378896_62379419_62379541_62380148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016176	chr3	-	308	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	33839	1923	33839	-1923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTGTAAGTGAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	62380452	62379425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62379541_62380148_62380240_62380350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016177	chr3	-	321	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	29197	2879	29197	-2879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAGATCCAAAAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	62385094	62380381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62380451_62382690_62382775_62384926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016178	chr3	-	358	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	27450	5189	27450	-5189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACTACCAAAAGATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	62386841	62382691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62382775_62384926_62385101_62386740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016179	chr3	-	344	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	25999	7423	25999	-7423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAGACAGAAACGGGG	NA	NA	NA	NA	NA	NA	NA	NA	62388292	62384925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62385101_62386740_62386840_62388222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016180	chr3	-	365	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	22592	9238	22592	-9238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTTTGTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62391699	62386740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62386840_62388222_62388341_62391551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016181	chr3	-	494	4	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	12974	18462	12974	-18462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTTTTAGTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	62401317	62395964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62396069_62396318_62396460_62399771_62399854_62401150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016182	chr3	-	316	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	11344	23647	11344	-23647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAAAGTTTGGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	62402947	62401149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62401318_62401760_62401840_62402878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016183	chr3	-	330	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	9969	24260	9969	-24260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATGTTTCAGTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	62404322	62401762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62401840_62402878_62402959_62404149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016184	chr3	-	380	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	5855	26659	5855	-26659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCCATTTCAGTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	62408436	62404161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62404321_62405510_62405550_62408254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016185	chr3	-	381	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	4770	28028	4770	-28028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATATGGAATGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	62409521	62405530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62405550_62408254_62408490_62409394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016186	chr3	-	374	3	ISM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	12	30879	12	-30879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATCATATATTGACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	62414279	62408381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_62408490_62409394_62409520_62414138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016187	chr3	-	974	1	ISM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	13815	0	13815	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTGAGATCACTC	NA	NA	NA	NA	NA	NA	NA	NA	63823078	63822104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_63822100_63823100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016188	chr3	-	966	2	NNC	ENSMUSG00000048581.13	novel	1640	5	NA	NA	9141	-224	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCTTCTGCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	63827752	63822328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_63823160_63827617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016189	chr3	-	2428	4	FSM	ENSMUSG00000027822.17	ENST00000646424.1	2656	4	169	59	-61	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGTTTTTTTTAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	63871854	63849828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_63850838_63851986_63852203_63855492_63855678_63870836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016190	chr3	+	380	2	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	8	42261	8	-42261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTCTGATTGATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	63883534	63887739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63883732_63887556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016191	chr3	+	306	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	6304	34829	6304	-34829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGCAGGTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	63889830	63895171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63889947_63893020_63893119_63895079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016192	chr3	+	346	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	9531	32244	9531	-32244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTTGGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	63893057	63897756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63893119_63895079_63895184_63897575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016193	chr3	+	342	2	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	14047	31917	14047	-31917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGGAATTCAAGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	63897573	63898083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63897770_63897937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016194	chr3	+	319	2	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	14410	29237	14410	-29237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTTCTTTTAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	63897936	63900763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63898104_63900611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016195	chr3	+	436	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	17083	25665	17083	-25665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACACACCTGGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	63900609	63904335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63900764_63901220_63901395_63904227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016196	chr3	+	348	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	22506	10907	22506	-10907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCCACAGGTGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	63906032	63919093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63906139_63908933_63909060_63918977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016197	chr3	+	339	3	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	35449	7065	35449	-7065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGTGGTTATTCGAACC	NA	NA	NA	NA	NA	NA	NA	NA	63918975	63922935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63919094_63921674_63921806_63922845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016198	chr3	+	436	2	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	39361	5642	39361	-5642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCCAAGTGCAGACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	63922887	63924358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63923019_63924053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016199	chr3	+	332	1	ISM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	46142	0	46142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCATCTTGTGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	63929668	63930000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_63929700_63930000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016200	chr3	-	1510	4	FSM	ENSMUSG00000043897.14	ENST00000449668.1	1510	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCTGTGAGCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	64044918	64023856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_64024836_64026176_64026294_64042073_64042195_64044625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016201	chr3	+	226	2	ISM	ENSMUSG00000027827.18	ENSMUST00000049230.11	3245	14	428	111684	428	-110345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACTCAGGGTGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	65017232	65173956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_65017414_65173911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016202	chr3	-	316	1	Genic_Genomic	ENSMUSG00000090120.2	novel	NA	NA	NA	NA	24342	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGCCTGGCTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	65232508	65232192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_65232200_65232500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016203	chr3	+	210	2	ISM	ENSMUSG00000027827.18	ENST00000389636.9	1289	12	89773	19814	89773	-19737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTCCACTATCACATCT	NA	NA	NA	NA	NA	NA	NA	NA	65263682	65264564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_65263771_65264442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016204	chr3	+	217	2	ISM	ENSMUSG00000027827.18	ENST00000389636.9	1289	12	91758	12235	91758	-12158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAACTACGAGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	65265667	65272143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_65265764_65272022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016205	chr3	+	227	2	ISM	ENSMUSG00000027827.18	ENST00000618897.4	3652	13	262483	1587	104877	-259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAACGGCCTTACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	65278786	65284042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_65278871_65283899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016206	chr3	+	214	1	ISM	ENSMUSG00000027827.18	ENST00000618897.4	3652	13	269112	0	111506	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAATCTCATAATACATC	NA	NA	NA	NA	NA	NA	NA	NA	65285415	65285629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_65285400_65285600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016207	chr3	-	949	1	Genic_Genomic	ENSMUSG00000027828.13	novel	NA	NA	NA	NA	11945	1	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTGTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65288023	65287074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_65287100_65288000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016208	chr3	-	1276	4	ISM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	1172	1462	1096	647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTGGGCTCTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	65298872	65288537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016209	chr3	-	949	2	NNC	ENSMUSG00000027828.13	novel	2957	5	NA	NA	9467	591	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGATTATTGACACATG	NA	NA	NA	NA	NA	NA	NA	NA	65290501	65288593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_65289456_65290414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016210	chr3	-	787	5	FSM	ENSMUSG00000027828.13	ENST00000476217.5	786	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGTACCAGGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	65299969	65289184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_65289456_65290398_65290545_65295152_65295252_65298745_65298873_65299825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016211	chr3	+	452	2	ISM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	3492	9143	3492	-9143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTACATGTTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65439322	65453796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_65439606_65453627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016212	chr3	+	412	2	ISM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	24188	2203	24188	-2203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGAAGTCCTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	65460018	65460736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_65460233_65460538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016213	chr3	+	364	1	Genic_Genomic	ENSMUSG00000034640.10	novel	NA	NA	NA	NA	26747	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCAGTGTAATGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	65462577	65462941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_65462600_65462900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016214	chr3	+	383	3	FSM	ENSMUSG00000074579.15	ENSMUST00000099075.4	2461	3	49	2029	9	-2029	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTTGGGTGGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	65573697	65591571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_65573733_65576510_65576600_65591312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016215	chr3	+	366	2	ISM	ENSMUSG00000074579.15	ENST00000483177.5	511	4	17636	0	17622	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATAGAGCGCTGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	65591310	65595810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_65591572_65595705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016216	chr3	-	238	1	ISM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	11861	0	11740	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	65853809	65853571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_65853600_65853800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016217	chr3	-	215	2	ISM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	10237	1540	10116	-1540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAAGGGGTCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	65855433	65855111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_65855211_65855317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016218	chr3	-	247	2	ISM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	9649	2111	9528	-2111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGATACATTCAGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	65856021	65855682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_65855825_65855916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016219	chr3	-	206	2	ISM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	9458	2345	9337	-2345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATCTCAGTTACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	65856212	65855916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_65856022_65856111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016220	chr3	-	247	3	ISM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	1310	4355	1189	-4355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAACCCTGGTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	65864360	65857926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_65857966_65858854_65858976_65864273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016221	chr3	-	553	4	FSM	ENSMUSG00000027829.16	ENST00000295925.5	567	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGGCAACAGTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65865535	65862636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_65862698_65864273_65864384_65864921_65864997_65865228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016222	chr3	-	1468	1	ISM	ENSMUSG00000027833.17	ENST00000483851.7	3283	5	8762	0	5265	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGGTGATATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	66880515	66879047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_66879000_66880500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016223	chr3	-	1581	2	NNC	ENSMUSG00000027833.17	novel	1537	4	NA	NA	2909	354	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGGCATCGTGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	66882871	66879758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_66881241_66882772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016224	chr3	+	1235	2	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	369594	1007	369594	830	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACCAGCACACGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	67262893	67264722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_67262960_67263553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016225	chr3	+	2063	1	ISM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	370367	0	370367	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGACTGCTTCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	67263666	67265729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_67263700_67265700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016226	chr3	+	1073	7	FSM	ENSMUSG00000048416.16	ENST00000359117.9	1078	7	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAATACACATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67281553	67307383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_67281627_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016227	chr3	+	722	4	ISM	ENSMUSG00000048416.16	ENST00000650753.1	917	6	18676	0	18676	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAATACACATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67300224	67307383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_67300309_67301267_67301397_67302584_67302745_67307034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016228	chr3	+	351	1	NIC	ENSMUSG00000048416.16	novel	1078	7	NA	NA	25484	0	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTAAAATACACATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67307032	67307383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_67307000_67307400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016229	chr3	-	193	1	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	5736	0	5736	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTCTAATTGCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	67365523	67365330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_67365300_67365500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016230	chr3	-	255	2	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	5269	139	5269	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTGTCACTCTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	67365990	67365469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_67365661_67365926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016231	chr3	-	362	3	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	2454	595	2454	-595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATATACAACTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	67368805	67365925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_67365990_67368254_67368392_67368644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016232	chr3	-	339	3	ISM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	208	3349	208	-3349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGAGACCGCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	67371051	67368679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_67368823_67369691_67369755_67370918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016233	chr3	+	1144	4	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	17199	618	15296	-618	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAACAGTTTGAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	67507272	67510952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_67507386_67507925_67507974_67508654_67508713_67510027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016234	chr3	+	973	1	ISM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	20524	0	18621	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGGATAAATGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	67510597	67511570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_67510600_67511600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016235	chr3	-	276	1	FSM	ENSMUSG00000103206.2	ENSMUST00000194852.2	576	1	283	17	283	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCCCTGAGGAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	67514831	67514555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_67514600_67514800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016236	chr3	-	403	2	Genic_Genomic	ENSMUSG00000103206.2	novel	576	1	NA	NA	13	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCCCTGAGGAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	67515101	67514555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_67514878_67515020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016237	chr3	+	1051	4	ISM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	1	4564	1	-4564	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGTCCACGTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	68401531	68523888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68401703_68401906_68402552_68503482_68503602_68523772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016238	chr3	+	768	2	ISM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	83	125867	73	-125867	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTAAGTTGGCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	68401613	68402585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68401703_68401906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016239	chr3	+	1143	5	ISM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	411	2426	35	-2426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGACCTCCACTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	68401941	68526026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016240	chr3	+	857	3	ISM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	423	9913	57	-4569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGGTAAGTCCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	68401963	68523883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68402591_68503482_68503602_68523772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016241	chr3	+	972	4	ISM	ENSMUSG00000027777.16	ENSMUST00000182997.3	1557	7	33534	0	33534	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	68525045	68533797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68525142_68525928_68526053_68528305_68528400_68533139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016242	chr3	+	660	1	NIC	ENSMUSG00000102422.2	novel	2369	11	NA	NA	733573	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	68533137	68533797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_68533100_68533800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016243	chr3	+	315	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	-77	28405	-77	-28405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGACAGGTCGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	68912246	68913546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68912424_68913408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016244	chr3	+	310	2	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	1337	27264	1084	-27259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAAGGTACTGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	68913407	68914692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68913547_68914521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016245	chr3	+	185	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	2318	26564	2318	-26564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGATGAACACAAGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	68914641	68915387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68914701_68915261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016246	chr3	+	313	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	2984	24968	2984	-24968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGCAGGTACGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	68915307	68916983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68915454_68916816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016247	chr3	+	279	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	4511	18406	4511	-18406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTCGGAGAGTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	68916834	68923545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68916994_68923425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016248	chr3	+	289	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	11106	17839	11106	-17839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTCTGCTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	68923429	68924112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68923591_68923984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016249	chr3	+	253	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	11674	16410	11674	-16410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAATAATCTCTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	68923997	68925541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68924113_68925403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016250	chr3	+	294	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	13080	15291	13080	-15291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATTAGAGGGAATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	68925403	68926660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68925545_68926507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016251	chr3	+	189	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	14204	13325	14204	-13325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAACAATTCGCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	68926527	68928626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68926659_68928568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016252	chr3	+	315	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	16252	12236	16252	-12236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTCTCAAGGAGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	68928575	68929715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68928734_68929558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016253	chr3	+	170	1	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	17552	12164	17299	-12159	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTACTTCTGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	68929622	68929792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68929600_68929800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016254	chr3	+	295	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	17299	10329	17299	-10329	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGATGCAATAATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	68929622	68931622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68929793_68931497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016255	chr3	+	312	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	19176	8667	19176	-8667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGATTGCAACTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	68931499	68933284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68931684_68933156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016256	chr3	+	245	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	20852	7024	20852	-7024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTGCTTTACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	68933175	68934927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68933319_68934825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016257	chr3	+	183	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	22627	6718	22627	-6718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGGTCCAAATAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	68934950	68935233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68935052_68935151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016258	chr3	+	192	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	22846	6044	22846	-6044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTCGCTGCAAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	68935169	68935907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68935232_68935777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016259	chr3	+	236	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	23452	5137	23452	-5137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACAGAAACTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	68935775	68936814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68935931_68936733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016260	chr3	+	251	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	24435	4227	24435	-4227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTACTAAGGCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	68936758	68937724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68936861_68937575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016261	chr3	+	292	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	25269	3092	25269	-3092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCATAAACAATACAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	68937592	68938859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68937766_68938740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016262	chr3	+	249	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	26415	2780	26415	-2780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTGAAACTTGAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	68938738	68939171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68938886_68939069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016263	chr3	+	283	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	26746	1803	26746	-1803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCACTTTTGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	68939069	68940148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68939244_68940039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016264	chr3	+	274	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	27747	1471	27747	-1471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGTAATAACAAATAAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	68940070	68940480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68940223_68940358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016265	chr3	+	311	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	28111	527	28111	-527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTCTATTGTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	68940434	68941424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68940592_68941270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016266	chr3	+	212	2	ISM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	29040	124	29040	-124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAAATTGCGTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	68941363	68941827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68941455_68941706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016267	chr3	+	192	1	ISM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	29694	0	29441	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	68941764	68941956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_68941800_68942000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016268	chr3	-	270	1	ISM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	9198	0	9198	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	68942890	68942620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_68942600_68942900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016269	chr3	-	239	2	ISM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	947	2523	947	-2523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTACTGGCATAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	68951141	68945143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_68945342_68951100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016270	chr3	-	985	1	Genic_Genomic	ENSMUSG00000043300.3	novel	NA	NA	NA	NA	23909	5	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAAGGCTGAGACGGTC	NA	NA	NA	NA	NA	NA	NA	NA	69482384	69481399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_69481400_69482400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016271	chr3	-	1122	2	ISM	ENSMUSG00000043300.3	ENST00000417187.2	1139	3	72856	-4	22991	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGAAGGCTGAGACGGT	NA	NA	NA	NA	NA	NA	NA	NA	69483302	69481400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_69482379_69483158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016272	chr3	-	1007	3	FSM	ENSMUSG00000043300.3	ENST00000417187.2	1139	3	-1	133	-1	-47	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAGCAAGAAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	69556159	69481537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_69482379_69483158_69483294_69556128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016273	chr3	-	238	2	ISM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	19567	1633	19567	-1633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAACTGGATGTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	69486726	69483123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_69483294_69486658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016274	chr3	+	516	1	Genic_Genomic	ENSMUSG00000027787.15	novel	NA	NA	NA	NA	33874	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGTCTGGTTGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	69663191	69663707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_69663200_69663700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016275	chr3	-	227	1	Genic_Genomic	ENSMUSG00000103396.2	novel	NA	NA	NA	NA	375	32	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAATGATACAGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	71372620	71372393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_71372400_71372600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016276	chr3	-	381	2	FSM	ENSMUSG00000103396.2	ENST00000649813.2	349	2	-1	-31	-1	31	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTAATGATACAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	71372996	71372394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_71372621_71372841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016277	chr3	-	1052	1	ISM	ENSMUSG00000034109.16	ENSMUST00000038563.14	5546	15	80794	0	80794	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTCTTTCTAAATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	75783442	75782390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_75782400_75783400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016278	chr3	-	1049	1	ISM	ENSMUSG00000034109.16	ENSMUST00000038563.14	5546	15	79699	1098	79699	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGAATATTTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75784537	75783488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_75783500_75784500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016279	chr3	+	1197	6	NNC	ENSMUSG00000034098.15	novel	2938	15	NA	NA	517886	-121	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGATGACACCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	76500775	76615363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_76500885_76536219_76536343_76555582_76555733_76566965_76567074_76569064_76569190_76614781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016280	chr3	+	591	1	FSM	ENSMUSG00000070443.7	ENSMUST00000094175.7	999	1	415	-7	415	7	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGACCACCCACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	78824979	78825570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_78825000_78825600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016281	chr3	-	1481	1	Genic_Genomic	ENSMUSG00000062232.15	novel	NA	NA	NA	NA	80995	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGCTTTTTACTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	78971289	78969808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_78969800_78971300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016282	chr3	-	2031	3	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	75608	796	75608	-781	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGCTGACCTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78976676	78970618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_78971869_78973879_78974180_78976195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016283	chr3	-	599	2	ISM	ENSMUSG00000062232.15	ENSMUST00000118100.8	6573	24	58847	20892	58847	-20877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGCAGGTGGGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	78993437	78990714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_78990928_78993051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016284	chr3	+	608	4	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	7	5792	7	-5792	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACCTGCCAAAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	79498678	79505165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016285	chr3	+	387	3	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	3871	4734	3871	-4734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACTTCCTGATGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	79502542	79506223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_79502616_79504991_79505181_79506098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016286	chr3	+	422	3	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	6321	4488	6321	-4488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCATTTTAACAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79504992	79506469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_79505181_79506098_79506222_79506358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016287	chr3	+	360	3	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	7440	3250	7440	-3250	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTGTGTGAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79506111	79507707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_79506222_79506358_79506466_79507564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016288	chr3	+	709	5	ISM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	7687	290	7687	-290	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGCTTTGTGGATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	79506358	79510667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016289	chr3	+	360	1	Genic_Genomic	ENSMUSG00000027804.14	novel	NA	NA	NA	NA	11927	1	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGATGTCCTTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	79510598	79510958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_79510600_79511000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016290	chr3	-	721	3	ISM	ENSMUSG00000027809.15	ENSMUST00000120992.8	2233	13	22948	-16	22909	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTTCAAGTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	79513056	79511093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_79511473_79512211_79512434_79512936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016291	chr3	-	675	4	ISM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	22967	0	22875	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAGGAGGAGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	79513090	79511348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_79511473_79511584_79511756_79512207_79512434_79512936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016292	chr3	+	1972	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTTTCTTTAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	79536383	79540127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_79536664_79538435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016293	chr3	-	1165	4	ISM	ENSMUSG00000034009.15	ENST00000460056.6	2221	17	53303	0	53303	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTAGTCTCAAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	79559704	79552019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016294	chr3	+	1732	3	ISM	ENSMUSG00000027955.17	ENST00000296530.12	2280	5	-1	32813	-1	-32813	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTATCCAATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	79792159	79816110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_79792534_79793294_79794438_79815895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016295	chr3	+	1465	2	NNC	ENSMUSG00000027955.17	novel	2280	5	NA	NA	37	-54498	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCATCCAAGGTAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	79792197	79794425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_79792532_79793294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016296	chr3	+	1858	4	FSM	ENSMUSG00000027955.17	ENSMUST00000029567.9	6627	4	107	4662	107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACGCAGTTTATATCATG	NA	NA	NA	NA	NA	NA	NA	NA	79793343	79848923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_79794438_79815895_79816111_79843901_79844129_79848601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016297	chr3	-	1431	1	Genic_Genomic	ENSMUSG00000028020.17	novel	NA	NA	NA	NA	67061	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTTTACTGCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	80752335	80750904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_80750900_80752300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016298	chr3	-	1572	2	ISM	ENSMUSG00000028020.17	ENSMUST00000194085.6	1341	8	60939	-1032	60939	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTTAGTTAATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	80758457	80751235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_80752565_80758214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016299	chr3	+	2888	7	FSM	ENSMUSG00000028019.10	ENST00000502773.6	2897	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTAAGTGTTCGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	80944287	81121338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768_81119882_81119940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016300	chr3	+	1765	2	ISM	ENSMUSG00000028019.10	ENST00000502773.6	2897	7	172104	-9	172104	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCGTCTAAGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	81116382	81121347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_81116569_81119768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016301	chr3	+	1581	1	NIC	ENSMUSG00000028019.10	novel	3521	6	NA	NA	175488	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCGTCTAAGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	81119766	81121347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_81119800_81121300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016302	chr3	+	741	5	ISM	ENSMUSG00000028015.4	ENST00000680553.1	842	6	660	-4	660	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATGACAGACTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	81849497	81859656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_81849640_81852168_81852337_81853626_81853743_81858679_81858844_81859505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016303	chr3	+	1514	2	ISM	ENSMUSG00000028015.4	ENSMUST00000029649.3	3468	8	19596	1081	10666	-1081	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACATTTTCTTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	81859503	81862951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_81859599_81861532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016304	chr3	-	743	1	ISM	ENSMUSG00000028005.14	ENSMUST00000029635.14	3223	14	41903	34	41290	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCGCATTAATTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	81940089	81939346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_81939300_81940100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016305	chr3	-	904	3	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	39261	533	39261	-530	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACATTGCCCTAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	81942118	81939881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_81940589_81941618_81941746_81942048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016306	chr3	-	685	4	ISM	ENSMUSG00000028005.14	ENST00000503520.5	1736	12	28433	5420	28433	-5420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACGTAAGCAAGGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	81952946	81947037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_81947231_81950426_81950561_81951435_81951553_81952705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016307	chr3	+	148	1	ISM	ENSMUSG00000033900.14	ENSMUST00000091014.10	6218	14	37049	0	36934	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTAACTGACGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	82302427	82302575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_82302400_82302600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016308	chr3	+	264	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	24	4428	24	-4116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATAGCCTCTGTCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	82917395	82917896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_82917502_82917738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016309	chr3	+	235	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	365	3598	365	-3286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCACAGAGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	82917736	82918726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_82917897_82918651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016310	chr3	+	363	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	1278	2078	1278	-1766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGACAACGATAAGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	82918649	82920246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_82918837_82920070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016311	chr3	+	253	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	2853	751	2853	-439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGGAGAAGGACAGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	82920224	82921573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_82920349_82921444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016312	chr3	+	356	2	ISM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	4071	-1	4071	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGCATTGCAATAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	82921442	82922325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_82921615_82922141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016313	chr3	+	187	1	NIC	ENSMUSG00000033860.14	novel	1695	10	NA	NA	4768	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCATTGCAATAAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	82922139	82922326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_82922100_82922300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016314	chr3	+	1981	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTCTGTCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	83673649	83681623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_83674351_83676632_83676714_83680424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016315	chr3	+	452	4	FSM	ENSMUSG00000104082.3	ENST00000347063.9	451	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATCGTTCTAGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	83722780	83737192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_83722886_83726856_83726971_83730529_83730664_83737093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016316	chr3	+	270	3	NNC	ENSMUSG00000104082.3	novel	451	4	NA	NA	75	-6528	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTCCCACGGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	83722855	83730663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_83722886_83726856_83726971_83730537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016317	chr3	+	254	2	ISM	ENSMUSG00000104082.3	ENST00000347063.9	451	4	4067	6531	4067	-6531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATCCTTCCCACGGAA	NA	NA	NA	NA	NA	NA	NA	NA	83726847	83730660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_83726971_83730529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016318	chr3	+	269	3	NNC	ENSMUSG00000104082.3	novel	451	4	NA	NA	4087	-58	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGACTTGCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	83726867	83737133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_83726971_83730537_83730664_83737093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016319	chr3	+	198	2	NNC	ENSMUSG00000104082.3	novel	451	4	NA	NA	7773	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATCGTTCTAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	83730553	83737191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_83730654_83737093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016320	chr3	+	98	1	NIC	ENSMUSG00000104082.3	novel	948	7	NA	NA	14313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATCGTTCTAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	83737093	83737191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_83737100_83737200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016321	chr3	-	1474	6	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	20575	8068	20575	0	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGTTGTAAATAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	84099570	84078711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016322	chr3	-	1392	6	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	19535	9465	19535	-1397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTAGCCGAGGAAACGG	NA	NA	NA	NA	NA	NA	NA	NA	84100610	84080108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016323	chr3	-	1350	5	ISM	ENSMUSG00000027993.17	ENSMUST00000065380.13	4296	12	4425	14789	4425	-6721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACAAGTGGAAAGATATT	NA	NA	NA	NA	NA	NA	NA	NA	84115720	84085432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016324	chr3	-	539	1	ISM	ENSMUSG00000074513.10	ENST00000451320.6	2968	9	86109	0	85908	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAGGATGTACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84403884	84403345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_84403300_84403900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016325	chr3	-	850	3	ISM	ENSMUSG00000074513.10	ENSMUST00000107687.9	1714	9	66695	171	66695	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAGGGAGGTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	84423097	84404681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_84405199_84417114_84417290_84422939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016326	chr3	+	634	2	FSM	ENSMUSG00000028086.16	ENST00000604872.6	629	2	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTCCCCTTCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	84810231	84811394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_84810279_84810807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016327	chr3	+	591	1	NIC	ENSMUSG00000028086.16	novel	5217	13	NA	NA	568	1	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTCCCCTTCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	84810803	84811394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_84810800_84811400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016328	chr3	-	293	1	ISM	ENSMUSG00000031286.7	ENSMUST00000033643.6	2732	2	17375	0	17375	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGTCTAAAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	85777448	85777155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_85777200_85777400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016329	chr3	-	397	2	FSM	ENSMUSG00000031286.7	ENSMUST00000033643.6	2732	2	78	2257	78	-2257	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGCCCACGATAGCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	85794745	85779412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_85779498_85794433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016330	chr3	-	787	5	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	899	-3	899	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCCATTGATTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86049110	86045243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016331	chr3	-	572	4	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	1378	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	86048631	86045246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_86045418_86045789_86045892_86046342_86046556_86048545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016332	chr3	-	497	3	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	1276	-545	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGTGGGAAATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	86048733	86045791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_86045888_86046342_86046556_86048545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016333	chr3	-	763	5	ISM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	-1	587	-1	-587	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTGTTAGAAAAGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86050010	86045833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016334	chr3	-	690	4	NNC	ENSMUSG00000028081.7	novel	977	6	NA	NA	5	-1099	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGCGTTTCTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86050004	86046345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_86046556_86048545_86048734_86049004_86049109_86049816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016335	chr3	-	525	1	FSM	ENSMUSG00000094392.2	ENSMUST00000119949.3	136	1	-75	-314	-75	314	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACCAAAGAGCACTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	86579550	86579025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_86579000_86579600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016336	chr3	+	515	1	Antisense	novelGene_ENSMUSG00000094392.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTTTTTTCTTAACCA	NA	NA	NA	NA	NA	NA	NA	NA	86579035	86579550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_+_86579000_86579600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016337	chr3	+	518	2	FSM	ENSMUSG00000041750.14	ENST00000368168.4	515	2	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATTGCATATTATATCA	NA	NA	NA	NA	NA	NA	NA	NA	86895584	86899224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_86896031_86899152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016338	chr3	-	2036	1	ISM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	94069	3	93919	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCATGTTCTGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	86987938	86985902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_86985900_86987900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016339	chr3	+	1016	4	FSM	ENSMUSG00000118505.2	ENST00000454449.3	1013	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGGGGTGGCTCTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	87462220	87467884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_87462456_87462655_87462843_87463265_87463378_87467402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016340	chr3	+	1010	4	NNC	ENSMUSG00000118505.2	novel	1013	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAAGGGGTGGCTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87462220	87467883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_87462456_87462655_87462838_87463265_87463378_87467402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016341	chr3	-	104	1	NIC	ENSMUSG00000023084.12	novel	3988	15	NA	NA	6841	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTACCTAGGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	87646498	87646394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_87646400_87646500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016342	chr3	-	200	2	ISM	ENSMUSG00000023084.12	ENST00000337428.8	1502	14	6573	9	6573	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGCTGCAGCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	87646766	87646403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87646493_87646655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016343	chr3	-	297	3	ISM	ENSMUSG00000023084.12	ENST00000337428.8	1502	14	4502	743	4502	-743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGCTAGCCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87648837	87647137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87647251_87648281_87648371_87648742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016344	chr3	-	203	3	ISM	ENSMUSG00000023084.12	ENST00000337428.8	1502	14	3163	2747	3163	-2747	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAACGTGAGAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87650176	87649141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87649171_87649930_87650021_87650092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016345	chr3	-	209	2	ISM	ENSMUSG00000023084.12	ENST00000337428.8	1502	14	2967	3696	2967	-3696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGCACGTTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	87650372	87650090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87650177_87650249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016346	chr3	-	188	3	ISM	ENSMUSG00000023084.12	ENST00000337428.8	1502	14	506	4241	506	-4241	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCCTTTAGTAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	87652833	87650635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87650668_87652529_87652608_87652755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016347	chr3	-	201	2	ISM	ENSMUSG00000023084.12	ENST00000337428.8	1502	14	75	6585	75	-6585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGTGATGATCTGATCCG	NA	NA	NA	NA	NA	NA	NA	NA	87653264	87652979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87653105_87653188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016348	chr3	-	359	1	NIC	ENSMUSG00000028072.7	novel	2588	17	NA	NA	16560	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCTCTTGGCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	87685909	87685550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_87685600_87685900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016349	chr3	-	764	3	ISM	ENSMUSG00000028072.7	ENSMUST00000029712.5	2588	17	14842	1	14842	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCTCTTGGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	87687627	87685551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87685907_87686942_87687102_87687377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016350	chr3	+	417	2	Antisense	novelGene_ENSMUSG00000028072.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGTCCGACCTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	87685618	87687081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_+_87685890_87686935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016351	chr3	-	576	3	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	13577	1222	13557	-1222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCTCTGTCTTAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	87688912	87686941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87687102_87687377_87687619_87688737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016352	chr3	-	694	4	ISM	ENSMUSG00000028072.7	ENSMUST00000029712.5	2588	17	12865	1825	12865	-1656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCCCTAAACCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87689604	87687375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87687619_87688737_87688911_87689047_87689179_87689457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016353	chr3	-	570	5	ISM	ENSMUSG00000028072.7	ENSMUST00000029712.5	2588	17	12032	3228	12032	-3059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTACATGCGCCACGG	NA	NA	NA	NA	NA	NA	NA	NA	87690437	87688778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87688911_87689047_87689179_87689457_87689605_87690031_87690135_87690380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016354	chr3	-	174	2	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	13297	3162	13277	-3162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGACTTTCAGCGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	87689192	87688881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87688911_87689047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016355	chr3	-	168	2	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	12933	3404	12913	-3404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGGAAAGGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	87689556	87689123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87689193_87689457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016356	chr3	-	638	4	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	11183	3736	11163	-3736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAACTGTTATAGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	87691306	87689455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87689605_87690031_87690135_87690380_87690437_87690976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016357	chr3	-	523	3	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	9080	4659	9060	-4659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGGGGTATGGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	87693409	87690378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87690437_87690976_87691307_87693274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016358	chr3	-	422	2	NNC	ENSMUSG00000028072.7	novel	2670	16	NA	NA	9090	-5264	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGGTGTGAGAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	87693379	87690983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_87691301_87693274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016359	chr3	-	697	4	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	6409	5318	6389	-5318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTCATGGCTGCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	87696080	87691037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87691307_87693274_87693408_87695623_87695767_87695928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016360	chr3	-	434	4	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	5500	7615	5480	-7615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCTGGGCAGAGAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	87696989	87693334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87693408_87695623_87695767_87695928_87696081_87696923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016361	chr3	-	433	4	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	3740	9904	3720	-9904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAGCCTCACAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	87698749	87695623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87695767_87695928_87696081_87696923_87696993_87698680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016362	chr3	-	437	5	ISM	ENSMUSG00000028072.7	ENST00000674537.1	2371	16	35	10305	35	-10214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTAGGTGTTGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	87721239	87695933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87696081_87696923_87696993_87698680_87698753_87698976_87699052_87721165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016363	chr3	-	625	5	ISM	ENSMUSG00000028072.7	ENST00000358660.3	2435	16	-76	10278	5	-10278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACAGACGCTTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	87702565	87695997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_87696081_87696923_87696993_87698680_87698753_87698976_87699052_87702239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016364	chr3	+	811	5	ISM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	4	1641	4	-1634	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTCAGGAGACCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	87813631	87821798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016365	chr3	+	1305	4	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	6854	462	6854	-462	intron_retention	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTTTTTTTTAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	87820619	87822970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87820759_87821358_87821545_87821779_87821998_87822208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016366	chr3	+	1463	4	ISM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	7655	-1	7655	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATTCTGACTAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	87821420	87823433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87821545_87821779_87821998_87822208_87822453_87822556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016367	chr3	+	783	2	NNC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	8012	-654	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTTCCAAGTTTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	87821777	87822778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_87821998_87822215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016368	chr3	+	1126	2	NNC	ENSMUSG00000004897.17	novel	1996	7	NA	NA	8441	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATTCTGACTAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	87822206	87823433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_87822453_87822553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016369	chr3	+	808	1	Genic_Genomic	ENSMUSG00000004897.17	novel	NA	NA	NA	NA	8867	1	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTAATTCTTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	87822632	87823440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_87822600_87823400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016370	chr3	+	424	2	ISM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	11	1621	11	-1611	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACCTCAAGACAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	87826823	87829358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87827013_87829123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016371	chr3	+	562	4	ISM	ENSMUSG00000019710.14	ENSMUST00000121048.2	1234	5	206	610	206	-600	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTAAGTTGAGGATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	87829121	87830369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87829356_87829437_87829534_87829694_87829799_87830241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016372	chr3	+	530	3	ISM	ENSMUSG00000019710.14	ENSMUST00000121048.2	1234	5	775	172	775	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTTCTTGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	87829690	87830807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87829799_87830241_87830373_87830516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016373	chr3	+	419	1	ISM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	3748	0	1645	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAAGCTTTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87830560	87830979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87830600_87831000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016374	chr3	+	954	2	ISM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	54	8646	54	-7499	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCAAAACTTGCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	87837674	87839347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87837919_87838637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016375	chr3	+	1010	3	ISM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	1	846	1	-846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGAAGGCTGACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	87838627	87846000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87839282_87839346_87839583_87845880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016376	chr3	+	1803	3	ISM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	1076	733	70	414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGGAATTGAGTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	87838696	87847260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87839583_87845880_87846082_87846544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016377	chr3	+	929	1	Genic_Genomic	ENSMUSG00000048039.9	novel	NA	NA	NA	NA	8439	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTATGTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	87847065	87847994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_87847100_87848000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016378	chr3	+	931	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	87855972	87860683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016379	chr3	+	1994	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	85	4047	49	-4047	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAGAGCCAATACCCA	NA	NA	NA	NA	NA	NA	NA	NA	87878484	87883711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016380	chr3	+	2494	2	ISM	ENSMUSG00000004891.17	ENSMUST00000160694.2	5958	5	4282	2415	4282	-2415	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGAGGGCCCGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	87882717	87885343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87883888_87884019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016381	chr3	+	1384	1	ISM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	7975	0	7939	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGCTTTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	87886374	87887758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_87886400_87887800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016382	chr3	-	835	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	73	0	73	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	87965729	87963826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016383	chr3	+	501	2	ISM	ENSMUSG00000001419.18	ENSMUST00000107558.9	1767	11	25559	-263	25559	263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGGACACTTTGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	88075437	88076225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88075652_88075938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016384	chr3	+	625	3	ISM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	9	4999	9	-2049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTATGGGGAAGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	88232338	88233621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88232509_88232983_88233239_88233421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016385	chr3	+	558	3	ISM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	771	4681	712	-1731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCACCAGTGCGAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	88233100	88233939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88233239_88233421_88233620_88233717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016386	chr3	+	527	3	ISM	ENSMUSG00000001418.14	ENSMUST00000176425.2	960	5	1182	253	1182	-248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTAAGGGTTTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	88233570	88235422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88233620_88233717_88233937_88235163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016387	chr3	+	364	2	ISM	ENSMUSG00000001418.14	ENSMUST00000001454.14	1017	5	1319	377	1319	-372	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCCTCATTCACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	88233707	88235298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88233937_88235163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016388	chr3	+	588	2	ISM	ENSMUSG00000001418.14	ENSMUST00000001454.14	1017	5	2764	-154	2764	154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGGGTTCCCAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	88235152	88235829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88235421_88235509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016389	chr3	+	374	1	Genic_Genomic	ENSMUSG00000001418.14	novel	NA	NA	NA	NA	5878	20	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGACTTCAAATCATAT	NA	NA	NA	NA	NA	NA	NA	NA	88238266	88238640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_88238300_88238600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016390	chr3	+	1356	2	ISM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	24583	8	24583	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGCACTCTGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	88268149	88269637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88268200_88268331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016391	chr3	+	1317	1	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	24762	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88268328	88269645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_88268300_88269600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016392	chr3	-	447	3	NNC	ENSMUSG00000074486.3	novel	471	4	NA	NA	26	4	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCTGGAGTCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	88285980	88285038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_88285310_88285515_88285605_88285893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016393	chr3	-	1011	5	NNC	ENSMUSG00000028066.16	novel	1007	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88317638	88301449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_88301878_88303207_88303408_88306441_88306543_88307017_88307124_88317462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016394	chr3	-	698	2	ISM	ENSMUSG00000050144.14	ENSMUST00000168755.7	3418	3	320	10003	320	-10002	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGGGGCTTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	88332094	88327807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88328446_88332034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016395	chr3	-	659	1	ISM	ENSMUSG00000028064.18	ENSMUST00000029700.12	3205	15	19111	11	16492	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAAGAAAGCTTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	88343935	88343276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88343300_88343900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016396	chr3	-	721	2	ISM	ENSMUSG00000028064.18	ENST00000355014.6	2827	13	15220	660	15220	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCACTGGCCTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88345207	88343936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88344560_88345109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016397	chr3	-	619	3	ISM	ENSMUSG00000028063.16	ENST00000361308.9	2477	13	20301	-24	9898	24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATCTCAATCCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88390721	88389152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88389408_88389652_88389920_88390624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016398	chr3	-	1221	5	ISM	ENSMUSG00000028063.16	ENST00000675667.1	2622	11	18510	0	8473	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTTCTATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88392146	88389247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016399	chr3	-	468	3	ISM	ENSMUSG00000028063.16	ENST00000682650.1	2292	11	19360	133	9365	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGCCACCTCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	88391254	88389327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88389408_88389652_88389920_88391133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016400	chr3	-	435	3	ISM	ENSMUSG00000028063.16	ENST00000682650.1	2292	11	19152	519	9157	-466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGGGGACAACCTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	88391462	88389713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88389920_88391133_88391254_88391353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016401	chr3	-	887	5	ISM	ENSMUSG00000028063.16	ENSMUST00000036252.7	1536	10	8159	-1	8159	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88392460	88390511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016402	chr3	-	925	6	ISM	ENSMUSG00000028063.16	ENSMUST00000036252.7	1536	10	6680	667	6680	-667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGAGCAGCCTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	88393939	88391179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016403	chr3	-	1521	8	ISM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	105	908	105	-907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGATCCTTTGATGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	88410509	88391419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016404	chr3	-	566	4	FSM	ENSMUSG00000028062.16	ENSMUST00000119002.2	568	4	3	-1	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88460163	88457125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016405	chr3	-	668	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88460331	88457125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016406	chr3	-	286	2	ISM	ENSMUSG00000028062.16	ENST00000368304.9	372	3	366	-2	342	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATCGGGCGAGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	88459824	88457188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88457312_88459661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016407	chr3	-	129	1	NIC	ENSMUSG00000028062.16	novel	668	4	NA	NA	2849	2	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATATCGGGCGAGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	88457317	88457188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_88457200_88457300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016408	chr3	-	223	2	NNC	ENSMUSG00000028062.16	novel	372	3	NA	NA	398	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATATCGGGCGAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	88459768	88457189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_88457306_88459661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016409	chr3	-	208	2	ISM	ENSMUSG00000028062.16	ENST00000368304.9	372	3	52	2462	28	-2462	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGGCTGACTTCGAAC	NA	NA	NA	NA	NA	NA	NA	NA	88460138	88459652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88459825_88460102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016410	chr3	+	227	1	ISM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	15741	0	15741	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	88476805	88477032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88476800_88477000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016411	chr3	+	332	3	ISM	ENSMUSG00000041355.14	ENSMUST00000193934.6	569	6	-30	6945	3	-6945	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTTTTTTAATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	88486917	88488381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88486994_88487186_88487342_88488280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016412	chr3	+	717	3	FSM	ENSMUSG00000041355.14	ENST00000529008.5	721	3	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGGGGGCTACACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88487182	88495646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_88487342_88488280_88488380_88495187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016413	chr3	+	305	3	ISM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	267	4534	64	-4134	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCTCCAAACCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	88487244	88491192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88487342_88488280_88488380_88491083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016414	chr3	+	224	3	ISM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	1366	1476	1163	-1076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCATTTCTAGTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	88488343	88494250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88488380_88491083_88491193_88494171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016415	chr3	+	169	2	NNC	ENSMUSG00000041355.14	novel	1189	5	NA	NA	3918	-1077	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCATTTCTAGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	88491098	88494249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_88491190_88494171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016416	chr3	+	322	3	ISM	ENSMUSG00000041355.14	ENSMUST00000192495.6	620	6	4142	-14	3935	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTCAAAAGTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	88491115	88495354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88491193_88494171_88494250_88495187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016417	chr3	+	213	1	Genic_Genomic	ENSMUSG00000041355.14	novel	NA	NA	NA	NA	8336	3	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCTTGCGTCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	88495516	88495729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_88495500_88495700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016418	chr3	+	858	1	ISM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	31052	0	24274	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	88554501	88555359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88554500_88555400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016419	chr3	+	491	2	ISM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	24953	901	24906	-901	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCACTTAGAATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	88618062	88619330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88618160_88618936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016420	chr3	+	477	1	ISM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	26645	0	26598	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATGTGCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88619754	88620231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88619800_88620200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016421	chr3	+	884	3	ISM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	9156	-1	9088	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCTTCAACCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	88633300	88637035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88633376_88633586_88633779_88636418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016422	chr3	+	619	1	Genic_Genomic	ENSMUSG00000028057.15	novel	NA	NA	NA	NA	12204	1	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCTTCAACCTGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	88636416	88637035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_88636400_88637000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016423	chr3	+	1628	6	ISM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	7499	-5	7499	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGGCATTCTTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	88794876	88803156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_88794953_88796977_88797147_88798119_88798265_88799884_88799976_88801748_88801866_88802126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016424	chr3	-	1053	2	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAACATGAAAACACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	88803065	88801748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_-_88801873_88802136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016425	chr3	+	1031	1	NIC	ENSMUSG00000054199.18	novel	7537	32	NA	NA	14744	1	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCCTGGCATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	88802121	88803152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_88802100_88803200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016426	chr3	-	254	1	NIC	ENSMUSG00000068922.15	novel	2093	15	NA	NA	4063	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACGCATTTGTACATTTA	NA	NA	NA	NA	NA	NA	NA	NA	88817175	88816921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_88816900_88817200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016427	chr3	-	434	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	3578	80	3510	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGGGGAGGGTAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	88817728	88817001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88817218_88817436_88817547_88817620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016428	chr3	-	345	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	3187	572	3119	-572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTCAAGCTTCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	88818119	88817493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88817547_88817620_88817726_88817932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016429	chr3	-	335	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	2985	786	2917	-786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCCTCTGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	88818321	88817707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88817726_88817932_88818118_88818189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016430	chr3	-	288	2	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	2559	1266	2491	-1266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGCTGTGTGAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	88818747	88818187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88818322_88818593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016431	chr3	-	408	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	2117	1671	2049	-1671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTCAAGCTCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88819189	88818592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88818747_88818843_88818979_88819070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016432	chr3	-	259	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	1884	2006	1816	-2006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGCAGAGCTACTACA	NA	NA	NA	NA	NA	NA	NA	NA	88819422	88818927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88818979_88819070_88819189_88819332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016433	chr3	-	273	3	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	1697	2148	1629	-2148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGTGGCAAGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	88819609	88819069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88819189_88819332_88819421_88819543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016434	chr3	-	236	4	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	1070	2475	1002	-2475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTCAGAGTCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	88820236	88819396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88819421_88819543_88819608_88820009_88820086_88820164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016435	chr3	-	327	2	ISM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	18	3950	18	-3950	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCGATGGTGGGCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	88821288	88820871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88821010_88821099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016436	chr3	-	1270	1	Genic_Genomic	ENSMUSG00000068921.15	novel	NA	NA	NA	NA	27881	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	88829377	88828107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_88828100_88829400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016437	chr3	-	1275	2	ISM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	24611	-949	24611	949	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACAGTATCCCACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	88832647	88829992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88831221_88832600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016438	chr3	-	1091	4	ISM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	707	-8	707	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGTGGGTTTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	88996162	88991277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_88991958_88994079_88994203_88995025_88995258_88996106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016439	chr3	-	678	1	NIC	ENSMUSG00000105204.2	novel	2635	19	NA	NA	16445	-2038	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGTGTCCCTGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	88991961	88991283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_88991300_88992000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016440	chr3	-	547	4	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	6954	-3	6954	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTCTTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89002241	89000891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016441	chr3	-	501	5	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	2455	1271	2455	-1271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGGTGGCACTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	89006740	89002165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016442	chr3	-	592	5	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	1053	1435	1053	-1435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGAGGTGAGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	89008142	89002329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016443	chr3	-	506	5	ISM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	23	1843	23	-1843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCATCTATCGTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89009243	89002737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016444	chr3	+	944	5	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	2796	-2	2766	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTTCCTGTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	89087592	89090074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016445	chr3	+	698	3	ISM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	3676	-2	3646	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTTCCTGTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	89088472	89090074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89088584_89089232_89089351_89089605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016446	chr3	+	627	5	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	120	2440	120	-2440	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCAAAATGGGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	89091079	89094155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89091256_89092195_89092304_89092743_89092917_89093040_89093141_89094085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016447	chr3	+	722	3	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	2079	1680	2079	-1680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGTTTGGGGAAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	89093038	89094915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89093141_89094085_89094156_89094365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016448	chr3	+	872	3	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	3405	810	3405	-810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGTTAGGGGGACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	89094364	89095785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89094912_89095382_89095452_89095529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016449	chr3	+	879	2	ISM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	4567	101	4567	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAAGTTATTTAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	89095526	89096494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89095784_89095872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016450	chr3	+	713	1	ISM	ENSMUSG00000032657.16	ENSMUST00000041913.13	3083	12	5373	3	4923	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTGGAGTATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	89095882	89096595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89095900_89096600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016451	chr3	+	639	3	ISM	ENSMUSG00000028048.12	ENST00000566701.5	1435	9	1793	1171	1793	-1171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCGCCTGTCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	89113092	89114758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89113272_89113440_89113676_89114533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016452	chr3	+	631	3	ISM	ENSMUSG00000028048.12	ENST00000427500.7	1467	8	2144	754	2134	-635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGAGAGCGCGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	89113433	89115294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89113676_89114533_89114759_89115130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016453	chr3	-	320	1	Genic_Genomic	ENSMUSG00000064068.16	novel	NA	NA	NA	NA	4512	5	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCCCTTCTTTCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89116702	89116382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_89116400_89116700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016454	chr3	-	461	2	ISM	ENSMUSG00000064068.16	ENSMUST00000119222.9	1197	7	4248	24	4248	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCTCAGAATAAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	89116966	89116422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89116729_89116811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016455	chr3	-	331	3	ISM	ENSMUSG00000064068.16	ENSMUST00000119222.9	1197	7	3469	487	3469	-487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTTCGGGGGCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	89117745	89116885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89116967_89117413_89117491_89117572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016456	chr3	-	321	3	ISM	ENSMUSG00000064068.16	ENSMUST00000119222.9	1197	7	3229	1049	3229	-1049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGGCTCTCAGAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	89117985	89117447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89117491_89117572_89117756_89117890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016457	chr3	-	320	3	ISM	ENSMUSG00000064068.16	ENSMUST00000119222.9	1197	7	1142	1213	1142	-1213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCACAAATCAGAGAACGA	NA	NA	NA	NA	NA	NA	NA	NA	89120072	89117611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89117756_89117890_89117984_89119989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016458	chr3	-	379	3	ISM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	277	3619	-151	-3608	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATCTTCGTAAAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	89121365	89120006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89120070_89120183_89120254_89121119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016459	chr3	+	389	2	ISM	ENSMUSG00000028047.12	ENST00000541576.5	3188	22	0	9938	0	-9699	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCCCTTTCCAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	89122459	89124204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89122632_89123987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016460	chr3	+	512	3	ISM	ENSMUSG00000028047.12	ENSMUST00000119084.2	2993	22	46	8861	46	-8653	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGGAACCTCTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	89122585	89125250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89122632_89123987_89124195_89124991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016461	chr3	+	419	3	ISM	ENSMUSG00000028047.12	ENST00000541576.5	3188	22	2530	7732	1003	-7493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCGGGACGACATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	89124989	89126410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89125249_89125334_89125438_89126353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016462	chr3	+	358	4	ISM	ENSMUSG00000028047.12	ENST00000541576.5	3188	22	2902	7300	1375	-7061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGTGATGGCGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	89125361	89126842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89125438_89126353_89126437_89126519_89126572_89126695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016463	chr3	+	407	4	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	2388	6598	2388	-6598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGTAAAGTCTGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	89126374	89127305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89126437_89126519_89126572_89126695_89126845_89127161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016464	chr3	+	332	3	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	2708	6645	2708	-6404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGACCCAAATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	89126694	89127499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89126845_89127161_89127303_89127458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016465	chr3	+	339	3	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	3173	5762	3173	-5521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTTTGAACGCAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	89127159	89128382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89127303_89127458_89127537_89128264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016466	chr3	+	338	3	NNC	ENSMUSG00000028047.12	novel	2763	20	NA	NA	3474	-5151	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCAGAGGCTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	89127460	89128752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_89127534_89128264_89128418_89128640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016467	chr3	+	330	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	3485	5151	3485	-5151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCAGAGGCTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	89127471	89128752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89127537_89128264_89128418_89128640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016468	chr3	+	323	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	4283	5006	4283	-5006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGATGACGATGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89128269	89128897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89128418_89128640_89128752_89128833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016469	chr3	+	325	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	4844	3138	4844	-3138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGGATGAAGACGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	89128830	89130765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89128942_89130309_89130470_89130711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016470	chr3	+	334	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	6321	2913	6321	-2913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGTCTGGGCCGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	89130307	89130990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89130470_89130711_89130831_89130937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016471	chr3	+	367	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	6724	2443	6724	-2443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACTGGAGTCCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	89130710	89131460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89130831_89130937_89130991_89131266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016472	chr3	+	427	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	6951	2131	6951	-2131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCGGGGCAGTAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	89130937	89131772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89130991_89131266_89131461_89131592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016473	chr3	+	379	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	7326	1968	7326	-1968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAGGACACCCGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	89131312	89131935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89131461_89131592_89131772_89131883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016474	chr3	+	431	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	7605	1585	7605	-1585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGCCCACTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	89131591	89132318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89131772_89131883_89131933_89132116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016475	chr3	+	424	3	ISM	ENSMUSG00000028047.12	ENST00000541990.5	2763	20	7893	1171	7893	-1171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGAAAAGGCTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	89131879	89132732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89131933_89132116_89132314_89132558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016476	chr3	+	620	3	ISM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	8570	7	8570	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAAGTCAGTGCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	89132556	89134137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89132732_89133610_89133751_89133832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016477	chr3	+	314	1	Genic_Genomic	ENSMUSG00000028047.12	novel	NA	NA	NA	NA	9845	1	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCAATTGTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	89133831	89134145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_89133800_89134100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016478	chr3	-	361	1	ISM	ENSMUSG00000042766.18	ENST00000368382.5	3075	10	11303	0	10482	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGGAGTGAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	89141838	89141477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89141500_89141800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016479	chr3	-	645	2	ISM	ENSMUSG00000042766.18	ENSMUST00000107464.8	3252	10	8418	764	8418	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGAAAGTCACCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	89143902	89142247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89142600_89143609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016480	chr3	-	499	2	ISM	ENSMUSG00000042766.18	ENSMUST00000107464.8	3252	10	7174	2148	7174	1291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGGATGTGATCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	89145146	89143631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89143908_89144923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016481	chr3	-	307	1	NIC	ENSMUSG00000042766.18	novel	3075	10	NA	NA	7091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTACACAGACAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	89145229	89144922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_89144900_89145200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016482	chr3	-	681	3	ISM	ENSMUSG00000042766.18	ENSMUST00000107464.8	3252	10	5487	3440	5487	-1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTACACAGACAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	89146833	89144923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89145227_89146204_89146327_89146577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016483	chr3	-	386	3	ISM	ENSMUSG00000042766.18	ENST00000543729.5	1703	9	3329	1769	2489	-1769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAACACCAGAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89149831	89146691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89146832_89149473_89149570_89149681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016484	chr3	-	564	3	ISM	ENSMUSG00000042766.18	ENST00000543729.5	1703	9	1951	4546	1111	-4546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGCATGGACGTGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	89151209	89149468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89149570_89149681_89149826_89150890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016485	chr3	-	559	2	ISM	ENSMUSG00000042766.18	ENST00000543729.5	1703	9	1478	5979	638	-5979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGCCCCAAGGTGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	89151682	89150901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89151235_89151456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016486	chr3	-	380	2	ISM	ENSMUSG00000042766.18	ENST00000368382.5	3075	10	2	9989	2	-6544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTCAGGTGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	89153139	89151466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89151719_89153011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016487	chr3	-	347	2	ISM	ENSMUSG00000042766.18	ENST00000543729.5	1703	9	10	6578	-9	-6578	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCCCCAAGCCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	89153150	89151500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89151719_89153021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016488	chr3	+	1181	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	0	-9	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTGCGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89153272	89157222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016489	chr3	+	274	2	ISM	ENSMUSG00000042747.13	ENSMUST00000168900.3	582	5	28	2787	28	-2787	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGACTGTATCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	89153768	89154229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89153901_89154087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016490	chr3	+	347	2	FSM	ENSMUSG00000042747.13	ENST00000482246.5	346	2	0	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89154089	89157030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_89154240_89156833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016491	chr3	+	429	4	FSM	ENSMUSG00000042747.13	ENST00000497317.5	438	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTCTGTGAACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	89154098	89157030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_89154240_89154371_89154436_89156380_89156452_89156877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016492	chr3	+	148	1	NIC	ENSMUSG00000042747.13	novel	1172	5	NA	NA	2780	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTTTGTAGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	89156869	89157017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_89156900_89157000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016493	chr3	+	342	2	ISM	ENSMUSG00000042737.10	ENSMUST00000107462.8	827	3	56	551	56	-551	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAGCCCGGAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	89166720	89173833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89166899_89173669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016494	chr3	+	467	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	-93	30	-93	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCGCATTAAAATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	89173765	89174354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_89173914_89174035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016495	chr3	+	354	1	Genic_Genomic	ENSMUSG00000042737.10	novel	NA	NA	NA	NA	175	3	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTAGTTTTGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	89174033	89174387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_89174000_89174400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016496	chr3	-	1008	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	89177863	89175552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016497	chr3	-	538	4	FSM	ENSMUSG00000027953.14	ENST00000484157.5	535	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCAATAGGTTGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	89177449	89175730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016498	chr3	-	1309	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	171	0	167	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTGCCCCACCATG	NA	NA	NA	NA	NA	NA	NA	NA	89186781	89179039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016499	chr3	-	1322	3	ISM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	2604	38	2604	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGCACACACACTCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	89242731	89240734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89241740_89242088_89242158_89242483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016500	chr3	-	597	4	ISM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	7943	0	7888	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCTGCTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	89249339	89246954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016501	chr3	-	265	3	ISM	ENSMUSG00000028041.18	ENST00000359280.8	2599	22	9475	0	9446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAAGCTCTAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	89247781	89247194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89247261_89247361_89247487_89247707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016502	chr3	-	284	3	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	7558	1619	7558	-1619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCCTGGATGCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	89249669	89248813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89248885_89249243_89249383_89249595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016503	chr3	-	494	4	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	6330	2048	6330	-2048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAACATCCTGTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89250897	89249242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89249383_89249595_89249669_89250419_89250498_89250694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016504	chr3	-	583	3	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	5941	3223	5941	-3223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGTGTGGAAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	89251286	89250417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89250498_89250694_89250891_89250979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016505	chr3	-	479	3	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	5708	3617	5708	-3617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCCTGGAAGCCAACGG	NA	NA	NA	NA	NA	NA	NA	NA	89251519	89250811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89250891_89250979_89251285_89251424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016506	chr3	-	680	4	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	5064	3829	5064	-3829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGCGCAGCCCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	89252163	89251023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89251285_89251424_89251518_89251731_89251907_89252012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016507	chr3	-	280	2	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	5309	4230	5309	-4230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTATGGACCTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	89251918	89251424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89251518_89251731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016508	chr3	-	369	3	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	4557	4577	4557	-4577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACCCCGGAGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	89252670	89251771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89251907_89252012_89252162_89252585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016509	chr3	-	472	4	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	4081	4821	4081	-4821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGAGTAACTGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89253146	89252015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89252162_89252585_89252671_89252799_89252970_89253075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016510	chr3	-	321	3	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	2852	5881	2852	-5881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGGGGCTGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	89254375	89253075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89253145_89253249_89253310_89254183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016511	chr3	-	328	3	ISM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	2454	6988	2454	-6988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGCAGCCTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	89254773	89254182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89254374_89254458_89254536_89254713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016512	chr3	-	220	1	ISM	ENSMUSG00000042672.16	ENSMUST00000070820.7	2342	16	14757	58	13820	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGCGATTGAAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	89257803	89257583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89257600_89257800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016513	chr3	-	424	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	11471	71	11471	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCCGGTGTGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	89260152	89257654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89257822_89259773_89259888_89260009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016514	chr3	-	388	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	10674	2426	10674	-2426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACCGGCAGACAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	89260949	89260009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89260153_89260572_89260690_89260821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016515	chr3	-	262	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	10422	3068	10422	-3068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCGCCAAGCTTCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	89261201	89260651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89260690_89260821_89260949_89261104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016516	chr3	-	263	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	10126	3298	10126	-3298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTACTCTGTCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	89261497	89260881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89260949_89261104_89261201_89261397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016517	chr3	-	301	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	7917	3579	7917	-3579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACGGTTATCTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	89263706	89261162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89261201_89261397_89261498_89263543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016518	chr3	-	427	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	6700	5960	6700	-5960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCACCGGCCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	89264923	89263543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89263705_89264124_89264247_89264779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016519	chr3	-	343	2	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	6405	7190	6405	-7190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGTGGGGGAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	89265218	89264773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89264924_89265025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016520	chr3	-	437	3	ISM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	5109	7486	5109	-7486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGATGGTGTATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	89266514	89265069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89265234_89265868_89266009_89266381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016521	chr3	-	259	2	NNC	ENSMUSG00000042672.16	novel	1952	14	NA	NA	5614	-7529	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGAGATGTTCGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	89266009	89265112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_89265234_89265871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016522	chr3	-	173	2	NNC	ENSMUSG00000042672.16	novel	1952	14	NA	NA	5213	-8278	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTATAGTCCCTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	89266410	89265861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_89266009_89266384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016523	chr3	-	245	2	NNC	ENSMUSG00000042672.16	novel	1952	14	NA	NA	2	-8797	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGTGGCTGCCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	89271621	89266380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_89266511_89271506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016524	chr3	+	391	1	Genic_Genomic	ENSMUSG00000074466.13	novel	NA	NA	NA	NA	4104	5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATATTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89305700	89306091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_89305700_89306100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016525	chr3	-	1097	4	FSM	ENSMUSG00000042642.14	ENST00000295530.6	1092	4	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAATGTGATCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	89316492	89310485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_89310609_89310803_89310915_89313161_89313261_89315728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016526	chr3	-	1937	4	FSM	ENSMUSG00000042642.14	ENST00000368433.5	1976	4	39	0	39	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGATTGTTGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89319129	89312881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_89313261_89314715_89314864_89315728_89316474_89318464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016527	chr3	-	478	1	ISM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	2434	0	2068	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	89323256	89322778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89322800_89323300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016528	chr3	-	851	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	89325692	89322778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_89323271_89323580_89323709_89325461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016529	chr3	-	832	3	NNC	ENSMUSG00000028044.7	novel	849	3	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	89325669	89322778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_89323271_89323580_89323709_89325457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016530	chr3	-	845	3	NNC	ENSMUSG00000028044.7	novel	849	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	89325682	89322778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_89323271_89323576_89323709_89325461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016531	chr3	-	527	3	FSM	ENSMUSG00000028044.7	ENST00000368439.5	864	3	110	227	110	-145	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGCGGGACCCAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	89325503	89323008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_89323271_89323580_89323709_89325366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016532	chr3	+	446	4	ISM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	3158	2079	3120	-2079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAATCCTTCTCTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	89332092	89334327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89332200_89333821_89334009_89334094_89334165_89334245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016533	chr3	+	1153	3	ISM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	5308	4	5270	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCGCACGCCTTTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	89334242	89336402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89334378_89334514_89334754_89335623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016534	chr3	+	941	2	NNC	ENSMUSG00000042626.14	novel	2408	11	NA	NA	5542	-78	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGGAGTGGCCGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	89334514	89336328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_89334751_89335623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016535	chr3	+	1211	2	ISM	ENSMUSG00000042626.14	ENST00000368445.9	3005	13	6650	-1	6650	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	89335622	89337001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89336403_89336570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016536	chr3	+	723	1	Genic_Genomic	ENSMUSG00000042626.14	novel	NA	NA	NA	NA	7641	2	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCTGGAAAGTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	89336613	89337336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_89336600_89337300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016537	chr3	+	396	1	Genic_Genomic	ENSMUSG00000047824.14	novel	NA	NA	NA	NA	3899	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCTTTGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	89342042	89342438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_89342000_89342400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016538	chr3	+	724	6	ISM	ENSMUSG00000042613.10	ENST00000368460.7	860	8	6392	0	3593	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCAAGGGGGGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89350436	89353724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89350556_89350758_89350824_89350902_89351063_89352758_89352900_89353379_89353481_89353586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016539	chr3	+	557	4	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	3913	2098	3913	-243	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTATGGGTTTTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	89350756	89353481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89350824_89350902_89351063_89352758_89352987_89353379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016540	chr3	+	1562	4	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	5912	129	5912	-129	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTTGGAGGACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	89352755	89355450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89352987_89353379_89353481_89353586_89353719_89354352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016541	chr3	+	1128	1	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	7609	1	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGATGGGCGTGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	89354452	89355580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_89354500_89355600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016542	chr3	+	1096	2	ISM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	11009	1735	8178	945	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGAGACAGCTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	89355021	89356524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89355573_89355979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016543	chr3	+	540	1	Genic_Genomic	ENSMUSG00000042613.10	novel	NA	NA	NA	NA	10878	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTCTTCTCTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	89357721	89358261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_89357700_89358300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016544	chr3	+	595	4	ISM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	-5	1441	-5	-1432	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATCCAGTGGTTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	89366419	89374879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016545	chr3	+	463	3	ISM	ENSMUSG00000027952.17	ENSMUST00000184515.2	1156	5	70	4558	70	-4556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGGGGCTCGGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	89366947	89371755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89367194_89369188_89369253_89371602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016546	chr3	+	822	4	ISM	ENSMUSG00000027952.17	ENSMUST00000184515.2	1156	5	2311	18	2311	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTTACTTGGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	89369188	89376295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89369253_89371602_89371756_89374853_89374984_89375820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016547	chr3	+	507	1	Genic_Genomic	ENSMUSG00000027952.17	novel	NA	NA	NA	NA	8939	3	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGACTGATGATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	89375816	89376323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_89375800_89376300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016548	chr3	-	873	2	ISM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	45449	-44	45449	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89909759	89907599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89908299_89909585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016549	chr3	-	502	2	ISM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	44111	2	39540	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACTCTGCGTTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	89915668	89913528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89913925_89915562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016550	chr3	-	519	3	ISM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	28841	14810	24270	-14810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGGCTAAATCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	89930938	89928336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_89928377_89928545_89928824_89930737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016551	chr3	+	493	3	ISM	ENSMUSG00000027942.18	ENSMUST00000029552.13	1080	6	9	2774	4	-2774	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTGACAAGCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	89960152	89963630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89960427_89960814_89960917_89963513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016552	chr3	+	727	5	FSM	ENSMUSG00000027942.18	ENST00000362076.8	726	5	27	-28	27	28	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGTTCAGCAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	89960275	89969176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_89960427_89963513_89963632_89965791_89965959_89966048_89966108_89968944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016553	chr3	+	242	3	ISM	ENSMUSG00000027942.18	ENSMUST00000029552.13	1080	6	703	2515	598	-2515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAGCTGATAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	89960846	89963889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89960917_89963513_89963632_89963835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016554	chr3	+	341	3	ISM	ENSMUSG00000027942.18	ENSMUST00000029552.13	1080	6	3370	444	3265	-444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGAACTGTTGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	89963513	89965960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89963632_89963835_89963890_89965791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016555	chr3	+	274	3	ISM	ENSMUSG00000027942.18	ENSMUST00000029552.13	1080	6	3692	303	3587	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGAGTATGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	89963835	89966101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89963890_89965791_89965959_89966048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016556	chr3	+	240	2	NNC	ENSMUSG00000027942.18	novel	726	5	NA	NA	5825	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCAGCCGTGCAGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	89966073	89969152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_89966106_89968944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016557	chr3	+	277	1	NIC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	10176	-2516	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAGAGAGAAAAACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	89970386	89970663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_89970400_89970700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016558	chr3	+	2136	9	FSM	ENSMUSG00000027940.19	ENST00000328159.9	1525	9	-106	-505	2	-166	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGTGGTTTCTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	89986848	90008037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016559	chr3	+	499	3	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	19	-4609	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAGGAAGCAAAGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	89986865	89994828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_89987171_89993752_89993880_89994761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016560	chr3	+	267	3	ISM	ENSMUSG00000027940.19	ENSMUST00000119158.8	1090	8	7738	9660	7738	-3007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGCTGGTTTGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	89994759	89996430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89994880_89994980_89995052_89996354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016561	chr3	+	1657	5	ISM	ENSMUSG00000027940.19	ENST00000368533.8	2043	9	8000	15	7957	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGCTTGACTTTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	89994978	90008209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016562	chr3	+	282	4	ISM	ENSMUSG00000027940.19	ENSMUST00000119158.8	1090	8	7957	8704	7957	-2051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGCACATGAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	89994978	89997386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89995052_89996354_89996431_89997103_89997167_89997316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016563	chr3	+	248	4	ISM	ENSMUSG00000027940.19	ENST00000330188.13	2046	9	9404	1326	9337	-655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGACCAGACCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89996358	90006877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_89996431_89997103_89997167_89997316_89997387_90006834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016564	chr3	+	1230	1	NIC	ENSMUSG00000027940.19	novel	2043	9	NA	NA	19960	2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCTTGACTTTGTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	90006981	90008211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_90007000_90008200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016565	chr3	+	454	2	ISM	ENSMUSG00000027940.19	ENST00000368533.8	2043	9	20332	389	20289	303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCAGTGCTGGAGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	90007310	90007835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90007542_90007612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016566	chr3	+	337	1	FSM	ENSMUSG00000104649.2	ENSMUST00000198020.2	291	1	13	-59	13	59	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGTTTATAGCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	90034086	90034423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90034100_90034400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016567	chr3	-	342	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	7	-4	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCTTGTTTAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	90120951	90119973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016568	chr3	-	290	3	ISM	ENSMUSG00000090733.7	ENSMUST00000195998.5	458	5	198	266	198	-262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCTCAGTGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	90120756	90120239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90120352_90120499_90120609_90120687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016569	chr3	+	501	2	ISM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	4063	12	4063	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGCATGAATGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90132156	90133264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90132209_90132815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016570	chr3	+	483	1	Genic_Genomic	ENSMUSG00000027935.15	novel	NA	NA	NA	NA	5118	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCAAGTTGATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	90133211	90133694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_90133200_90133700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016571	chr3	+	355	3	ISM	ENSMUSG00000027937.16	ENSMUST00000119304.2	878	5	195	3033	195	-3033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATTTGGGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	90139113	90139818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90139348_90139501_90139540_90139735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016572	chr3	+	202	3	ISM	ENSMUSG00000027937.16	ENSMUST00000119304.2	878	5	582	1542	582	-1542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTTGTTTCTCTACC	NA	NA	NA	NA	NA	NA	NA	NA	90139500	90141309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90139540_90139735_90139819_90141229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016573	chr3	+	336	3	ISM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	828	287	813	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTATGGTGGCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	90139731	90142858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90139819_90141229_90141310_90142689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016574	chr3	+	251	1	Genic_Genomic	ENSMUSG00000027937.16	novel	NA	NA	NA	NA	3977	1	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTGTAATCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	90142895	90143146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_90142900_90143100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016575	chr3	+	2163	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	4	197	4	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTCCATACCTAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90155482	90160722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016576	chr3	+	1342	3	ISM	ENSMUSG00000052310.10	ENST00000368623.7	2284	4	14	1245	14	-1241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGCTATCAGGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	90155941	90159674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90156471_90156632_90156764_90158992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016577	chr3	+	370	2	ISM	ENSMUSG00000052310.10	ENST00000537590.5	1830	3	38	1739	31	-1735	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAACTCCAGCAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	90156288	90159180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90156471_90158992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016578	chr3	+	1700	2	NNC	ENSMUSG00000052310.10	novel	2364	4	NA	NA	376	-347	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCTGGGGCCTGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	90156633	90160568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90156764_90158998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016579	chr3	+	1442	2	ISM	ENSMUSG00000052310.10	ENST00000310483.10	1950	4	2903	-4	2903	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	90159160	90160919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90160208_90160524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016580	chr3	+	1754	1	Genic_Genomic	ENSMUSG00000052310.10	novel	NA	NA	NA	NA	2909	1	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGGTATCTGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90159166	90160920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_90159200_90160900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016581	chr3	+	771	3	ISM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	16	1406	16	-1406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATGCAAACTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	90161649	90170021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90161812_90168065_90168411_90169757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016582	chr3	+	1440	4	ISM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	6429	0	6429	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGTGCTTGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	90168062	90171427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90168411_90169757_90170022_90170477_90170665_90170786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016583	chr3	+	652	1	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	9143	1	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGTGCTTGGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	90170776	90171428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_90170800_90171400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016584	chr3	+	1092	1	ISM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	69138	0	20660	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGACTTGTGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	90269622	90270714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90269600_90270700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016585	chr3	-	430	2	ISM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	3543	0	3543	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	90293691	90292545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90292841_90293556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016586	chr3	+	1189	4	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	10704	0	10704	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	90394157	90395686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90394220_90394289_90394405_90394533_90394625_90394765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016587	chr3	+	919	1	Genic_Genomic	ENSMUSG00000001016.13	novel	NA	NA	NA	NA	11315	1	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTACAAGCATTTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	90394768	90395687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_90394800_90395700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016588	chr3	-	193	1	ISM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	2807	0	2807	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTACTGAGGTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	90395533	90395340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90395300_90395500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016589	chr3	-	315	3	ISM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	436	1414	436	-1414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGTAGACACGAG	NA	NA	NA	NA	NA	NA	NA	NA	90397904	90396754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90396901_90397460_90397580_90397854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016590	chr3	-	291	3	ISM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	52	2145	52	-2145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAATATTTTACAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	90398288	90397485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90397580_90397854_90397902_90398138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016591	chr3	-	1155	1	Genic_Genomic	ENSMUSG00000001017.16	novel	NA	NA	NA	NA	6358	1	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTTTCTGTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	90407416	90406261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_90406300_90407400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016592	chr3	-	1315	2	ISM	ENSMUSG00000001017.16	ENSMUST00000107343.8	3118	4	6169	23	3186	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTGTTCTCTCAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	90410588	90406285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90407415_90410402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016593	chr3	-	740	3	ISM	ENSMUSG00000001017.16	ENST00000368687.1	1095	4	3186	-3	3186	3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGAGTTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	90410588	90406998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90407415_90409422_90409561_90410402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016594	chr3	-	455	2	NNC	ENSMUSG00000001017.16	novel	1095	4	NA	NA	4214	-90	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGGACTTACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	90409560	90407091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_90407415_90409428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016595	chr3	-	548	2	ISM	ENSMUSG00000001017.16	ENST00000368687.1	1095	4	0	3397	0	-3397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTCTGTGTAGCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	90413774	90410398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90410587_90413414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016596	chr3	-	181	2	ISM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	3325	3650	318	-3449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACGTGCTACCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	90413456	90410450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90410590_90413414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016597	chr3	-	102	2	ISM	ENSMUSG00000001017.16	ENSMUST00000107342.2	2411	4	247	7878	212	-7878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCACCAAGATGTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	90416545	90414879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_90414934_90416497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016598	chr3	-	339	1	Genic_Genomic	ENSMUSG00000044080.10	novel	NA	NA	NA	NA	2912	6	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTACCCTCTGGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	90418673	90418334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_90418300_90418700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016599	chr3	-	671	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	2	4	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATCAATGTCTGTACCC	NA	NA	NA	NA	NA	NA	NA	NA	90421697	90418344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_90418672_90419302_90419457_90421507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016600	chr3	+	713	4	FSM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	6	-4	6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTATTTATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	90421747	90431892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90421773_90422064_90422327_90423156_90423350_90431659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016601	chr3	+	688	3	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	323	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	90422064	90431888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90422327_90423156_90423354_90431659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016602	chr3	+	436	2	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	1401	0	1401	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	90423142	90431888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90423350_90431659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016603	chr3	+	1130	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098911.10	1127	3	0	-3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTGCTTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	90444560	90450458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90444725_90449300_90449480_90449671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016604	chr3	+	1031	4	FSM	ENSMUSG00000074457.11	ENST00000368705.2	754	4	0	-277	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGTACCAGAATTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	90448329	90450291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90448625_90449300_90449480_90449671_90449812_90449874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016605	chr3	+	1011	4	NNC	ENSMUSG00000074457.11	novel	754	4	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGTACCAGAATTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	90448345	90450291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90448625_90449300_90449480_90449671_90449812_90449878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016606	chr3	+	1090	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098910.3	1123	3	21	12	21	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTGTAACTCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	90448488	90450446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90448625_90449300_90449480_90449671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016607	chr3	-	806	2	Antisense	novelGene_ENSMUSG00000074457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTAGGAAGCAGAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	90450304	90449302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_-_90449474_90449669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016608	chr3	+	789	1	Genic_Genomic	ENSMUSG00000074457.11	novel	NA	NA	NA	NA	352	1	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTGCTTCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	90449670	90450459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_90449700_90450500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016609	chr3	+	710	3	FSM	ENSMUSG00000001021.14	ENSMUST00000001047.8	712	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTTTGTTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90507523	90510009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90507576_90509086_90509233_90509497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016610	chr3	+	429	3	FSM	ENSMUSG00000001020.9	ENSMUST00000001046.7	498	3	0	69	0	-69	multi-exon	FALSE	canonical	NA	NA	NA	NA	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTACTCTGGCTTCTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	90511077	90513283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90511114_90512303_90512460_90513046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016611	chr3	-	319	2	Antisense	novelGene_ENSMUSG00000001020.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGGCAGGAGACACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90513208	90512302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_-_90512454_90513040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016612	chr3	+	274	2	NNC	ENSMUSG00000001020.9	novel	498	3	NA	NA	1225	-179	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGCTGCCCAGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	90512302	90513173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90512460_90513056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016613	chr3	+	221	2	NNC	ENSMUSG00000001020.9	novel	498	3	NA	NA	1279	-192	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAATGAATTCTTTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	90512356	90513160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90512464_90513046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016614	chr3	+	310	1	Genic_Genomic	ENSMUSG00000105518.2_ENSMUSG00000001020.9	novel	NA	NA	NA	NA	1968	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2096	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTGAGAGACTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	90513045	90513355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_90513000_90513400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016615	chr3	+	160	2	FSM	ENSMUSG00000001023.11	ENST00000368718.5	391	2	62	169	62	-169	multi-exon	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGACCACGCTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	90517192	90518904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90517269_90518820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016616	chr3	+	125	1	ISM	ENSMUSG00000001023.11	ENSMUST00000107329.8	431	3	3119	14	1818	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTATCCATTACACGCACT	NA	NA	NA	NA	NA	NA	NA	NA	90518948	90519073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_90518900_90519100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016617	chr3	+	739	3	FSM	ENSMUSG00000001025.9	ENSMUST00000001051.9	731	3	-2	-6	-2	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTGGCTTCCCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	90520186	90521727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90520534_90521049_90521212_90521497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016618	chr3	+	716	3	NNC	ENSMUSG00000001025.9	novel	731	3	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520194	90521722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90520534_90521059_90521212_90521497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016619	chr3	+	720	3	NNC	ENSMUSG00000001025.9	novel	731	3	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520195	90521722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90520529_90521049_90521212_90521497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016620	chr3	+	716	3	NNC	ENSMUSG00000001025.9	novel	731	3	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520195	90521722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90520534_90521049_90521212_90521506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016621	chr3	+	712	3	NNC	ENSMUSG00000001025.9	novel	731	3	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520203	90521722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90520534_90521049_90521216_90521506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016622	chr3	+	713	3	NNC	ENSMUSG00000001025.9	novel	731	3	NA	NA	16	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520204	90521722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90520534_90521049_90521212_90521500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016623	chr3	+	660	3	NNC	ENSMUSG00000001025.9	novel	731	3	NA	NA	60	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520248	90521722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90520522_90521049_90521212_90521497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016624	chr3	+	466	3	FSM	ENSMUSG00000001025.9	ENSMUST00000198128.2	464	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520610	90521722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_90520690_90521049_90521212_90521497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016625	chr3	+	445	3	NNC	ENSMUSG00000001025.9	novel	464	3	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGTGTTCTGGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90520621	90521722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_90520690_90521059_90521212_90521497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016626	chr3	+	635	2	FSM	ENSMUSG00000054215.3	ENSMUST00000067102.3	637	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGAAGTTTTTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	92339890	92341232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_92339929_92340635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016627	chr3	+	598	1	NIC	ENSMUSG00000054215.3	novel	637	2	NA	NA	746	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGAAGTTTTTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	92340634	92341232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_92340600_92341200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016628	chr3	-	1190	1	NIC	ENSMUSG00000045539.4	novel	1222	2	NA	NA	1029	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCTGTGTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	92364998	92363808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_92363800_92365000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016629	chr3	-	1214	2	FSM	ENSMUSG00000045539.4	ENSMUST00000058142.4	1222	2	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGCCTCTGTGTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	92366020	92363809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_92364997_92365993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016630	chr3	-	484	1	ISM	ENSMUSG00000050359.8	ENSMUST00000054599.8	806	2	1460	0	1460	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTGTGTATGTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	92391742	92391258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_92391300_92391700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016631	chr3	-	527	2	FSM	ENSMUSG00000050359.8	ENSMUST00000054599.8	806	2	3	276	3	-276	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGATGCTGAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	92393199	92391534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_92392019_92393156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016632	chr3	-	352	2	NNC	ENSMUSG00000057609.7	novel	705	2	NA	NA	1	383	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGCCATGATAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	92554482	92553458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_92553482_92554153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016633	chr3	-	362	2	FSM	ENSMUSG00000057609.7	ENST00000326233.7	355	2	-2	-5	-2	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAACTAACACTTTAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	92554485	92554035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_92554099_92554186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016634	chr3	-	355	2	NNC	ENSMUSG00000057609.7	novel	355	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554483	92554040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_92554069_92554156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016635	chr3	-	349	2	NNC	ENSMUSG00000057609.7	novel	355	2	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554480	92554040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_92554084_92554174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016636	chr3	-	347	2	NNC	ENSMUSG00000057609.7	novel	355	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554484	92554040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_92554087_92554183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016637	chr3	-	352	2	NNC	ENSMUSG00000057609.7	novel	355	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554483	92554040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_92554096_92554186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016638	chr3	-	347	2	NNC	ENSMUSG00000057609.7	novel	355	2	NA	NA	8	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554475	92554040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_92554096_92554183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016639	chr3	-	352	2	NNC	ENSMUSG00000057609.7	novel	355	2	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAGCAACTAACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92554486	92554040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_92554099_92554192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016640	chr3	-	350	1	ISM	ENSMUSG00000057609.7	ENSMUST00000074142.7	705	2	1132	291	1	-92	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGTGGTGGCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	92554482	92554132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_92554100_92554500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016641	chr3	+	633	1	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGAGAGATGAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	92597866	92598499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_+_92597900_92598500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016642	chr3	-	345	1	ISM	ENSMUSG00000027919.6	ENSMUST00000029527.6	925	2	1846	0	1846	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCCCCTTTCCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	92657799	92657454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_92657500_92657800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016643	chr3	-	645	1	ISM	ENSMUSG00000090314.3	ENSMUST00000163439.3	1078	2	1209	4	367	2	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACGGCGGCTCCTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	92776314	92775669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_92775700_92776300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016644	chr3	-	813	2	FSM	ENSMUSG00000090314.3	ENST00000368775.3	950	2	1	136	1	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGCTATGTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	92776680	92775807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_92776421_92776480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016645	chr3	+	1758	2	ISM	ENSMUSG00000049133.8	ENST00000388718.5	2668	3	2905	859	-27	-859	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCAGCAGCATGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	93107489	93109704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_93107655_93108111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016646	chr3	+	1630	1	ISM	ENSMUSG00000049133.8	ENST00000388718.5	2668	3	4349	0	1417	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGGGTCAGGTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	93108933	93110563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_93108900_93110600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016647	chr3	+	513	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAGAGTCAGTAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	93427793	93433595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_93427861_93431357_93431507_93433298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016648	chr3	+	387	2	NNC	ENSMUSG00000027907.5	novel	511	3	NA	NA	3562	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCCCACGCCTGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	93431356	93433541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_93431507_93433304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016649	chr3	+	307	1	Genic_Genomic	ENSMUSG00000027907.5	novel	NA	NA	NA	NA	5502	9	mono-exon	FALSE	NA	NA	NA	NA	NA	1524	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTAGATTTGTGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	93433296	93433603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_93433300_93433600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016650	chr3	+	578	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	-2	109	-2	84	multi-exon	TRUE	canonical	NA	NA	NA	NA	2158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAACAATCTGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	93462384	93471841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_93462519_93468250_93468403_93471549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016651	chr3	+	247	2	NNC	ENSMUSG00000041959.15	novel	685	3	NA	NA	268	-52	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGGCCAACTGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	93468301	93471705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_93468393_93471549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016652	chr3	+	265	2	NNC	ENSMUSG00000041959.15	novel	685	3	NA	NA	319	12	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCTGCCCCACTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	93468352	93471769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_93468407_93471558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016653	chr3	+	332	1	Genic_Genomic	ENSMUSG00000041959.15	novel	NA	NA	NA	NA	3592	7	mono-exon	FALSE	NA	NA	NA	NA	NA	2005	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGAGTGTTTCTTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	93471625	93471957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_93471600_93472000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016654	chr3	+	912	3	NNC	ENSMUSG00000041912.13	novel	1231	6	NA	NA	1722	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTATGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	94331828	94333696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_94331998_94332869_94333014_94333097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016655	chr3	-	882	5	FSM	ENSMUSG00000028141.13	ENST00000321531.10	880	5	1	-3	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCTGTTTCTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94351139	94340692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343433_94350944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016656	chr3	-	703	4	FSM	ENSMUSG00000028141.13	ENST00000635322.1	704	4	3	-2	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGCTGTTTCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	94351137	94340693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_94340948_94341770_94341857_94343262_94343433_94350944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016657	chr3	-	657	4	ISM	ENSMUSG00000028141.13	ENST00000400999.7	911	5	5	1072	5	-1072	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTTCCCTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	94343916	94341767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94341857_94342277_94342454_94343262_94343433_94343694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016658	chr3	+	894	4	ISM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	1575	267	1563	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTCCACTAAGATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	94352206	94355748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_94352259_94353942_94354045_94354566_94354651_94355092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016659	chr3	+	701	1	Genic_Genomic	ENSMUSG00000028140.14	novel	NA	NA	NA	NA	4688	17	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTATTTCTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	94355331	94356032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_94355300_94356000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016660	chr3	+	314	2	ISM	ENSMUSG00000028137.10	ENSMUST00000199775.5	2351	12	-49	11836	-49	-11830	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCAGCACGGTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	94386335	94387665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_94386559_94387574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016661	chr3	+	289	2	ISM	ENSMUSG00000028137.10	ENSMUST00000199775.5	2351	12	7444	5258	7444	-5252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCCTGTGCTAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	94393828	94394243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_94393975_94394100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016662	chr3	+	289	2	ISM	ENSMUSG00000028137.10	ENSMUST00000199775.5	2351	12	9058	3523	9058	-3517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAATATGATGATCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	94395442	94395978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_94395587_94395833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016663	chr3	+	285	2	ISM	ENSMUSG00000028137.10	ENSMUST00000199775.5	2351	12	9447	2585	9447	-2579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGCTGCTCCTGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	94395831	94396916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_94395978_94396777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016664	chr3	+	430	2	ISM	ENSMUSG00000028137.10	ENSMUST00000199775.5	2351	12	10392	770	10392	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAGCCTCTGTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	94396776	94398731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_94396915_94398439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016665	chr3	+	281	1	ISM	ENSMUSG00000028137.10	ENST00000290583.9	3427	13	13762	0	13012	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCACATCAAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	94399396	94399677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_94399400_94399700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016666	chr3	-	908	1	ISM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	84265	0	63581	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	94405758	94404850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94404800_94405800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016667	chr3	-	897	1	ISM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	82512	1764	61828	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAAATATAGTAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94407511	94406614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94406600_94407500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016668	chr3	-	744	1	ISM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	45130	241	45059	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTATAGTGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	94521048	94520304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94520300_94521000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016669	chr3	-	885	3	ISM	ENSMUSG00000005968.15	ENST00000353024.4	1363	8	30488	59	30488	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACACTTCCACCCATAA	NA	NA	NA	NA	NA	NA	NA	NA	94535619	94520364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94521065_94530054_94530124_94535503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016670	chr3	-	784	5	ISM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	740	-1	740	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGTCTTTCTCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	94793532	94791402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016671	chr3	-	693	6	ISM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	142	578	142	-578	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCAAGCTACAGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	94794130	94791981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016672	chr3	-	815	5	ISM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	7831	0	7760	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATAGTGATAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	94942094	94940004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016673	chr3	-	731	5	ISM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	7859	0	7850	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATAGTGATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	94942004	94940007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016674	chr3	-	1037	1	ISM	ENSMUSG00000028126.17	ENSMUST00000107236.9	3618	15	47275	34	46961	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTAGCAATCATTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	94966911	94965874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94965900_94966900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016675	chr3	-	290	2	ISM	ENSMUSG00000028126.17	ENST00000441902.6	1777	14	35617	8237	35617	-8237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATGCACAGAGGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	94978255	94975520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_94975578_94978022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016676	chr3	+	1194	5	ISM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	7308	-36	7308	36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTCTTGCTAATTTATC	NA	NA	NA	NA	NA	NA	NA	NA	95025640	95030398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016677	chr3	+	707	1	Genic_Genomic	ENSMUSG00000008958.15	novel	NA	NA	NA	NA	11356	33	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAAGTTCTTGCTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	95029688	95030395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_95029700_95030400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016678	chr3	+	362	2	ISM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	3867	793	3867	-793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTGAATCTAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	95045265	95046036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95045298_95045706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016679	chr3	-	1912	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCTTAGTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95135977	95126445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_95127775_95135394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016680	chr3	+	173	2	ISM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	65	4521	65	-2652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTAGGATTTCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	95136107	95139199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95136177_95139095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016681	chr3	+	272	2	ISM	ENSMUSG00000046722.15	ENSMUST00000107201.9	907	5	2980	1923	-355	-1881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGGGAAGGGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	95139242	95139970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95139404_95139859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016682	chr3	+	172	2	ISM	ENSMUSG00000046722.15	ENSMUST00000107200.8	637	4	275	979	269	-979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTCCCATGGGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	95139872	95140872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95139971_95140798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016683	chr3	+	130	2	ISM	ENSMUSG00000046722.15	ENSMUST00000107200.8	637	4	1203	251	1197	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCCCAAAAGAAATGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	95140800	95141600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95140891_95141560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016684	chr3	+	151	1	Genic_Genomic	ENSMUSG00000046722.15	novel	NA	NA	NA	NA	3971	5	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCAGAGTAATCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	95143574	95143725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_95143600_95143700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016685	chr3	-	1204	1	ISM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	27199	0	26865	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95162188	95160984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95161000_95162200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016686	chr3	-	1873	6	ISM	ENSMUSG00000015711.9	ENST00000368936.5	1441	7	13416	-587	13416	-575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGCTCAAGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	95175637	95161559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95175541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016687	chr3	+	1168	2	ISM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	68	7968	-57	-7959	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACCTAAGGTAGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	95190322	95195509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95190937_95194955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016688	chr3	+	737	2	ISM	ENSMUSG00000038712.17	ENSMUST00000168223.2	1812	9	-239	5097	-239	-5091	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACACACCTTGGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	95195019	95198377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95195712_95198332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016689	chr3	+	658	2	ISM	ENSMUSG00000038712.17	ENSMUST00000168223.2	1812	9	7336	-3	7336	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	95202594	95203477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95202737_95202961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016690	chr3	+	439	1	ISM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	12784	0	7780	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	95203038	95203477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95203000_95203500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016691	chr3	-	804	2	FSM	ENSMUSG00000093424.4	ENSMUST00000098867.4	784	2	9	-29	9	29	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGAGCTTATGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95222419	95214953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_95215452_95222113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016692	chr3	+	1416	5	ISM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	6513	-4	6513	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTAGTTTTTTTCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	95228907	95230914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016693	chr3	-	129	1	NIC	ENSMUSG00000015697.15	novel	539	2	NA	NA	761	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTGTCACTGCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	95230120	95229991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_95230000_95230100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016694	chr3	-	164	2	NNC	ENSMUSG00000015697.15	novel	539	2	NA	NA	300	-70	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTAGCTAGGAGCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	95230581	95230061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_95230118_95230473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016695	chr3	-	661	6	ISM	ENSMUSG00000015697.15	ENST00000368963.5	945	7	1506	18	1506	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATCCTCTTTCTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	95262003	95248982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95249158_95252836_95252911_95254306_95254433_95255306_95255407_95257149_95257185_95261852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016696	chr3	+	541	3	ISM	ENSMUSG00000015522.19	ENST00000505755.5	2355	20	21803	19256	21803	15321	internal_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGGATTGTGTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95377484	95383500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95377702_95381849_95382064_95383390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016697	chr3	+	479	5	NNC	ENSMUSG00000015522.19	novel	2355	20	NA	NA	27702	-10451	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGCGTAGCTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	95383383	95392305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_95383494_95387505_95387572_95388064_95388151_95391082_95391164_95392169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016698	chr3	+	436	4	NNC	ENSMUSG00000015522.19	novel	2355	20	NA	NA	35409	-6938	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACCCTTCAGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	95391090	95395818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_95391164_95392169_95392305_95394559_95394635_95395665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016699	chr3	+	483	3	ISM	ENSMUSG00000015522.19	ENST00000505755.5	2355	20	42649	830	42649	-830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGGTAAAGACTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	95398330	95401926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95398482_95401008_95401172_95401757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016700	chr3	+	781	3	ISM	ENSMUSG00000015522.19	ENST00000505755.5	2355	20	45325	-307	45325	181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAGAAATGCCCTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	95401006	95403063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95401172_95401757_95401925_95402614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016701	chr3	+	680	2	NNC	ENSMUSG00000015522.19	novel	4338	22	NA	NA	47197	727	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGCTACATGAACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	95402878	95403609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_95403227_95403277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016702	chr3	+	553	4	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	19	2267	19	-2267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTCTTCCTGTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	95408160	95414041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95408266_95408657_95408781_95408861_95409018_95413872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016703	chr3	+	543	4	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	524	1979	524	-1979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACACTGACCTTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	95408665	95414329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95408781_95408861_95409018_95413872_95414039_95414223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016704	chr3	+	605	4	ISM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	719	-1	719	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGGCGCTCCTGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	95408860	95416309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95409018_95413872_95414039_95414223_95414330_95416133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016705	chr3	+	762	5	ISM	ENSMUSG00000038642.11	ENST00000448301.7	879	6	9277	0	9277	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGCTATTTTTACACC	NA	NA	NA	NA	NA	NA	NA	NA	95446029	95463614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95446155_95450323_95450474_95454106_95454273_95457363_95457467_95463396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016706	chr3	+	508	1	ISM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	29801	0	29801	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTCTCTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	95526045	95526553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95526000_95526600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016707	chr3	+	553	1	FSM	ENSMUSG00000060438.6	ENSMUST00000074353.6	495	1	-3	-55	-3	55	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCACAACAATCAGAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	95529585	95530138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_95529600_95530100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016708	chr3	+	565	3	FSM	ENSMUSG00000038619.13	ENST00000503241.1	558	3	-7	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCTTGCCATCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	95532336	95536098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_95532488_95534059_95534227_95535851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016709	chr3	+	450	3	NNC	ENSMUSG00000038619.13	novel	485	3	NA	NA	10	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCGGGGTAACCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	95532353	95536009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_95532488_95534068_95534227_95535851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016710	chr3	+	976	4	FSM	ENSMUSG00000038619.13	ENSMUST00000058230.13	1130	4	84	70	-25	-70	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGAGCCCCACAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95532405	95539343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_95532488_95534059_95534186_95535851_95536019_95538742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016711	chr3	+	817	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	108	2920	8	395	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTTAAAATTACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	95532438	95536493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_95532488_95534059_95534186_95535851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016712	chr3	+	413	2	NNC	ENSMUSG00000038619.13	novel	558	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCTTGCCATCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	95534056	95536098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_95534223_95535851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016713	chr3	+	249	2	ISM	ENSMUSG00000038619.13	ENST00000638926.1	344	3	1631	36	4	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGTCCTCGCTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	95534061	95535982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95534186_95535857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016714	chr3	+	391	2	NIC	ENSMUSG00000038619.13	novel	558	3	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCTTGCCATCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	95534076	95536098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_95534227_95535857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016715	chr3	+	369	3	FSM	ENSMUSG00000038619.13	ENST00000361631.9	628	3	63	196	63	-196	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGGTCAGGAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	95534120	95538838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_95534227_95535851_95536019_95538742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016716	chr3	+	247	1	NIC	ENSMUSG00000038619.13	novel	1130	4	NA	NA	1794	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGCTTGCCATCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	95535851	95536098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_95535900_95536100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016717	chr3	+	690	1	Genic_Genomic	ENSMUSG00000038619.13	novel	NA	NA	NA	NA	4679	13	mono-exon	FALSE	NA	NA	NA	NA	NA	573	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACCTGTTGTGAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	95538736	95539426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_95538700_95539400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016718	chr3	+	1233	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	242	1943	173	410	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTTGGTGACTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	95566340	95568544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_95566799_95567071_95567320_95568017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016719	chr3	+	562	1	ISM	ENSMUSG00000038612.17	ENST00000620947.4	1676	4	2496	0	2326	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCAATCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95568493	95569055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95568500_95569100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016720	chr3	-	517	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	7030	0	7030	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACAGTGTGATAGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	95584950	95584020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95584280_95584420_95584566_95584837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016721	chr3	-	519	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	6663	406	6663	-406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGGTAAAGAGCGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	95585317	95584426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95584566_95584837_95585018_95585117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016722	chr3	-	466	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	4903	909	4903	-909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGTTCCCACCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	95587077	95584929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95585018_95585117_95585316_95586897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016723	chr3	-	511	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	4475	1166	4475	-1166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGCGTGCCTGCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	95587505	95585186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95585316_95586897_95587075_95587300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016724	chr3	-	502	4	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	3865	2956	3865	-2956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCGCCCCCCAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	95588115	95586976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95587075_95587300_95587506_95587754_95587885_95588046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016725	chr3	-	494	4	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	2813	4023	2813	-4023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGGACACCTCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	95589167	95588043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95588121_95588407_95588446_95588569_95588743_95588961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016726	chr3	-	611	4	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	1268	4616	1268	-4616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGGAAGAAGGCAAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	95590712	95588636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95588743_95588961_95589167_95589519_95589657_95590549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016727	chr3	-	643	3	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	638	5564	638	-5564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCAGGATGGAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	95591342	95589584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95589657_95590549_95590721_95590942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016728	chr3	-	645	2	ISM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	48	7146	48	-7146	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCCCAGGGAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	95591932	95591166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95591550_95591670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016729	chr3	-	1011	4	ISM	ENSMUSG00000028108.17	ENSMUST00000029753.14	1895	11	3345	-2	3345	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTTGTCTTTAGTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	95643534	95641457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016730	chr3	-	1001	4	ISM	ENSMUSG00000028108.17	ENSMUST00000029753.14	1895	11	2774	680	2774	-680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGTGAGTGTGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	95644105	95642139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95642223_95642510_95642732_95643158_95643534_95643783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016731	chr3	-	824	4	ISM	ENSMUSG00000028108.17	ENSMUST00000117507.10	1901	11	1853	1700	1851	-1699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGGCATCCCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95645028	95643158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95643534_95643783_95644104_95644324_95644370_95644944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016732	chr3	-	393	4	ISM	ENSMUSG00000028107.15	ENST00000369054.6	1537	12	11820	0	11820	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGGTTAGTCGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	95649992	95648633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95648749_95649385_95649459_95649627_95649730_95649889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016733	chr3	-	467	3	ISM	ENSMUSG00000028107.15	ENST00000369054.6	1537	12	6853	4754	6853	-2223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCCTAGGGGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	95654959	95653387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95653483_95653846_95654010_95654750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016734	chr3	-	673	5	ISM	ENSMUSG00000028107.15	ENSMUST00000074339.13	2313	17	4482	6555	4120	-2678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTGTTCATTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	95657692	95653842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016735	chr3	-	479	4	ISM	ENSMUSG00000028107.15	ENSMUST00000098857.9	3228	11	436	7031	53	-7031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCAGCTCTTCAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95661759	95658195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95658297_95658817_95658943_95660318_95660443_95661630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016736	chr3	-	365	1	Genic_Genomic	ENSMUSG00000015748.14	novel	NA	NA	NA	NA	21207	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGGCAGGTGGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	95737799	95737434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_95737400_95737800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016737	chr3	-	420	2	ISM	ENSMUSG00000015748.14	ENST00000519029.1	1945	14	19072	-218	19072	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCATATGGTCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	95739934	95737919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95738278_95739872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016738	chr3	-	530	3	ISM	ENSMUSG00000015748.14	ENST00000519029.1	1945	14	6463	9868	6463	-9868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGCCCAGCTTAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	95752543	95748005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95748062_95751497_95751665_95752236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016739	chr3	-	387	3	ISM	ENSMUSG00000015748.14	ENST00000519029.1	1945	14	3843	14327	3843	-14327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGGTGGAGCTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	95755163	95752464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95752544_95754686_95754908_95755076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016740	chr3	-	312	1	Genic_Genomic	ENSMUSG00000054312.7	novel	NA	NA	NA	NA	7682	8	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATTGGTCCACAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	95770249	95769937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_95769900_95770200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016741	chr3	-	493	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTTATTGGTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	95778831	95769940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_95770245_95777805_95777928_95778764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016742	chr3	+	449	2	ISM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	1671	880	1671	-880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGACTGGTGGGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	95803037	95803877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95803158_95803548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016743	chr3	+	415	1	Genic_Genomic	ENSMUSG00000015750.16	novel	NA	NA	NA	NA	3835	16	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAGTATATAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	95805201	95805616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_95805200_95805600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016744	chr3	-	222	2	ISM	ENSMUSG00000038526.15	ENST00000647854.1	972	8	5070	-7	5070	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTGAGATCCTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95806654	95806116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95806220_95806535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016745	chr3	-	105	1	NIC	ENSMUSG00000038526.15	novel	1709	11	NA	NA	5503	7	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTGAGATCCTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	95806221	95806116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_95806100_95806200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016746	chr3	-	287	2	ISM	ENSMUSG00000038526.15	ENST00000647854.1	972	8	4822	406	4822	-406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGGCTCAGAAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	95806902	95806529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95806653_95806738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016747	chr3	-	185	2	NNC	ENSMUSG00000038526.15	novel	972	8	NA	NA	4916	-412	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTTGCAGGGCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	95806808	95806535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_95806653_95806740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016748	chr3	-	332	3	ISM	ENSMUSG00000038526.15	ENST00000647854.1	972	8	4380	614	4380	-614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAGTGGAGAGGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	95807344	95806737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95806901_95807051_95807119_95807242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016749	chr3	-	290	3	ISM	ENSMUSG00000038526.15	ENST00000647854.1	972	8	4023	948	4023	-948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATGAAATAAGATACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	95807701	95807071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95807119_95807242_95807339_95807554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016750	chr3	-	317	2	ISM	ENSMUSG00000038526.15	ENST00000647854.1	972	8	3150	1427	3150	-1427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGGAACTCGGGCTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	95808574	95807550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95807698_95808404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016751	chr3	-	273	2	ISM	ENSMUSG00000038526.15	ENST00000647854.1	972	8	3	2296	3	-2296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGGCCATACAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	95811721	95808419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95808585_95811613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016752	chr3	+	1513	6	FSM	ENSMUSG00000015749.13	ENST00000629042.2	1540	6	27	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95836583	95854702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_95836963_95844458_95844508_95845193_95845352_95851618_95851674_95852491_95852884_95854222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016753	chr3	+	798	4	ISM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	20	8370	-6	-8123	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCTTAGTTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	95836609	95844507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016754	chr3	+	851	5	FSM	ENSMUSG00000015749.13	ENST00000533654.5	851	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAAGATTTGCTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	95836764	95852713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95845193_95845352_95852491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016755	chr3	+	662	5	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	-4	2908	-4	-957	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGCTTGGCCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	95841216	95851673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016756	chr3	+	2689	5	ISM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	897	-121	897	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95842117	95854702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016757	chr3	+	494	2	NNC	ENSMUSG00000015749.13	novel	683	6	NA	NA	3972	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTATTTAGATTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	95845192	95852793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_95845385_95852491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016758	chr3	+	613	3	NNC	ENSMUSG00000015749.13	novel	1540	6	NA	NA	4045	-273	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCATCTATTGTGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	95845265	95854308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_95845401_95852491_95852884_95854222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016759	chr3	+	491	1	NIC	ENSMUSG00000015749.13	novel	1540	6	NA	NA	12991	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	95854211	95854702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_95854200_95854700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016760	chr3	-	557	1	ISM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	7016	0	7016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGGCTTCTCACCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	95896297	95895740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95895700_95896300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016761	chr3	-	750	3	ISM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	4452	663	4452	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCTGGGAGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95898861	95896403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_95896946_95898112_95898215_95898755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016762	chr3	+	702	4	ISM	ENSMUSG00000045934.16	ENST00000439741.4	2630	17	6522	1127	6522	-1127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAGATCAGGTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	96075975	96077907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96076082_96076351_96076526_96077122_96077306_96077668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016763	chr3	+	1116	3	ISM	ENSMUSG00000045934.16	ENST00000439741.4	2630	17	7667	-4	7667	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATTTTCTTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	96077120	96079038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96077306_96077668_96077963_96078401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016764	chr3	+	637	1	NIC	ENSMUSG00000045934.16	novel	2778	17	NA	NA	8944	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTATTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96078397	96079034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_96078400_96079000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016765	chr3	+	1614	5	ISM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	667	-3	667	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATGGGCACAGGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	96080314	96084883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016766	chr3	-	200	1	FSM	ENSMUSG00000068855.4	ENSMUST00000090782.4	520	1	320	0	320	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACTTTGGTGGCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	96127876	96127676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_96127700_96127900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016767	chr3	+	1959	1	FSM	ENSMUSG00000093577.2	ENSMUST00000176760.2	2427	1	470	-2	470	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGACTCTTCTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96147178	96149137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_96147200_96149100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016768	chr3	-	3212	1	FSM	ENSMUSG00000093656.2	ENSMUST00000177363.2	3215	1	4	-1	4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCCGTCTGAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	96177601	96174389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_96174400_96177600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016769	chr3	+	1052	2	FSM	ENSMUSG00000038403.11	ENST00000475797.1	1285	2	-3	236	-3	-236	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAAGCCTAGAGATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	96432493	96436278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_96432647_96435379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016770	chr3	+	307	3	FSM	ENSMUSG00000038403.11	ENST00000497365.5	1322	3	24	991	24	-991	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAACCTTGGGAGTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	96432520	96435523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_96432647_96434350_96434388_96435379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016771	chr3	+	935	1	ISM	ENSMUSG00000038403.11	ENSMUST00000049208.11	2028	4	3094	10	3085	2	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTCTCCATCCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	96435581	96436516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96435600_96436500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016772	chr3	+	1149	1	ISM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	2761	17	2758	9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTTCTTGTCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	96468033	96469182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96468000_96469200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016773	chr3	-	1093	6	ISM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	12408	68	484	-68	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGGAACAGTCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	96489089	96485255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016774	chr3	-	637	6	FSM	ENSMUSG00000028104.15	ENST00000369313.7	633	6	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCATAGACTGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	96489573	96485812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488959_96489090_96489403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016775	chr3	-	629	6	NNC	ENSMUSG00000028104.15	novel	633	6	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGCATAGACTGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	96489573	96485813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_96485905_96487113_96487221_96487331_96487406_96487765_96487823_96488959_96489090_96489403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016776	chr3	+	997	3	ISM	ENSMUSG00000038374.11	ENSMUST00000200647.2	2620	5	675	1374	675	-1374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAAACCCAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	96538187	96539733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96538319_96538747_96538885_96539004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016777	chr3	+	737	1	ISM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	3122	0	2858	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTATTCCTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	96540370	96541107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96540400_96541100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016778	chr3	+	405	3	ISM	ENSMUSG00000028102.16	ENSMUST00000048766.15	1122	5	-139	7518	103	-7518	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATCACTGTCAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	96542848	96544524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96543060_96543989_96544106_96544446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016779	chr3	+	1472	3	ISM	ENSMUSG00000028102.16	ENSMUST00000165842.3	1562	4	839	0	839	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	96543987	96552042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96544106_96544446_96544649_96550890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016780	chr3	+	402	1	Genic_Genomic	ENSMUSG00000028102.16	novel	NA	NA	NA	NA	9133	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTCAGAAAGGGTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	96552281	96552683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_96552300_96552700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016781	chr3	+	1185	4	ISM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	9169	-2	9169	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGACAATTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	96565514	96571167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96565603_96569139_96569236_96569910_96570025_96570280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016782	chr3	+	889	1	NIC	ENSMUSG00000090210.8	novel	5035	30	NA	NA	13933	2	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGACAATTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	96570278	96571167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_96570300_96571200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016783	chr3	+	681	2	ISM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	7229	485	7229	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCCATTCCGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96611661	96612804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96611703_96612164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016784	chr3	+	755	1	Genic_Genomic	ENSMUSG00000028101.19	novel	NA	NA	NA	NA	8200	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTTTATTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	96612632	96613387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_96612600_96613400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016785	chr3	-	520	1	Genic_Genomic	ENSMUSG00000028100.12	novel	NA	NA	NA	NA	2457	2	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGCCCGACTGTATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	96613366	96612846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_96612800_96613400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016786	chr3	-	887	4	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	1261	0	1261	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCGCCCGACTGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	96614562	96612848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_96613367_96613657_96613845_96614225_96614363_96614517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016787	chr3	-	567	4	ISM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	9	1668	9	-1033	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTGGCGGTAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	96615814	96614516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_96614617_96614873_96614967_96615288_96615492_96615643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016788	chr3	-	236	1	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	2322	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGGTGTGTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	96630974	96630738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_96630700_96631000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016789	chr3	+	451	4	ISM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	47966	5128	47966	-5128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTACTTTCATATTT	NA	NA	NA	NA	NA	NA	NA	NA	96682945	96693340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96683158_96690963_96691036_96692308_96692382_96693246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016790	chr3	+	601	3	ISM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	58265	889	58265	-889	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCAGTTTTCTCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	96693244	96697579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96693341_96695885_96696002_96697190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016791	chr3	+	412	1	Genic_Genomic	ENSMUSG00000028098.14	novel	NA	NA	NA	NA	63078	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTCAGCGTCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	96698057	96698469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_96698100_96698500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016792	chr3	+	466	2	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	1	17407	1	-17407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTGGGGTGAGGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	96757541	96759058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96757756_96758806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016793	chr3	+	312	2	NNC	ENSMUSG00000038298.15	novel	1096	5	NA	NA	36	-17521	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACCGGGCCCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	96757576	96758944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_96757760_96758815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016794	chr3	+	677	3	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	1264	614	1264	-614	internal_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTAGTTCTGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	96758804	96775851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96759057_96764510_96764708_96775623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016795	chr3	+	464	3	ISM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	7138	-1	7138	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCCTGGTGGCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	96764678	96776466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96764708_96775623_96775849_96776256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016796	chr3	-	132	1	Genic_Genomic	ENSMUSG00000028096.14	novel	NA	NA	NA	NA	29027	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGCAATTACACGTC	NA	NA	NA	NA	NA	NA	NA	NA	96775727	96775595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_96775600_96775700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016797	chr3	+	217	1	NIC	ENSMUSG00000038298.15	novel	2406	9	NA	NA	18709	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCCTGGTGGCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	96776249	96776466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_96776200_96776500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016798	chr3	-	216	3	ISM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	11777	22601	3869	-19495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGTGACGCTCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	96800885	96798197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_96798240_96800181_96800284_96800813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016799	chr3	+	1605	1	ISM	ENSMUSG00000057123.15	ENSMUST00000199597.2	3668	4	171119	0	43396	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGGTTCAGGTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96983127	96984732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_96983100_96984700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016800	chr3	-	1936	1	ISM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	21766	1	10909	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAACTGCCTTTTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	97112914	97110978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_97111000_97112900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016801	chr3	-	3600	3	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	6564	-523	6564	-407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCCTTCAGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	97117259	97111420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_97113294_97114462_97114724_97115793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016802	chr3	-	2285	3	ISM	ENSMUSG00000038256.16	ENST00000683836.1	6055	10	87517	2154	6096	-1224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGGACCCAGCATACCT	NA	NA	NA	NA	NA	NA	NA	NA	97117727	97113167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_97113258_97114462_97114724_97115793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016803	chr3	-	2120	3	ISM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	2672	4220	2672	-4220	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGATATATCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	97121151	97116163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_97118033_97120187_97120288_97121000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016804	chr3	-	174	1	Genic_Genomic	ENSMUSG00000028089.6	novel	NA	NA	NA	NA	23012	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTATGTTGCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97468229	97468055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_97468100_97468200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016805	chr3	-	799	1	Genic_Genomic	ENSMUSG00000038170.16	novel	NA	NA	NA	NA	38130	1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGTGTCCAGATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	97637195	97636396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_97636400_97637200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016806	chr3	-	840	2	ISM	ENSMUSG00000038170.16	ENST00000313431.13	5383	19	37158	758	37092	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATTAGCTGCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	97638233	97637157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_97637907_97638142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016807	chr3	-	992	3	ISM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	796	18678	796	-18678	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGGCTACGTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	97674529	97664847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_97664968_97666114_97666247_97673789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016808	chr3	-	602	5	FSM	ENSMUSG00000038170.16	ENST00000464103.5	600	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGCCTTTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97731977	97700436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_97700637_97700800_97700925_97704047_97704125_97731530_97731642_97731887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016809	chr3	-	616	5	FSM	ENSMUSG00000038170.16	ENST00000612320.1	616	5	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTGTTTTTGGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	97751027	97700460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_97700637_97700800_97700925_97731530_97731642_97748949_97749102_97750974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016810	chr3	+	1836	4	ISM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	6028	746	5991	-746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTTATGAAGGACACCT	NA	NA	NA	NA	NA	NA	NA	NA	97814533	97829846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_97814647_97819894_97820056_97821815_97821963_97828431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016811	chr3	+	1460	1	Genic_Genomic	ENSMUSG00000027879.10	novel	NA	NA	NA	NA	20591	1	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTGTGAAGTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	97829133	97830593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_97829100_97830600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016812	chr3	+	913	4	FSM	ENSMUSG00000027878.12	ENST00000593495.3	915	4	3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGAGCTCTCTCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	97920845	97980239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_97921088_97955051_97955126_97978175_97978436_97979902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016813	chr3	+	657	3	NNC	ENSMUSG00000027878.12	novel	915	4	NA	NA	34203	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGCTCTCTCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	97955056	97980238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_97955126_97978183_97978436_97979902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016814	chr3	+	783	1	Genic_Genomic	ENSMUSG00000027878.12	novel	NA	NA	NA	NA	136042	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGATAGCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	98056895	98057678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_98056900_98057700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016815	chr3	+	611	2	FSM	ENSMUSG00000050064.15	ENST00000400451.7	605	2	1	-7	1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCGGGCTGTGGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98335063	98335874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_98335303_98335502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016816	chr3	+	366	1	ISM	ENSMUSG00000050064.15	ENSMUST00000056096.15	5166	3	45705	3400	439	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAAATGCGCGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98335501	98335867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_98335500_98335900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016817	chr3	+	585	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACCTGCTTTCCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	98729291	98729876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_+_98729300_98729900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016818	chr3	-	269	1	ISM	ENSMUSG00000105689.2	ENSMUST00000196228.2	667	3	6319	0	6319	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTGTTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	99162282	99162013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_99162000_99162300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016819	chr3	+	185	2	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	16632	19260	16632	-14523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAGGAGATATTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	100093934	100095263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_100094046_100095189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016820	chr3	+	989	3	ISM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	32035	481	32035	-255	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGTATGTAACAGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	100109337	100114042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_100109434_100113087_100113480_100113541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016821	chr3	+	524	1	Genic_Genomic	ENSMUSG00000027865.11	novel	NA	NA	NA	NA	36698	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTATAGGCTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	100114000	100114524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_100114000_100114500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016822	chr3	+	187	2	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	44	85143	44	-82240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATGGACTTTTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	101284442	101285232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101284519_101285121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016823	chr3	+	166	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	41	34654	41	-34654	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGAGCTCCCACATCA	NA	NA	NA	NA	NA	NA	NA	NA	101285694	101332818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101285809_101332766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016824	chr3	+	250	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	47344	33024	47344	-33024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCCACCTCTCGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	101332997	101334448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101333145_101334345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016825	chr3	+	137	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	49044	28875	49044	-28875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGCTCAGAACATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	101334697	101338597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101334757_101338519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016826	chr3	+	175	2	ISM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	54443	27622	53188	-24719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGGTCATCTGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	101338841	101342753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101338910_101342646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016827	chr3	+	232	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	57277	20668	57277	-20668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATGGAGGTTCCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	101342930	101346804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101343049_101346690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016828	chr3	+	142	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	61387	9186	61387	-9186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGCCCGAACTCGCAC	NA	NA	NA	NA	NA	NA	NA	NA	101347040	101358286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101347096_101358199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016829	chr3	+	179	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	72859	4971	72859	-4971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCGCACCAGCGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	101358512	101362501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101358611_101362420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016830	chr3	+	142	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	77111	2456	77111	-2456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCGATCGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	101362764	101365016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101362829_101364938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016831	chr3	+	208	2	ISM	ENSMUSG00000042035.12	ENSMUST00000195164.2	3876	11	79694	239	79694	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTCAGAGGGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	101365347	101367233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_101365425_101367102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016832	chr3	+	132	1	Genic_Genomic	ENSMUSG00000042035.12	novel	NA	NA	NA	NA	84595	5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCACATGCTGAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	101370248	101370380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_101370200_101370400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016833	chr3	-	492	3	ISM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	26845	0	26845	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGATGTCATGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	101804602	101787318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_101787504_101790775_101790906_101804425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016834	chr3	-	833	5	ISM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	8607	0	8607	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGATGTCATGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	101822840	101787318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_101787504_101790775_101790906_101804425_101804591_101805252_101805386_101822620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016835	chr3	-	609	4	ISM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	3	17106	3	-17106	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTTCACTTTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	101831444	101804424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_101804591_101805252_101805386_101822620_101822834_101831347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016836	chr3	+	752	1	ISM	ENSMUSG00000027861.14	ENSMUST00000029454.12	2556	11	59348	0	59217	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGAGGCTATCTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	102053078	102053830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102053100_102053800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016837	chr3	+	794	2	FSM	ENSMUSG00000027859.11	ENST00000681124.1	945	2	-1	152	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGACTTGCCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	102421269	102428157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_102421396_102427489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016838	chr3	+	711	1	ISM	ENSMUSG00000027859.11	ENSMUST00000106925.9	1187	4	50360	15	6333	3	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTGTATACCGACACTT	NA	NA	NA	NA	NA	NA	NA	NA	102427603	102428314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102427600_102428300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016839	chr3	-	389	3	ISM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	89174	-7	89174	7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATGAAGAGCTAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	102752405	102727847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_102727999_102748177_102748358_102752347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016840	chr3	-	381	4	ISM	ENSMUSG00000027855.14	ENST00000613524.4	2396	25	80034	24492	80034	-24492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTTTATGCCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	102761545	102752346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_102752405_102759434_102759528_102760703_102760815_102761426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016841	chr3	-	354	4	ISM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	69127	32849	69127	-32849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAACAATATAATAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	102772452	102760703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_102760815_102761426_102761544_102772172_102772236_102772389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016842	chr3	+	1013	5	FSM	ENSMUSG00000027854.13	ENST00000369528.9	1240	5	110	117	110	101	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGGGGTTTGATCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102903232	102909611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_102903295_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016843	chr3	+	637	1	ISM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	6069	6046	5970	1	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTCGCGTTGCTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	102909092	102909729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102909100_102909700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016844	chr3	+	387	1	Genic_Genomic	ENSMUSG00000027854.13	novel	NA	NA	NA	NA	12267	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGAAACCGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102915389	102915776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_102915400_102915800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016845	chr3	+	800	3	ISM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	-149	19136	32	-18294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATGGCAACCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	102927773	102946171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102927986_102936104_102936529_102946007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016846	chr3	+	346	2	ISM	ENSMUSG00000068823.11	ENSMUST00000199420.5	4185	20	15960	19298	15909	-18261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAATCTGTCAGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	102943888	102946204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102944038_102946007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016847	chr3	+	1583	4	ISM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	34047	0	33990	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACAATGACAAGGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102961969	102965307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102962150_102962664_102962829_102963660_102963794_102964201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016848	chr3	+	980	1	ISM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	36781	0	36543	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	102964522	102965502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102964500_102965500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016849	chr3	+	1672	5	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	2009	2421	1927	1094	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTATTATTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	102967609	102972809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016850	chr3	+	1288	1	ISM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	8342	0	8260	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCTACTGCCATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102973942	102975230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_102973900_102975200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016851	chr3	+	971	5	ISM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	1620	192	1620	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAATATGTTTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	103080590	103086276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016852	chr3	+	653	1	Genic_Genomic	ENSMUSG00000005687.15	novel	NA	NA	NA	NA	6862	17	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTTAATCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	103085832	103086485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_103085800_103086500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016853	chr3	+	1179	3	ISM	ENSMUSG00000027849.20	ENSMUST00000121834.8	1710	7	43	43151	2	-39761	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTACAGGCCTCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	103482589	103495111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103482857_103492657_103493007_103494548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016854	chr3	+	719	3	ISM	ENSMUSG00000027849.20	ENSMUST00000118117.8	1856	6	9521	6642	9521	-6642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTCCGGGGTTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	103492978	103528230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103493007_103494548_103495111_103528101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016855	chr3	+	924	5	ISM	ENSMUSG00000027849.20	ENST00000641643.2	2924	8	12090	2730	11220	23	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTACCTGGTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	103494677	103538285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103495111_103528101_103528223_103532812_103532985_103534297_103534428_103538217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016856	chr3	+	839	4	ISM	ENSMUSG00000027849.20	ENST00000641643.2	2924	8	50312	697	49442	484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAATTATTCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	103532899	103540318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103532985_103534297_103534428_103538217_103538286_103539762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016857	chr3	+	608	1	ISM	ENSMUSG00000027849.20	ENST00000641643.2	2924	8	57820	0	56950	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGACTGTATTTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	103540407	103541015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103540400_103541000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016858	chr3	-	1362	3	FSM	ENSMUSG00000027848.13	ENSMUST00000029440.10	5465	3	99	4004	99	-3989	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTTTAGAACTGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	103645218	103642984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_103643980_103644267_103644554_103645137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016859	chr3	-	1250	1	ISM	ENSMUSG00000008730.18	ENSMUST00000118317.8	7939	16	50499	0	50011	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTGGTTTCAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	103648380	103647130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_103647100_103648400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016860	chr3	-	1791	3	FSM	ENSMUSG00000027845.16	ENST00000650596.1	1785	3	-2	-4	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGCGTAGCAGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	103716800	103710331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_103711372_103715387_103715554_103716215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016861	chr3	-	1773	3	NNC	ENSMUSG00000027845.16	novel	1785	3	NA	NA	2	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTACAGCGTAGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	103716796	103710335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_103711362_103715387_103715554_103716215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016862	chr3	+	654	2	ISM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	2	9715	2	-9451	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTTCGATACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	103716945	103719626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103717374_103719400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016863	chr3	+	454	2	ISM	ENSMUSG00000032952.12	ENSMUST00000106824.8	2412	9	3713	6652	3470	-6585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCCCACTACATCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	103720621	103722492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103720724_103722140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016864	chr3	+	686	4	ISM	ENSMUSG00000032952.12	ENSMUST00000200377.5	1823	7	7917	801	7917	-801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGAGTGTTTACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	103725068	103728276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103725160_103726119_103726224_103727569_103727778_103727993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016865	chr3	+	461	2	ISM	ENSMUSG00000032952.12	ENSMUST00000200377.5	1823	7	10839	250	10839	-250	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGGCTCTAAAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	103727990	103728827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103728276_103728651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016866	chr3	+	431	1	NIC	ENSMUSG00000105053.2	novel	3144	14	NA	NA	12022	-16623	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	103728910	103729341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_103728900_103729300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016867	chr3	+	243	1	ISM	ENSMUSG00000058388.15	ENSMUST00000055425.15	3060	18	38880	0	38802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	103914563	103914806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_103914600_103914800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016868	chr3	+	434	2	ISM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	12300	5349	12300	-5349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGACTTGTCGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	104558283	104560429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_104558346_104560057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016869	chr3	+	388	1	Genic_Genomic	ENSMUSG00000032902.2	novel	NA	NA	NA	NA	19408	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATTACTTGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	104565391	104565779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_104565400_104565800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016870	chr3	-	211	1	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTAGCTATTAAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	104659981	104659770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_-_104659800_104660000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016871	chr3	-	352	2	FSM	ENSMUSG00000105195.2	ENST00000369630.7	342	2	-8	-2	-8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACGGGTGGCTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	104680516	104679491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_104679683_104680355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016872	chr3	-	338	2	NNC	ENSMUSG00000105195.2	novel	342	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGACGGGTGGCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	104680508	104679492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_104679678_104680355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016873	chr3	-	337	2	NNC	ENSMUSG00000105195.2	novel	342	2	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGACGGGTGGCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	104680509	104679492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_104679683_104680362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016874	chr3	+	326	2	Antisense	novelGene_ENSMUSG00000055865.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGACTGATGCAGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	104679492	104680500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_+_104679685_104680366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016875	chr3	+	590	3	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	728	2781	728	-2781	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAATACTTAAGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	104689140	104690553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_104689499_104689916_104690038_104690442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016876	chr3	+	375	4	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	2025	1890	2025	-1890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAGGGGCTAAAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	104690437	104691444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_104690554_104690670_104690731_104690969_104691083_104691358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016877	chr3	+	378	4	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	2258	1265	2258	-1265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCCCTCAGAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	104690670	104692069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_104690731_104690969_104691083_104691358_104691444_104691949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016878	chr3	+	370	4	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	3613	466	3613	-466	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGCCTGGCAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	104692025	104692868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_104692069_104692271_104692336_104692501_104692610_104692713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016879	chr3	+	547	3	ISM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	4119	0	4119	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	104692531	104693334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_104692610_104692713_104692866_104693017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016880	chr3	+	322	1	Genic_Genomic	ENSMUSG00000002228.8	novel	NA	NA	NA	NA	4601	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATTATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	104693013	104693335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_104693000_104693300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016881	chr3	+	1202	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCAGCTTCCTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	104696204	104701776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016882	chr3	+	1080	5	NNC	ENSMUSG00000002233.14	novel	1202	5	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	104696319	104701775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_104696400_104699210_104699369_104699880_104700002_104700215_104700347_104701185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016883	chr3	+	1307	1	ISM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	64255	0	63691	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCCTGCTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	104836073	104837380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_104836100_104837400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016884	chr3	-	1444	1	ISM	ENSMUSG00000062127.12	ENSMUST00000077548.12	4946	6	49788	0	49593	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGGGGGAAAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	104910674	104909230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_104909200_104910700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016885	chr3	-	1516	2	ISM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	44894	2806	44894	-2806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCTGCTCCCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	104915373	104912038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_104913445_104915263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016886	chr3	+	703	1	FSM	ENSMUSG00000105753.2	ENSMUST00000200070.2	1940	1	1278	-41	1278	41	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGGGACTTATAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	105411500	105412203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_105411500_105412200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016887	chr3	-	605	1	ISM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	8700	0	8700	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTTATTCTGTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	105586190	105585585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_105585600_105586200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016888	chr3	-	1336	1	Genic_Genomic	ENSMUSG00000068798.11	novel	NA	NA	NA	NA	72685	2	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCCCTTCTCTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	105635916	105634580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_105634600_105635900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016889	chr3	-	1701	4	ISM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	61682	398	61631	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTACAAAGGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	105646970	105634980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016890	chr3	-	984	5	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	4056	0	4056	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAGTTTCATACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	105863359	105850013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016891	chr3	-	1037	5	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	539	-1007	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTCTGTACAGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	105866876	105851020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016892	chr3	-	997	6	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	539	1058	539	-1058	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAGGAGGAAGAACACAT	NA	NA	NA	NA	NA	NA	NA	NA	105866876	105851071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016893	chr3	-	906	5	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	9	11337	9	-11337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAACTTAATGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	105867406	105861350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_105861498_105863211_105863358_105866177_105866215_105866463_105866875_105867241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016894	chr3	+	1964	4	NNC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	5716	-878	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAGGTAACACTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	105872400	105876198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_105872469_105873080_105873190_105873672_105873740_105874478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016895	chr3	+	1906	3	ISM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	6411	855	6411	-855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATCGTTGAAAAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	105873095	105876221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_105873190_105873672_105873742_105874478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016896	chr3	+	1770	1	Genic_Genomic	ENSMUSG00000000561.15	novel	NA	NA	NA	NA	8628	6	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTGTTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105875312	105877082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_105875300_105877100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016897	chr3	+	395	1	FSM	ENSMUSG00000092072.4	ENSMUST00000170669.4	429	1	38	-4	38	4	mono-exon	FALSE	NA	NA	NA	NA	NA	363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTATTCAAAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	105942017	105942412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_105942000_105942400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016898	chr3	+	298	3	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	10	3446	10	-3446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACCCTACAGAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	106028962	106035891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106029011_106035465_106035591_106035766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016899	chr3	+	300	2	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	6813	3012	6813	-3012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTATGAGGTCAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	106035765	106036325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106035891_106036150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016900	chr3	+	452	3	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	7197	1052	7197	-1052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGCATTAGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106036149	106038285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106036337_106037934_106038055_106038140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016901	chr3	+	247	2	NNC	ENSMUSG00000062778.13	novel	1004	7	NA	NA	7251	-1293	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTTAAGGTAAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	106036203	106038044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_106036341_106037934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016902	chr3	+	302	2	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	9185	92	9185	-92	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGCATCAATGGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	106038137	106039245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106038283_106039088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016903	chr3	+	225	1	ISM	ENSMUSG00000062778.13	ENSMUST00000079132.12	1681	11	18571	96	10163	3	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCTTCCAGAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	106039115	106039340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106039100_106039300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016904	chr3	-	1426	1	FSM	ENSMUSG00000091575.3	ENSMUST00000164330.2	1425	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGTGGGATTAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	106390753	106389327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_106389300_106390800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016905	chr3	-	1373	1	Genic_Genomic	ENSMUSG00000040774.16	novel	NA	NA	NA	NA	43951	1	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTTTCATCACAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106410947	106409574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_106409600_106410900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016906	chr3	-	1093	4	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	41729	87	41729	-87	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTTGGGAAATCTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	106413169	106410385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016907	chr3	-	698	3	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	7985	28154	7985	-28154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAATACTTAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	106446913	106438452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_106438595_106440670_106440819_106446505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016908	chr3	-	618	3	ISM	ENSMUSG00000040774.16	ENST00000357172.9	2155	9	29	30474	-4	-30365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTTTAATGCTGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	106455051	106440663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_106440819_106446505_106446913_106454995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016909	chr3	+	2070	3	ISM	ENSMUSG00000027900.16	ENSMUST00000029507.13	1891	7	18171	-564	18171	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTATGGGAAGCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	106473358	106482725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106473501_106480288_106480382_106480890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016910	chr3	+	2158	4	ISM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	22826	-530	22818	-515	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTAATAGAGAAATATAG	NA	NA	NA	NA	NA	NA	NA	NA	106478005	106482691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106478187_106478926_106479010_106480288_106480382_106480890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016911	chr3	+	1948	1	Genic_Genomic	ENSMUSG00000027900.16	novel	NA	NA	NA	NA	26076	5	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGTTTTAATTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	106481263	106483211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_106481300_106483200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016912	chr3	+	1601	1	FSM	ENSMUSG00000103053.2	ENSMUST00000192296.2	1603	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCCTTCTTCCAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	106496577	106498178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_106496600_106498200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016913	chr3	+	661	2	ISM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	111	4311	111	-3641	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAATACCAACAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	106629362	106639579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106629423_106638978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016914	chr3	+	1376	2	ISM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	12421	77	12421	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATTTGATATTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	106641672	106643813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106641956_106642720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016915	chr3	+	1145	1	ISM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	13540	0	13497	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	106642748	106643893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_106642700_106643900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016916	chr3	-	628	1	ISM	ENSMUSG00000040747.10	ENSMUST00000038845.10	1742	8	29599	2	29599	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTGACTCATTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	106667866	106667238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_106667200_106667900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016917	chr3	+	874	4	FSM	ENSMUSG00000087260.6	ENSMUST00000145735.6	881	4	10	-3	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107186183	107191398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016918	chr3	+	939	4	ISM	ENSMUSG00000027896.16	ENST00000437429.6	1472	6	70	10833	-31	-6494	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGAACTTAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	107198599	107208539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_107198737_107199723_107199842_107206435_107206598_107208017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016919	chr3	+	1339	6	FSM	ENSMUSG00000027896.16	ENST00000472422.6	1340	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTAGATTTCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	107199782	107219372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_107199842_107205260_107205394_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016920	chr3	+	1459	7	FSM	ENSMUSG00000027896.16	ENST00000369779.9	1484	7	25	0	25	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTAGATTTCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	107199806	107219372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_107199842_107205260_107205394_107206151_107206296_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016921	chr3	+	266	3	ISM	ENSMUSG00000027896.16	ENSMUST00000029502.14	2248	9	11989	562	10753	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTGACCTTCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	107210534	107218869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_107210589_107211726_107211821_107218751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016922	chr3	-	1619	3	FSM	ENSMUSG00000048109.11	ENST00000369784.9	3341	3	1703	19	1678	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTCTTTTGAGGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	107238702	107233275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_107233621_107234291_107234394_107237530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016923	chr3	-	1500	2	FSM	ENSMUSG00000048109.11	ENST00000650953.2	3083	2	1583	0	1583	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTGTTTTATTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	107238797	107233300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_107233621_107237617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016924	chr3	-	1629	1	ISM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	31812	0	19148	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTAGTCGTGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	107572064	107570435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107570400_107572100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016925	chr3	-	1296	1	Genic_Genomic	ENSMUSG00000014599.11	novel	NA	NA	NA	NA	8637	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGAAAACTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107649658	107648362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_107648400_107649700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016926	chr3	-	1288	3	ISM	ENSMUSG00000014599.11	ENSMUST00000120654.8	821	6	3819	-1043	3819	-923	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATCTCTATACTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	107654476	107649286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107650462_107654041_107654101_107654422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016927	chr3	+	341	2	ISM	ENSMUSG00000004032.11	ENSMUST00000169365.2	810	7	1917	0	1917	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAACTGGTGTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107805479	107805994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_107805593_107805766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016928	chr3	-	284	1	ISM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	4619	0	4232	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	NA	NA	NA	NA	NA	NA	NA	NA	107846446	107846162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107846200_107846400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016929	chr3	-	183	1	ISM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	4569	0	4476	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	107889200	107889017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107889000_107889200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016930	chr3	-	234	2	ISM	ENSMUSG00000040562.13	ENSMUST00000066530.7	854	8	2318	65	2318	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCTGGCCCTAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	107891358	107889327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107889455_107891251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016931	chr3	-	202	2	ISM	ENSMUSG00000040562.13	ENSMUST00000066530.7	854	8	2136	1994	2136	-1994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGATGCCCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	107891540	107891256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107891363_107891444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016932	chr3	-	199	2	ISM	ENSMUSG00000040562.13	ENSMUST00000066530.7	854	8	1211	2180	1211	-2180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAGGGGGTGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	107892465	107891442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107891541_107892364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016933	chr3	-	219	3	ISM	ENSMUSG00000040562.13	ENSMUST00000066530.7	854	8	258	3297	258	-3297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGGCTGGCTGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	107893418	107892559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107892645_107892933_107892999_107893349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016934	chr3	-	176	2	ISM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	4	4324	4	-4079	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTTTCTCAGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	107893765	107893341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107893426_107893673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016935	chr3	-	1289	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107925289	107919570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016936	chr3	-	618	1	ISM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	11612	336	7552	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGGCCCACTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	107982331	107981713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107981700_107982300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016937	chr3	-	812	3	ISM	ENSMUSG00000027889.18	ENST00000369840.7	3089	18	9684	240	6853	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTCAGTGTCCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	107983030	107981953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107982438_107982564_107982676_107982813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016938	chr3	-	191	2	ISM	ENSMUSG00000027889.18	ENST00000528454.5	2645	18	6473	764	6473	-764	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCTGTTCCTCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	107983410	107982953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107983021_107983286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016939	chr3	-	421	3	ISM	ENSMUSG00000027889.18	ENST00000528454.5	2645	18	5107	1738	5107	-1738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGGTGGTGGCATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	107984776	107983927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107984056_107984334_107984499_107984647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016940	chr3	-	493	3	ISM	ENSMUSG00000027889.18	ENST00000528454.5	2645	18	4819	2145	4819	-2145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCCTTGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	107985064	107984334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107984499_107984647_107984780_107984867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016941	chr3	-	178	2	ISM	ENSMUSG00000027889.18	ENST00000528454.5	2645	18	3491	3848	3491	-3848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGAAAGTGCCACACCG	NA	NA	NA	NA	NA	NA	NA	NA	107986392	107986037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_107986126_107986302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016942	chr3	-	1603	1	Genic_Genomic	ENSMUSG00000000001.5	novel	NA	NA	NA	NA	37269	5	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTATTTGTCTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108016193	108014590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_108014600_108016200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016943	chr3	-	2177	5	ISM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	30255	483	30255	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAAAGAAGGTTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	108023207	108015078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016944	chr3	-	1705	2	ISM	ENSMUSG00000046793.9	ENST00000618721.4	2776	3	3948	-1	3928	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTAATATCAACACT	NA	NA	NA	NA	NA	NA	NA	NA	108058270	108055986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108056489_108057067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016945	chr3	-	1287	2	FSM	ENSMUSG00000046793.9	ENSMUST00000062028.8	3686	2	-13	2412	7	-2061	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCAGCTTTTTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108062211	108058048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_108059260_108062135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016946	chr3	-	154	1	NIC	ENSMUSG00000048997.18	novel	2540	11	NA	NA	8087	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	108109691	108109537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_108109500_108109700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016947	chr3	-	247	2	ISM	ENSMUSG00000048997.18	ENST00000459635.2	2540	11	7250	17	7192	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTAAAATACCTCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	108110586	108109554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108109690_108110474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016948	chr3	-	249	2	ISM	ENSMUSG00000048997.18	ENSMUST00000119650.8	2274	10	5845	1676	5841	-1676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCATACCCCCCGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	108111937	108111231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108111360_108111816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016949	chr3	-	246	2	ISM	ENSMUSG00000048997.18	ENSMUST00000119650.8	2274	10	5628	2260	5624	-2260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTCATGTTCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108112154	108111815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108111939_108112031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016950	chr3	-	268	2	ISM	ENSMUSG00000048997.18	ENSMUST00000119650.8	2274	10	4694	2548	4690	-2548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGGATATCTGATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	108113088	108112103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108112231_108112947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016951	chr3	-	204	2	ISM	ENSMUSG00000048997.18	ENSMUST00000119650.8	2274	10	4158	3525	4154	-3525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAGCCAGCTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	108113624	108113080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108113202_108113541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016952	chr3	-	254	2	ISM	ENSMUSG00000048997.18	ENSMUST00000119650.8	2274	10	3473	3986	3469	-3986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCCCATCTCTCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	108114309	108113541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108113625_108114138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016953	chr3	-	256	2	ISM	ENSMUSG00000048997.18	ENSMUST00000119650.8	2274	10	2931	4756	2927	-4756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACTCCCCTGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108114851	108114311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108114426_108114709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016954	chr3	-	228	2	ISM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	2393	5256	2393	-5244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCACCAAAACCTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	108115385	108114799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108114921_108115278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016955	chr3	-	307	3	ISM	ENSMUSG00000048997.18	ENSMUST00000117409.8	2321	11	6	5741	6	-5723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGCACCCTAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	108117796	108115278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108115384_108115755_108115822_108117660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016956	chr3	+	570	3	NNC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	-1	-14629	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATAGGTGAGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	108164240	108172499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_108164626_108169001_108169069_108172381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016957	chr3	+	750	5	ISM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	0	12074	0	-11912	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTAGTTCTGATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	108164241	108175216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016958	chr3	+	397	3	ISM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	192	14767	192	-14605	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCTATAGGATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	108164433	108172523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108164622_108169001_108169069_108172381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016959	chr3	+	435	5	ISM	ENSMUSG00000068749.10	ENST00000538610.5	725	9	3652	11719	3652	-11719	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACCATTTCCCACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	108168997	108175409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016960	chr3	+	443	5	ISM	ENSMUSG00000068749.10	ENST00000538610.5	725	9	7034	10906	7034	-10906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGCAAGAAGTTTACCA	NA	NA	NA	NA	NA	NA	NA	NA	108172379	108176222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016961	chr3	+	667	6	ISM	ENSMUSG00000068749.10	ENST00000538610.5	725	9	8401	-162	8401	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGTCTGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	108173746	108187290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016962	chr3	+	425	3	NNC	ENSMUSG00000068749.10	novel	1239	9	NA	NA	10799	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGTCTGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	108176144	108187290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_108176247_108179606_108179694_108187054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016963	chr3	+	596	3	ISM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	1198	1571	1178	-1571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCATCCCCAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	108292352	108293924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108292725_108293608_108293724_108293815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016964	chr3	+	419	3	ISM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	2705	473	2685	-473	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAGAGATGGGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108293859	108295022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108294053_108294593_108294712_108294914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016965	chr3	+	506	1	Genic_Genomic	ENSMUSG00000068744.13	novel	NA	NA	NA	NA	3868	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTCTCAGACATAGGC	NA	NA	NA	NA	NA	NA	NA	NA	108295042	108295548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_108295000_108295500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016966	chr3	-	3220	8	ISM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	10986	1	10926	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGGTGTGGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	108341528	108332181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016967	chr3	-	370	1	ISM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	18242	1722	18182	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAGACTTGAACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	108334272	108333902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108333900_108334300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016968	chr3	-	544	4	ISM	ENSMUSG00000068739.14	ENST00000369923.4	1860	12	16806	212	16806	-187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCCCAGGCCTGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108335648	108334114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016969	chr3	-	341	3	ISM	ENSMUSG00000068739.14	ENST00000369923.4	1860	12	16424	1272	16424	-1247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTGTAAGCTCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108336030	108335174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108335249_108335489_108335648_108335921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016970	chr3	-	342	3	ISM	ENSMUSG00000068739.14	ENST00000369923.4	1860	12	9170	6475	9170	-6450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGGAGCCGTGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108343284	108340377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108340478_108341364_108341524_108343201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016971	chr3	-	376	4	ISM	ENSMUSG00000068739.14	ENST00000369923.4	1860	12	78	7461	78	-7436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTGGGGCTGGGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	108352376	108341363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108341524_108343201_108343283_108344824_108344892_108352308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016972	chr3	-	681	4	ISM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	66827	5994	66827	-5994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGGCTACAAGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	108376966	108371631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108371752_108372921_108373096_108375068_108375333_108376843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016973	chr3	-	2750	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	108469484	108463740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_108466277_108467502_108467635_108469402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016974	chr3	-	157	2	ISM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	137	3796	137	-3796	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAAGGGAGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	108469645	108467536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108467635_108469586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016975	chr3	+	692	3	ISM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	1181	1701	1181	-1701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACAGTGGTGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	108480195	108488837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108480275_108485431_108485530_108488322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016976	chr3	+	562	1	Genic_Genomic	ENSMUSG00000048100.14	novel	NA	NA	NA	NA	11002	40	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTGTTTTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108490016	108490578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_108490000_108490600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016977	chr3	+	388	3	ISM	ENSMUSG00000040389.16	ENST00000369962.8	4083	15	19944	27008	19944	-27008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAGGCTGGTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	108518669	108526022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108518756_108521648_108521734_108525805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016978	chr3	+	396	2	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	27611	22265	27611	-22265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATTTATTGGATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	108526336	108530765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108526609_108530641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016979	chr3	+	292	2	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	31915	20991	31915	-20991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTAATAGGTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	108530640	108532039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108530766_108531872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016980	chr3	+	310	2	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	33260	18268	33260	-18268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAAGCCAGAAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	108531985	108534762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108532052_108534518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016981	chr3	+	339	2	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	35789	15946	35789	-15946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTTTGAGAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	108534514	108537084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108534777_108537007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016982	chr3	+	332	2	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	41648	8553	41648	-8553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCCCGGTGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	108540373	108544477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108540535_108544306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016983	chr3	+	306	2	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	45580	7687	45580	-7687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGGGTCTTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	108544305	108545343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108544477_108545208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016984	chr3	+	298	2	ISM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	46485	6960	46485	-6960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTAAGTTTTCCATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	108545210	108546070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108545380_108545941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016985	chr3	+	287	1	ISM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	54149	5	54018	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATCTGTCCTTTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	108552743	108553030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108552700_108553000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016986	chr3	+	492	4	ISM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	0	6108	0	-6108	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAAATACATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108568670	108576155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108568812_108569247_108569350_108570839_108570948_108576014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016987	chr3	+	550	5	ISM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	571	2029	571	-2029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAATATGTTTTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	108569241	108580234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108569350_108570839_108570948_108576014_108576156_108578217_108578312_108580135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016988	chr3	+	512	5	ISM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	2245	1520	2245	-1520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTACCTTAGCACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	108570915	108580743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108570948_108576014_108576156_108578217_108578312_108580135_108580234_108580596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016989	chr3	+	237	2	ISM	ENSMUSG00000027884.17	ENSMUST00000106613.2	3064	11	9613	9842	2248	-6777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTGTTTATGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	108570918	108575486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108570948_108575278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016990	chr3	+	656	4	ISM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	9545	-4	9545	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCCCAGCGTAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108578215	108582267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108578312_108580135_108580234_108580596_108580744_108581952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016991	chr3	+	627	4	NNC	ENSMUSG00000027884.17	novel	1142	8	NA	NA	9575	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGTCCCCAGCGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	108578245	108582264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_108578312_108580135_108580234_108580596_108580748_108581952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016992	chr3	-	460	2	Antisense	novelGene_ENSMUSG00000027884.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACCAAAGACCAGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	108582264	108580594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_-_108580741_108581950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016993	chr3	+	313	1	NIC	ENSMUSG00000027884.17	novel	2043	12	NA	NA	13281	1	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGTCCCCAGCGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	108581951	108582264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_108582000_108582300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016994	chr3	+	149	1	ISM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	24776	3	17334	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGGTCTGGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	108586004	108586153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_108586000_108586200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016995	chr3	-	217	1	ISM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	42515	940	31788	4	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAACCACAGGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	108587110	108586893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108586900_108587100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016996	chr3	-	263	2	ISM	ENSMUSG00000027883.16	ENST00000674700.1	1952	13	39448	69	28801	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGAGTTTGGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	108590097	108586966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108587120_108589987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016997	chr3	-	276	2	ISM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	35289	668	24642	-668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCCTTCTTTGCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	108594256	108589986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108590142_108594135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016998	chr3	-	184	2	ISM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	32393	4884	21746	-4884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGCACTAAGGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	108597152	108594202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108594316_108597081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000016999	chr3	-	205	2	ISM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	14502	10182	14502	-7761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTCTCAGCTTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	108604396	108597079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108597153_108604264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017000	chr3	-	242	2	ISM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	13945	17365	13945	-14944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGCACCCTGAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	108604953	108604262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108604395_108604843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017001	chr3	-	267	2	ISM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	12509	17944	12509	-15523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAACAAAAGAAATCGCC	NA	NA	NA	NA	NA	NA	NA	NA	108606389	108604841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108604953_108606233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017002	chr3	-	223	2	ISM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	10800	19388	10800	-16967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCGATTACCACCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108608098	108606285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108606390_108607979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017003	chr3	-	234	2	ISM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	10572	21088	10572	-18667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAAGTTAGTCAGATATT	NA	NA	NA	NA	NA	NA	NA	NA	108608326	108607985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108608096_108608202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017004	chr3	-	234	2	ISM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	9708	21325	9708	-18904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTATAGCTCACGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108609190	108608222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108608327_108609060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017005	chr3	-	627	4	ISM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	172	22171	172	-19750	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATGAGTGAGTACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	108618726	108609068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108609204_108609714_108609851_108610180_108610403_108618592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017006	chr3	-	598	3	ISM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	5	20861	5	-20861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCAGCCTTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	108629540	108610179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108610403_108618592_108618784_108629356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017007	chr3	-	274	2	ISM	ENSMUSG00000027883.16	ENST00000674700.1	1952	13	60	23360	60	-20939	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAATGCTTACTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	108629485	108610257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108610403_108629356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017008	chr3	-	621	1	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	46715	0	46714	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTTTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	108701112	108700491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108700500_108701100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017009	chr3	-	631	2	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	45577	191	45576	-179	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAAACTGAGATTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	108702250	108700682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_108701181_108702117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017010	chr3	-	3024	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	108819041	108810122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017011	chr3	+	2090	4	ISM	ENSMUSG00000040322.11	ENST00000370041.4	2914	10	25088	0	25088	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGGAAAAAACCCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	109068613	109075678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_109068701_109070734_109070886_109073641_109075011_109075195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017012	chr3	-	2455	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	-1	-4	-1	4	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGGGGCTCTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	110158315	110155860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_110155900_110158300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017013	chr3	+	849	2	ISM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	186361	-406	186361	406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAAATATTTGTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	114010621	114012946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_114010854_114012329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017014	chr3	+	1184	1	ISM	ENSMUSG00000027966.21	ENSMUST00000092155.12	7667	67	188604	391	188532	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCATTTTCTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	114012792	114013976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_114012800_114014000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017015	chr3	-	2306	1	ISM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	2190	144	833	1	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCTGGTGTTCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	115506531	115504225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_115504200_115506500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017016	chr3	-	2365	2	FSM	ENSMUSG00000045092.9	ENST00000475289.2	2650	2	-1	286	-1	-286	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATCCATTTCAACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	115507365	115504512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_115506764_115507251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017017	chr3	-	662	3	FSM	ENSMUSG00000054426.12	ENSMUST00000188260.7	739	3	80	-3	-62	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTATGGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	115681663	115675226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_115675488_115679862_115680025_115681424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017018	chr3	-	264	1	Genic_Genomic	ENSMUSG00000054426.12	novel	NA	NA	NA	NA	6111	3	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTATGGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	115675490	115675226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_115675200_115675500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017019	chr3	-	335	2	FSM	ENSMUSG00000054426.12	ENSMUST00000185681.2	625	2	161	129	-17	76	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATGGGAAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	115681618	115675358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_115675488_115681412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017020	chr3	-	4892	1	ISM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	63542	0	63532	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGTCATGACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	115737513	115732621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_115732600_115737500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017021	chr3	-	565	4	ISM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	50496	-8	50496	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTCTGTAATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	115750549	115739705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_115740005_115740274_115740361_115747700_115747851_115750519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017022	chr3	-	461	4	ISM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	28614	566	28614	-566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTACTGTGCAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115772431	115740279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017023	chr3	-	467	5	ISM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	16645	32601	16645	-32601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCATTCTTATAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	115784400	115772314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017024	chr3	+	2936	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	64	0	48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGTGCTCTGGTGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	115801174	115822666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017025	chr3	+	624	1	ISM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	20875	57	20117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTCATCCACTGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	115821985	115822609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_115822000_115822600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017026	chr3	-	2102	3	ISM	ENSMUSG00000027962.15	ENSMUST00000196449.5	2532	5	3182	0	2533	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTTTTTTCTCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	115919924	115915928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_115917443_115918031_115918299_115919603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017027	chr3	-	380	1	Genic_Genomic	ENSMUSG00000000339.15	novel	NA	NA	NA	NA	18868	2	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTGCTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	116282989	116282609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_116282600_116283000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017028	chr3	-	635	4	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	12514	0	12514	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCTGCTGCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	116289343	116282611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017029	chr3	-	377	4	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	8535	5150	8535	-5150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACTGTGGATGAGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	116293322	116287761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116287827_116289284_116289344_116291238_116291364_116293194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017030	chr3	-	474	4	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	1228	10580	1228	-10580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTTATAGTGCTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	116300629	116293191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116293337_116294760_116294820_116297993_116298118_116300483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017031	chr3	-	385	4	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	401	12148	401	-12148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCTCGGTCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	116301456	116294759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116294820_116297993_116298118_116300483_116300628_116301399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017032	chr3	-	556	4	ISM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	2	15457	2	-15457	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCCGTCGGAGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	116301855	116298068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116298118_116300483_116300628_116301399_116301501_116301593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017033	chr3	-	437	1	FSM	ENSMUSG00000082394.2	ENSMUST00000117197.2	442	1	23	-18	23	18	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAACCTGCGTTATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	116322204	116321767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_116321800_116322200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017034	chr3	+	401	1	ISM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	36511	0	36511	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	116343229	116343630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_116343200_116343600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017035	chr3	-	858	4	ISM	ENSMUSG00000033439.13	ENST00000370141.7	1463	11	8901	-7	8901	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCAAAGTATTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116379464	116374967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017036	chr3	-	703	4	ISM	ENSMUSG00000033439.13	ENST00000370141.7	1463	11	6121	1167	6121	-1167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGACGACAGCTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	116382244	116376141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116376573_116378844_116378920_116379403_116379473_116382116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017037	chr3	-	326	5	ISM	ENSMUSG00000033439.13	ENST00000370139.1	400	6	2203	-1	2203	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATCACTAAACGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	116386162	116383128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116383205_116383382_116383453_116383878_116383942_116385841_116385909_116386112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017038	chr3	+	265	3	ISM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	25110	2010	25108	-2010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGGCCTTGTTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	116413766	116420786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_116413841_116415031_116415158_116420721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017039	chr3	-	1085	1	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	30429	0	30429	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	116425897	116424812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116424800_116425900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017040	chr3	-	1215	2	ISM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	28791	267	28791	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACCCTAGAAGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	116427535	116425079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116426130_116427370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017041	chr3	-	1321	3	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	13354	0	13354	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTAGTTTTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	116474928	116466340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116467368_116471511_116471631_116474753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017042	chr3	-	359	1	ISM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	39218	3604	21201	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTTGATTAAGTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	116467081	116466722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116466700_116467100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017043	chr3	-	749	4	ISM	ENSMUSG00000027957.14	ENSMUST00000120120.8	1791	9	30965	232	13367	121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTAGTGACTTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	116474915	116467033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017044	chr3	-	219	1	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	20913	4	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTGAAAACGTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	116467369	116467150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_116467200_116467400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017045	chr3	-	417	3	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	7447	5170	7447	-4356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCATATAAGTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	116480835	116471510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116471631_116474753_116474926_116480710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017046	chr3	-	347	3	ISM	ENSMUSG00000027957.14	ENST00000639221.1	863	5	7208	4456	7208	-4456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAATGGGTGTATACGT	NA	NA	NA	NA	NA	NA	NA	NA	116481074	116471610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116471631_116474753_116474926_116480919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017047	chr3	-	394	3	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	7209	8468	7209	-7654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAATCTTAAAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	116481073	116474808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116474926_116480710_116480834_116480919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017048	chr3	-	451	3	ISM	ENSMUSG00000027957.14	ENST00000639221.1	863	5	-1	7680	-1	-7680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGGCTTTGCTGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	116488283	116474834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116474926_116480919_116481075_116488078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017049	chr3	-	455	3	ISM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	27	14370	27	-13556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTATTCAAGATAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	116488255	116480710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116480834_116480919_116481075_116488078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017050	chr3	-	395	3	ISM	ENSMUSG00000027957.14	ENST00000427993.7	1826	9	10218	14254	-7413	-13822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAACAACTTACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	116495695	116480976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116481075_116488078_116488284_116495603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017051	chr3	-	362	3	ISM	ENSMUSG00000027957.14	ENST00000427993.7	1826	9	21	21451	-12	-21019	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGGGGCCTCGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	116505892	116488173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116488284_116495603_116495695_116505731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017052	chr3	-	1824	7	ISM	ENSMUSG00000033377.15	ENST00000615664.1	1850	8	15390	-4	15390	4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGACTATCTTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	116746777	116711921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741604_116741685_116746705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017053	chr3	-	1373	5	ISM	ENSMUSG00000028007.14	ENSMUST00000198499.5	1314	8	9371	-529	9371	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTTTAAGTTATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	117630986	117575292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017054	chr3	+	388	1	FSM	ENSMUSG00000106037.2	ENSMUST00000196114.2	346	1	28	-70	28	70	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCCTTCAAAATAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	119503192	119503580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_119503200_119503600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017055	chr3	-	2397	4	ISM	ENSMUSG00000028134.12	ENST00000675401.1	2746	9	23786	-330	23786	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGGCATTGGCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	119517819	119512081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017056	chr3	-	1547	1	ISM	ENSMUSG00000028134.12	ENST00000676292.1	3469	12	41493	308	27669	1	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTTCCTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	119513936	119512389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_119512400_119513900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017057	chr3	-	156	2	ISM	ENSMUSG00000028134.12	ENSMUST00000197464.5	1742	7	30210	5350	-5120	-5350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAGCTATTACTATGG	NA	NA	NA	NA	NA	NA	NA	NA	119546725	119545633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_119545657_119546592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017058	chr3	+	1334	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	13	690	13	-690	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCCCTCTCTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121085434	121156053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017059	chr3	+	891	1	Genic_Genomic	ENSMUSG00000039887.12	novel	NA	NA	NA	NA	70379	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGGTATTTTAAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	121155854	121156745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_121155900_121156700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017060	chr3	+	641	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	19	6686	19	-6290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTACGCACTCTTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	121220164	121245170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017061	chr3	+	287	3	NNC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	23177	-6327	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTCAGACGACGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	121243595	121245133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_121243714_121243940_121244008_121245031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017062	chr3	+	431	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	23465	6208	23192	-5812	internal_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTGTGATACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121243610	121245648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121243720_121243940_121244008_121245031_121245170_121245531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017063	chr3	+	429	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	23837	3112	23564	-2716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGGGTCTTTTTAACAC	NA	NA	NA	NA	NA	NA	NA	NA	121243982	121248744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121244008_121245031_121245170_121245531_121245649_121248595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017064	chr3	+	640	4	ISM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	24965	809	24692	-413	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGACGACCAGGGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	121245110	121251047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121245170_121245531_121245649_121248595_121248743_121250730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017065	chr3	+	352	1	Genic_Genomic	ENSMUSG00000053931.12	novel	NA	NA	NA	NA	31089	3	mono-exon	FALSE	NA	NA	NA	NA	NA	735	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGTTATTTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	121251507	121251859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_121251500_121251900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017066	chr3	+	324	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	48	9966	48	-9966	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGCCAGGTTAAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	121517233	121518731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121517452_121518625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017067	chr3	+	316	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	1434	5508	1434	-5508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTACCGAGACAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	121518619	121523189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121518732_121522985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017068	chr3	+	362	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	5835	3346	5835	-3346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGATTTTCCATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	121523020	121525351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121523204_121525172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017069	chr3	+	339	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	7987	2508	7987	-2508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCCATGGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	121525172	121526189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121525352_121526029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017070	chr3	+	179	1	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	7987	3346	7987	-3346	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGATTTTCCATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	121525172	121525351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121525200_121525400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017071	chr3	+	341	2	ISM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	8842	764	8842	-764	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCGGAGAGCTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	121526027	121527933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_121526190_121527754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017072	chr3	+	218	1	Genic_Genomic	ENSMUSG00000028128.14	novel	NA	NA	NA	NA	11295	1	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATTTATATCTTCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	121528480	121528698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_121528500_121528700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017073	chr3	-	888	1	ISM	ENSMUSG00000028127.11	ENSMUST00000197383.5	3156	19	55375	130	55375	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCCTGACCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	121553440	121552552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_121552600_121553400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017074	chr3	+	585	3	ISM	ENSMUSG00000028124.16	ENST00000615724.1	1794	6	12	5179	4	-4508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGAAATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122039320	122055576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122039761_122052855_122052941_122055516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017075	chr3	+	421	1	FSM	ENSMUSG00000093392.2	ENSMUST00000175860.2	492	1	293	-222	293	222	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCCAAATGTCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	122050669	122051090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_122050700_122051100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017076	chr3	+	1301	5	ISM	ENSMUSG00000028124.16	ENST00000615724.1	1794	6	13545	43	13537	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAACATTATTGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	122052853	122060712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017077	chr3	+	595	1	ISM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	20956	3625	20845	1	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATCTTCAGAGTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	122060161	122060756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122060200_122060800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017078	chr3	+	863	1	ISM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	24313	0	24202	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGATTTGTAAATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	122063518	122064381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122063500_122064400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017079	chr3	+	970	2	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	19	9176	19	-9176	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGAGTCTTTCTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	122068055	122069744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122068128_122068846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017080	chr3	+	1658	6	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	1490	0	1490	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	122069526	122078920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017081	chr3	+	639	2	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	65	103449	65	-103449	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTTCAGGTAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	122213491	122220391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122213833_122220093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017082	chr3	+	425	2	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	85147	21772	85147	-21772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGGAGCGTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	122298573	122302068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122298705_122301774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017083	chr3	+	740	3	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	88495	17504	88495	-17504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGACAGCCAAACAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	122301921	122306336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122302221_122304867_122304972_122305999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017084	chr3	+	379	2	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	92873	10903	92873	-10903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGAAGAGGAGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	122306299	122312937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122306653_122312911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017085	chr3	+	490	3	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	105143	448	105143	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGCCGAGCTGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	122318569	122323392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122318685_122318935_122319149_122323230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017086	chr3	+	359	1	ISM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	110055	0	110055	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCTTTATTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	122323481	122323840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_122323500_122323800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017087	chr3	-	2611	4	ISM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	73294	0	73294	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTACTTATCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	122340045	122332367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017088	chr3	+	1165	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACACTGTGTCAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	122717851	122719838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_122718306_122719127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017089	chr3	-	1119	2	Antisense	novelGene_ENSMUSG00000054091.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGGCCGGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	122719833	122717891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_-_122718303_122719125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017090	chr3	-	714	3	ISM	ENSMUSG00000028116.14	ENSMUST00000029761.14	1181	6	18349	0	18349	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTTGTATTCATTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	122810315	122799854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_122800267_122807248_122807433_122810197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017091	chr3	-	437	1	ISM	ENSMUSG00000050315.15	ENSMUST00000106426.8	7063	5	155945	3196	36901	1	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACAGTTGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	122873800	122873363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_122873400_122873800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017092	chr3	-	713	3	FSM	ENSMUSG00000050315.15	ENST00000448416.6	872	3	9	150	9	-150	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCCAGTTGCCATATGT	NA	NA	NA	NA	NA	NA	NA	NA	123029719	122873514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_122873908_122914767_122914920_123029551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017093	chr3	-	391	2	NNC	ENSMUSG00000050315.15	novel	872	3	NA	NA	-4203	-286	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTCCCAAGAGGACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	122914904	122873650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_122873905_122914767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017094	chr3	-	326	1	ISM	ENSMUSG00000050315.15	ENSMUST00000051443.8	8121	2	10124	0	10124	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCCTCTGTTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	122900577	122900251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_122900300_122900600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017095	chr3	-	2103	2	FSM	ENSMUSG00000050315.15	ENSMUST00000051443.8	8121	2	-549	6567	-549	-6567	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACGCCCAAGCCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	122911250	122906818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_122908276_122910604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017096	chr3	-	814	1	ISM	ENSMUSG00000028114.17	ENSMUST00000090371.14	7197	7	16821	0	16821	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGTTTTCCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	123162759	123161945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_123161900_123162800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017097	chr3	-	1173	4	ISM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	12046	642	11869	-642	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTCCCAGAACTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	123167711	123162587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017098	chr3	-	449	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTCCTGTTTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	123302053	123301199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_123301310_123301465_123301512_123301760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017099	chr3	+	2012	1	FSM	ENSMUSG00000044528.6	ENSMUST00000058994.6	3889	1	1877	0	1877	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGAGCTTCAATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	124116380	124118392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_124116400_124118400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017100	chr3	+	483	1	FSM	ENSMUSG00000096544.3	ENSMUST00000178993.3	331	1	208	-360	208	360	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTACTTCAGACTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	124179523	124180006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_124179500_124180000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017101	chr3	+	349	1	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTTTTAGTATACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	124180007	124180356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr3_+_124180000_124180400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017102	chr3	+	1216	2	FSM	ENSMUSG00000046561.10	ENSMUST00000093976.4	3859	2	1304	1339	1304	-1339	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCACAATGAAAGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	126158636	126232685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_126158815_126231647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017103	chr3	+	1176	1	Genic_Genomic	ENSMUSG00000046561.10	novel	NA	NA	NA	NA	75517	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGTGGCTTTCCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	126232849	126234025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_126232800_126234000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017104	chr3	+	210	1	FSM	ENSMUSG00000105233.2	ENSMUST00000197129.2	208	1	95	-97	95	97	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTCTCTTCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	126241486	126241696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_126241500_126241700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017105	chr3	+	195	3	ISM	ENSMUSG00000053819.17	ENSMUST00000171289.8	2217	21	213351	4866	213245	-4866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGTATCCATTCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	126604307	126632001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_126604337_126628222_126628299_126631911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017106	chr3	+	172	2	ISM	ENSMUSG00000053819.17	ENSMUST00000171289.8	2217	21	241010	2950	240904	-2950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGCAGTCAGAAGAGACG	NA	NA	NA	NA	NA	NA	NA	NA	126631966	126633917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_126632007_126633785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017107	chr3	+	180	2	ISM	ENSMUSG00000053819.17	ENSMUST00000171289.8	2217	21	242967	1645	242861	-1645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGCATCTTGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	126633923	126635222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_126634015_126635133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017108	chr3	+	158	1	ISM	ENSMUSG00000053819.17	ENSMUST00000199300.5	5524	19	249162	0	248755	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTTTTGTGGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	126639817	126639975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_126639800_126640000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017109	chr3	-	2786	5	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	47998	-2	47998	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTATAGCCTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127475102	127464591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_127464781_127466008_127466196_127466968_127467132_127471334_127471489_127473009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017110	chr3	-	2274	3	ISM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	45012	8437	45012	-8437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACTCCAACAAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	127478088	127473030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_127475102_127477156_127477262_127477990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017111	chr3	-	1613	1	ISM	ENSMUSG00000074238.7	ENSMUST00000200409.5	2580	9	28904	0	28892	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATCATGGCTTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	127602268	127600655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_127600700_127602300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017112	chr3	+	1183	4	FSM	ENSMUSG00000028023.17	ENSMUST00000106382.11	1757	4	112	462	112	232	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCCACAAATGTTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	128993686	129012778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_128993812_128997585_128997642_129009287_129009494_129011982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017113	chr3	+	2274	3	FSM	ENSMUSG00000028023.17	ENSMUST00000042587.12	2271	3	0	-3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	129007620	129013240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_129008431_129009287_129009494_129011982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017114	chr3	+	844	1	Genic_Genomic	ENSMUSG00000028023.17	novel	NA	NA	NA	NA	4474	1	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGGATTCTTTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	129012397	129013241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_129012400_129013200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017115	chr3	+	1239	2	ISM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	95930	823	95899	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGAGGTAGAGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129421933	129427797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_129422084_129426708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017116	chr3	+	1104	1	ISM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	105006	0	105006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	129431040	129432144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_129431000_129432100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017117	chr3	+	1271	7	FSM	ENSMUSG00000058952.13	ENST00000394635.8	1271	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGGTTTGTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129652022	129668978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_129652118_129652361_129652504_129661821_129661960_129662129_129662234_129666489_129666768_129667934_129668040_129668569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017118	chr3	+	551	4	ISM	ENSMUSG00000058952.13	ENST00000512148.5	1122	7	363	2149	363	-2149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGTTCCAACCGAATG	NA	NA	NA	NA	NA	NA	NA	NA	129652385	129666711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_129652473_129661821_129661960_129662129_129662234_129666489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017119	chr3	+	796	3	ISM	ENSMUSG00000027999.16	ENSMUST00000061165.9	476	4	7695	-431	7695	431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACCTGGAAAAACTATTA	NA	NA	NA	NA	NA	NA	NA	NA	129682527	129689037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_129682607_129683916_129684083_129688486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017120	chr3	+	590	1	ISM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	16630	0	14052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGTGTTTTCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	129688884	129689474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_129688900_129689500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017121	chr3	+	1106	3	ISM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	9097	0	9097	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGCACTCTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	129704170	129707752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_129704348_129705766_129705924_129706980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017122	chr3	+	774	1	NIC	ENSMUSG00000027997.10	novel	1456	7	NA	NA	11905	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGCACTCTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	129706978	129707752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_129707000_129707800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017123	chr3	-	1150	1	ISM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	76999	0	76816	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTGCAATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	129777557	129776407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_129776400_129777600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017124	chr3	+	374	1	FSM	ENSMUSG00000063328.7	ENSMUST00000076703.7	567	1	264	-71	264	71	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTTACAGATCTAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	129862324	129862698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_129862300_129862700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017125	chr3	-	1072	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	-5	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACTTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	130503098	130489560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017126	chr3	-	619	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	5	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTATCTGTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	130523981	130520479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017127	chr3	-	123	1	NIC	ENSMUSG00000062006.13	novel	624	5	NA	NA	3373	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTACGCTTCCGTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	130520610	130520487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_130520500_130520600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017128	chr3	-	244	3	NNC	ENSMUSG00000062006.13	novel	624	5	NA	NA	1186	-83	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAAAGTCTTGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	130522797	130520570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_130520609_130522396_130522501_130522695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017129	chr3	-	340	4	FSM	ENSMUSG00000062006.13	ENSMUST00000133802.6	711	4	-66	437	-2	-437	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTGTGTCCGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	130524049	130522417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_130522501_130522699_130522800_130522877_130522952_130523966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017130	chr3	-	240	3	NNC	ENSMUSG00000062006.13	novel	711	4	NA	NA	7	-717	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCCTTTTGATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	130524040	130522697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_130522800_130522877_130522952_130523976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017131	chr3	-	246	3	NNC	ENSMUSG00000062006.13	novel	711	4	NA	NA	15	-717	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCCTTTTGATAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	130524032	130522697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_130522800_130522873_130522952_130523966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017132	chr3	+	732	4	ISM	ENSMUSG00000027985.15	ENST00000510624.5	1422	11	8	38407	8	-38407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCCTCCGGCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	130906072	130978425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_130906470_130907504_130907572_130909061_130909196_130978291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017133	chr3	+	510	4	ISM	ENSMUSG00000027985.15	ENST00000510624.5	1422	11	72227	28396	71846	-28396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAACGGTGCGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	130978291	130988436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_130978425_130982983_130983075_130986777_130986901_130988273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017134	chr3	-	534	5	FSM	ENSMUSG00000027984.9	ENST00000638621.1	531	5	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCCAGCAACACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	131065656	131027814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131065524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017135	chr3	-	1530	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	186	0	186	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTATGGACAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	131096663	131086936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017136	chr3	-	364	1	ISM	ENSMUSG00000050931.8	ENSMUST00000090246.5	5801	6	25585	0	25585	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGAATTTCGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	131112997	131112633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_131112600_131113000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017137	chr3	+	875	6	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	34965	12049	34965	-12048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTTTTATATTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	131305624	131337383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017138	chr3	+	1550	5	ISM	ENSMUSG00000028032.14	ENSMUST00000200527.5	2811	15	40945	0	40945	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	131311604	131349432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017139	chr3	+	708	1	ISM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	78196	0	78065	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	131348724	131349432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_131348700_131349400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017140	chr3	-	390	1	FSM	ENSMUSG00000106313.2	ENSMUST00000196849.2	388	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGCCATATCAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	132361543	132361153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_132361200_132361500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017141	chr3	-	440	2	ISM	ENSMUSG00000028029.12	ENST00000442366.6	882	5	9571	-1	9571	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTTTTGATTCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	132373323	132366240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132366503_132373145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017142	chr3	-	753	4	ISM	ENSMUSG00000028029.12	ENST00000442366.6	882	5	2271	0	2271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTTTGATTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132380623	132366241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132366503_132373145_132373315_132377739_132377949_132380509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017143	chr3	-	622	3	ISM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	4944	-9	4944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132377950	132366259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132366498_132373141_132373315_132377739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017144	chr3	-	244	1	NIC	ENSMUSG00000028029.12	novel	882	5	NA	NA	16391	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	132366503	132366259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_132366300_132366500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017145	chr3	-	550	3	ISM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	3001	6873	3001	-6873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTAATTATTTAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	132379893	132373141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132373315_132377739_132377949_132379725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017146	chr3	-	626	4	ISM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	-5	11467	-5	-11467	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCGCTAGAGACGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	132382899	132377735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132377949_132379725_132379891_132380509_132380624_132382765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017147	chr3	+	675	2	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	131084	3175	131084	-3175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTGTGTGTGTACATGT	NA	NA	NA	NA	NA	NA	NA	NA	132520988	132544274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_132521111_132543721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017148	chr3	+	662	1	ISM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	156883	0	156883	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTAGTCTCGTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	132546787	132547449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_132546800_132547400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017149	chr3	-	2217	1	ISM	ENSMUSG00000040998.19	ENSMUST00000042744.16	4619	12	66330	0	65853	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTCTTCCTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	132589722	132587505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132587500_132589700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017150	chr3	-	498	2	ISM	ENSMUSG00000040998.19	ENST00000506666.5	1991	12	64042	131	63812	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGACACTCTCGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	132591763	132590023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132590275_132591516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017151	chr3	-	337	2	ISM	ENSMUSG00000040998.19	ENSMUST00000117164.8	1779	13	59178	1348	58949	-1348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGGGGCTGACGTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132596626	132591538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132591774_132596524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017152	chr3	-	365	3	ISM	ENSMUSG00000040998.19	ENSMUST00000117164.8	1779	13	45160	6381	44931	-6381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGATAGTGACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	132610644	132596571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132596624_132597162_132597250_132610418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017153	chr3	-	483	3	ISM	ENSMUSG00000040998.19	ENSMUST00000117164.8	1779	13	43213	20400	42984	-20400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCACCACCCCTCCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	132612591	132610590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132610815_132612107_132612231_132612455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017154	chr3	-	228	2	ISM	ENSMUSG00000040998.19	ENSMUST00000117164.8	1779	13	40026	23927	39797	-23927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACCTGTGTGGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	132615778	132614117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132614224_132615656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017155	chr3	-	291	2	ISM	ENSMUSG00000040998.19	ENSMUST00000117164.8	1779	13	-129	63627	-12	-63627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCCAACGTGAGTATCG	NA	NA	NA	NA	NA	NA	NA	NA	132655933	132653817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132653909_132655733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017156	chr3	-	1209	1	ISM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	108865	0	108862	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCCTCTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	132688721	132687512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_132687500_132688700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017157	chr3	+	333	4	ISM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	3	51377	3	-51175	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGATACATTTTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	133015873	133032462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017158	chr3	+	672	8	FSM	ENSMUSG00000028013.17	ENST00000348706.9	682	8	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGACACAGGGCTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	133028340	133083637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_133028378_133032408_133032463_133036153_133036274_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017159	chr3	+	520	5	ISM	ENSMUSG00000028013.17	ENST00000341695.10	769	9	4076	9924	4076	-9924	internal_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAGGATGTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	133032406	133073713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017160	chr3	+	446	4	ISM	ENSMUSG00000028013.17	ENST00000341695.10	769	9	16687	7399	-8808	-7399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCTGCAGATACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	133045017	133076238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_133045111_133053824_133053952_133073583_133073712_133076140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017161	chr3	+	325	4	ISM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	57712	1490	-1	-1288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGGAATGTCTCTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	133073582	133082349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_133073712_133076140_133076227_133079383_133079454_133082309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017162	chr3	+	343	3	ISM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	63512	0	5799	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTTTATATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	133079382	133083839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_133079454_133082309_133082350_133083607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017163	chr3	+	234	1	NIC	ENSMUSG00000028013.17	novel	1226	12	NA	NA	10022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTTTATATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	133083605	133083839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_133083600_133083800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017164	chr3	+	261	3	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	82	57207	82	-57207	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACAAGGCTACAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	134918379	134922165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134918476_134920864_134920957_134922092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017165	chr3	+	236	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	10632	48550	10632	-48550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATTAGAGGAGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	134928929	134930822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134929061_134930717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017166	chr3	+	246	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	16234	43463	16234	-43463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTTCTGTGACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	134934531	134935909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134934677_134935808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017167	chr3	+	248	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	18837	40547	18837	-40547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAGAAATAGAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	134937134	134938825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134937215_134938657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017168	chr3	+	231	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	20358	39823	20358	-39823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGACCTTGAGGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	134938655	134939549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134938826_134939488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017169	chr3	+	237	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	28410	31472	28410	-31472	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATGGAAAGCTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	134946707	134947900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134946868_134947823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017170	chr3	+	218	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	33950	26736	33950	-26736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAGATGAGTGAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	134952247	134952636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134952407_134952577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017171	chr3	+	254	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	34894	25483	34894	-25483	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATCAACAAGCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	134953191	134953889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134953387_134953830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017172	chr3	+	240	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	36027	23816	36027	-23816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAATTACAAGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	134954324	134955556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134954425_134955416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017173	chr3	+	266	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	44085	14228	44085	-14228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTATGCTTTATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	134962382	134965144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134962457_134964952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017174	chr3	+	326	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	46727	13430	46727	-13430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTACCGCAGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	134965024	134965942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134965148_134965739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017175	chr3	+	272	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	49046	9196	49046	-9196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTACGCCTGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	134967343	134970176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134967508_134970068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017176	chr3	+	252	2	ISM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	58317	316	58317	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTTGGATGCCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134976614	134979056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_134976722_134978911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017177	chr3	+	175	1	Genic_Genomic	ENSMUSG00000045328.12	novel	NA	NA	NA	NA	60902	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAGCCTTGTTGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	134979199	134979374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_134979200_134979400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017178	chr3	-	2485	1	Genic_Genomic	ENSMUSG00000028165.10	novel	NA	NA	NA	NA	14514	3	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTTTTATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	135114654	135112169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_135112200_135114700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017179	chr3	-	3358	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTCTTTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	135129683	135112172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_135114652_135116771_135116987_135129019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017180	chr3	+	1059	4	NNC	ENSMUSG00000078578.10	novel	2515	7	NA	NA	17890	-87	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGCGAGTTGTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	135164558	135171732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_135164641_135165735_135165842_135168710_135168805_135170955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017181	chr3	+	834	1	ISM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	27558	1242	25215	6	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATTTGGACATGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	135171883	135172717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_135171900_135172700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017182	chr3	+	696	1	Genic_Genomic	ENSMUSG00000078578.10	novel	NA	NA	NA	NA	26596	1	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTTACTCAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	135173264	135173960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_135173300_135174000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017183	chr3	+	417	2	ISM	ENSMUSG00000053897.16	ENST00000682227.1	3096	9	0	61773	0	-61773	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCAGCTGGGGCGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135531719	135532366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_135531771_135532000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017184	chr3	+	734	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	201	32312	201	-32304	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGGGGTGGGCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	135532051	135561835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_135532452_135554776_135554940_135561664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017185	chr3	+	459	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	22923	30781	22923	-30773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGGCTTGACTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	135554773	135563366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_135554940_135561664_135561835_135563243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017186	chr3	+	683	4	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	29804	3981	29804	-3973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCTCAGGGCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	135561654	135590166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_135561835_135563243_135563367_135563831_135564003_135589957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017187	chr3	+	566	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	31979	3600	31979	-3592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGATTCAAGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	135563829	135590547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_135564003_135589957_135590166_135590362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017188	chr3	+	2135	1	FSM	ENSMUSG00000106290.2	ENSMUST00000197889.2	2251	1	116	0	116	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAAGTGTGTGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	135566224	135568359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_135566200_135568400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017189	chr3	+	749	3	ISM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	58104	1229	58104	-1221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGTTTTCGGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	135589954	135592918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_135590166_135590362_135590548_135592565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017190	chr3	+	426	1	ISM	ENSMUSG00000053897.16	ENSMUST00000081978.10	3314	9	62676	14	61865	2	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGAAACCATGTACCGT	NA	NA	NA	NA	NA	NA	NA	NA	135593715	135594141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_135593700_135594100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017191	chr3	-	694	3	ISM	ENSMUSG00000037922.14	ENST00000508653.5	1374	10	130794	37510	130794	-37510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATATTTTGTTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	135809689	135799045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_135799352_135806041_135806351_135809610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017192	chr3	-	755	5	ISM	ENSMUSG00000037922.14	ENST00000444316.2	2785	16	41203	46705	-8333	-44584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGGCCACCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	135948816	135806119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017193	chr3	+	703	3	ISM	ENSMUSG00000028161.18	ENST00000507176.5	1974	13	257761	148	257761	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTACAGTCGCAGCACTA	NA	NA	NA	NA	NA	NA	NA	NA	136634312	136641394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_136634381_136637771_136637802_136640789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017194	chr3	+	2579	1	ISM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	265025	0	264358	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGATGTGAGTATTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	136640909	136643488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_136640900_136643500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017195	chr3	+	778	1	ISM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	3884	0	3884	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTGGCCTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	137333316	137334094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_137333300_137334100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017196	chr3	-	1693	1	FSM	ENSMUSG00000105676.2	ENSMUST00000198011.2	1786	1	93	0	93	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCTGTGGCGCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	137570042	137568349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_137568300_137570000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017197	chr3	+	989	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	0	80	0	24	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGGGACTTACCTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	137570247	137572603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017198	chr3	+	728	4	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	522	-22	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCAATAAAGGTCATATC	NA	NA	NA	NA	NA	NA	NA	NA	137570895	137572557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_137570972_137571280_137571395_137571771_137571899_137572146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017199	chr3	+	501	1	Genic_Genomic	ENSMUSG00000037894.14	novel	NA	NA	NA	NA	1813	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1907	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTACTTTTGTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	137572186	137572687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_137572200_137572700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017200	chr3	+	1161	6	ISM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	345	-2	345	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTGTATAGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	137624631	137634528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017201	chr3	+	292	1	ISM	ENSMUSG00000090066.3	ENSMUST00000163080.3	9741	2	16163	0	16163	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACACTGTTAGTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	137786975	137787267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_137787000_137787300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017202	chr3	-	459	2	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	32495	-1	32495	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGAACTTCAGTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	137798511	137796703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137796991_137798339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017203	chr3	-	290	1	NIC	ENSMUSG00000028158.15	novel	3963	18	NA	NA	34013	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGAACTTCAGTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	137796993	137796703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_137796700_137797000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017204	chr3	-	424	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	21929	1737	21929	-1626	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGAGACAGAGGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	137809077	137798441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137798511_137800719_137800845_137808847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017205	chr3	-	356	2	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	20452	12142	20452	-12031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTACCTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	137810554	137808846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137809076_137810427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017206	chr3	-	363	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	20203	12230	20203	-12119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATTTGATGTCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	137810803	137808934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137809076_137810427_137810546_137810699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017207	chr3	-	433	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	17933	13721	17933	-13610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGCACGCCCAAGAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	137813073	137810425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137810546_137810699_137810802_137812862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017208	chr3	-	474	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	16075	14047	16075	-13936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTCCAAGAGTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	137814931	137810751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137810802_137812862_137813072_137814716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017209	chr3	-	476	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	12617	18026	12617	-17915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACAGATGAGGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	137818389	137814730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137814930_137817404_137817513_137818220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017210	chr3	-	482	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	9959	21512	9959	-21401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGGACACTGGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	137821047	137818216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137818390_137819816_137819975_137820896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017211	chr3	-	351	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	9193	23121	9193	-23010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTGCTGTAAGCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	137821813	137819825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137819975_137820896_137821048_137821762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017212	chr3	-	368	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	6823	25057	6823	-24946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGACAATAATGCTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	137824183	137821761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137821903_137822167_137822285_137824073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017213	chr3	-	372	3	ISM	ENSMUSG00000028158.15	ENST00000511045.6	2735	17	1368	25461	1368	-25350	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCAGCTTCCTCGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	137829638	137822165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_137822285_137824073_137824182_137829493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017214	chr3	+	612	2	ISM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	11180	2604	11180	-2604	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGTTCGTCACTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	137860457	137862975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_137860560_137862465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017215	chr3	+	529	1	ISM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	15845	0	15776	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTCAGCTAATGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	137865053	137865582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_137865100_137865600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017216	chr3	+	1133	1	Genic_Genomic	ENSMUSG00000055301.9	novel	NA	NA	NA	NA	14492	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGATGCCTCCAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	137938012	137939145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_137938000_137939100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017217	chr3	+	800	5	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	2194	4011	-1	-3313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGTGAAGGTCATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	138151047	138157249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017218	chr3	+	935	6	FSM	ENSMUSG00000028138.9	ENST00000626055.2	943	6	11	-3	11	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTTTTCAGTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	138151059	138160565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_138151153_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017219	chr3	+	825	5	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	3988	1646	1793	-948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAGGCACCGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	138152841	138159614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017220	chr3	+	1107	5	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	7871	-1	5676	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGTATTCAGAAAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	138156724	138161261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017221	chr3	-	400	1	ISM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	30160	0	30043	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTTTTCTAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	138165116	138164716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_138164700_138165100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017222	chr3	+	1145	3	ISM	ENSMUSG00000028156.13	ENSMUST00000200100.2	729	6	23595	-604	23595	64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACATTCCTAACTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	138256651	138262039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_138256768_138259342_138259483_138261150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017223	chr3	+	913	1	ISM	ENSMUSG00000028156.13	ENSMUST00000029803.12	4991	8	32605	0	31488	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCTTGCTTTTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	138264544	138265457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_138264500_138265500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017224	chr3	+	1950	1	ISM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	163761	0	45463	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGTGCATTCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	138611716	138613666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_138611700_138613700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017225	chr3	-	1046	1	Genic_Genomic	ENSMUSG00000028149.13	novel	NA	NA	NA	NA	148124	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTACTTGGTTTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	138632707	138631661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_138631700_138632700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017226	chr3	-	396	2	ISM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	133253	1495	133253	-1495	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATGACTGTCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	138647578	138633165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_138633474_138647490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017227	chr3	-	1075	1	ISM	ENSMUSG00000028273.16	ENSMUST00000170361.9	2010	9	88518	178	88476	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTTATCCAGTAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	142009093	142008018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_142008000_142009100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017228	chr3	-	1070	2	ISM	ENSMUSG00000028273.16	ENSMUST00000168967.9	1755	8	87871	69	87829	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAGATCTAACCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	142009740	142008149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_142009183_142009703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017229	chr3	+	1074	5	ISM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	13176	0	13176	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	142483981	142489367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017230	chr3	+	1283	1	FSM	ENSMUSG00000078162.7	ENSMUST00000181051.3	1002	1	-72	-209	-72	209	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATAGGGCATGAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	142668299	142669582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_142668300_142669600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017231	chr3	-	1114	4	FSM	ENSMUSG00000028266.18	ENSMUST00000121112.6	1447	4	435	-102	435	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTAAACGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	143907658	143894290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017232	chr3	-	1902	6	FSM	ENSMUSG00000040151.10	ENST00000370548.3	1902	6	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAATTAATTATTTACA	NA	NA	NA	NA	NA	NA	NA	NA	144171048	144072541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_144073722_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017233	chr3	+	1507	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	8	-1	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCCTTTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	144276194	144303442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017234	chr3	+	1038	4	NNC	ENSMUSG00000037072.17	novel	1178	4	NA	NA	107	285	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACACGTAGGATGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	144276293	144303091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_144276561_144283346_144283515_144296372_144296437_144302552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017235	chr3	+	536	4	FSM	ENSMUSG00000037072.17	ENST00000401030.4	533	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATCATTAATCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	144283347	144302808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_144283545_144296372_144296437_144300661_144300712_144302583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017236	chr3	+	514	3	NNC	ENSMUSG00000037072.17	novel	533	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTACATCATTAATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	144283348	144302806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_144283545_144296372_144296441_144302556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017237	chr3	+	860	1	NIC	ENSMUSG00000037072.17	novel	1514	5	NA	NA	19233	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGTCCTTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	144302581	144303441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_144302600_144303400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017238	chr3	-	566	1	FSM	ENSMUSG00000105045.2	ENSMUST00000198343.2	562	1	-3	-1	-3	1	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCAGTTTCCTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	144331728	144331162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_144331200_144331700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017239	chr3	-	525	1	Genic_Genomic	ENSMUSG00000037062.14	novel	NA	NA	NA	NA	35909	1	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCACCGGAACAGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	144389962	144389437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_144389400_144390000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017240	chr3	-	868	4	ISM	ENSMUSG00000037062.14	ENSMUST00000199531.5	2584	10	23156	999	23156	-999	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGTGTTCTATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	144402715	144390437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_144390901_144397218_144397294_144397660_144397890_144402614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017241	chr3	-	796	1	ISM	ENSMUSG00000037062.14	ENSMUST00000198254.5	5945	11	32617	0	32404	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTGCTAGCTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	144393467	144392671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_144392700_144393500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017242	chr3	-	3333	6	ISM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	13626	-19	13401	19	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTGCAGGAGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	144412470	144394585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017243	chr3	-	961	7	ISM	ENSMUSG00000037062.14	ENST00000535010.5	1523	8	50	879	42	-551	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATATTTGTCCAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	144425924	144397657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144425742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017244	chr3	-	479	4	ISM	ENSMUSG00000037062.14	ENSMUST00000199854.5	1416	10	7496	14167	7401	-14167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGTGTCTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	144418470	144411273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_144411367_144412358_144412493_144414993_144415123_144418347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017245	chr3	-	512	4	ISM	ENSMUSG00000037062.14	ENSMUST00000199854.5	1416	10	117	15252	22	-15252	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGGAAAATGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	144425849	144412358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_144412493_144414993_144415123_144418347_144418490_144425742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017246	chr3	+	264	2	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	0	14344	0	-14344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	144841383	144842500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_144841496_144842348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017247	chr3	+	306	2	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	966	11197	966	-11197	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCAGGTGACTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	144842349	144845647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_144842500_144845491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017248	chr3	+	409	3	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	4108	4181	4108	-4181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGCTTCAAGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	144845491	144852663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_144845656_144850072_144850178_144852523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017249	chr3	+	399	3	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	11138	2017	11138	-2017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACAAAAGGTACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	144852521	144854827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_144852683_144854291_144854378_144854675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017250	chr3	+	282	2	ISM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	13297	0	13297	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAAGTATTCGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	144854680	144856844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_144854839_144856720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017251	chr3	+	130	1	NIC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	15333	2	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTATTCGTGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	144856716	144856846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_144856700_144856800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017252	chr3	+	689	2	ISM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	24249	271	23760	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGACACGGGCAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	145306235	145310279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_145306335_145309689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017253	chr3	+	662	1	Genic_Genomic	ENSMUSG00000074182.9	novel	NA	NA	NA	NA	27419	6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGTTATGTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	145309894	145310556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_145309900_145310600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017254	chr3	-	344	1	Genic_Genomic	ENSMUSG00000028195.5	novel	NA	NA	NA	NA	2695	1	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATCCAGGCAATCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	145353041	145352697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_145352700_145353000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017255	chr3	-	588	2	ISM	ENSMUSG00000028195.5	ENST00000451137.7	2001	6	2179	221	2179	-189	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCACTCTAAAACTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	145353557	145352919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_145353208_145353257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017256	chr3	-	855	3	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	1134	668	1134	-668	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTGGACAGAGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	145354602	145353398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_145353724_145353951_145354167_145354287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017257	chr3	-	781	3	ISM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	2	1585	2	-1585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAGCTCACTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	145355734	145354315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_145354633_145354976_145355191_145355484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017258	chr3	-	197	2	NNC	ENSMUSG00000028195.5	novel	2019	5	NA	NA	661	-1799	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGCTGCATTCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	145355075	145354529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_145354628_145354976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017259	chr3	+	1572	4	ISM	ENSMUSG00000028194.16	ENSMUST00000120310.2	2291	6	91515	579	91515	-579	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGCTCAGCTGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	145558017	145598442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_145558080_145558911_145559032_145594838_145594983_145597196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017260	chr3	+	1304	1	ISM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	134299	0	132226	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTAGTGTCTGTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	145598728	145600032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_145598700_145600000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017261	chr3	+	1596	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	0	353	0	-353	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGAGCGCTGACATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	145630016	145639758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_145630271_145636160_145636450_145638705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017262	chr3	+	613	2	ISM	ENSMUSG00000028191.12	ENST00000620248.2	697	3	5975	-1	5975	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCACCGCCTAGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	145636160	145639062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_145636450_145638738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017263	chr3	+	1387	1	Genic_Genomic	ENSMUSG00000028191.12	novel	NA	NA	NA	NA	8551	12	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGAGTTAAATGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	145638736	145640123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_145638700_145640100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017264	chr3	+	363	2	ISM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	136	5748	136	-5748	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGTGGAATCAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	145643904	145644836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_145644084_145644652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017265	chr3	+	335	2	ISM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	924	857	924	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCGCCTCAAGACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	145644692	145649727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_145644852_145649551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017266	chr3	+	206	1	ISM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	6610	0	6610	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTAGCATCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	145650378	145650584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_145650400_145650600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017267	chr3	+	1322	1	Genic_Genomic	ENSMUSG00000036832.6	novel	NA	NA	NA	NA	63916	14	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTTGCCATGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	145990633	145991955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_145990600_145992000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017268	chr3	+	577	4	ISM	ENSMUSG00000036825.13	ENST00000605755.5	1625	11	14219	0	14219	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTACTTGTTTCTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	146138247	146143093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_146138373_146138727_146138902_146142297_146142413_146142930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017269	chr3	+	1376	2	ISM	ENSMUSG00000036825.13	ENST00000437941.6	3147	13	18920	1559	18919	100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATCTTTCTGTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	146142947	146145637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_146143097_146144410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017270	chr3	+	1267	2	ISM	ENSMUSG00000036825.13	ENST00000437941.6	3147	13	20635	-1	20634	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGTGAGACTAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	146144662	146147197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_146145910_146147177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017271	chr3	+	1071	1	ISM	ENSMUSG00000036825.13	ENSMUST00000106153.9	3446	14	34432	0	20800	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTGTCCATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	146144828	146145899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_146144800_146145900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017272	chr3	+	1571	1	ISM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	13809	0	13786	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGACTTATTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	146170033	146171604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_146170000_146171600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017273	chr3	+	597	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTACTAATCTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	146205561	146211331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_146205776_146209014_146209155_146211088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017274	chr3	+	403	3	NNC	ENSMUSG00000068523.13	novel	593	3	NA	NA	-22	-95	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTACCTCTCTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	146205622	146211207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_+_146205776_146209023_146209155_146211088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017275	chr3	-	373	2	Antisense	novelGene_ENSMUSG00000068523.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGACAGTGAAAGGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	146211327	146209013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr3_-_146209145_146211085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017276	chr3	+	241	1	NIC	ENSMUSG00000068523.13	novel	593	3	NA	NA	5223	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGGGTACTAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	146211086	146211327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_146211100_146211300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017277	chr3	-	156	1	ISM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	83231	0	40532	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	146435484	146435328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_146435300_146435500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017278	chr3	-	179	2	ISM	ENSMUSG00000005034.16	ENSMUST00000106137.8	4061	10	22211	16782	22211	-16780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCACCCCAGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	146453805	146452401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_146452451_146453675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017279	chr3	-	174	2	ISM	ENSMUSG00000005034.16	ENSMUST00000106137.8	4061	10	14556	21581	14556	-21579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTGCCCCATTAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	146461460	146457200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_146457301_146461386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017280	chr3	-	539	1	FSM	ENSMUSG00000070343.4	ENSMUST00000084614.5	537	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGATCCAAAAAGCTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	146545102	146544563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_146544600_146545100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017281	chr3	-	2131	2	ISM	ENSMUSG00000028184.13	ENSMUST00000168352.2	2151	3	1951	-2	1951	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGTGCACTTTTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	148526664	148521489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_148523565_148526608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017282	chr3	-	2076	1	NIC	ENSMUSG00000028184.13	novel	6052	23	NA	NA	5049	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACGTGCACTTTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	148523566	148521490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_148521500_148523600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017283	chr3	-	958	4	ISM	ENSMUSG00000028184.13	ENSMUST00000195988.5	4541	22	128281	246	-3527	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTATAAAAGTATGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	148532142	148522974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017284	chr3	-	322	2	ISM	ENSMUSG00000028184.13	ENSMUST00000199059.5	4637	23	133437	585	1629	-585	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGCAGCAGTGAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	148526986	148523313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_148523565_148526915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017285	chr3	-	682	4	ISM	ENSMUSG00000028184.13	ENSMUST00000199059.5	4637	23	115016	19294	-16792	-15426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTCATCGGCATCGAT	NA	NA	NA	NA	NA	NA	NA	NA	148545407	148542022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_148542198_148543199_148543374_148544744_148544951_148545280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017286	chr3	-	330	2	ISM	ENSMUSG00000028184.13	ENSMUST00000199059.5	4637	23	101995	34802	-29813	-30934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTTGGAATTTCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	148558428	148557530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_148557635_148558202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017287	chr3	-	919	2	ISM	ENSMUSG00000028184.13	ENSMUST00000199059.5	4637	23	95431	35473	-36377	-31605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCCTGCACCACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	148564992	148558201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_148558497_148564368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017288	chr3	-	924	3	ISM	ENSMUSG00000028184.13	ENST00000674208.1	5097	21	64108	42455	64008	-37975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCGAAGCAGGCAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	148596263	148564571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_148565170_148571235_148571346_148596047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017289	chr3	+	1402	1	Genic_Genomic	ENSMUSG00000106157.2	novel	NA	NA	NA	NA	744	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGTTTATTGACTATTA	NA	NA	NA	NA	NA	NA	NA	NA	151000542	151001944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_151000500_151001900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017290	chr3	-	1378	1	Genic_Genomic	ENSMUSG00000028035.14	novel	NA	NA	NA	NA	8515	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTTAGAAATTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	151890967	151889589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_-_151889600_151891000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017291	chr3	-	2422	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	37	0	-27	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTATAGTCTTTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	151915683	151889618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017292	chr3	-	1369	3	FSM	ENSMUSG00000028035.14	ENSMUST00000050073.13	2464	3	177	918	177	208	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTAGATTATCCAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	151899305	151890509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_151891018_151892051_151892621_151899013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017293	chr3	+	2298	3	ISM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	17649	-1697	17575	1696	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATTTAAAATCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	151933804	151940105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_151933883_151937513_151937660_151938031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017294	chr3	+	500	1	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	21680	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	151937909	151938409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_151937900_151938400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017295	chr3	+	2576	2	ISM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	23192	-2	23192	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGTGTCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	151939421	151942467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_151941491_151941960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017296	chr3	+	655	1	NIC	ENSMUSG00000028034.16	novel	5878	21	NA	NA	25580	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGTTTGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	151941809	151942464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_+_151941800_151942500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017297	chr3	-	1345	4	ISM	ENSMUSG00000039103.13	ENSMUST00000199423.5	2016	13	12450	-584	10944	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTTTTCTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	151948498	151942618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_151943217_151943301_151943660_151943883_151944070_151948295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017298	chr3	-	717	1	ISM	ENSMUSG00000039103.13	ENSMUST00000199470.5	2392	10	28069	0	16107	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTTTTCTTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	151943335	151942618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_151942600_151943300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017299	chr3	-	739	2	ISM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	15379	-14	15379	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTCTTAAGAACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	151944063	151943100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_151943660_151943883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017300	chr3	-	291	2	FSM	ENSMUSG00000039058.12	ENST00000478255.1	275	2	-2	-14	-2	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAATACATGGAATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	152178584	152169557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_-_152169654_152178389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017301	chr3	-	245	2	NNC	ENSMUSG00000039058.12	novel	275	2	NA	NA	24	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGGAAACAGAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	152178558	152169567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_152169644_152178389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017302	chr3	+	1904	3	ISM	ENSMUSG00000039047.18	ENSMUST00000045029.15	1761	12	33565	-1196	33565	1196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTGAAAGAGACAGATT	NA	NA	NA	NA	NA	NA	NA	NA	152453314	152492755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_152453411_152472075_152472161_152491032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017303	chr3	+	1737	1	Genic_Genomic	ENSMUSG00000039047.18	novel	NA	NA	NA	NA	73178	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTGTGCAGTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	152492927	152494664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_152492900_152494700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017304	chr3	-	620	5	ISM	ENSMUSG00000038975.15	ENST00000462549.1	1009	9	1126	1753	1126	-1753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGTAATTTTGCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	153616525	153614990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_153615097_153615182_153615285_153615690_153615799_153615897_153616004_153616327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017305	chr3	-	1241	5	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	6033	-563	6033	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	153638772	153627993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017306	chr3	-	655	1	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	16157	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	153628648	153627993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr3_-_153628000_153628600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017307	chr3	-	361	3	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	2743	7317	2743	-7317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATAGAACCAGACCTACA	NA	NA	NA	NA	NA	NA	NA	NA	153642062	153635873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_153635995_153638663_153638773_153641931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017308	chr3	-	359	3	NNC	ENSMUSG00000062908.13	novel	1248	10	NA	NA	469	-13372	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTTCATTACTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	153644336	153641928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_153642063_153643341_153643421_153644190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017309	chr3	-	343	3	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	425	13434	425	-13434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGTATGTTATCAACGG	NA	NA	NA	NA	NA	NA	NA	NA	153644380	153641990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_153642063_153643339_153643421_153644190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017310	chr3	-	347	3	ISM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	11	15634	11	-15634	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTCACTAAGACAATCA	NA	NA	NA	NA	NA	NA	NA	NA	153644794	153644190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_153644380_153644533_153644604_153644706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017311	chr3	+	1424	4	ISM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	21766	-1	21766	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTCTGTCTCGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154324113	154328820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_154324247_154327117_154327226_154327315_154327412_154327733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017312	chr3	+	733	2	ISM	ENSMUSG00000028180.19	ENSMUST00000029831.16	2540	10	10602	1091	10573	-1091	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCCTTAGAATCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	157250597	157252882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_157250760_157252311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017313	chr3	+	934	1	Genic_Genomic	ENSMUSG00000028180.19	novel	NA	NA	NA	NA	13090	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTTTTGTCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	157253114	157254048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr3_+_157253100_157254000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017314	chr3	-	266	1	ISM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	30564	0	30564	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	157600150	157599884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157599900_157600200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017315	chr3	+	2490	3	ISM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	53665	0	53665	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	NA	NA	NA	NA	NA	NA	NA	157706715	157713671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_157706810_157709345_157709447_157711376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017316	chr3	-	143	1	ISM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	26024	0	21023	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAGTAACTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	157716252	157716109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157716100_157716300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017317	chr3	-	1115	1	ISM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	24606	446	19605	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	157717670	157716555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157716600_157717700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017318	chr3	-	508	2	ISM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	19368	866	19240	-481	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAACACAGATGAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	157718035	157717421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157717841_157717946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017319	chr3	-	499	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	19208	519	19208	-519	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCATTTGCGTGATCAA	NA	NA	NA	NA	NA	NA	NA	NA	157718067	157717459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157717838_157717946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017320	chr3	-	214	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	18762	1028	18762	-1028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAGTGACAAAGACGTCA	NA	NA	NA	NA	NA	NA	NA	NA	157718513	157717968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157718086_157718416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017321	chr3	-	165	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	17595	1499	17595	-1499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGCTCACCATCCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	157719680	157718439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157718513_157719588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017322	chr3	-	217	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	15183	2655	15183	-2655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCAGGTAAGGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	157722092	157719595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157719679_157721958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017323	chr3	-	174	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	13769	5036	13769	-5036	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCACATCCAAAGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	157723506	157721976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157722091_157723446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017324	chr3	-	199	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	12211	6505	12211	-6505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCTCTCTTGACCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	157725064	157723445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157723529_157724948
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017325	chr3	-	157	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	10234	8008	10234	-8008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATGCTCATACACATG	NA	NA	NA	NA	NA	NA	NA	NA	157727041	157724948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157725077_157727012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017326	chr3	-	142	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	9587	10072	9587	-10072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTTTCTCATTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	157727688	157727012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157727063_157727596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017327	chr3	-	179	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	8683	10685	8683	-10685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTCCAGGAACAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	157728592	157727625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157727690_157728477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017328	chr3	-	232	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	4780	11549	4780	-11549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTACCCAGGTATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	157732495	157728489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157728588_157732361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017329	chr3	-	177	2	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	4780	-11608	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGCTAATGCAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	157732495	157728548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr3_-_157728588_157732357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017330	chr3	-	229	2	ISM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	67	15446	67	-15446	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGTCGTACCATATGC	NA	NA	NA	NA	NA	NA	NA	NA	157737208	157732386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157732496_157737088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017331	chr3	+	1745	3	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	25985	896	25985	-896	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGTTTAACTAAAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	157768283	157773228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_157768364_157769320_157769507_157771749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017332	chr3	+	1524	1	ISM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	30302	0	30302	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	157772600	157774124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_157772600_157774100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017333	chr3	-	1734	1	ISM	ENSMUSG00000028176.14	ENST00000651989.2	7175	27	477382	0	368414	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCACATCACTATAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	157790012	157788278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157788300_157790000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017334	chr3	-	1745	2	ISM	ENSMUSG00000028176.14	ENSMUST00000106044.6	5918	28	400304	72430	290872	-72430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGCATGCAGGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	157867554	157862505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157862566_157865869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017335	chr3	-	1749	2	ISM	ENSMUSG00000028176.14	ENSMUST00000106044.6	5918	28	398177	75879	288745	-75879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGAGAGGAGAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	157869681	157865954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157867551_157869528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017336	chr3	-	469	3	ISM	ENSMUSG00000028176.14	ENST00000370958.5	957	7	160757	0	160757	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGGAACCCAAAAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	157997669	157968717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_-_157969030_157994616_157994674_157997569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017337	chr3	+	220	1	FSM	ENSMUSG00000104864.2	ENSMUST00000197367.2	222	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAGGTTGAAGATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	159197056	159197276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr3_+_159197100_159197300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017338	chr3	+	2216	5	ISM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	72098	-7	72033	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGAGGTGTCTCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	159617406	159641666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr3_+_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017339	chr4	-	665	1	Genic_Genomic	ENSMUSG00000028232.14	novel	NA	NA	NA	NA	14563	10	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTGGAGAATTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	3549695	3549030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_3549000_3549700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017340	chr4	-	467	4	FSM	ENSMUSG00000028232.14	ENST00000523073.5	468	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAACATTAGGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	3564257	3550532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_3550580_3554353_3554415_3560498_3560693_3564092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017341	chr4	-	450	4	NNC	ENSMUSG00000028232.14	novel	468	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAACATTAGGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	3564243	3550532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_3550580_3554353_3554415_3560501_3560693_3564092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017342	chr4	+	650	2	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	10181	30651	10181	-30651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAGCCTGAAAGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	3585055	3585968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_3585189_3585451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017343	chr4	+	796	3	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	10800	25305	10800	-25305	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTATTCATAAGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	3585674	3591314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_3586266_3589146_3589265_3591227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017344	chr4	+	655	2	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	30948	1185	30948	-1185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGTAAGTAATTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	3605822	3615434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_3605902_3614858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017345	chr4	+	633	1	ISM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	41112	0	41112	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTGTTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3615986	3616619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_3616000_3616600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017346	chr4	+	760	2	ISM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	104905	1184	104905	-1184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCCCAGAAAATGAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	3783031	3790428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_3783105_3789741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017347	chr4	+	723	1	ISM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	112776	0	112764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATCTTGTCTTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	3790890	3791613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_3790900_3791600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017348	chr4	-	2697	1	Genic_Genomic	ENSMUSG00000028234.7	novel	NA	NA	NA	NA	1266	4	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGCTCATGTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	3834026	3831329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_3831300_3834000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017349	chr4	-	3044	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	3	659	3	-659	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTAAGAACTTACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	3835662	3831992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017350	chr4	-	2697	3	NNC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	15	-817	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTGAATCTATGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	3835277	3832150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_3834684_3834935_3835010_3835187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017351	chr4	-	203	1	NIC	ENSMUSG00000028234.7	novel	3706	4	NA	NA	604	8	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTAATGGTCAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	3834688	3834485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_3834500_3834700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017352	chr4	-	548	4	FSM	ENSMUSG00000028234.7	ENST00000521262.5	546	4	5	-7	5	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTCTTAATGGTCAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	3835544	3834486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017353	chr4	-	169	2	ISM	ENSMUSG00000028234.7	ENST00000519606.5	356	3	257	122	0	-122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATCCACAAGCGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	3835292	3834615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_3834684_3835191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017354	chr4	-	449	4	ISM	ENSMUSG00000028234.7	ENST00000488192.1	538	5	-1	342	-1	-342	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAAGTTATTAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3855763	3834835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_3835010_3835191_3835292_3835483_3835559_3855663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017355	chr4	-	1282	1	ISM	ENSMUSG00000003282.10	ENSMUST00000003369.10	4774	6	33556	2549	33556	3	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCTCTTCGATAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	3904826	3903544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_3903500_3904800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017356	chr4	-	1162	3	FSM	ENSMUSG00000003282.10	ENST00000423799.6	1677	3	8	507	-3	-365	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCTAGGGTTAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	3938385	3904054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_3904948_3908905_3909003_3938213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017357	chr4	-	1201	2	ISM	ENSMUSG00000003282.10	ENST00000429357.2	1894	4	32595	409	32584	-409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGTGCACCATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3905798	3904098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_3904948_3905446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017358	chr4	+	622	5	FSM	ENSMUSG00000042198.13	ENSMUST00000121651.8	620	5	3	-5	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3938916	3943526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3943387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017359	chr4	+	567	3	FSM	ENSMUSG00000042198.13	ENSMUST00000119403.2	695	3	129	-1	129	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3940982	3943526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_3941312_3942720_3942820_3943387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017360	chr4	+	175	2	FSM	ENSMUSG00000042198.13	ENST00000519367.1	213	2	4	34	4	-34	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCTTGAAGTACAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	3941244	3942785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_3941312_3942677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017361	chr4	+	116	1	NIC	ENSMUSG00000042198.13	novel	524	5	NA	NA	1463	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCCAACTTCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	3942703	3942819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_3942700_3942800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017362	chr4	+	135	1	ISM	ENSMUSG00000042198.13	ENSMUST00000121110.8	381	4	4504	2	2151	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3943391	3943526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_3943400_3943500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017363	chr4	-	467	1	FSM	ENSMUSG00000068240.6	ENSMUST00000089430.6	504	1	38	-1	38	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATCCAAGGCTACATCT	NA	NA	NA	NA	NA	NA	NA	NA	3973557	3973090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_3973100_3973600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017364	chr4	-	922	6	FSM	ENSMUSG00000071019.12	ENST00000524136.6	924	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTGACCATGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	4076867	4056773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_4056905_4058760_4058887_4062618_4062764_4063220_4063321_4069885_4070011_4076572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017365	chr4	-	888	6	FSM	ENSMUSG00000071019.12	ENSMUST00000095151.12	1834	6	101	845	39	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTGACCATGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	4076830	4056773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_4056905_4058760_4058887_4062618_4062764_4063220_4063321_4069885_4070018_4076576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017366	chr4	-	616	3	ISM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	258	13848	258	-13848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTGAATATACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	4793097	4776331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_4776410_4778192_4778356_4792722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017367	chr4	+	1477	1	ISM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	155504	0	26746	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTGATTTCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5799624	5801101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_5799600_5801100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017368	chr4	+	127	1	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTCCAGCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	6354158	6354285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_+_6354200_6354300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017369	chr4	+	423	4	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	11425	11096	-9	-9377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATATTTTTGAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	6377074	6385188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_6377143_6378965_6379048_6380989_6381100_6385025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017370	chr4	+	537	4	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	13310	9575	1876	-7856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTGCTACCACCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	6378959	6386709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_6379048_6380989_6381100_6385025_6385188_6386532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017371	chr4	+	544	4	ISM	ENSMUSG00000028249.16	ENST00000447267.4	747	7	1879	1447	1879	-1447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGACTCACATGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	6378962	6393118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_6379048_6380989_6381100_6386532_6386709_6392945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017372	chr4	+	610	4	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	15351	3166	3917	-1447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGACTCACATGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	6381000	6393118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_6381100_6385025_6385188_6386532_6386709_6392945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017373	chr4	+	1836	6	ISM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	15332	0	3925	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6381008	6395655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017374	chr4	+	495	1	Genic_Genomic	ENSMUSG00000028249.16	novel	NA	NA	NA	NA	18709	3	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGACTTAATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	6395792	6396287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_6395800_6396300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017375	chr4	-	1753	1	ISM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	93927	0	93927	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTTGCTTTGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	8145114	8143361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_8143400_8145100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017376	chr4	-	1873	2	ISM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	69273	1155	69273	-1155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGACCATTTAAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	8169768	8144516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_8146217_8169595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017377	chr4	+	2130	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTAATGGCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	8535646	8607778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017378	chr4	-	492	1	ISM	ENSMUSG00000028207.19	ENSMUST00000108333.8	2652	14	67959	0	67812	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	9575758	9575266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_9575300_9575800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017379	chr4	-	277	3	ISM	ENSMUSG00000028207.19	ENST00000389204.8	300	4	4214	-4	4214	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTCTTCTTTCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	9639356	9635896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_9635970_9637658_9637704_9639197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017380	chr4	-	186	2	ISM	ENSMUSG00000028207.19	ENST00000389204.8	300	4	0	3297	0	-3297	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACTAGGGTATGATT	NA	NA	NA	NA	NA	NA	NA	NA	9643570	9639197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_9639348_9643534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017381	chr4	+	663	1	FSM	ENSMUSG00000066315.10	ENSMUST00000120234.2	636	1	37	-64	37	64	mono-exon	FALSE	NA	NA	NA	NA	NA	796	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCATGATTTAAAGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10848456	10849119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_10848500_10849100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017382	chr4	+	276	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	10855440	10855716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_+_10855400_10855700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017383	chr4	+	1206	3	ISM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	7907	481	7837	-481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTTCAAGAAATGCATT	NA	NA	NA	NA	NA	NA	NA	NA	10882404	10898940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_10882473_10893262_10893359_10897898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017384	chr4	+	1061	1	Genic_Genomic	ENSMUSG00000059482.16	novel	NA	NA	NA	NA	23798	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTCTGTGCAATTATA	NA	NA	NA	NA	NA	NA	NA	NA	10898365	10899426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_10898400_10899400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017385	chr4	-	1327	1	ISM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	17688	0	17688	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	NA	NA	NA	NA	NA	NA	NA	NA	10989988	10988661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_10988700_10990000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017386	chr4	-	1412	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	22	1543	22	-1543	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACAGAGCATGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	11007654	10990204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_10991355_11007392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017387	chr4	-	457	5	ISM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	6536	0	6536	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTTCAGTGGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	11066709	11053429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017388	chr4	-	512	5	ISM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	2918	5594	2918	-5594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTAAAGCATGTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	11070327	11059023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017389	chr4	-	490	5	ISM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	0	7464	0	-7464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTTCCTGCCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	11073245	11060893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017390	chr4	+	282	2	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	10487	1547	10487	-1540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAAATGAGTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	11202216	11203135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_11202348_11202984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017391	chr4	-	1428	2	ISM	ENSMUSG00000040738.11	ENST00000523731.6	4438	28	49667	-1	49667	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTACATGTGAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	11204491	11202986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11203242_11203318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017392	chr4	-	878	1	ISM	ENSMUSG00000040728.16	ENST00000454170.7	3372	15	53741	0	53741	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGCACTCTTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	11332810	11331932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11331900_11332800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017393	chr4	+	584	2	Antisense	novelGene_ENSMUSG00000040728.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGGAAAATATTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	11332309	11332982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_+_11332816_11332904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017394	chr4	-	910	2	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	53143	110	53138	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGTTAGAGCGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	11333413	11332411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11332811_11332902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017395	chr4	+	343	2	Antisense	novelGene_ENSMUSG00000040728.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGATGCCACGTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	11332760	11333198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_+_11332816_11332910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017396	chr4	-	676	2	ISM	ENSMUSG00000040728.16	ENST00000423620.6	3651	16	42464	969	42336	103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCAGTGCTAAAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	11344215	11332901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11333474_11344111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017397	chr4	-	779	3	ISM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	28991	668	28986	35	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCCATCATGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	11357565	11332969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11333474_11353294_11353464_11357459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017398	chr4	-	407	3	ISM	ENSMUSG00000040728.16	ENST00000454170.7	3372	15	28889	1494	28889	-422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGCAATTTCAGGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	11357662	11333426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11333474_11353294_11353464_11357471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017399	chr4	-	438	3	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	26720	20430	26592	-20430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCACGGCTGTGATTCC	NA	NA	NA	NA	NA	NA	NA	NA	11359959	11353434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11353464_11357471_11357659_11359737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017400	chr4	-	569	3	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	25422	24608	25294	-24608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTCATGGCTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	11361257	11357612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11357659_11359737_11359957_11360953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017401	chr4	-	646	5	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	19717	27947	19589	-27947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTAGAGCCTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	11366962	11360951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017402	chr4	-	344	4	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	7272	32407	7144	-32407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGCAAGGTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	11379407	11365411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11365485_11366907_11366963_11367084_11367184_11379290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017403	chr4	-	406	4	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	955	34080	827	-34080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCACGGTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	11385724	11367084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11367184_11379290_11379406_11384348_11384463_11385646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017404	chr4	-	674	4	ISM	ENSMUSG00000040728.16	ENSMUST00000108310.8	2781	16	7	46338	7	-46338	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGGCTCTCCCGATAT	NA	NA	NA	NA	NA	NA	NA	NA	11386672	11379342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_11379406_11384348_11384463_11385646_11385776_11386304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017405	chr4	+	1065	1	Genic_Genomic	ENSMUSG00000040720.16	novel	NA	NA	NA	NA	63582	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTATGAGTCTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	11549624	11550689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_11549600_11550700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017406	chr4	+	309	1	Genic_Genomic	ENSMUSG00000078773.12	novel	NA	NA	NA	NA	19678	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACGTACGATACAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	11578649	11578958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_11578600_11579000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017407	chr4	+	250	2	ISM	ENSMUSG00000028214.14	ENSMUST00000108304.9	2006	5	24	8684	24	-8684	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGGCGGAGCTGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	11704480	11706068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_11704567_11705904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017408	chr4	+	200	1	ISM	ENSMUSG00000028214.14	ENSMUST00000108304.9	2006	5	10096	0	8746	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTGCTATCCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	11714552	11714752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_11714600_11714800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017409	chr4	-	3736	1	Genic_Genomic	ENSMUSG00000049225.15	novel	NA	NA	NA	NA	3903	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGAAATCTGGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	11961918	11958182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_11958200_11961900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017410	chr4	-	3859	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	5	337	5	-337	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTGTTTTATTTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	11966447	11958520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_11962234_11966301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017411	chr4	+	1967	1	Genic_Genomic	ENSMUSG00000052137.12	novel	NA	NA	NA	NA	4846	10	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGAAATACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	12094286	12096253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_12094300_12096300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017412	chr4	-	360	1	Genic_Genomic	ENSMUSG00000028218.20	novel	NA	NA	NA	NA	17447	1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCTGGTATGAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	12153767	12153407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_12153400_12153800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017413	chr4	-	1048	7	FSM	ENSMUSG00000028218.20	ENST00000620645.1	821	7	-9	-218	-9	42	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTCTATATATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	12171223	12153680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017414	chr4	-	591	3	ISM	ENSMUSG00000028218.20	ENSMUST00000087052.11	1292	8	0	15252	0	-15077	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAGCGAGTAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	12171995	12168975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_12169034_12170983_12171219_12171697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017415	chr4	+	1749	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	67	-697	67	697	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATTAAGATTACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	12232899	12234648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_12232900_12234600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017416	chr4	+	1619	2	Genic_Genomic	ENSMUSG00000060989.9	novel	1119	1	NA	NA	338	982	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGCAAACTGGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	12233170	12234933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_12233632_12233775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017417	chr4	+	3466	4	ISM	ENSMUSG00000055963.13	ENSMUST00000183345.2	3545	5	11056	0	11056	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAATTTAGCATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	12917913	12983553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_12918066_12962944_12963024_12974729_12974816_12980404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017418	chr4	+	151	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	14434355	14434506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_+_14434400_14434500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017419	chr4	-	1396	1	Genic_Genomic	ENSMUSG00000040550.18	novel	NA	NA	NA	NA	15619	2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAATTGTCATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	14810891	14809495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_14809500_14810900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017420	chr4	-	1391	2	ISM	ENSMUSG00000040550.18	ENST00000615618.1	1328	8	13949	-1031	13949	-960	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATGGGGACACAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	14812561	14810466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_14811749_14812452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017421	chr4	-	161	2	ISM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	3817	8900	3740	-6909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAGTGAAAAACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	14822770	14818406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_14818489_14822691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017422	chr4	+	743	3	ISM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	38410	855	38410	-855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAACCTAAGAGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	14902485	14914321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_14902540_14912431_14912523_14913723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017423	chr4	+	663	1	Genic_Genomic	ENSMUSG00000028221.4	novel	NA	NA	NA	NA	50450	12	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATAAATGTATAAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	14914525	14915188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_14914500_14915200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017424	chr4	+	2575	2	FSM	ENSMUSG00000043252.9	ENST00000418210.2	4388	2	18	1795	18	-1795	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGTCCTTACTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	15265969	15284953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_15266750_15283158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017425	chr4	+	269	2	ISM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	15200	3458	15079	-3453	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTACAACAAGAGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	15281030	15283295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_15281163_15283158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017426	chr4	+	1864	1	ISM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	19059	0	18938	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTCTTCTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	15284889	15286753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_15284900_15286800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017427	chr4	-	1793	1	Genic_Genomic	ENSMUSG00000028223.9	novel	NA	NA	NA	NA	26479	4	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAGAGGTTGCATCATC	NA	NA	NA	NA	NA	NA	NA	NA	15919028	15917235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_15917200_15919000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017428	chr4	-	2028	4	ISM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	22950	110	22950	-110	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTAGTGCCAACAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	15922557	15917349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017429	chr4	-	2087	3	ISM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	8418	-1	8418	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCCCTTTCCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	16005470	15997119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_15999001_16001929_16002022_16005356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017430	chr4	-	585	1	Genic_Genomic	ENSMUSG00000041135.16	novel	NA	NA	NA	NA	40331	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGGTAATTAGCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	16123316	16122731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_16122700_16123300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017431	chr4	-	773	3	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	35934	641	35934	-641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTAGTTCAGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	16127713	16123373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_16123892_16124424_16124587_16127620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017432	chr4	-	562	2	ISM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	16	35544	16	-35544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTGCTTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	16163631	16158276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_16158431_16163223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017433	chr4	+	325	1	Genic_Genomic	ENSMUSG00000028226.16	novel	NA	NA	NA	NA	265378	15	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAGCAATTTATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	18118835	18119160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_18118800_18119200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017434	chr4	-	825	1	Genic_Genomic	ENSMUSG00000028228.6	novel	NA	NA	NA	NA	50032	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCTGTGTTTGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	19520076	19519251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_19519300_19520100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017435	chr4	-	859	2	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	45016	3272	45016	-3272	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAACTTCTGTGGGCATC	NA	NA	NA	NA	NA	NA	NA	NA	19525092	19522525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_19523295_19525002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017436	chr4	+	1235	3	ISM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	16085	7	16085	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTCTCCACTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	20058136	20066743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_20058230_20063998_20064137_20065739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017437	chr4	+	1014	1	Genic_Genomic	ENSMUSG00000073987.5	novel	NA	NA	NA	NA	23686	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGTTTTTGAAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	20065737	20066751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_20065700_20066800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017438	chr4	+	147	2	ISM	ENSMUSG00000028252.21	ENST00000523799.5	987	12	4	17811	4	-17477	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTTTTTACAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	21727647	21730485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21727706_21730396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017439	chr4	+	184	2	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	2642	15668	2589	-15668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTAGGTATGGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	21730396	21732294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21730504_21732217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017440	chr4	+	157	2	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	4462	15403	4409	-15403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAACAATTTTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	21732216	21732559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21732303_21732488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017441	chr4	+	120	2	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	4736	12494	4683	-12494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGCAAAAAGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	21732490	21735468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21732559_21735416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017442	chr4	+	104	2	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	7660	7321	7607	-7321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATGTAAGTATGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	21735414	21740641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21735469_21740591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017443	chr4	+	129	2	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	14200	5257	14147	-5257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTAGACCAGAAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	21741954	21742705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21741991_21742612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017444	chr4	+	161	2	ISM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	14857	4648	14804	-4648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAAAATTTGCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	21742611	21743314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21742705_21743246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017445	chr4	+	1108	5	ISM	ENSMUSG00000028252.21	ENST00000369220.8	1957	12	14804	336	14804	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTATTTGCAACTAATT	NA	NA	NA	NA	NA	NA	NA	NA	21742611	21748887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21742705_21743249_21743315_21746349_21746430_21746655_21746775_21748136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017446	chr4	+	150	1	ISM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	20448	2248	20341	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTGGGAATTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	21748148	21748298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21748100_21748300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017447	chr4	+	783	1	ISM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	20743	1320	20636	3	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGTTTTGCACCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	21748443	21749226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21748400_21749200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017448	chr4	-	1587	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATGTATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	21767211	21757381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017449	chr4	+	328	2	ISM	ENSMUSG00000028248.16	ENSMUST00000108229.2	2922	8	11094	10351	11088	-10351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCTATTTAAATCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	21859151	21860991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21859308_21860819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017450	chr4	+	347	2	ISM	ENSMUSG00000028248.16	ENSMUST00000108229.2	2922	8	12772	9171	12766	-9171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTAAGTAGAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	21860829	21862171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21860992_21861986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017451	chr4	+	2242	3	ISM	ENSMUSG00000028248.16	ENSMUST00000098238.9	4407	11	22305	857	22296	-857	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTGACACTAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	21870359	21875610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21870406_21871437_21871609_21873585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017452	chr4	+	2093	1	Genic_Genomic	ENSMUSG00000028248.16	novel	NA	NA	NA	NA	26653	4	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTGAAAAATGAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	21874716	21876809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_21874700_21876800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017453	chr4	+	1834	3	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	20641	263	1222	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTGATCTTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	21900313	21911899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21900507_21908482_21908643_21910418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017454	chr4	+	178	1	ISM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	30746	1566	11327	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCCGGTAGCCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	21910418	21910596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_21910400_21910600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017455	chr4	+	1526	1	Genic_Genomic	ENSMUSG00000028247.3	novel	NA	NA	NA	NA	11546	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGCCATTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21910637	21912163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_21910600_21912200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017456	chr4	-	462	1	ISM	ENSMUSG00000040387.17	ENSMUST00000108214.9	5970	8	184210	3665	127287	1	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTAATCTTGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	24616680	24616218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24616200_24616700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017457	chr4	-	742	3	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	114611	876	114611	177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTAGTGCTGTCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	24629356	24617095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24617547_24626896_24626987_24629155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017458	chr4	-	358	3	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	111256	10675	111256	-9622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTTGAAGTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24632711	24626894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24626987_24629155_24629353_24632642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017459	chr4	-	678	3	ISM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	142829	12945	93997	-11892	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCAAGTATCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24649970	24629164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24629353_24632642_24632702_24649539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017460	chr4	-	351	3	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	61723	13031	61723	-11978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATAATGACCGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	24682244	24629250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24629353_24632642_24632702_24682054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017461	chr4	-	837	3	ISM	ENSMUSG00000040387.17	ENST00000539200.5	2799	7	11	33598	11	-32545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGGACATGTGCCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	24792788	24649817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24650267_24682054_24682271_24792616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017462	chr4	-	415	3	ISM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	48842	65835	10	-64782	internal_fragment	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACATGGTGCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24743957	24682054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24682271_24708952_24709052_24743857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017463	chr4	-	305	3	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	32350	66015	32350	-64962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGACCTCTTTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	24711617	24682234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24682271_24708952_24709052_24711447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017464	chr4	-	150	2	ISM	ENSMUSG00000040387.17	ENST00000536676.5	2898	8	133	92732	133	-91679	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGCTTGCATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24792666	24708951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24709052_24792616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017465	chr4	-	390	3	ISM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	1	92732	1	-91679	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGCTTGCATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24792798	24708951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24709052_24743857_24743966_24792616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017466	chr4	-	264	2	NNC	ENSMUSG00000040387.17	novel	2266	8	NA	NA	32354	-91679	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGCTTGCATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24711613	24708951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_24709052_24711449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017467	chr4	-	282	2	ISM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	1	95223	1	-94170	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTGACCCCCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	24743966	24711442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_24711616_24743857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017468	chr4	+	747	2	FSM	ENSMUSG00000087399.2	ENSMUST00000142373.2	745	2	23	-25	23	25	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTATCAGCCAAAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	24792702	24800335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_24792900_24799785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017469	chr4	+	819	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	113	2700	113	-2700	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAGGGAAACACAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24898195	24902301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_24898303_24898572_24898677_24901693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017470	chr4	+	690	1	Genic_Genomic	ENSMUSG00000028261.14	novel	NA	NA	NA	NA	6230	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCCTGCCTACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	24904312	24905002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_24904300_24905000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017471	chr4	-	179	1	Genic_Genomic	ENSMUSG00000040359.15	novel	NA	NA	NA	NA	33039	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTATGTTATACAGT	NA	NA	NA	NA	NA	NA	NA	NA	25248782	25248603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_25248600_25248800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017472	chr4	-	204	2	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	30412	1954	30412	-1954	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCTACTCGGAAAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	25251409	25250558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_25250689_25251335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017473	chr4	-	183	2	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	27131	3724	27131	-3724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTCCATAACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25254690	25252328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_25252380_25254558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017474	chr4	-	197	2	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	26904	6035	26904	-6035	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCACTAACCTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	25254917	25254639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_25254690_25254770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017475	chr4	-	187	2	NNC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	25713	-6258	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAACGCACAATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25256108	25254862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_25254935_25255993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017476	chr4	-	181	2	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	16313	13627	16313	-13627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGAACGCAGGAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	25265508	25262231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_25262327_25265422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017477	chr4	-	247	2	ISM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	3718	27200	3718	-27200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATGTCTCCAAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	25278103	25275804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_25275937_25277988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017478	chr4	-	1439	4	FSM	ENSMUSG00000040520.8	ENST00000358812.9	1445	4	10	-4	10	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACTAGCTTAAGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	26340987	26327628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_26328309_26329085_26329163_26336620_26336728_26340412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017479	chr4	-	694	1	NIC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	12674	3	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTACTAGCTTAAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	26328323	26327629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_26327600_26328300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017480	chr4	-	1327	3	FSM	ENSMUSG00000040520.8	ENST00000683151.1	1368	3	42	-1	42	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTCTACTAGCTTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	26340955	26327631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_26328309_26336620_26336728_26340412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017481	chr4	-	839	3	NIC	ENSMUSG00000040520.8	novel	1368	3	NA	NA	311	-221	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCCATCACCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26340686	26327853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_26328309_26336620_26336731_26340412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017482	chr4	-	757	3	NIC	ENSMUSG00000040520.8	novel	1445	4	NA	NA	8	-1460	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAAGTGAGTTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	26340989	26329092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_26329163_26336620_26336731_26340412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017483	chr4	+	469	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGGAATCCTCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	32800248	32801383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_32800336_32800609_32800751_32801142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017484	chr4	+	232	1	FSM	ENSMUSG00000094344.2	ENSMUST00000180255.2	345	1	183	-70	183	70	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTCTCAGCTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	32965070	32965302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_32965100_32965300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017485	chr4	+	2670	4	ISM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	9940	368	9940	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCTCCTAGAAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	33041355	33051995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33041462_33043856_33043987_33045079_33045200_33049681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017486	chr4	+	2350	2	ISM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	13652	464	13652	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAGCACCTGATACAC	NA	NA	NA	NA	NA	NA	NA	NA	33045067	33051899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33045200_33049681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017487	chr4	+	2363	1	Genic_Genomic	ENSMUSG00000028277.14	novel	NA	NA	NA	NA	18586	1	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTGGTGTTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	33050001	33052364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_33050000_33052400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017488	chr4	+	936	6	ISM	ENSMUSG00000028280.10	ENST00000435811.5	1919	9	96	4944	-57	-4944	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCGGAGCATGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	33132463	33158178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33132776_33148920_33149028_33151368_33151437_33152412_33152637_33157059_33157143_33158036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017489	chr4	+	433	4	ISM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	14313	10507	14313	-10507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTGCTCTACAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	33146935	33152615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33146991_33148920_33149028_33151368_33151437_33152412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017490	chr4	+	450	4	ISM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	19808	2986	19808	-2986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAACTTCACTCTGCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	33152430	33160136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017491	chr4	+	1029	4	ISM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	25414	0	25414	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACATATGGACATGTCG	NA	NA	NA	NA	NA	NA	NA	NA	33158036	33163122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33158178_33160116_33160270_33161629_33161827_33162584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017492	chr4	+	432	1	ISM	ENSMUSG00000028280.10	ENST00000435811.5	1919	9	30323	0	30068	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACATATGGACATGTCG	NA	NA	NA	NA	NA	NA	NA	NA	33162690	33163122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33162700_33163100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017493	chr4	-	494	1	Genic_Genomic	ENSMUSG00000040128.10	novel	NA	NA	NA	NA	2595	1	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCTTTTTGTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	33245915	33245421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_33245400_33245900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017494	chr4	-	849	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	150	649	150	-649	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTAGGCTTGCGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	33248360	33246071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_33246508_33247947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017495	chr4	+	1199	2	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	188640	1302	188640	-1302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGGACAGATGCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	33498950	33501312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33499075_33500237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017496	chr4	+	1201	1	ISM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	191103	0	191103	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTTCCTGTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	33501413	33502614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_33501400_33502600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017497	chr4	-	157	1	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	43961	0	43961	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34570952	34570795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_34570800_34571000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017498	chr4	-	188	2	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	39803	1668	39803	-1668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGTCACAAAGAACAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	34575110	34572463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_34572573_34575031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017499	chr4	-	810	3	FSM	ENSMUSG00000071015.3	ENST00000608326.1	809	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTGCTATGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	34752400	34743790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_34744289_34746455_34746652_34752284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017500	chr4	-	691	2	NNC	ENSMUSG00000071015.3	novel	809	3	NA	NA	5747	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTTGTTGCTATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	34746653	34743791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_34744285_34746455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017501	chr4	-	785	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGAGTTTTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34778421	34768662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_34769148_34771257_34771415_34778278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017502	chr4	-	780	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGAGTTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34778362	34768663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_34769148_34771257_34771415_34778223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017503	chr4	-	765	4	ISM	ENSMUSG00000040296.16	ENST00000679859.1	1181	7	25341	0	25341	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTCTCGTGCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	40210039	40205802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40206107_40208446_40208595_40208770_40208923_40209878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017504	chr4	-	2552	1	ISM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	7698	0	7698	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGCAACATTGATT	NA	NA	NA	NA	NA	NA	NA	NA	40262152	40259600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40259600_40262200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017505	chr4	-	2686	2	ISM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	1342	1000	1342	-1000	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATAATACTTCACGGTC	NA	NA	NA	NA	NA	NA	NA	NA	40268508	40260600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40263082_40268303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017506	chr4	+	418	1	Genic_Genomic	ENSMUSG00000028407.5	novel	NA	NA	NA	NA	949	5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTTCTTTACATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	40270527	40270945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_40270500_40270900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017507	chr4	-	661	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTAGCTACTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	40279422	40270589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017508	chr4	-	170	1	ISM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	8587	74	8575	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCACTGTCCGTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	40270834	40270664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40270700_40270800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017509	chr4	-	748	1	Genic_Genomic	ENSMUSG00000028411.16	novel	NA	NA	NA	NA	14222	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTCATGCTTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40683125	40682377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_40682400_40683100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017510	chr4	-	4955	4	ISM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	2208	-4190	2208	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTCATGCTTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40695139	40682377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40686714_40688108_40688213_40690968_40691196_40694851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017511	chr4	-	150	1	NIC	ENSMUSG00000028411.16	novel	5383	8	NA	NA	10632	2	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTGACACTCGTCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	40686715	40686565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_40686600_40686700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017512	chr4	-	656	4	ISM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	1922	1550	1922	-1550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACAAGGTAAATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	40695425	40688117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40688213_40690968_40691196_40694851_40695137_40695376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017513	chr4	-	676	4	ISM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	14	4401	14	-4401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCCTTGGGGTGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	40697333	40690968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40691196_40694851_40695137_40695376_40695424_40697216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017514	chr4	-	424	3	ISM	ENSMUSG00000028411.16	ENST00000436040.7	838	6	2324	4436	2324	-4436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGATTGGGCTACCATGC	NA	NA	NA	NA	NA	NA	NA	NA	40695023	40691003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40691196_40693389_40693450_40694851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017515	chr4	-	165	2	ISM	ENSMUSG00000028411.16	ENST00000436040.7	838	6	2400	6813	2400	-6813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTATACTTTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	40694947	40693380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40693450_40694851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017516	chr4	-	305	2	ISM	ENSMUSG00000028411.16	ENST00000436040.7	838	6	-3	8283	-3	-8283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATGGTGTGCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	40697350	40694850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40695022_40697216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017517	chr4	+	3045	7	ISM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	1528	0	1086	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCTGTTCAGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	40724007	40734964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017518	chr4	-	640	1	Genic_Genomic	ENSMUSG00000028409.12	novel	NA	NA	NA	NA	20744	2	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCATGTTGATGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	40737179	40736539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_40736500_40737200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017519	chr4	-	1043	4	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	14781	260	14781	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATGAAAAAGTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	40743142	40736801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017520	chr4	-	618	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	9296	2988	9296	-2988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGGCCAGGTGAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	40748627	40739529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017521	chr4	-	604	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	4327	7489	4327	-7489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGAATCCCTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	40753596	40744030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017522	chr4	-	642	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	2086	12079	2086	-12079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATGGTCAGTATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	40755837	40748620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017523	chr4	-	664	5	ISM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	61	15409	61	-15409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACACAGTTGAGCAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	40757862	40751950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017524	chr4	-	360	1	ISM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	49044	0	49044	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCTTTTCTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	40804961	40804601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40804600_40805000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017525	chr4	-	453	2	ISM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	46165	2371	46165	2181	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTCAGCCCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	40807840	40806972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40807318_40807732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017526	chr4	-	548	3	ISM	ENSMUSG00000028413.14	ENSMUST00000108096.3	1413	5	30330	525	30330	-525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGCTCACAGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40823675	40809678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40809802_40812684_40812873_40823438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017527	chr4	-	531	2	ISM	ENSMUSG00000028413.14	ENSMUST00000108096.3	1413	5	278	14327	278	-14327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGCCAGCAACTCGACTA	NA	NA	NA	NA	NA	NA	NA	NA	40853727	40823480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_40823675_40853390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017528	chr4	-	1341	7	FSM	ENSMUSG00000028416.14	ENSMUST00000108089.8	1336	7	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTGGTGGTGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	40948282	40936393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017529	chr4	-	283	1	NIC	ENSMUSG00000028416.14	novel	1336	7	NA	NA	11563	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTCTGTGGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	40936680	40936397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_40936400_40936700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017530	chr4	+	533	5	ISM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	56	12249	4	-12249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCGATCTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	40948462	40953054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017531	chr4	+	755	4	ISM	ENSMUSG00000028419.6	ENST00000419016.6	1415	7	3909	290	3909	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATGGGTTTAAGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	40952367	40965074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_40952462_40952981_40953054_40958889_40958999_40964594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017532	chr4	+	297	3	ISM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	4574	4330	4522	-4330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTTGCCCTTAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	40952980	40960973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_40953054_40958889_40958999_40960858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017533	chr4	+	348	3	ISM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	10528	538	10476	-538	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGCTCCTGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40958934	40964765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_40958999_40960858_40960972_40964594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017534	chr4	+	557	1	Genic_Genomic	ENSMUSG00000028419.6	novel	NA	NA	NA	NA	16364	15	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTCAGCTTGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	40964822	40965379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_40964800_40965400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017535	chr4	+	153	2	ISM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	83	36174	83	-36174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAGATTCTAGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	40970988	40976434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_40971060_40976352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017536	chr4	-	647	4	ISM	ENSMUSG00000028427.14	ENSMUST00000054945.8	2154	6	9310	1633	9310	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCAGAGGAGTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	41036138	41034706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41034972_41035134_41035254_41035492_41035631_41036013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017537	chr4	-	267	1	NIC	ENSMUSG00000028427.14	novel	2154	6	NA	NA	10475	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCAGAGGAGTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	41034973	41034706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_41034700_41035000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017538	chr4	-	498	4	ISM	ENSMUSG00000028427.14	ENSMUST00000054945.8	2154	6	53	2060	53	-427	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGCCAGGGAATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	41045395	41035133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41035254_41035492_41035631_41036013_41036138_41045279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017539	chr4	-	616	4	ISM	ENSMUSG00000028427.14	ENST00000624075.3	1019	6	12	793	12	-793	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGGTGAGCAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	41048054	41035499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41035631_41036013_41036138_41045279_41045398_41047811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017540	chr4	-	339	2	ISM	ENSMUSG00000028427.14	ENST00000624075.3	1019	6	44	10563	44	-10563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGCCTTGGGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	41048022	41045269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41045398_41047811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017541	chr4	-	736	5	FSM	ENSMUSG00000028435.9	ENST00000645858.1	737	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGACCAGTCCCCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	41098129	41093478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41093703_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017542	chr4	+	198	2	ISM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	47501	4130	47501	-4130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGGAAAAGACAAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	41183243	41189250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_41183343_41189151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017543	chr4	+	180	2	ISM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	53491	2649	53491	-2649	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTATGACGACGACAT	NA	NA	NA	NA	NA	NA	NA	NA	41189233	41190731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_41189287_41190604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017544	chr4	+	213	1	ISM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	57425	0	57425	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTATTGCTATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	41193167	41193380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_41193200_41193400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017545	chr4	-	406	1	ISM	ENSMUSG00000028433.15	ENSMUST00000108068.8	4380	29	80426	0	80417	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	41194718	41194312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41194300_41194700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017546	chr4	-	369	2	ISM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	79650	714	79650	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACCCTCTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	41195485	41195029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41195247_41195333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017547	chr4	-	172	1	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	23418	0	23418	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGAGTGACTATATA	NA	NA	NA	NA	NA	NA	NA	NA	41291471	41291299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41291300_41291500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017548	chr4	-	176	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	20805	1891	20805	-1891	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTCGGACATTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	41294084	41293190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41293215_41293932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017549	chr4	-	230	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	18468	2693	18468	-2693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCCAAGCCCAGACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	41296421	41293992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41294112_41296310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017550	chr4	-	308	3	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	15345	5070	15345	-5070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCCACGGCAGCCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	41299544	41296369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41296474_41298285_41298352_41299406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017551	chr4	-	204	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	13495	8158	13495	-8158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCGGACAACTGCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	41301394	41299457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41299601_41301333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017552	chr4	-	177	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	1586	11437	1586	-11437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGGTATCCATGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	41313303	41302736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41302821_41313210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017553	chr4	-	119	1	FSM	ENSMUSG00000087938.4	ENSMUST00000157313.4	108	1	-5	-6	-5	6	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATATGATTGGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	41312203	41312084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41312100_41312200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017554	chr4	-	219	2	ISM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	248	22101	248	-22101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCTGAAGAACCGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	41314641	41313400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41313466_41314487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017555	chr4	+	1109	2	ISM	ENSMUSG00000028437.15	ENST00000625521.2	1961	6	29942	1721	29942	-1721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTGCTGGTCTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	41378944	41387357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_41379871_41387174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017556	chr4	+	1370	3	ISM	ENSMUSG00000028437.15	ENST00000625521.2	1961	6	38172	-687	38172	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTGCCTTAACCT	NA	NA	NA	NA	NA	NA	NA	NA	41387174	41389765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_41387358_41388095_41388198_41388680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017557	chr4	+	1124	1	Genic_Genomic	ENSMUSG00000028437.15	novel	NA	NA	NA	NA	40402	3	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCTTAAATGTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	41389404	41390528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_41389400_41390500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017558	chr4	+	846	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATGCTTTCTTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	41465150	41480927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_41465181_41477513_41477648_41480245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017559	chr4	+	686	1	Genic_Genomic	ENSMUSG00000028443.7	novel	NA	NA	NA	NA	15091	1	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGATGCTTTCTTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	41480241	41480927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_41480200_41480900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017560	chr4	-	168	1	NIC	ENSMUSG00000028441.13	novel	1114	7	NA	NA	2449	0	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCTGTGTCCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	41505176	41505008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_41505000_41505200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017561	chr4	-	434	3	ISM	ENSMUSG00000028441.13	ENSMUST00000030152.13	1114	7	10046	2	338	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGCTGTGTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	41507287	41505010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41505169_41505567_41505655_41507098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017562	chr4	-	287	2	ISM	ENSMUSG00000028441.13	ENST00000379124.5	582	4	-6	2142	-6	-2142	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGAGCCTAGCACAGAACG	NA	NA	NA	NA	NA	NA	NA	NA	41507631	41507152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41507329_41507520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017563	chr4	-	771	4	FSM	ENSMUSG00000028439.15	ENST00000379078.1	765	4	-3	-3	-3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGTGGGTTTTGGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	41569522	41521470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41521693_41521866_41521970_41524314_41524415_41569176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017564	chr4	-	451	1	ISM	ENSMUSG00000028445.8	ENSMUST00000127306.2	1269	2	1730	0	1730	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCCTTTATTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	41638594	41638143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_41638100_41638600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017565	chr4	+	308	2	FSM	ENSMUSG00000084761.2	ENST00000439960.1	330	2	25	-3	25	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTTTCCCTGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	41638698	41639496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_41638891_41639380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017566	chr4	+	209	2	NNC	ENSMUSG00000084761.2	novel	330	2	NA	NA	42	-82	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGCCAGCTCACACAGA	NA	NA	NA	NA	NA	NA	NA	NA	41638715	41639411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_41638874_41639360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017567	chr4	-	617	2	FSM	ENSMUSG00000028445.8	ENSMUST00000127306.2	1269	2	76	576	76	-576	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTCTCGGAATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	41640248	41638719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41639002_41639913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017568	chr4	+	198	2	NNC	ENSMUSG00000084761.2	novel	330	2	NA	NA	132	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTTTCCCTGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	41638805	41639496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_41638896_41639388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017569	chr4	+	123	1	Genic_Genomic	ENSMUSG00000084761.2	novel	NA	NA	NA	NA	-6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTACCTTTCCCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	41639371	41639494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_41639400_41639500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017570	chr4	-	857	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	41713535	41712032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41712815_41713460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017571	chr4	-	852	2	NNC	ENSMUSG00000036114.4	novel	856	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	41713533	41712032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_41712815_41713463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017572	chr4	-	784	1	NIC	ENSMUSG00000036114.4	novel	856	2	NA	NA	718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	41712816	41712032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_41712000_41712800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017573	chr4	-	973	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAGTGGGGCATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	41723170	41714797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017574	chr4	-	467	6	FSM	ENSMUSG00000028447.12	ENST00000378916.8	492	6	29	-4	29	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCAGGGGAAGGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	41723103	41715152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41719836_41719924_41720782_41720868_41723034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017575	chr4	-	985	1	Genic_Genomic	ENSMUSG00000036078.17	novel	NA	NA	NA	NA	1883	1	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTCCTTATGTGTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	41739476	41738491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_41738500_41739500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017576	chr4	-	1500	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	7	133	7	-133	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTCCAAGGAGCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	41741352	41738625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017577	chr4	-	957	3	NNC	ENSMUSG00000036078.17	novel	1640	4	NA	NA	387	-425	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCCTTCGGAGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	41740972	41738917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_41739581_41740549_41740643_41740771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017578	chr4	+	489	5	NNC	ENSMUSG00000036073.18	novel	771	7	NA	NA	1402	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTAGTGGAAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	41756964	41764878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_41757000_41757155_41757279_41763581_41763682_41763824_41763886_41764708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017579	chr4	+	1259	2	ISM	ENSMUSG00000036052.15	ENSMUST00000107973.3	2300	3	3813	368	3813	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGGCAGCTGTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	42956906	42958355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_42957128_42957317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017580	chr4	-	718	1	NIC	ENSMUSG00000028452.8	novel	3231	17	NA	NA	19363	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATCCTACTGACATACT	NA	NA	NA	NA	NA	NA	NA	NA	42980639	42979921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_42979900_42980600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017581	chr4	-	1297	4	NNC	ENSMUSG00000028452.8	novel	3231	17	NA	NA	16882	-11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGAAACTTGCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	42983120	42979932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_42980635_42980793_42980949_42982530_42982687_42982836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017582	chr4	-	901	3	NNC	ENSMUSG00000028452.8	novel	2893	16	NA	NA	16878	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCAAAATGGAGCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	42983124	42979975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_42980510_42982607_42982687_42982836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017583	chr4	-	1053	4	NNC	ENSMUSG00000028452.8	novel	3396	16	NA	NA	16424	-560	intron_retention	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGGCAGTGTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	42983578	42980579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_42980949_42982530_42982687_42982836_42983150_42983363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017584	chr4	-	388	2	NNC	ENSMUSG00000028452.8	novel	3396	16	NA	NA	17351	-655	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTCTTTCCTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	42982651	42980674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_42980942_42982530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017585	chr4	-	798	4	NNC	ENSMUSG00000028452.8	novel	3396	16	NA	NA	15584	-2510	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCAGTACTCTTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	42984418	42982529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_42982687_42982836_42983150_42983363_42983577_42984303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017586	chr4	-	1052	6	ISM	ENSMUSG00000028452.8	ENST00000417448.2	3305	17	13939	2824	13939	-2824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAGGTGCAGAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	42986063	42982843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017587	chr4	-	802	5	ISM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	17	13272	17	-13215	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTAGAGACAGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	43000490	42993234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017588	chr4	-	888	4	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	5223	0	5223	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAATGTGAATGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	43019854	43017653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017589	chr4	-	643	4	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	3348	1558	3348	-1558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGCAGGGGAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	43021729	43019211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43019436_43019646_43019854_43020266_43020319_43021569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017590	chr4	-	669	4	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	2881	1993	2881	-1993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTCTGTGCTTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43022196	43019646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43019854_43020266_43020319_43021569_43021795_43022011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017591	chr4	-	730	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	1274	4010	1274	-4010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGCGCTGAGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	43023803	43021663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017592	chr4	-	1046	5	ISM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	0	4438	0	-4438	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTGGCAGTGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	43025077	43022091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017593	chr4	-	641	2	NNC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	22	-6018	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAGAAGCGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	43025055	43023671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_43023816_43024558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017594	chr4	-	300	1	Genic_Genomic	ENSMUSG00000028455.16	novel	NA	NA	NA	NA	3469	2	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGATGGCTGTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	43027987	43027687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_43027700_43028000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017595	chr4	-	452	3	ISM	ENSMUSG00000028455.16	ENST00000452248.6	1196	9	2096	74	2096	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTAATAAAGTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	43029360	43028052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43028294_43028937_43029067_43029278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017596	chr4	-	308	3	ISM	ENSMUSG00000028455.16	ENST00000452248.6	1196	9	1850	974	1850	-974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGGTGGCTCAGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	43029606	43028952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43029067_43029278_43029359_43029492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017597	chr4	-	361	3	ISM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	1805	1589	1551	-1300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGGCTGATGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	43029905	43029278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43029359_43029492_43029638_43029769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017598	chr4	-	251	2	NNC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	1551	-1540	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTGAACAGATAAATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	43029905	43029518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_43029634_43029769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017599	chr4	-	329	3	ISM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	1558	1858	1304	-1569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGATTCTGGCCTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	43030152	43029547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43029638_43029769_43029905_43030048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017600	chr4	-	270	3	ISM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	1443	2075	1189	-1786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGATTGGGTTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	43030267	43029764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43029905_43030048_43030151_43030239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017601	chr4	-	404	4	ISM	ENSMUSG00000028455.16	ENST00000452248.6	1196	9	344	2069	344	-2069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCGGATCTGGGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	43031112	43030047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43030151_43030239_43030299_43030435_43030536_43030970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017602	chr4	-	542	3	ISM	ENSMUSG00000028455.16	ENST00000452248.6	1196	9	-177	2458	77	-2458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGAGCGATGGGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	43031633	43030436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43030536_43030970_43031109_43031328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017603	chr4	+	453	4	ISM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	-8	496	-8	-496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACAGTGAGAATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	43493380	43495425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017604	chr4	+	620	5	ISM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	268	0	241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	43493629	43495921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017605	chr4	-	605	3	ISM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	2390	282	2390	-282	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCCATTTTGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	43497305	43496423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43496721_43496820_43496910_43497086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017606	chr4	-	342	1	ISM	ENSMUSG00000028464.17	ENSMUST00000030184.12	2175	9	8412	0	8336	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	43515052	43514710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43514700_43515100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017607	chr4	-	636	7	ISM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	3894	4	3687	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGCCAGGGCCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	43519701	43514714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017608	chr4	-	342	2	ISM	ENSMUSG00000028464.17	ENSMUST00000107913.10	2098	9	5087	1022	5087	-1019	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGACCTCCACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43518301	43515733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43516004_43518229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017609	chr4	-	711	4	ISM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	24	4676	24	-4672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTCTTGTCCCACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	43523571	43519386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43519507_43519610_43519745_43522674_43522801_43523240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017610	chr4	-	641	1	NIC	ENSMUSG00000028467.16	novel	3544	17	NA	NA	977	2	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTAGTGTGGTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	43567570	43566929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_43566900_43567600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017611	chr4	-	1140	2	FSM	ENSMUSG00000028467.16	ENST00000378088.1	1533	2	-1	394	-1	-394	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCATGCAGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	43568548	43567325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_43567917_43567999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017612	chr4	+	2660	1	ISM	ENSMUSG00000028468.16	ENSMUST00000107886.9	5888	9	6113	0	5870	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGTGTCTAATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	43584827	43587487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_43584800_43587500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017613	chr4	+	267	2	ISM	ENSMUSG00000028469.16	ENSMUST00000107874.9	3480	21	14967	3673	14967	-3673	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAACGCAAAGCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	43647151	43647571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_43647318_43647470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017614	chr4	-	473	3	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	1101	-3	1101	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGTGAGTAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	43652022	43651321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43651655_43651746_43651792_43651927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017615	chr4	-	704	3	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	0	792	0	-441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGCCTGGGAAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	43653123	43652116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43652163_43652344_43652520_43652640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017616	chr4	-	499	2	ISM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	172	1007	172	-656	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGGGGGACCAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	43652951	43652331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_43652520_43652640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017617	chr4	-	612	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATCCCTGTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	43656466	43654226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017618	chr4	+	186	1	FSM	ENSMUSG00000043770.11	ENSMUST00000102482.5	297	1	204	-93	204	93	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGATGAAGGGGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	43664246	43664432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_43664200_43664400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017619	chr4	+	1233	1	FSM	ENSMUSG00000071001.5	ENSMUST00000095109.5	1452	1	219	0	219	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATGAAGGGGAAGGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	43727406	43728639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_43727400_43728600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017620	chr4	+	540	2	FSM	ENSMUSG00000028475.10	ENST00000636776.1	535	2	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCACGGAATAGATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	43730661	43732086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_43730736_43731620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017621	chr4	-	531	2	Antisense	novelGene_ENSMUSG00000028475.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGAAGGGGCAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	43732084	43730667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_-_43730753_43731638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017622	chr4	-	519	2	Antisense	novelGene_ENSMUSG00000028475.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCGACATGGAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	43732084	43730674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_-_43730748_43731638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017623	chr4	+	506	2	NNC	ENSMUSG00000028475.10	novel	535	2	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCACGGAATAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	43730678	43732084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_43730721_43731620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017624	chr4	+	468	1	ISM	ENSMUSG00000028475.10	ENSMUST00000131248.2	4086	2	1584	2449	918	1	mono-exon	FALSE	NA	NA	NA	NA	NA	444	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCACGGAATAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	43731617	43732085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_43731600_43732100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017625	chr4	+	2321	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCTCTAATGCGATTC	NA	NA	NA	NA	NA	NA	NA	NA	43957400	43979119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017626	chr4	+	1817	3	FSM	ENSMUSG00000028480.15	ENSMUST00000107855.2	1816	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	NA	NA	NA	NA	NA	NA	NA	NA	43957690	43979118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_43957774_43970499_43970578_43977462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017627	chr4	+	719	2	ISM	ENSMUSG00000028478.19	ENSMUST00000107846.10	1710	6	1	20114	1	-19850	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCGGATCGGTCGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	44004452	44012732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44004701_44012261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017628	chr4	+	1206	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	-122	-5	-117	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCATCTTTAATTGATC	NA	NA	NA	NA	NA	NA	NA	NA	44012520	44032850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017629	chr4	+	1105	4	NNC	ENSMUSG00000028478.19	novel	1079	5	NA	NA	-30	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCATCTTTAATTGATC	NA	NA	NA	NA	NA	NA	NA	NA	44012607	44032850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_44013009_44019849_44019992_44025448_44025561_44032400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017630	chr4	+	926	3	FSM	ENSMUSG00000028478.19	ENST00000540080.5	918	3	-3	-5	-3	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTTTAATTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	44012646	44032852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_44013009_44025448_44025561_44032400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017631	chr4	+	906	3	NNC	ENSMUSG00000028478.19	novel	918	3	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGCATCTTTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	44012657	44032848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_44013009_44025448_44025561_44032405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017632	chr4	+	933	4	NNC	ENSMUSG00000028478.19	novel	1079	5	NA	NA	8	40418	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGGTTAATTCAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44012657	44073265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_44013009_44025448_44025561_44032400_44032844_44073238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017633	chr4	+	905	3	NNC	ENSMUSG00000028478.19	novel	918	3	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGCATCTTTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	44012662	44032848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_44013009_44025448_44025565_44032405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017634	chr4	+	679	5	FSM	ENSMUSG00000028478.19	ENST00000466396.5	676	5	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAAACACTACGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	44012713	44032582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_44013009_44025448_44025561_44030214_44030269_44031399_44031436_44032400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017635	chr4	+	453	1	Genic_Genomic	ENSMUSG00000028478.19	novel	NA	NA	NA	NA	19681	3	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCATCTTTAATTGATC	NA	NA	NA	NA	NA	NA	NA	NA	44032397	44032850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_44032400_44032800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017636	chr4	-	354	2	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	21188	-1	21188	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTCGGGAGCTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	44039040	44037093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_44037354_44038946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017637	chr4	-	263	1	NIC	ENSMUSG00000028479.19	novel	5384	12	NA	NA	22872	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTCGGGAGCTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	44037356	44037093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_44037100_44037400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017638	chr4	-	346	2	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	18379	3183	18379	-3183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGCAAAGAAACTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44041849	44040277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_44040437_44041662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017639	chr4	-	324	2	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	17934	4598	17934	-4598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTCGTGACGCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	44042294	44041692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_44041885_44042162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017640	chr4	-	294	2	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	15307	5067	15307	-5067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACTTTAAACTACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	44044921	44042161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_44042293_44044758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017641	chr4	-	301	2	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	14237	7663	14237	-7663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTCACTGCACGACACT	NA	NA	NA	NA	NA	NA	NA	NA	44045991	44044757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_44044970_44045902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017642	chr4	-	509	3	ISM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	231	8822	231	-8822	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTACCCTTGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44059997	44045916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_44045991_44052770_44052984_44059775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017643	chr4	+	301	4	ISM	ENSMUSG00000035683.14	ENST00000536987.5	1998	14	11090	31265	11090	-31265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAATGCAGCATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	44318076	44332966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44318123_44324199_44324269_44325640_44325740_44332879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017644	chr4	+	315	3	ISM	ENSMUSG00000035683.14	ENST00000536987.5	1998	14	18652	23479	18652	-23479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAAGCCCTGTGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	44325638	44340752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44325740_44332879_44332967_44340625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017645	chr4	+	327	3	ISM	ENSMUSG00000035683.14	ENST00000536987.5	1998	14	25893	19206	25893	-19206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAGTTTTATTACTACTT	NA	NA	NA	NA	NA	NA	NA	NA	44332879	44345025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44332967_44340625_44340753_44344912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017646	chr4	+	443	3	ISM	ENSMUSG00000035683.14	ENST00000536987.5	1998	14	33666	16876	33666	-16876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTGCTAGGAAATAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44340652	44347355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44340753_44344912_44345024_44347123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017647	chr4	+	500	3	ISM	ENSMUSG00000035683.14	ENST00000536987.5	1998	14	40135	13121	40135	-13121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGGGCCAGAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	44347121	44351110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44347356_44349843_44349941_44350941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017648	chr4	+	367	3	ISM	ENSMUSG00000035683.14	ENST00000536987.5	1998	14	42860	3256	42860	-3256	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAAGCTCGCCGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	44349846	44360975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44349941_44350941_44351111_44360871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017649	chr4	+	797	3	ISM	ENSMUSG00000035683.14	ENST00000536987.5	1998	14	43954	-1	43954	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCTCTTTTTTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	44350940	44364232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44351111_44360871_44360976_44363709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017650	chr4	+	311	1	ISM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	63050	439	56939	4	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTTTGTATCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	44363925	44364236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44363900_44364200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017651	chr4	-	242	3	ISM	ENSMUSG00000014030.16	ENST00000522003.5	1014	9	140302	31	140302	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCACCGCCTATGACCG	NA	NA	NA	NA	NA	NA	NA	NA	44570106	44531532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_44531583_44537419_44537507_44570001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017652	chr4	-	670	5	NNC	ENSMUSG00000014030.16	novel	745	6	NA	NA	18397	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATACCTAGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44692011	44609713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_44609845_44645547_44645716_44679439_44679569_44682668_44682734_44691834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017653	chr4	-	701	5	ISM	ENSMUSG00000014030.16	ENST00000523145.5	745	6	18374	0	18374	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATACCTAGATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44692034	44609713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_44609845_44645547_44645724_44679439_44679569_44682668_44682734_44691834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017654	chr4	+	858	2	FSM	ENSMUSG00000035649.18	ENST00000322831.6	858	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCGTATTGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	44756673	44762475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_44756831_44761774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017655	chr4	+	701	1	NIC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	5101	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCGTATTGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	44761774	44762475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_44761800_44762500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017656	chr4	+	603	2	ISM	ENSMUSG00000035649.18	ENSMUST00000147272.8	4251	3	6067	628	6067	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCAGGTCTGTGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	44929184	44931587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44929236_44931035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017657	chr4	+	595	1	ISM	ENSMUSG00000035649.18	ENSMUST00000107824.9	2503	9	175041	0	8491	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTAAATAAATGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44931608	44932203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_44931600_44932200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017658	chr4	+	1489	2	ISM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	12780	399	12700	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCTTGCCTCAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	45031362	45033293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_45031499_45031940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017659	chr4	+	1414	1	Genic_Genomic	ENSMUSG00000028318.15	novel	NA	NA	NA	NA	13618	2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCTGACGACAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	45032280	45033694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_45032300_45033700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017660	chr4	-	442	1	Genic_Genomic	ENSMUSG00000078713.9	novel	NA	NA	NA	NA	2392	3	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTGTTTTTAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	45105646	45105204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_45105200_45105600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017661	chr4	-	667	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107808.3	679	3	15	-3	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTTTTGTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	45108093	45105208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_45105645_45106838_45106889_45107912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017662	chr4	-	635	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	-1	5	-1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGCGTGGTTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	45108115	45105212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_45105645_45107912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017663	chr4	-	699	2	FSM	ENSMUSG00000078713.9	ENST00000401811.3	698	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATATTTTTAATAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	45108109	45105241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_45105645_45107813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017664	chr4	+	574	2	ISM	ENSMUSG00000035601.10	ENSMUST00000107800.3	983	8	13876	-346	13876	346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCCGATTTCCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	45314309	45315488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_45314407_45315011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017665	chr4	+	510	1	Genic_Genomic	ENSMUSG00000035601.10	novel	NA	NA	NA	NA	15201	13	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGAATATATATAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	45315634	45316144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_45315600_45316100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017666	chr4	-	421	1	NIC	ENSMUSG00000028322.12	novel	1077	4	NA	NA	3484	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTAGTTCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	45317033	45316612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_45316600_45317000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017667	chr4	-	581	3	ISM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	929	138	817	72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGCAGATCTTTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	45319700	45316750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_45317029_45317677_45317830_45319549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017668	chr4	-	692	3	FSM	ENSMUSG00000028322.12	ENST00000396521.3	603	3	-83	-6	29	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAATGGATATTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	45320600	45316816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_45317029_45319549_45319700_45320270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017669	chr4	-	353	2	NNC	ENSMUSG00000028322.12	novel	603	3	NA	NA	817	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTAATGGATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45319700	45316818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_45317021_45319549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017670	chr4	-	383	3	ISM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	252	1091	140	-881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACGTTGGGCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	45320377	45317703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_45317830_45319549_45319700_45320270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017671	chr4	+	1738	2	ISM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	30829	4253	30829	-4253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTACCCTGAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	45372929	45375506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_45373070_45373908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017672	chr4	-	1228	1	FSM	ENSMUSG00002074999.1	ENSMUST00020182372.1	125	1	-32	-1071	-32	1071	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGGTTGCTCTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45397150	45395922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_45395900_45397200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017673	chr4	-	1264	2	ISM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	3925	3103	3924	215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCAGCCTGCACCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	45404836	45399025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_45400180_45404726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017674	chr4	-	977	5	FSM	ENSMUSG00000035551.7	ENSMUST00000044297.7	2864	5	148	1739	4	-891	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGGGATGGTCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	45826775	45811206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_45811381_45813392_45813551_45815471_45815589_45816277_45816388_45826357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017675	chr4	-	225	1	ISM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	23505	0	23468	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46114970	46114745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46114700_46115000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017676	chr4	+	172	1	ISM	ENSMUSG00000028328.14	ENSMUST00000107773.3	3158	10	76926	0	76926	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGCTCTGTGTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	46115860	46116032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_46115900_46116000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017677	chr4	-	262	2	ISM	ENSMUSG00000035495.16	ENSMUST00000107770.2	2700	10	17884	4113	17884	-4113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTGAGCCACTGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	46120554	46119844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46120000_46120447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017678	chr4	-	873	4	ISM	ENSMUSG00000028329.14	ENSMUST00000058232.11	1241	6	10612	0	10612	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGTAACAAGAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	46185699	46155346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46155827_46183117_46183236_46184287_46184454_46185590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017679	chr4	-	481	3	ISM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	11855	0	11855	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATGCAGTCTTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	46184456	46175221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46175416_46183117_46183236_46184287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017680	chr4	-	473	3	ISM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	4	10369	4	-10369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGCCTTAAACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	46196307	46185590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46185697_46193049_46193158_46196048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017681	chr4	+	250	1	FSM	ENSMUSG00000080816.2	ENSMUST00000119110.2	470	1	359	-139	359	139	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTGCTGCCATGACAG	NA	NA	NA	NA	NA	NA	NA	NA	46327654	46327904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_46327700_46327900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017682	chr4	-	481	3	FSM	ENSMUSG00000028331.13	ENST00000611338.4	471	3	-6	-4	-6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTCTTTGTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	46389416	46386089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_46386252_46387522_46387743_46389317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017683	chr4	-	443	3	NNC	ENSMUSG00000028331.13	novel	471	3	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACTCTCTCTCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	46389380	46386093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_46386252_46387520_46387743_46389317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017684	chr4	+	1714	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	46450903	46472657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017685	chr4	+	1723	4	ISM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	9793	-1	9793	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTTTGATGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	46499040	46503633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_46499143_46500065_46500221_46500712_46500980_46502434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017686	chr4	-	344	2	ISM	ENSMUSG00000039813.15	ENST00000375066.6	2686	13	43466	0	43466	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATAGAGTTCAGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	46606475	46605717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46605969_46606382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017687	chr4	-	396	3	ISM	ENSMUSG00000039813.15	ENST00000375066.6	2686	13	33601	8580	33601	-8580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTACGGGACCGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	46616340	46614297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46614425_46615026_46615209_46616253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017688	chr4	-	400	2	ISM	ENSMUSG00000039813.15	ENST00000375066.6	2686	13	29187	10555	29187	-10555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCCCTGCTGACCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	46620754	46616272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46616365_46620446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017689	chr4	-	402	3	ISM	ENSMUSG00000039813.15	ENST00000375066.6	2686	13	12283	22622	12283	4240	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCCAGCCCGTTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	46637658	46628339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_46628538_46629875_46630010_46637588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017690	chr4	-	751	1	ISM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	3750	0	3750	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	47470583	47469832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_47469800_47470600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017691	chr4	-	826	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	288	1907	288	-1907	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCACGGGGTTCCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	47474045	47471739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_47472459_47473938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017692	chr4	+	515	4	NNC	ENSMUSG00000053317.12	novel	564	4	NA	NA	-6	-53	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCAGTTTTTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	47474651	47483189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_47474754_47474911_47475010_47480130_47480231_47482974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017693	chr4	+	495	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	69	0	69	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCCTGTGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	47474726	47483242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017694	chr4	+	270	1	Genic_Genomic	ENSMUSG00000053317.12	novel	NA	NA	NA	NA	8316	1	mono-exon	FALSE	NA	NA	NA	NA	NA	587	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGCCTGTGCTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	47482973	47483243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_47483000_47483200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017695	chr4	+	447	3	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	82278	33332	82278	-33332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTACGGAGGCACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	48389957	48396389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48390140_48392583_48392694_48396234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017696	chr4	+	544	3	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	90368	21919	90368	-21919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCAAGTAAGTGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	48398047	48407802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48398280_48402832_48402940_48407597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017697	chr4	+	488	2	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	99916	13543	99916	-13543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTCCAGAAAGCCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	48407595	48416178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48407811_48415905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017698	chr4	+	408	2	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	108222	8164	108222	-8164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGACCAATGGCAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	48415901	48421557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48416199_48421446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017699	chr4	+	424	3	ISM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	118313	0	118313	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAACCAGTGTGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	48425992	48429721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48426225_48427033_48427109_48429604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017700	chr4	-	385	2	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	36803	0	36803	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCTTCCTTCATACAG	NA	NA	NA	NA	NA	NA	NA	NA	48433263	48430854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48431084_48433107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017701	chr4	-	231	1	NIC	ENSMUSG00000028345.16	novel	2848	14	NA	NA	38981	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCTTCCTTCATACAG	NA	NA	NA	NA	NA	NA	NA	NA	48431085	48430854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_48430900_48431100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017702	chr4	-	337	2	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	34982	2253	34982	-2152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTATTGTGGAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	48435084	48433107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48433262_48434901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017703	chr4	-	403	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	18003	4045	18003	-3944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTTACTTTATTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	48452063	48434899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48435084_48436436_48436518_48451925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017704	chr4	-	309	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	17082	5580	17082	-5479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCCTTAGTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	48452984	48436434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48436518_48451925_48452060_48452892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017705	chr4	-	404	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	13153	21070	13153	-20969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAGCACACCTAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	48456913	48451924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48452060_48452892_48452982_48456733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017706	chr4	-	493	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	10677	25879	10677	-25778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCACTGTGAAATGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	48459389	48456733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48456912_48458537_48458714_48459250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017707	chr4	-	451	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	9972	27775	9972	-27674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGCTGATTGATATTA	NA	NA	NA	NA	NA	NA	NA	NA	48460094	48458629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48458714_48459250_48459387_48459863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017708	chr4	-	594	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	2161	29009	2161	-28908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGGTGCAGGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	48467905	48459863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48460103_48462768_48462882_48467663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017709	chr4	-	1147	3	ISM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	-9	36808	-9	-36707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTAGTGGATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	48470075	48467662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_48467905_48468280_48468994_48469883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017710	chr4	+	1642	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	-39	-6	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTATGTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	48540459	48561925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_48540569_48552379_48552831_48560843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017711	chr4	+	514	2	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	9	-8194	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCGAATACCACCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	48540468	48552798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_48540569_48552384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017712	chr4	+	556	3	ISM	ENSMUSG00000039693.12	ENST00000374885.5	768	4	66	5112	27	-5112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTTTGAACACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	48540525	48555880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48540569_48552379_48552831_48555818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017713	chr4	+	1514	2	ISM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	11871	23	11871	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAAAATGTCTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	48552369	48561896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48552831_48560843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017714	chr4	+	669	3	ISM	ENSMUSG00000039693.12	ENST00000374885.5	768	4	11913	-3	11874	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGCTTTAAAGAAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	48552372	48560995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48552831_48555818_48555878_48560843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017715	chr4	+	661	3	NNC	ENSMUSG00000039693.12	novel	768	4	NA	NA	11876	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTGCTTTAAAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	48552374	48560992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_48552831_48555821_48555878_48560843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017716	chr4	+	743	1	ISM	ENSMUSG00000039693.12	ENSMUST00000061135.8	1589	3	21241	0	20677	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	48561175	48561918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_48561200_48561900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017717	chr4	+	1918	2	FSM	ENSMUSG00000028348.8	ENSMUST00000030033.5	2054	2	0	136	0	-136	multi-exon	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCACTGGCTCCCCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	48663513	48673366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_48664030_48671964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017718	chr4	+	1444	1	Genic_Genomic	ENSMUSG00000028348.8	novel	NA	NA	NA	NA	8546	1	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCATGGGTGCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	48672059	48673503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_48672100_48673500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017719	chr4	-	106	1	ISM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	8392	0	8392	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTTAAAGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	49512701	49512595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_49512600_49512700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017720	chr4	-	108	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	84	1922	84	-1922	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGTCCACCCTTACGAA	NA	NA	NA	NA	NA	NA	NA	NA	49521009	49514517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_49514578_49520961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017721	chr4	+	1325	1	Genic_Genomic	ENSMUSG00000039634.13	novel	NA	NA	NA	NA	8990	14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTAAAATGTATGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	49530206	49531531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_49530200_49531500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017722	chr4	+	799	2	ISM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	23420	315	23420	-314	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAGTTTTTTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	49655485	49656572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_49655513_49655800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017723	chr4	+	767	1	ISM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	24055	0	24055	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTTGTGGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	49656120	49656887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_49656100_49656900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017724	chr4	+	313	2	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	976	45900	976	-45900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATTTGAAGCTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	52440218	52442360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52440424_52442252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017725	chr4	+	270	3	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	6712	38829	6712	-38829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAATTCAAAAAACATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	52445954	52449431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52446075_52447712_52447752_52449320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017726	chr4	+	502	3	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	11575	30883	11575	-30883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAATGCTGTTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	52450817	52457377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52451054_52451227_52451378_52457261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017727	chr4	+	390	2	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	18017	29692	18017	-29692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGGTTTGTCTTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	52457259	52458568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52457496_52458414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017728	chr4	+	261	2	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	20915	27089	20915	-27089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTATTTTGTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	52460157	52461171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52460297_52461049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017729	chr4	+	463	3	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	26691	18286	26691	-18286	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAGCAATCTTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52465933	52469974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52466069_52467789_52467915_52469771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017730	chr4	+	343	2	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	31521	13143	31521	-13143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTATGTTGAGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	52470763	52475117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52470910_52474920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017731	chr4	+	318	2	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	35683	11489	35683	-11489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGTAAAAGAGAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	52474925	52476771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52475116_52476643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017732	chr4	+	311	2	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	42425	4073	42425	-4073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGACCTCTCCAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	52481667	52484187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52481831_52484039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017733	chr4	+	344	2	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	44821	1544	44821	-1544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGGATCCAAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	52484063	52486716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52484188_52486496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017734	chr4	+	291	1	ISM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	48727	0	48727	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	52487969	52488260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52488000_52488300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017735	chr4	+	1576	1	ISM	ENSMUSG00000028314.7	ENSMUST00000029995.6	2668	2	14581	0	3649	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTCTGCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	52610854	52612430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_52610900_52612400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017736	chr4	+	1383	5	ISM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	3136	0	3066	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53015015	53022060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017737	chr4	+	450	2	ISM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	122472	2051	27531	-2051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAACCTAGATAAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	53563142	53565767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_53563222_53565396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017738	chr4	+	370	1	FSM	ENSMUSG00000081516.2	ENSMUST00000117239.2	1049	1	550	129	550	-129	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCCAATAATCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	53662845	53663215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_53662800_53663200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017739	chr4	+	616	1	ISM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	51172	0	45121	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTGTTTGTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	53765169	53765785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_53765200_53765800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017740	chr4	+	2689	5	ISM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	14579	0	14579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	53840623	53862019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017741	chr4	+	1858	2	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	35364	691	35364	-691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTATTATTCTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55385406	55391546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_55385602_55389883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017742	chr4	+	1726	1	ISM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	40469	0	40469	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCATTTCTCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55390511	55392237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_55390500_55392200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017743	chr4	-	1453	3	ISM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	1730	608	1730	-608	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGTGAGCTTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55530736	55527750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_55528301_55529717_55529883_55529998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017744	chr4	+	209	1	ISM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	7044	0	7044	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	NA	NA	NA	NA	NA	NA	NA	NA	56809392	56809601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_56809400_56809600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017745	chr4	-	342	1	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	53912	0	53878	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	56811276	56810934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_56810900_56811300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017746	chr4	-	389	3	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	29868	18549	29834	11262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAATAGATTTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	56835320	56829483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_56829643_56832905_56832993_56835177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017747	chr4	-	360	2	ISM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	27297	24244	27263	5567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGAGCTGTGCTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	56837891	56835178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_56835379_56837731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017748	chr4	-	386	2	ISM	ENSMUSG00000038816.15	ENSMUST00000107612.3	850	5	17147	3701	17147	-3701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTCACTTGTGGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	56848007	56844446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_56844635_56847809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017749	chr4	-	726	3	ISM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	58716	0	58704	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGGATGACCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	56888707	56879934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_56880293_56886017_56886213_56888534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017750	chr4	-	561	2	ISM	ENSMUSG00000055296.15	ENSMUST00000107609.4	2643	18	97	57642	97	-57642	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATGATACTGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	56947314	56937888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_56937980_56946844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017751	chr4	+	1320	2	Antisense	novelGene_ENSMUSG00000095042.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTTGTTATATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57360256	57372023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_+_57360287_57370733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017752	chr4	-	1306	1	FSM	ENSMUSG00000095042.2	ENSMUST00000119266.2	1002	1	-77	-227	-77	227	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGATGGCCATTTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	57372031	57370725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_57370700_57372000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017753	chr4	+	4345	3	FSM	ENSMUSG00000038729.25	ENSMUST00000098064.9	7172	3	787	2040	787	-2040	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACACGCTATCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	57854945	57894942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_57857038_57883023_57883203_57892868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017754	chr4	+	825	1	ISM	ENSMUSG00000089945.14	ENSMUST00000150412.4	5163	9	256071	0	256071	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGAAGGGGAGGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	57893893	57894718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_57893900_57894700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017755	chr4	+	350	1	ISM	ENSMUSG00000038729.25	ENSMUST00000107600.8	7231	5	154538	0	42474	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	57896632	57896982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_57896600_57897000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017756	chr4	-	1057	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	-3	-3	-3	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAGTGTGACTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	57956414	57943369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017757	chr4	+	419	3	ISM	ENSMUSG00000057280.16	ENST00000416899.7	2801	13	83	77031	83	-77031	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTAGGGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	58286047	58296756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_58286191_58293491_58293619_58296607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017758	chr4	+	324	3	ISM	ENSMUSG00000057280.16	ENST00000416899.7	2801	13	10711	69831	10711	-69831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCAAACTGGTGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58296675	58303956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_58296760_58301601_58301730_58303844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017759	chr4	+	346	2	ISM	ENSMUSG00000057280.16	ENST00000416899.7	2801	13	58187	19662	58187	-19662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTGAGGCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58344151	58354125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_58344316_58353943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017760	chr4	+	313	2	ISM	ENSMUSG00000057280.16	ENST00000416899.7	2801	13	67977	18060	67977	-18060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAATGGAAGGAAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	58353941	58355727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_58354208_58355680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017761	chr4	+	340	2	ISM	ENSMUSG00000057280.16	ENST00000416899.7	2801	13	80831	6252	80831	-6252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATGTCCGAGACATCGG	NA	NA	NA	NA	NA	NA	NA	NA	58366795	58367535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_58366997_58367396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017762	chr4	+	1277	3	ISM	ENSMUSG00000057280.16	ENSMUST00000177951.8	3352	15	81600	171	81597	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTGAAAACTAAAGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	58367561	58374131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_58367589_58368872_58369022_58373030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017763	chr4	+	1124	1	ISM	ENSMUSG00000057280.16	ENSMUST00000102893.10	3323	14	87218	0	87215	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGTGCTGACTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	58373179	58374303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_58373200_58374300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017764	chr4	-	3512	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGGTTCTGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	58553356	58435253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017765	chr4	-	2366	1	ISM	ENSMUSG00000038668.15	ENSMUST00000107570.2	3244	3	61783	0	61783	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58437620	58435254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_58435300_58437600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017766	chr4	-	3470	4	NNC	ENSMUSG00000038668.15	novel	3543	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553311	58435254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_58437635_58486476_58487225_58504621_58504782_58553129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017767	chr4	-	3501	4	NNC	ENSMUSG00000038668.15	novel	3512	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553350	58435254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_58437635_58486476_58487225_58504621_58504774_58553129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017768	chr4	-	663	1	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	113169	7	112347	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATTCATAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58799580	58798917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_58798900_58799600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017769	chr4	-	682	2	ISM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	110942	803	110120	-794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTACTCTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	58801807	58799713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_58800321_58801732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017770	chr4	-	1977	6	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	8957	-1	8957	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTGTGCCTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	58978162	58965437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017771	chr4	-	1328	1	NIC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	20353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGCTGTGCCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58966766	58965438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_58965400_58966800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017772	chr4	-	1411	3	NNC	ENSMUSG00000028378.7	novel	2296	10	NA	NA	16020	-136	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCAAGACAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58971099	58965574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_58966764_58968758_58968872_58970990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017773	chr4	+	1307	3	FSM	ENSMUSG00000092345.2	ENSMUST00000174664.2	1294	3	5	-18	5	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTTTGGTGTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	59003214	59041906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_59003558_59039226_59039359_59041074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017774	chr4	+	3291	2	ISM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	16898	182	16898	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCGTTTTAGAGACACC	NA	NA	NA	NA	NA	NA	NA	NA	59020069	59025391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_59020530_59022560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017775	chr4	+	2863	1	Genic_Genomic	ENSMUSG00000070972.14	novel	NA	NA	NA	NA	19540	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTAGTCCTTTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	59022711	59025574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_59022700_59025600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017776	chr4	+	1174	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	2	16	2	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCATGACAGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	59035089	59041887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_59035319_59039226_59039359_59041074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017777	chr4	+	878	2	NNC	ENSMUSG00000038607.13	novel	1192	3	NA	NA	4217	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTGTTTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	59039304	59041903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_59039359_59041079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017778	chr4	+	835	1	Genic_Genomic	ENSMUSG00000038607.13_ENSMUSG00000092345.2	novel	NA	NA	NA	NA	5982	1	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTGTGTTTGGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	59041069	59041904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_59041100_59041900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017779	chr4	+	1707	2	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	30233	1093	30233	-1093	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCAGCCCGTGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	59219489	59221740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_59219679_59220222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017780	chr4	+	1579	1	ISM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	31998	0	31998	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGTAATGGACTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59221254	59222833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_59221300_59222800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017781	chr4	+	559	3	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	19809	7806	19809	-7806	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTCCCATTATATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	59601453	59610882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_59601568_59606471_59606544_59610509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017782	chr4	+	920	3	ISM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	28864	630	28864	-630	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACAAAACTTCTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	59610508	59618058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_59610876_59612681_59612811_59617634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017783	chr4	+	488	1	Genic_Genomic	ENSMUSG00000028383.18	novel	NA	NA	NA	NA	36558	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGCCTTTTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	59618202	59618690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_59618200_59618700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017784	chr4	-	1020	1	ISM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	11551	1659	11493	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTTTGTAAGGATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	59772315	59771295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_59771300_59772300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017785	chr4	+	1695	3	ISM	ENSMUSG00000066152.12	ENSMUST00000107467.3	868	4	1084	-934	1084	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	62210867	62216648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_62210936_62214123_62214314_62215211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017786	chr4	+	792	2	ISM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	27138	2551	2364	-2551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGGACATCTCATCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	62306101	62307455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_62306273_62306834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017787	chr4	+	665	1	ISM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	30378	0	5604	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTCTGTCTACACACT	NA	NA	NA	NA	NA	NA	NA	NA	62309341	62310006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_62309300_62310000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017788	chr4	-	821	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGACGTCCTTAAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	62326880	62312818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017789	chr4	+	1473	2	ISM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	13896	2329	13896	-2329	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCCCTTCTTTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62340929	62342898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_62340959_62341454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017790	chr4	+	1430	1	ISM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	16764	0	16764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACAGCTTAGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	62343797	62345227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_62343800_62345200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017791	chr4	-	460	1	Genic_Genomic	ENSMUSG00000038422.3	novel	NA	NA	NA	NA	2810	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGTTCCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	62417703	62417243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_62417200_62417700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017792	chr4	-	544	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	39	622	39	-622	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCAGCAGCCCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	62420474	62417866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_62418331_62420394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017793	chr4	-	388	1	ISM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	2032	0	2032	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCATACAATGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	62441273	62440885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_62440900_62441300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017794	chr4	-	497	3	ISM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	252	1151	252	-1151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTTCCCAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	62443053	62442036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_62442348_62442554_62442674_62442986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017795	chr4	+	1643	5	FSM	ENSMUSG00000059810.19	ENSMUST00000125369.8	1719	5	63	13	63	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTCTCAGCAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	62617765	62621242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_62618132_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017796	chr4	+	1143	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	-6	-2	-6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGCAGAATTTCATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	63463002	63468989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_63463237_63466821_63466923_63468181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017797	chr4	+	1131	3	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGCAGAATTTCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	63463008	63468988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_63463237_63466826_63466923_63468181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017798	chr4	+	1115	3	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGCAGAATTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	63463008	63468987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_63463237_63466821_63466923_63468201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017799	chr4	+	1112	3	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGCAGAATTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	63463012	63468987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_63463218_63466821_63466923_63468181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017800	chr4	+	1115	3	NNC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGCAGAATTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	63463015	63468987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_63463237_63466834_63466923_63468181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017801	chr4	+	832	2	FSM	ENSMUSG00000039105.7	ENST00000677452.1	821	2	-7	-4	-7	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGCTCTTCACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	63463147	63468924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_63463237_63468181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017802	chr4	+	407	3	FSM	ENSMUSG00000039105.7	ENST00000679150.1	400	3	-2	-5	-2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGCGCCTGCTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	63463152	63468360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_63463237_63466821_63466923_63468138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017803	chr4	+	801	2	NNC	ENSMUSG00000039105.7	novel	821	2	NA	NA	2	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGCTCTTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	63463156	63468922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_63463237_63468201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017804	chr4	+	788	2	NNC	ENSMUSG00000039105.7	novel	821	2	NA	NA	16	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGCTCTTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	63463170	63468922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_63463218_63468181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017805	chr4	-	327	2	Antisense	novelGene_ENSMUSG00000039105.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAAGAAGAGAAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	63468360	63466817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_-_63466918_63468133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017806	chr4	-	311	2	Antisense	novelGene_ENSMUSG00000039105.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTCAAAGAAGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	63468355	63466821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_-_63466918_63468140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017807	chr4	+	785	1	NIC	ENSMUSG00000039105.7	novel	1135	3	NA	NA	4983	2	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGCTCTTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	63468137	63468922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_63468100_63468900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017808	chr4	+	1881	1	ISM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	25693	3	24114	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTTAGTAAGGGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	63502710	63504591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_63502700_63504600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017809	chr4	-	1225	2	ISM	ENSMUSG00000028364.16	ENSMUST00000107371.2	2928	5	2901	2259	2800	-2259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCATCCCTGTCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	63936061	63933164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_63933396_63935067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017810	chr4	-	1449	2	ISM	ENSMUSG00000028364.16	ENSMUST00000107371.2	2928	5	120	4585	19	-4585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATGTGTATCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	63938842	63935490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_63936478_63938380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017811	chr4	+	1777	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	1	1413	1	-1413	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCGACAGAATGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	65523223	65533062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_65523307_65531368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017812	chr4	+	1722	1	ISM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	9531	0	9531	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	65532753	65534475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_65532800_65534500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017813	chr4	+	706	1	FSM	ENSMUSG00000083087.2	ENSMUST00000117071.2	859	1	204	-51	204	51	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATCAGTTGTTATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67849321	67850027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_67849300_67850000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017814	chr4	+	299	1	FSM	ENSMUSG00000082998.4	ENSMUST00000117230.2	597	1	389	-91	389	91	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGGAAACAATTCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	69610603	69610902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_69610600_69610900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017815	chr4	+	1183	3	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	88005	4003	88005	-1628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAATAAGTTGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	74080283	74106537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_74080355_74088874_74089000_74105550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017816	chr4	+	1032	2	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	113828	0	113828	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTACATTTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	74106106	74110540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_74107120_74110521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017817	chr4	+	973	1	ISM	ENSMUSG00000049122.18	ENSMUST00000084474.6	4136	14	174488	1024	113890	-1024	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATATATGGCACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	74106168	74107141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_74106200_74107100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017818	chr4	-	745	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTTTTAATTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	75196542	75195586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_75196007_75196217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017819	chr4	-	509	2	ISM	ENSMUSG00000028399.19	ENST00000463477.5	796	4	106195	0	-6821	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAATTCAGTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	76058940	76058330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_76058650_76058750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017820	chr4	+	196	1	FSM	ENSMUSG00000083496.2	ENSMUST00000121853.2	749	1	618	-65	618	65	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGGAATTGGTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	79246562	79246758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_79246600_79246800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017821	chr4	+	619	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	3	-1001	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCAGGGTATTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	80755825	80768118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_80755941_80763027_80763200_80764807_80764988_80767966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017822	chr4	+	439	3	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	7202	-1062	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTTACTGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80763024	80768057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_80763200_80764814_80764988_80767966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017823	chr4	+	401	3	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	7295	-1003	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTGTCAGGGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80763117	80768116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_80763189_80764807_80764988_80767966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017824	chr4	+	582	4	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	7330	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTGCCCATCCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	80763152	80769123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_80763200_80764807_80764988_80767966_80768114_80768915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017825	chr4	+	506	3	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	9005	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCGCCTGCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	80764827	80769119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_80764988_80767966_80768114_80768920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017826	chr4	+	425	3	NNC	ENSMUSG00000005994.15	novel	817	5	NA	NA	9090	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCGCCTGCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	80764912	80769119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_80764988_80767966_80768118_80768920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017827	chr4	+	206	1	NIC	ENSMUSG00000005994.15	novel	2720	8	NA	NA	13091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCGCCTGCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	80768913	80769119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_80768900_80769100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017828	chr4	+	3069	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	80828881	80873867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_80829883_80871799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017829	chr4	-	930	3	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	174977	5931	174977	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAACCCAGTTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	82248568	82214343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_82215049_82245965_82246151_82248528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017830	chr4	-	835	5	ISM	ENSMUSG00000008575.18	ENSMUST00000107248.8	3294	12	6953	54386	6554	-54327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACCAGCTGCTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	82416991	82268670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017831	chr4	+	833	5	ISM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	-112	5634	1	-5634	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGCACATCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	83335855	83354689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017832	chr4	+	669	6	ISM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	981	3103	974	-3103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTGACATCATTCAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	83336941	83368474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017833	chr4	-	813	1	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	29967	0	29961	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	83374729	83373916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_83373900_83374700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017834	chr4	-	799	2	ISM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	28294	692	28288	-692	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAACAGACTGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	83376402	83374608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_83375317_83376311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017835	chr4	+	461	1	NIC	ENSMUSG00000066113.17	novel	7839	28	NA	NA	145301	41	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGATATGTATCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	86117512	86117973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_86117500_86118000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017836	chr4	-	1196	1	Genic_Genomic	ENSMUSG00000028492.14	novel	NA	NA	NA	NA	42098	12	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACATACTCATTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	86364059	86362863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_86362900_86364100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017837	chr4	-	1365	2	FSM	ENSMUSG00000028492.14	ENST00000380530.1	1360	2	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAATGACACATACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	86406157	86362870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_86364055_86405976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017838	chr4	+	494	1	FSM	ENSMUSG00000070934.7	ENSMUST00000091064.8	1618	1	1124	0	1124	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTGAAATAATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	86495028	86495522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_86495000_86495500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017839	chr4	-	1225	3	ISM	ENSMUSG00000038047.19	ENST00000380502.8	2626	15	22131	-1	19864	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGAGTCAACCAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	86504096	86501118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86502111_86503564_86503701_86503999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017840	chr4	-	119	1	NIC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	10854	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACCTGCAGTAAGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	86513106	86512987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_86513000_86513100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017841	chr4	-	213	2	ISM	ENSMUSG00000038047.19	ENST00000421150.1	824	6	10238	26	10238	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCTCCTTTCAGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	86513722	86513014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86513105_86513599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017842	chr4	-	210	2	ISM	ENSMUSG00000038047.19	ENST00000421150.1	824	6	6351	709	6351	-709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGGCTGGCCAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	86517609	86513697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86513794_86517495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017843	chr4	-	240	3	ISM	ENSMUSG00000038047.19	ENST00000421150.1	824	6	1564	4564	1564	-4564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGTTAATATTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	86522396	86517552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86517667_86518987_86519037_86522319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017844	chr4	-	181	2	ISM	ENSMUSG00000038047.19	ENST00000421150.1	824	6	16	9428	16	-9428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATTAAAACAAAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	86523944	86522416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86522527_86523873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017845	chr4	-	260	1	Genic_Genomic	ENSMUSG00000028494.13	novel	NA	NA	NA	NA	13238	2	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGTTGTTACATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	86575059	86574799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_86574800_86575100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017846	chr4	-	534	3	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	9789	625	9789	-625	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCTGCAGAAAATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	86578508	86575426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86575642_86576817_86576953_86578324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017847	chr4	-	418	3	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	7917	2125	7917	-2125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCCAACCAGAAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	86580380	86576926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86576953_86578324_86578507_86580170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017848	chr4	-	481	3	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	1495	5450	1495	-5450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAGTGGAGTAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	86586802	86580251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86580451_86582665_86582749_86586603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017849	chr4	-	367	3	ISM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	2	11801	2	-11801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTAGATTCTGCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	86588295	86586602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86586800_86586886_86586943_86588181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017850	chr4	-	137	1	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	2616	0	2616	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTCATTAATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	86773033	86772896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86772900_86773000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017851	chr4	-	579	3	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	1053	78	1053	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTACTTCTAAGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	86774596	86772974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86773193_86774103_86774251_86774382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017852	chr4	-	233	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	1426	-170	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACGCTAAACTTTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	86774223	86773066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_86773180_86774103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017853	chr4	-	176	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	1477	-181	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCTGCAGAATACGCTA	NA	NA	NA	NA	NA	NA	NA	NA	86774172	86773077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_86773185_86774103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017854	chr4	-	263	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	1150	-1203	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTTGGGGGGGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	86774499	86774099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_86774246_86774382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017855	chr4	-	315	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	1100	-1203	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTTGGGGGGGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	86774549	86774099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_86774248_86774382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017856	chr4	-	202	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	1189	-1220	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACAAAGAAGGTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	86774460	86774116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_86774251_86774392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017857	chr4	-	210	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	1173	-1230	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAAGCCCTTAAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	86774476	86774126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_86774243_86774382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017858	chr4	-	438	3	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	-8	1491	-8	-1491	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGTGAGGCTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	86775657	86774387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_86774594_86774964_86775097_86775557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017859	chr4	-	184	2	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	558	-1633	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCATGGCAGAGTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	86775091	86774529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_86774594_86774971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017860	chr4	+	156	2	ISM	ENSMUSG00000038368.17	ENSMUST00000159342.8	5456	42	234181	53441	-45085	-53441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAATGTATTCCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	88273716	88275800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_88273753_88275680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017861	chr4	-	646	2	ISM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	19099	900	19099	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAATTAAGCATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	88338064	88332066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_88332584_88337935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017862	chr4	-	430	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	3744	0	3744	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGTATTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88636958	88636528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_88636500_88637000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017863	chr4	+	1087	1	FSM	ENSMUSG00000070908.2	ENSMUST00000094977.2	2850	1	1762	1	1762	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAGTTTATTATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88725529	88726616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_88725500_88726600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017864	chr4	-	798	2	FSM	ENSMUSG00000117251.2	ENSMUST00000232991.2	1332	2	57	477	57	-477	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATAACGTGCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88957372	88913831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_88914516_88957258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017865	chr4	-	645	3	ISM	ENSMUSG00000085569.2	ENSMUST00000154352.2	707	4	9550	-1	9505	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGGATACACAAGATACAG	NA	NA	NA	NA	NA	NA	NA	NA	89036913	89018899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_89019277_89023587_89023641_89036698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017866	chr4	-	380	1	Genic_Genomic	ENSMUSG00000085569.2	novel	NA	NA	NA	NA	27139	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGGATACACAAGATACAG	NA	NA	NA	NA	NA	NA	NA	NA	89019279	89018899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_89018900_89019300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017867	chr4	-	137	1	ISM	ENSMUSG00000085569.2	ENSMUST00000138655.2	430	2	4121	0	4121	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTCTCCTCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	89042297	89042160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_89042200_89042300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017868	chr4	+	2765	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	30	2	30	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGATCAGATTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	89055388	89099316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017869	chr4	-	3729	7	NNC	ENSMUSG00000008489.19	novel	1591	7	NA	NA	-4	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTGTATCTTTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	91260295	91139002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197089_91260132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017870	chr4	-	1290	1	FSM	ENSMUSG00000095937.2	ENSMUST00000119978.2	1002	1	-72	-216	-72	216	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATATATCATAATATTCT	NA	NA	NA	NA	NA	NA	NA	NA	91740978	91739688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_91739700_91741000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017871	chr4	-	646	6	FSM	ENSMUSG00000028533.11	ENST00000604921.5	672	6	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAAGATGATGGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92035192	92032887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_92032988_92033217_92033309_92033837_92033919_92034533_92034624_92034768_92034844_92034983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017872	chr4	-	1209	1	FSM	ENSMUSG00000054000.6	ENSMUST00000066774.6	1374	1	165	0	165	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCATGACTGTTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	93223583	93222374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_93222400_93223600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017873	chr4	+	366	1	FSM	ENSMUSG00000083179.4	ENSMUST00000121965.2	483	1	311	-194	311	194	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGTGATGATCTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	94824168	94824534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_94824200_94824500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017874	chr4	-	543	1	Genic_Genomic	ENSMUSG00000062627.10	novel	NA	NA	NA	NA	36521	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTAGCAATGTTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	94830816	94830273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_94830300_94830800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017875	chr4	-	585	2	ISM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	13463	19718	13463	-19718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGACGGATTCATACATA	NA	NA	NA	NA	NA	NA	NA	NA	94853874	94849994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_94850071_94853365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017876	chr4	-	1310	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	1880	-1	1880	1	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTCCCTTTGCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	94938579	94937269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_94937300_94938600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017877	chr4	+	117	1	FSM	ENSMUSG00002076977.1	ENSMUST00020183496.1	114	1	1	-4	1	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGCGAACTACCCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	94950887	94951004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_94950900_94951000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017878	chr4	-	742	1	FSM	ENSMUSG00000084159.2	ENSMUST00000122361.2	905	1	277	-114	277	114	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGCCTTACCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97410292	97409550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_97409600_97410300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017879	chr4	-	302	1	ISM	ENSMUSG00000028563.17	ENSMUST00000030292.12	952	7	27575	0	27575	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGACCTGTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	98243908	98243606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_98243600_98243900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017880	chr4	-	481	3	ISM	ENSMUSG00000028563.17	ENSMUST00000030292.12	952	7	17607	37	17607	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATTTGTGAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	98253876	98243643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_98243918_98246154_98246285_98253799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017881	chr4	-	276	3	ISM	ENSMUSG00000028563.17	ENSMUST00000030292.12	952	7	12684	2547	12684	-2547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTACTATGTGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98258799	98246153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_98246285_98253799_98253874_98258728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017882	chr4	+	706	2	ISM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	5842	4112	5842	-4112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGAAGAGGACTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	98817957	98819668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_98818092_98819096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017883	chr4	+	868	2	ISM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	8945	808	8945	-808	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATTCTCTCTCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	98821060	98822972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_98821263_98822306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017884	chr4	+	659	1	ISM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	11075	0	11006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	98823121	98823780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_98823100_98823800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017885	chr4	+	761	2	ISM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	37378	978	37378	-978	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAATGCATCCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	99641279	99650719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99641429_99650107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017886	chr4	+	677	1	ISM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	47119	0	47119	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCGTGTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	99651020	99651697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99651000_99651700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017887	chr4	+	719	4	ISM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	5	23761	5	-23664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGGCCTATGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	99786615	99820730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017888	chr4	+	484	4	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	5824	22460	5824	-22363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTCGGGGCTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	99818764	99822031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99818816_99819240_99819388_99820714_99820841_99821871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017889	chr4	+	552	4	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	6368	20080	6368	-19983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCCCACCTGCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	99819308	99824411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99819388_99820714_99820841_99821871_99822063_99824255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017890	chr4	+	522	4	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	8929	8372	8929	-8275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGCCACCCGCAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	99821869	99836119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99822063_99824255_99824411_99827183_99827300_99836061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017891	chr4	+	1068	5	ISM	ENSMUSG00000025791.19	ENST00000650546.1	2102	11	40427	0	14242	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGTGAGATGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	99827182	99844394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99827300_99836061_99836198_99839080_99839265_99841165_99841274_99843871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017892	chr4	+	839	4	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	23137	220	23137	-123	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCATCTCCTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	99836077	99844271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99836198_99839080_99839265_99841165_99841301_99843871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017893	chr4	+	336	2	ISM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	26129	3185	26129	-3088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGCCCTGTACCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	99839069	99841306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99839265_99841165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017894	chr4	+	450	1	ISM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	57431	0	31101	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTCGCTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	99844041	99844491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_99844000_99844500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017895	chr4	-	939	1	ISM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	111977	0	111977	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	101010502	101009563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_101009600_101010500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017896	chr4	+	1615	3	ISM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	4676	180	4601	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATATTTTGGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	101509590	101516381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_101509672_101513305_101513493_101515034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017897	chr4	+	1096	2	NNC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	8315	-616	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAAATGTCCCTCTACGG	NA	NA	NA	NA	NA	NA	NA	NA	101513304	101515945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_101513490_101515034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017898	chr4	+	1395	1	Genic_Genomic	ENSMUSG00000035212.15	novel	NA	NA	NA	NA	10178	1	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTTGCATTTCATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	101515167	101516562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_101515200_101516600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017899	chr4	+	500	2	Genic_Genomic	ENSMUSG00000081121.2	novel	655	1	NA	NA	9	23	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGTTAAGACCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	101732552	101733221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_101732844_101733012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017900	chr4	+	1557	2	ISM	ENSMUSG00000028525.17	ENSMUST00000097949.11	2465	10	12861	-483	12741	483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGTTTTGTAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	102459780	102463541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102459967_102462170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017901	chr4	+	430	3	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	0	61356	0	-61356	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATAAGAATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	102617584	102724893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102617763_102709966_102710162_102724836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017902	chr4	+	150	2	ISM	ENSMUSG00000028524.22	ENST00000682938.1	2444	18	203	117353	-27	-76088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACTGGCTTCAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	102617694	102710161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102617763_102710079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017903	chr4	+	107	2	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	107257	59244	107120	-59244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTTTCTTTTTAAACG	NA	NA	NA	NA	NA	NA	NA	NA	102724841	102727005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102724894_102726950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017904	chr4	+	137	2	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	149350	17509	149213	-17509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGGAACTGCATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102766934	102768740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102766987_102768655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017905	chr4	+	117	2	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	151069	13965	150932	-13965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCCAACCGATGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	102768653	102772284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102768742_102772255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017906	chr4	+	564	4	ISM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	154669	-2	154532	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGCACCTTCTCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	102772253	102786251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102772349_102775977_102776053_102784657_102784783_102785982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017907	chr4	+	142	2	ISM	ENSMUSG00000028524.22	ENST00000682938.1	2444	18	158501	49214	158271	-7949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCCAAGTCTGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	102775992	102778300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102776053_102778218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017908	chr4	+	406	3	NNC	ENSMUSG00000028524.22	novel	1384	12	NA	NA	158312	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGAGCACCTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102776033	102786249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_102776053_102784657_102784783_102785987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017909	chr4	+	130	2	ISM	ENSMUSG00000028524.22	ENST00000682938.1	2444	18	161140	42812	160910	-1547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCACTCCGCCTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	102778631	102784702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102778717_102784657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017910	chr4	+	360	2	NNC	ENSMUSG00000028524.22	novel	1384	12	NA	NA	166965	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGAGCACCTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102784686	102786249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_102784780_102785982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017911	chr4	+	268	1	NIC	ENSMUSG00000028524.22	novel	4305	24	NA	NA	168260	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGAGCACCTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102785981	102786249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_102786000_102786200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017912	chr4	+	109	2	ISM	ENSMUSG00000028524.22	ENST00000682938.1	2444	18	195837	7913	195607	-7913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCCTTCCCTGCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	102813328	102819601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102813408_102819571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017913	chr4	+	141	2	ISM	ENSMUSG00000028524.22	ENST00000682938.1	2444	18	204310	189	204080	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGAGACATGTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	102821801	102827325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_102821871_102827253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017914	chr4	-	664	4	ISM	ENSMUSG00000035126.20	ENST00000371023.7	1602	10	31929	0	31929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTTTTATTTAGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	102939540	102921640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_102921748_102923456_102923684_102929845_102930041_102939405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017915	chr4	-	695	4	ISM	ENSMUSG00000035126.20	ENST00000371023.7	1602	10	26800	1816	26800	-1816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCACCAAATGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	102944669	102923456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_102923684_102929845_102930041_102939405_102939539_102944529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017916	chr4	-	627	4	ISM	ENSMUSG00000035126.20	ENST00000371023.7	1602	10	23716	8205	23716	-8205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTTTTTAAAGTAACCA	NA	NA	NA	NA	NA	NA	NA	NA	102947753	102929845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_102930041_102939405_102939539_102944529_102944670_102947594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017917	chr4	+	262	1	FSM	ENSMUSG00002075410.1	ENSMUST00020182042.1	84	1	64	-242	64	242	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGACTGAGCAGGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	103421463	103421725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_103421500_103421700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017918	chr4	+	648	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1811	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCAAGAGATATGAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	103421809	103422457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_+_103421800_103422500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017919	chr4	-	2102	4	ISM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	69678	-1	69663	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAGACATAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	104897424	104891221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_104891907_104892743_104893528_104893895_104894023_104896918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017920	chr4	+	559	3	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	498	23959	498	-23959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCGCCGCCACCACATA	NA	NA	NA	NA	NA	NA	NA	NA	105015041	105066002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_105015161_105051999_105052158_105065720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017921	chr4	+	531	1	ISM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	74887	0	74887	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTGGTGCCTGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	105089430	105089961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_105089400_105090000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017922	chr4	+	645	4	FSM	ENSMUSG00000028514.16	ENST00000433802.1	644	4	-1	0	-1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATGAACAGAGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106267333	106269446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_106267550_106267980_106268106_106268496_106268643_106269288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017923	chr4	+	590	4	ISM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	93954	29073	50	0	internal_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATGAACAGAGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106267384	106269446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_106267550_106267980_106268106_106268496_106268639_106269288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017924	chr4	-	316	1	NIC	ENSMUSG00000054362.10	novel	1549	11	NA	NA	25575	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGAGGGGGTCGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	106448860	106448544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_106448500_106448900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017925	chr4	-	567	3	ISM	ENSMUSG00000054362.10	ENST00000358193.7	1681	10	6784	113	6730	-113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTACTGGGACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	106467705	106448657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106448982_106464485_106464620_106467596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017926	chr4	-	381	3	ISM	ENSMUSG00000054362.10	ENST00000358193.7	1681	10	5714	15985	5660	-15985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGCGATACCTGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	106468775	106464529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106464620_106467596_106467716_106468603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017927	chr4	-	393	3	ISM	ENSMUSG00000054362.10	ENST00000358193.7	1681	10	4037	19093	3983	-19093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCGGCCTAAAGGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	106470452	106467637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106467716_106468603_106468772_106470305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017928	chr4	-	392	3	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	3735	20153	3735	-20115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGAGAGAATTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	106470700	106468659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106468772_106470305_106470450_106470564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017929	chr4	-	406	3	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	2077	21799	2077	-21761	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGCCTGAGTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	106472358	106470305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106470450_106470564_106470700_106472231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017930	chr4	-	377	3	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1734	22105	1734	-22067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGATGTGTAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106472701	106470611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106470700_106472231_106472355_106472535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017931	chr4	-	344	3	ISM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	1247	23759	1247	-23721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGGAGACACGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	106473188	106472265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106472355_106472535_106472701_106473098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017932	chr4	+	1745	1	ISM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	2432	0	2432	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106510734	106512479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_106510700_106512500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017933	chr4	-	688	1	Genic_Genomic	ENSMUSG00000025413.14	novel	NA	NA	NA	NA	15924	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGTTTGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	106520139	106519451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_106519500_106520100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017934	chr4	-	756	2	ISM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	13197	312	13119	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTCAATGCCCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	106522944	106519764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106520429_106522852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017935	chr4	+	280	4	ISM	ENSMUSG00000061887.15	ENST00000417338.1	996	14	125745	0	124699	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGGTAAGCCGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106894798	106903585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_106894848_106895890_106895978_106897159_106897231_106903512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017936	chr4	+	1216	1	ISM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	137009	0	135576	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCTGACATACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	106905675	106906891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_106905700_106906900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017937	chr4	-	897	5	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	2367	-1	2367	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTCTGTGAGATATTAG	NA	NA	NA	NA	NA	NA	NA	NA	106921698	106913069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017938	chr4	-	957	5	ISM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	38	4677	38	-4677	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAGGGCTAAGATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106924027	106917747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017939	chr4	-	2837	1	ISM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	41556	0	41291	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATATCTATTTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	106994188	106991351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106991400_106994200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017940	chr4	-	2946	2	ISM	ENSMUSG00000028619.16	ENSMUST00000058585.14	766	5	30672	-2627	30672	2583	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCAAGTGTGAAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	107004807	106994146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_106996997_107004711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017941	chr4	+	736	4	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	137	10309	9	-10011	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAACTGTGTTTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	107035732	107047884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017942	chr4	+	369	2	NNC	ENSMUSG00000028618.12	novel	1148	6	NA	NA	111	-14828	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGAATCTGGTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	107035834	107043067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_107036115_107042978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017943	chr4	+	446	4	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	7369	8453	7241	-8155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTATTTTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107042964	107049740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107043081_107044815_107044911_107047731_107047885_107049658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017944	chr4	+	421	4	ISM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	9219	7608	9091	-7310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTAGTATGTACACG	NA	NA	NA	NA	NA	NA	NA	NA	107044814	107050585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107044911_107047731_107047885_107049658_107049741_107050495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017945	chr4	+	434	4	ISM	ENSMUSG00000028618.12	ENSMUST00000106753.3	1148	6	12000	3084	12000	-3084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTGGTTTTAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	107047723	107054811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107047885_107049658_107049741_107050495_107050578_107054702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017946	chr4	+	646	4	ISM	ENSMUSG00000028618.12	ENSMUST00000106753.3	1148	6	13933	-40	13933	40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTAGTTGCATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	107049656	107057935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107049741_107050495_107050578_107054702_107054812_107057564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017947	chr4	+	400	1	Genic_Genomic	ENSMUSG00000028618.12	novel	NA	NA	NA	NA	22072	2	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTGTTGGGCTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	107057795	107058195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_107057800_107058200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017948	chr4	-	471	1	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	19548	0	19548	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	107091181	107090710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_107090700_107091200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017949	chr4	-	513	2	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	5856	9696	5856	-9696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACCAGCCCATTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	107104873	107100406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_107100537_107104490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017950	chr4	-	568	2	ISM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	122	13835	122	-13835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCACTGAGGCCTACGGG	NA	NA	NA	NA	NA	NA	NA	NA	107110607	107104545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_107104978_107110471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017951	chr4	+	608	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTCTGATTCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	107111121	107137125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017952	chr4	+	134	1	Genic_Genomic	ENSMUSG00000063172.14	novel	NA	NA	NA	NA	25881	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATTTTTTTTATATAAA	NA	NA	NA	NA	NA	NA	NA	NA	107137002	107137136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_107137000_107137100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017953	chr4	-	739	3	FSM	ENSMUSG00000034785.16	ENST00000322679.10	732	3	-2	-5	-2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGACAACCAGAAATAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	107164324	107149370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_107149620_107154793_107154934_107163974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017954	chr4	-	738	3	NIC	ENSMUSG00000034785.16	novel	1690	4	NA	NA	-2	4	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGACAACCAGAAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	107164324	107149371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_107149620_107154793_107154938_107163978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017955	chr4	-	785	3	FSM	ENSMUSG00000034785.16	ENST00000388876.3	596	3	0	-189	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGACAACCAGAAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	107164315	107149371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_107149620_107150945_107151146_107163978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017956	chr4	-	251	1	NIC	ENSMUSG00000034785.16	novel	1690	4	NA	NA	14494	4	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGACAACCAGAAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	107149622	107149371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_107149400_107149600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017957	chr4	-	730	3	NIC	ENSMUSG00000034785.16	novel	732	3	NA	NA	1	3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTGACAACCAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	107164321	107149372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_107149620_107154793_107154934_107163978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017958	chr4	-	718	3	NNC	ENSMUSG00000034785.16	novel	732	3	NA	NA	7	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTGACAACCAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	107164308	107149372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_107149620_107154793_107154931_107163974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017959	chr4	-	728	3	NNC	ENSMUSG00000034785.16	novel	732	3	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTGACAACCAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	107164322	107149372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_107149620_107154793_107154931_107163978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017960	chr4	-	385	3	ISM	ENSMUSG00000034785.16	ENST00000524406.5	541	4	9177	20	9177	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCTGTCCTGGAAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	107154939	107149580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_107149620_107150945_107151146_107154793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017961	chr4	-	357	3	ISM	ENSMUSG00000034785.16	ENST00000524406.5	541	4	29	1481	29	-1481	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGTGGACACAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	107164087	107151041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_107151146_107154793_107154934_107163974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017962	chr4	-	309	3	ISM	ENSMUSG00000034785.16	ENSMUST00000082426.11	1690	4	298	2409	48	-1510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTGGCCAGGAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	107164068	107151070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_107151146_107154793_107154938_107163978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017963	chr4	+	740	5	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	26692	-1	26692	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	107198251	107217020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017964	chr4	+	313	2	ISM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	21736	25899	21736	-25899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCACACTTCTGGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	107246716	107247644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107246804_107247418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017965	chr4	+	290	2	ISM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	22449	25737	22449	-25737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTGAGACAGCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	107247429	107247806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107247659_107247745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017966	chr4	+	523	4	FSM	ENSMUSG00000028609.7	ENST00000371466.4	472	4	-51	0	36	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTATTTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	107736987	107744599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_107737143_107738089_107738149_107742113_107742197_107744373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017967	chr4	+	240	3	ISM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	122	4245	35	-4223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCTTTATTGACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	107737073	107740376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107737143_107738089_107738149_107740264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017968	chr4	+	215	3	ISM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	1177	2424	1090	-2402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCATGCATGACATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	107738128	107742197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107738149_107740264_107740376_107742113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017969	chr4	+	214	1	Genic_Genomic	ENSMUSG00000028609.7	novel	NA	NA	NA	NA	7370	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAATATGTGAATTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	107744408	107744622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_107744400_107744600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017970	chr4	+	2833	6	ISM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	1649	-1	1563	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTAGTGATGAAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	107748658	107756582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017971	chr4	-	555	1	Genic_Genomic	ENSMUSG00000028607.17	novel	NA	NA	NA	NA	18966	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCCTTTTTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	107761731	107761176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_107761200_107761700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017972	chr4	-	1027	2	ISM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	16184	62	16074	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGCTAACTCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	107764623	107761239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_107761761_107764117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017973	chr4	-	2115	5	FSM	ENSMUSG00000028607.17	ENST00000636891.1	2112	5	2	-5	2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCATGTAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	107780695	107761387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_107761761_107764052_107765423_107769837_107769945_107771460_107771542_107780511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017974	chr4	-	2083	5	NNC	ENSMUSG00000028607.17	novel	2112	5	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTGGTGTTCATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107780673	107761392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_107761756_107764052_107765423_107769837_107769945_107771460_107771542_107780511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017975	chr4	+	277	3	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	2	10246	2	-10246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGAGCCTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	107825753	107859416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107825908_107834800_107834881_107859373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017976	chr4	+	288	3	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	9046	8034	9046	-8034	internal_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTACCAGTGATGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	107834797	107861628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107834881_107859373_107859417_107861466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017977	chr4	+	419	3	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	35752	4189	35752	-4189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCCTACTGTACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	107861503	107865473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107861687_107864686_107864787_107865337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017978	chr4	+	383	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	39624	2600	39624	-2600	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATCAGGTGTGTCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	107865375	107867062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107865572_107866875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017979	chr4	+	317	2	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	41138	1960	41138	-1960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTCTGTTCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	107866889	107867702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107867071_107867566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017980	chr4	+	423	3	ISM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	41812	71	41812	-71	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGCCTAGACCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	107867563	107869591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107867702_107868089_107868193_107869409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017981	chr4	+	208	1	ISM	ENSMUSG00000008932.11	ENSMUST00000106713.5	3007	11	43930	1063	43707	4	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCCAGACCCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	107869458	107869666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_107869500_107869700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017982	chr4	-	1457	5	FSM	ENSMUSG00000028603.16	ENSMUST00000106701.2	772	5	27	-712	27	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGCTTTTACTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	107928589	107901034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017983	chr4	-	1016	1	Genic_Genomic	ENSMUSG00000028603.16	novel	NA	NA	NA	NA	26509	1	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGCTTTTACTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	107902050	107901034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_107901000_107902000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017984	chr4	-	209	1	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAGAGAGAAAGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	108009877	108009668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_-_108009700_108009900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017985	chr4	+	691	4	ISM	ENSMUSG00000028601.19	ENSMUST00000116309.10	1238	11	8519	-1	8467	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	108031181	108036505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_108031372_108034269_108034321_108035567_108035616_108036103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017986	chr4	+	405	1	NIC	ENSMUSG00000028601.19	novel	1307	10	NA	NA	13386	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	108036100	108036505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_108036100_108036500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017987	chr4	-	334	3	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	22808	0	22808	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTATGTATTCAGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	108044612	108040846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108040943_108041629_108041692_108044436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017988	chr4	-	98	1	NIC	ENSMUSG00000034645.15	novel	2283	14	NA	NA	26476	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTATGTATTCAGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	108040944	108040846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_108040800_108040900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017989	chr4	-	364	3	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	20501	3620	20501	-3620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAAAGGACTGACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	108046919	108044466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108044632_108046643_108046689_108046765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017990	chr4	-	331	3	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	18063	5913	18063	-5913	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGGATTGAGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	108049357	108046759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108046928_108049106_108049161_108049248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017991	chr4	-	226	3	NNC	ENSMUSG00000034645.15	novel	1265	11	NA	NA	16174	-8259	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTGAGCTGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	108051246	108049105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_108049161_108049248_108049349_108051175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017992	chr4	-	317	3	NNC	ENSMUSG00000034645.15	novel	1265	11	NA	NA	13901	-8433	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCATCACCTCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	108053519	108049279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_108049349_108051175_108051245_108053340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017993	chr4	-	320	2	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	8888	12494	8888	-12494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTGAACTAAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	108058532	108053340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108053518_108058389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017994	chr4	-	306	2	ISM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	3	17543	3	-17543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTAGGCTGTATCATG	NA	NA	NA	NA	NA	NA	NA	NA	108067417	108058389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108058531_108067252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017995	chr4	-	1074	3	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	34471	17868	34471	-17868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACCCTCAATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	108123770	108112397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108112575_108117146_108117288_108123014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017996	chr4	-	996	3	ISM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	28659	22685	28659	-22685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGCTTTGTTTCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	108129582	108117214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108117288_108123014_108123770_108129414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017997	chr4	+	1525	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	126	2063	126	-2063	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTCATCATGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108185462	108196678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_108185488_108189407_108189549_108195319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017998	chr4	+	1405	1	ISM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	12000	0	12000	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGTTGGTTGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	108197336	108198741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_108197300_108198700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000017999	chr4	-	108	1	FSM	ENSMUSG00000084593.3	ENSMUST00000122644.3	107	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCCATGAATCTGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	108394793	108394685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_108394700_108394800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018000	chr4	+	340	3	ISM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	4528	8615	4528	-8615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCGCTGTGAGCGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	108481664	108482705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_108481745_108482042_108482202_108482604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018001	chr4	+	327	3	ISM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	7890	5506	7890	-5506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTCATTCACCATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	108485026	108485814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_108485146_108485226_108485400_108485779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018002	chr4	+	324	2	ISM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	13313	328	13313	-328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTGCCTTTCAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	108490449	108490992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_108490501_108490719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018003	chr4	+	328	1	ISM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	13856	0	13856	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGTAGCCATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	108490992	108491320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_108491000_108491300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018004	chr4	-	1321	2	ISM	ENSMUSG00000028568.17	ENST00000313334.13	2375	7	17233	0	15572	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGAACAGGGAAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	108673556	108670422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108670482_108672294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018005	chr4	-	2035	1	NIC	ENSMUSG00000028568.17	novel	2375	7	NA	NA	15605	3	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGGTTGTTAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	108673523	108671488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_108671500_108673500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018006	chr4	-	2288	4	ISM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	5716	-1855	5716	222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCCTGGTCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	108683412	108672173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018007	chr4	+	1329	1	FSM	ENSMUSG00000073775.5	ENSMUST00000102738.4	1629	1	301	-1	301	1	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTCTCTTGATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	108705282	108706611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_108705300_108706600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018008	chr4	+	1421	5	FSM	ENSMUSG00000028567.9	ENST00000648686.1	1423	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTATTAAAACTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	108705645	108719292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_108706110_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018009	chr4	+	684	5	ISM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	18574	352	4728	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTTTTCTATAGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	108710371	108718972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018010	chr4	+	714	1	Genic_Genomic	ENSMUSG00000028567.9	novel	NA	NA	NA	NA	12969	2	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTTGGTTACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	108718612	108719326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_108718600_108719300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018011	chr4	+	1960	1	Genic_Genomic	ENSMUSG00000003411.11	novel	NA	NA	NA	NA	51076	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGTATCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108798562	108800522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_108798600_108800500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018012	chr4	+	842	1	ISM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	60281	0	60166	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAACACTTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	108918132	108918974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_108918100_108919000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018013	chr4	-	448	1	ISM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	55925	505	55925	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108919294	108918846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108918800_108919300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018014	chr4	-	443	2	ISM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	55437	375	55423	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTCTTCCTTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	108919796	108919221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_108919530_108919661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018015	chr4	+	441	1	ISM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	107109	0	44318	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	109244573	109245014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_109244600_109245000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018016	chr4	-	3142	1	ISM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	22436	0	22436	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTAAACCAGAGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	109311436	109308294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_109308300_109311400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018017	chr4	-	1113	2	FSM	ENSMUSG00000028551.15	ENSMUST00000063531.5	1106	2	-5	-2	-5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTCCTGTGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	109522574	109518070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_109518824_109522214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018018	chr4	-	2411	3	NNC	ENSMUSG00000028551.15	novel	2471	3	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	109524322	109518072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_109518824_109522210_109522355_109522806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018019	chr4	-	2460	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	109524375	109518072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_109518824_109522214_109522355_109522806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018020	chr4	-	1109	2	NNC	ENSMUSG00000028551.15	novel	1106	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	109522568	109518072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_109518824_109522210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018021	chr4	+	388	2	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	128	253140	128	-253140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTACACTGCTTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	109533912	109568017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_109534270_109567986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018022	chr4	+	360	3	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	185221	72991	185221	-72991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAAGACATTAAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	109719005	109748166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_109719161_109740832_109740970_109748098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018023	chr4	+	381	3	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	248708	28258	248708	-28258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCTTCCTGTCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	109782492	109792899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_109782576_109783081_109783160_109792679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018024	chr4	+	465	3	ISM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	249342	1946	249342	-1946	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGAAAAAAGTAATAAACA	NA	NA	NA	NA	NA	NA	NA	NA	109783126	109819211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_109783160_109792679_109792896_109818995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018025	chr4	+	378	1	ISM	ENSMUSG00000010517.8	ENST00000396153.7	4728	20	287000	418	286997	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTTGAAAAGCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	109820781	109821159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_109820800_109821200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018026	chr4	-	353	1	ISM	ENSMUSG00000028546.18	ENSMUST00000106598.8	3997	7	81255	2198	80617	13	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTACAAAGTAATGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	110063469	110063116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_110063100_110063500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018027	chr4	-	983	3	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	74308	118	73606	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACATAGATAGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	110070480	110063255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_110063857_110068622_110068849_110070324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018028	chr4	-	625	3	ISM	ENSMUSG00000028546.18	ENSMUST00000102722.9	4107	7	75235	2566	75235	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAAATATATACGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	110068851	110063499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_110063857_110066936_110066976_110068622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018029	chr4	-	378	2	NNC	ENSMUSG00000028546.18	novel	3761	6	NA	NA	75353	-477	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATCGCCAGCCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	110068733	110063614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_110063882_110068622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018030	chr4	-	415	3	ISM	ENSMUSG00000028546.18	ENSMUST00000106597.10	4149	7	73611	6004	73611	-3800	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAATTAAAACTCCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	110070475	110066937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_110066976_110068622_110068849_110070324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018031	chr4	-	453	3	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	60938	5521	60236	-5521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCCCTCTCCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	110083850	110068658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_110068849_110070324_110070479_110083741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018032	chr4	-	835	4	ISM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	24	7186	24	-7186	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTGTTTCCTTGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	110144764	110070323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_110070479_110083741_110083846_110108477_110108719_110144429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018033	chr4	-	631	3	ISM	ENSMUSG00000028546.18	ENST00000651347.1	1775	7	0	20610	0	-20602	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTCGATATACCGACTT	NA	NA	NA	NA	NA	NA	NA	NA	110148114	110083739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_110083846_110108477_110108719_110147830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018034	chr4	+	241	2	ISM	ENSMUSG00000085399.8	ENSMUST00000123272.2	2908	4	6929	563	6929	-563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAGAAATTCCAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	114773382	114777752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114773508_114777636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018035	chr4	-	604	1	Genic_Genomic	ENSMUSG00000028719.9	novel	NA	NA	NA	NA	27211	8	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGATATCTGTTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	114817128	114816524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_114816500_114817100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018036	chr4	-	995	5	ISM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	17906	1870	17807	132	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCAGATGACTGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	114826532	114818402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018037	chr4	-	393	1	ISM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	25512	2001	25413	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCACATTTAAAATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	114818926	114818533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_114818500_114818900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018038	chr4	-	393	3	ISM	ENSMUSG00000028719.9	ENST00000450808.2	922	5	14	2018	14	-2018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTCTCAGGCCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	114844325	114820552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_114820630_114822079_114822233_114844162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018039	chr4	-	590	4	ISM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	47	4036	47	-2034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCTTGGAAAAGAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	114844391	114820568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_114820630_114822079_114822233_114826414_114826562_114844162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018040	chr4	+	522	3	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	6549	32446	6549	-32446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAAGATCCATTCG	NA	NA	NA	NA	NA	NA	NA	NA	114863905	114866715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114863992_114864332_114864521_114866467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018041	chr4	+	445	3	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	7051	31817	7051	-31817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATTAGTCTACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	114864407	114867344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114864521_114866467_114866716_114867260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018042	chr4	+	379	3	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	9127	30108	9127	-30108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTTCTTCCATTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	114866483	114869053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114866716_114867260_114867345_114868990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018043	chr4	+	691	4	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	13912	18176	13912	-18176	internal_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGCCATCTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	114871268	114880985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114871422_114873368_114873485_114878671_114878787_114880678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018044	chr4	+	739	3	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	23918	9092	23918	-9092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATCTTCCATTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	114881274	114890069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114881615_114887065_114887235_114889839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018045	chr4	+	373	2	NNC	ENSMUSG00000028718.17	novel	5285	17	NA	NA	24004	-11981	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCGCCTGGCTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	114881360	114887180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_114881619_114887065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018046	chr4	+	494	3	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	29795	3445	29795	-3445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTTGTTGGTAAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	114887151	114895716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114887235_114889839_114890069_114895534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018047	chr4	+	565	3	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	32590	2647	32590	-2647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAACTAGGTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	114889946	114896514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114890069_114895534_114895728_114896264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018048	chr4	+	605	2	ISM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	38907	438	38907	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACGCAGATAGTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	114896263	114898723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114896516_114898370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018049	chr4	+	367	1	ISM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	41439	1232	41438	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCATTTCTCTTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	114898794	114899161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_114898800_114899200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018050	chr4	+	2555	3	ISM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	28320	0	27827	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	115623589	115634524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115623710_115631034_115631203_115632257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018051	chr4	+	644	2	ISM	ENSMUSG00000028710.19	ENSMUST00000175725.8	996	9	12616	-317	12616	317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCCACTTCTATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	115657555	115668775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115657623_115668198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018052	chr4	+	563	1	ISM	ENSMUSG00000028710.19	ENSMUST00000176047.8	2330	9	26938	0	24009	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCACACCCCCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	115668948	115669511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115668900_115669500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018053	chr4	+	2884	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTGGGAAGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	115685288	115693382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018054	chr4	+	865	3	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	36184	609	36184	-609	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGGCTGAGCAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	115732613	115735838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115732743_115733777_115733822_115735146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018055	chr4	+	824	1	ISM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	39229	0	39194	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	115735623	115736447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115735600_115736400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018056	chr4	-	778	1	Genic_Genomic	ENSMUSG00000028706.15	novel	NA	NA	NA	NA	19762	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTTCTTGAGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115890815	115890037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_115890000_115890800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018057	chr4	-	927	3	ISM	ENSMUSG00000028706.15	ENSMUST00000165493.8	3920	6	13201	-286	13201	286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGGTGAGTTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	115897376	115890817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_115891509_115892948_115893074_115897265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018058	chr4	-	548	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCCTTCCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	115932268	115924160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018059	chr4	-	540	3	NNC	ENSMUSG00000063882.13	novel	547	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCCTTCCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	115932268	115924160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_115924370_115927059_115927222_115932099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018060	chr4	-	155	1	ISM	ENSMUSG00000063882.13	ENSMUST00000050580.11	402	4	7912	0	7912	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	115924316	115924161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_115924200_115924300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018061	chr4	-	522	4	NNC	ENSMUSG00000063882.13	novel	547	4	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	115932245	115924161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_115924370_115927061_115927222_115927933_115927955_115932112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018062	chr4	-	515	4	NNC	ENSMUSG00000063882.13	novel	547	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	115932239	115924161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_115924370_115927059_115927222_115927936_115927955_115932112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018063	chr4	-	532	3	NIC	ENSMUSG00000063882.13	novel	547	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	115932274	115924161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_115924370_115927059_115927222_115932112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018064	chr4	-	535	3	NNC	ENSMUSG00000063882.13	novel	547	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	115932266	115924161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_115924370_115927061_115927222_115932099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018065	chr4	+	268	1	FSM	ENSMUSG00000078238.5	ENSMUST00000128518.2	297	1	176	-147	176	147	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAAAATAATGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	115924640	115924908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_115924600_115924900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018066	chr4	+	342	2	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	86	17566	86	-17566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCTTACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	115932551	115936674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115932805_115936585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018067	chr4	+	359	2	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	14152	3962	14152	-3962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGAATGCTGGGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	115946617	115950278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115946767_115950068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018068	chr4	+	486	3	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	17639	1815	17639	-1815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAAGTTCCTAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115950104	115952425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115950330_115952073_115952239_115952329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018069	chr4	+	249	3	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	19663	1212	19663	-1212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAATTTCTTCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	115952128	115953028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115952239_115952329_115952429_115952988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018070	chr4	+	436	3	ISM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	20521	486	20521	-486	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGCCCATCCTCAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	115952986	115953754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115953112_115953339_115953416_115953519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018071	chr4	+	254	1	Genic_Genomic	ENSMUSG00000028703.15	novel	NA	NA	NA	NA	21522	1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCCTTCTTGATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	115953987	115954241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_115954000_115954200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018072	chr4	+	799	3	ISM	ENSMUSG00000028700.15	ENST00000371992.1	2877	23	10	7941	10	-7530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCCAGAACCAGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	115994484	116009104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_115995026_116008270_116008441_116009016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018073	chr4	+	952	4	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	15580	4702	1427	-4290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCTTGGCAAGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	116010054	116012344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116010174_116011038_116011138_116011288_116011417_116011738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018074	chr4	+	805	5	ISM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	17293	3909	3140	-3497	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTAGGATGGGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	116011767	116013137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018075	chr4	+	782	2	ISM	ENSMUSG00000028700.15	ENSMUST00000106494.3	2226	21	7550	-412	7550	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTTTGTAATAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116016177	116017046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116016290_116016376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018076	chr4	+	672	1	Genic_Genomic	ENSMUSG00000028700.15	novel	NA	NA	NA	NA	7748	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTTGTAATAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	116016375	116017047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_116016400_116017000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018077	chr4	+	162	1	ISM	ENSMUSG00000028696.13	ENSMUST00000030461.5	2115	9	30526	4	30526	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGCAACAGTACAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	116395274	116395436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116395300_116395400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018078	chr4	-	243	1	Genic_Genomic	ENSMUSG00000028693.16	novel	NA	NA	NA	NA	26190	6	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTGGAATTATATAT	NA	NA	NA	NA	NA	NA	NA	NA	116458485	116458242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_116458200_116458500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018079	chr4	-	409	3	ISM	ENSMUSG00000028693.16	ENSMUST00000081182.5	1461	13	24674	-16	24674	16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTCTTAAATATTGG	NA	NA	NA	NA	NA	NA	NA	NA	116460001	116458789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116458991_116459288_116459418_116459922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018080	chr4	-	287	3	ISM	ENSMUSG00000028693.16	ENSMUST00000081182.5	1461	13	23416	1133	23416	-1133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGTCAGAAAGAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	116461259	116459938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116460001_116460084_116460142_116461091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018081	chr4	-	408	3	ISM	ENSMUSG00000028693.16	ENSMUST00000081182.5	1461	13	23122	1289	23122	-1289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCCATGGTGAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	116461553	116460094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116460142_116461091_116461259_116461359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018082	chr4	-	269	2	ISM	ENSMUSG00000028693.16	ENSMUST00000081182.5	1461	13	22658	2554	22658	-2554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTGAACAGAAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	116462017	116461359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116461549_116461937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018083	chr4	-	241	3	ISM	ENSMUSG00000028693.16	ENSMUST00000081182.5	1461	13	21714	3132	21714	-3132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGCAATTTCTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	116462961	116461937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116462012_116462105_116462192_116462880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018084	chr4	-	271	3	ISM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	13087	4632	13068	-4075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGTTATTCTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	116471607	116462880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116462961_116469168_116469279_116471526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018085	chr4	-	288	3	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	8959	10379	8496	-10379	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATAATGTAGATGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	116476179	116469184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116469279_116471526_116471608_116476066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018086	chr4	-	237	3	ISM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	5127	12724	4664	-12724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTATGTCTTGGGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	116480011	116471529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116471608_116476066_116476178_116479963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018087	chr4	-	1413	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	116508870	116493706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018088	chr4	+	390	3	ISM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	0	8891	0	-7341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTTGGTCTATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	116542740	116549128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116542858_116544603_116544721_116548972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018089	chr4	+	274	3	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	69	-7385	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGCGCTTCTGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	116542809	116549084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_116542862_116544610_116544721_116548972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018090	chr4	+	402	3	ISM	ENSMUSG00000028691.13	ENSMUST00000106470.8	877	6	1515	6264	1515	-6264	internal_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTTAAGGGTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	116544598	116550205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116544721_116548972_116549127_116550079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018091	chr4	+	414	3	ISM	ENSMUSG00000028691.13	ENSMUST00000106470.8	877	6	5883	5425	5883	-5425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCATCTGCCTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	116548966	116551044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116549127_116550079_116550203_116550913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018092	chr4	+	583	3	ISM	ENSMUSG00000028691.13	ENSMUST00000106470.8	877	6	6988	-219	6988	219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTAAACGTGAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	116550071	116556688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116550203_116550913_116551045_116556367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018093	chr4	+	338	2	NNC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	7876	157	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATCTTCTATCAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	116550959	116556626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_116551039_116556367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018094	chr4	+	352	1	Genic_Genomic	ENSMUSG00000028691.13	novel	NA	NA	NA	NA	14595	11	mono-exon	FALSE	NA	NA	NA	NA	NA	794	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATCTTAGAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	116557678	116558030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_116557700_116558000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018095	chr4	-	666	1	Genic_Genomic	ENSMUSG00000028690.5	novel	NA	NA	NA	NA	5466	4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTCCTTGAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	116560137	116559471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_116559500_116560100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018096	chr4	-	713	2	ISM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	3810	966	3810	-966	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGGATTTCCTGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	116561793	116560441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116561065_116561703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018097	chr4	+	162	1	ISM	ENSMUSG00000028689.15	ENSMUST00000106463.8	1159	11	6309	0	6013	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTCTGTAAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	116572139	116572301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116572100_116572300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018098	chr4	+	1022	1	ISM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	82273	0	61538	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAATATGATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	116660417	116661439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116660400_116661400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018099	chr4	-	1481	3	ISM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	1893	-2	1801	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTTATTTCTTATCGC	NA	NA	NA	NA	NA	NA	NA	NA	116662944	116661196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116662253_116662328_116662492_116662682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018100	chr4	-	1055	1	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	2492	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	116662253	116661198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_116661200_116662300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018101	chr4	+	334	4	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	31	1529	28	-1529	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGTGGGTGCACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	116672787	116673706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116672932_116673158_116673233_116673509_116673552_116673632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018102	chr4	+	235	3	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	750	1338	-125	-1338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATAGCCTGGCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	116673506	116673897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116673552_116673632_116673705_116673779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018103	chr4	+	289	3	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	872	1162	-3	-1162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGTAATGAGGTGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	116673628	116674073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116673705_116673779_116673894_116673974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018104	chr4	+	402	4	ISM	ENSMUSG00000028687.18	ENST00000488731.6	581	5	1	1150	1	245	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTCAGAGGTGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	116673632	116675480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116673705_116674865_116675003_116675084_116675235_116675437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018105	chr4	+	260	3	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	1021	1038	146	-1038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGCTGCCATGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	116673777	116674197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116673894_116673974_116674073_116674151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018106	chr4	+	531	4	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	1395	231	520	-231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAGCAAAGGTGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	116674151	116675004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116674297_116674376_116674432_116674580_116674773_116674865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018107	chr4	+	330	3	ISM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	1974	0	1099	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACCTTTGTTGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	116674730	116675235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116674773_116674865_116675003_116675084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018108	chr4	+	510	4	ISM	ENSMUSG00000028687.18	ENST00000488731.6	581	5	1232	0	1232	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGAGAACTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	116674863	116676630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_116675003_116675084_116675235_116675437_116675480_116676451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018109	chr4	-	342	2	Antisense	novelGene_ENSMUSG00000028687.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGGAGGAAGAGACCGA	NA	NA	NA	NA	NA	NA	NA	NA	116676630	116675080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_-_116675242_116676449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018110	chr4	-	354	2	Antisense	novelGene_ENSMUSG00000028687.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGAGGAGGAAGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	116676630	116675082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_-_116675256_116676449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018111	chr4	+	181	1	NIC	ENSMUSG00000028687.18	novel	1486	13	NA	NA	2818	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGAGAACTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	116676449	116676630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_116676400_116676600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018112	chr4	-	1805	1	FSM	ENSMUSG00000043155.5	ENSMUST00000055436.5	1804	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCCTCTGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	116678904	116677099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_116677100_116678900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018113	chr4	-	1233	7	ISM	ENSMUSG00000028684.15	ENST00000652287.1	1080	8	219	-255	219	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGCTCCTTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	116850666	116847160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018114	chr4	-	490	1	Genic_Genomic	ENSMUSG00000028684.15	novel	NA	NA	NA	NA	3235	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGGCTCCTTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	116847650	116847160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_116847200_116847600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018115	chr4	-	655	5	ISM	ENSMUSG00000028684.15	ENST00000636836.1	1076	8	839	0	839	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTAGCATGTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	116850046	116847415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116847646_116848589_116848691_116848817_116848956_116849760_116849923_116850022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018116	chr4	-	565	1	ISM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	4879	0	4879	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGCTTTTCCTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	116977936	116977371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116977400_116977900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018117	chr4	-	856	4	ISM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	3633	0	3633	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGGCCTTATCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	116987527	116985851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018118	chr4	-	858	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	6	-4	6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGAGAGGCTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	117013434	117011019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018119	chr4	-	772	6	NNC	ENSMUSG00000047675.16	novel	860	6	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	117013354	117011023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_117011185_117011495_117011626_117011834_117012011_117012206_117012305_117012767_117012875_117013254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018120	chr4	-	963	3	ISM	ENSMUSG00000028678.14	ENSMUST00000106436.8	2378	19	16423	-509	16423	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATTCTGTGTGATTATC	NA	NA	NA	NA	NA	NA	NA	NA	117019518	117016830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117017580_117019206_117019312_117019409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018121	chr4	+	448	3	FSM	ENSMUSG00000048772.16	ENSMUST00000062824.12	991	3	11	532	11	-532	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCGTCATGCTCTACCG	NA	NA	NA	NA	NA	NA	NA	NA	117109158	117125245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_117109332_117123056_117123173_117125086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018122	chr4	+	831	3	FSM	ENSMUSG00000048772.16	ENST00000372235.7	830	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATCCTGGGGGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	117109223	117125783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_117109332_117123056_117123173_117125176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018123	chr4	+	783	3	NNC	ENSMUSG00000048772.16	novel	830	3	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTATCCTGGGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	117109263	117125782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_117109332_117123063_117123173_117125176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018124	chr4	+	447	1	ISM	ENSMUSG00000048772.16	ENST00000372235.7	830	3	16109	3	15796	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTATCTATCCTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	117125332	117125779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_117125300_117125800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018125	chr4	-	726	1	ISM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	224864	0	16584	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGTGTTTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	117129385	117128659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117128700_117129400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018126	chr4	-	891	3	ISM	ENSMUSG00000028677.20	ENSMUST00000102690.9	1842	10	15418	204	15418	-196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGGGACCGAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	117130551	117128864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117129573_117130249_117130325_117130443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018127	chr4	-	886	3	ISM	ENSMUSG00000028677.20	ENST00000372247.6	2896	15	6622	28080	6622	-27618	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGGCCAGTTATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	117347492	117156741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117156788_117164742_117164876_117346785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018128	chr4	-	925	2	ISM	ENSMUSG00000028677.20	ENST00000372247.6	2896	15	26	218154	26	-217692	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCGAGTCCAGAGGATCGG	NA	NA	NA	NA	NA	NA	NA	NA	117354088	117346815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117347528_117353875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018129	chr4	+	565	3	ISM	ENSMUSG00000028542.18	ENST00000357730.6	2160	13	6670	10790	6499	-10790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGGGGACCTGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	117713065	117714669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_117713229_117713886_117714019_117714399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018130	chr4	+	496	3	NNC	ENSMUSG00000028542.18	novel	1876	12	NA	NA	7853	-4466	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGACAAGATCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	117714419	117720993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_117714671_117720625_117720763_117720885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018131	chr4	+	477	3	ISM	ENSMUSG00000028542.18	ENSMUST00000163288.2	2107	13	14319	3783	14319	-3620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGGGTGTGTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	117720885	117721839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_117721021_117721109_117721214_117721601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018132	chr4	+	561	2	ISM	ENSMUSG00000028542.18	ENSMUST00000163288.2	2107	13	18389	-12	18389	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAATTGGGGGGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	117724955	117725634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_117725127_117725244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018133	chr4	+	470	1	ISM	ENSMUSG00000028542.18	ENSMUST00000063857.11	3146	15	34312	9	19448	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATTCCTGTCTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	117726014	117726484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_117726000_117726500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018134	chr4	-	873	1	NIC	ENSMUSG00000028541.15	novel	2312	8	NA	NA	8795	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCCCTTGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117731202	117730329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_117730300_117731200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018135	chr4	-	1431	5	ISM	ENSMUSG00000028541.15	ENST00000309519.8	1972	7	1791	2	1791	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCCCTTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117738206	117730330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018136	chr4	-	866	4	ISM	ENSMUSG00000028541.15	ENST00000309519.8	1972	7	1168	3967	1168	-3797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTAGTAGAGGTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	117738829	117734295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117734417_117734635_117734827_117738064_117738301_117738511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018137	chr4	-	1532	4	ISM	ENSMUSG00000028541.15	ENST00000356836.10	2634	7	6	4303	6	-4135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTCTCTTAGTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	117740050	117734633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117734827_117738064_117738301_117738511_117738868_117739303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018138	chr4	-	893	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	107	0	98	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	117744419	117741522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018139	chr4	-	893	1	Genic_Genomic	ENSMUSG00000028540.7	novel	NA	NA	NA	NA	2501	4	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGGCCTAAACAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	117746728	117745835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_117745800_117746700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018140	chr4	-	1193	3	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	1830	203	1830	-203	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATATTTAACCAGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	117747399	117746042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117746874_117746951_117747129_117747214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018141	chr4	-	898	3	ISM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	1001	1212	1001	-1212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCCGACCACCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	117748228	117747051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117747129_117747214_117747899_117748091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018142	chr4	-	1202	2	ISM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	249	17285	249	-17285	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTACTCTCCAGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	117771947	117768967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117769707_117771484
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018143	chr4	-	659	1	ISM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	202065	13	174838	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGAATCTGGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	117790022	117789363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117789400_117790000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018144	chr4	-	1725	9	FSM	ENSMUSG00000028538.13	ENST00000353126.8	1737	9	13	-1	13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCTCTGAATCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	117964878	117789367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018145	chr4	-	685	3	ISM	ENSMUSG00000028538.13	ENST00000372369.5	1035	11	167166	-304	167166	304	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTATCATTTTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	117797694	117789939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117790334_117797206_117797354_117797550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018146	chr4	-	594	7	FSM	ENSMUSG00000028538.13	ENST00000528371.5	596	7	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCGGACACCAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	117964857	117790242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_117790334_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018147	chr4	-	643	6	ISM	ENSMUSG00000028538.13	ENST00000372369.5	1035	11	147600	0	147600	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCCGGACACCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117817260	117790243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117790334_117797206_117797354_117797550_117797608_117815624_117815812_117816271_117816368_117817194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018148	chr4	-	339	4	FSM	ENSMUSG00000028538.13	ENST00000531816.1	341	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCCGGACACCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	117964858	117790243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_117790334_117871901_117871995_117889036_117889080_117964745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018149	chr4	-	466	6	FSM	ENSMUSG00000028538.13	ENST00000372362.6	465	6	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGCAGCGGTATCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	117964861	117790262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_117790334_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018150	chr4	-	483	3	ISM	ENSMUSG00000028538.13	ENST00000372374.7	1717	10	149078	7617	149047	-6944	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGACTGGGCAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	117815813	117797206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117797354_117797550_117797698_117815624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018151	chr4	-	638	6	ISM	ENSMUSG00000028538.13	ENST00000372369.5	1035	11	143244	6966	143244	-6947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGAGGACTGGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	117821616	117797209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117797354_117797550_117797608_117815624_117815812_117816271_117816368_117817194_117817259_117821526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018152	chr4	-	418	3	ISM	ENSMUSG00000028538.13	ENST00000372374.7	1717	10	148536	7961	148505	-7288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATTCCTGGGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	117816355	117797550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_117797698_117815624_117815812_117816271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018153	chr4	+	251	2	ISM	ENSMUSG00000006395.17	ENST00000372432.5	806	8	28	2290	28	-2290	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGGTACCCCGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	118217255	118217580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118217429_118217502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018154	chr4	+	218	2	ISM	ENSMUSG00000006395.17	ENSMUST00000006562.6	910	9	2427	0	2410	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATATGTGTATATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	118219637	118219941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118219695_118219780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018155	chr4	-	579	4	FSM	ENSMUSG00000033253.19	ENST00000372450.8	579	4	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGACATCTTCTCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	118266472	118259598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_118259771_118260017_118260186_118262622_118262749_118266359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018156	chr4	-	576	4	NNC	ENSMUSG00000033253.19	novel	579	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGACATCTTCTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	118266473	118259599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_118259771_118260020_118260186_118262622_118262749_118266359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018157	chr4	+	1112	6	ISM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	1531	0	1531	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	118268093	118272308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018158	chr4	+	1755	7	FSM	ENSMUSG00000006390.16	ENST00000413844.3	1425	7	8	-338	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTTGTTCAACGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	118285264	118290150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018159	chr4	+	1304	6	ISM	ENSMUSG00000006390.16	ENSMUST00000067896.4	1137	8	1013	-356	1013	13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAAATGAGGTGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	118287910	118289825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018160	chr4	+	1058	1	Genic_Genomic	ENSMUSG00000006390.16	novel	NA	NA	NA	NA	2196	1	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTTGTTCAACGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	118289093	118290151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_118289100_118290200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018161	chr4	-	1113	3	FSM	ENSMUSG00000050854.10	ENST00000439858.6	1109	3	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGCAGACATTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	118401245	118398731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_118399569_118399797_118399958_118401129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018162	chr4	+	1673	4	ISM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	2810	619	2810	-619	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGGGATTGTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	118480805	118484354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118480884_118481331_118481426_118482719_118482883_118483016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018163	chr4	+	1386	1	Genic_Genomic	ENSMUSG00000028729.16	novel	NA	NA	NA	NA	5593	1	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCATGATGTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	118483588	118484974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_118483600_118485000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018164	chr4	+	249	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	111	17495	111	-17495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGCTATGCCACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	118966018	118977685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118966170_118977587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018165	chr4	+	252	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	11678	5707	11678	-5707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGCAGGTAAGCAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118977585	118989473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118977684_118989319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018166	chr4	+	359	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	23410	5345	23410	-5345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCACCAGCTGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	118989317	118989835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118989481_118989639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018167	chr4	+	349	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	23763	4748	23763	-4748	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGGAGAACCGGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	118989670	118990432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118989881_118990293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018168	chr4	+	321	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	24378	4482	24378	-4482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGCTGTCCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	118990285	118990698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118990457_118990548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018169	chr4	+	380	3	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	24640	3529	24640	-3529	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCTGGCCTTGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	118990547	118991651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118990737_118991051_118991157_118991565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018170	chr4	+	241	3	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	25143	2222	25143	-2222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCATCTTTGGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	118991050	118992958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118991157_118991565_118991668_118992925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018171	chr4	+	247	2	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	27096	1617	27096	-1617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCAGGGGGGTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	118993003	118993563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118993130_118993442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018172	chr4	+	251	1	ISM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	29022	0	29022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATTTTCCCTGCATACA	NA	NA	NA	NA	NA	NA	NA	NA	118994929	118995180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_118994900_118995200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018173	chr4	-	1588	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACTTATTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	119031392	119026709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_119028240_119031334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018174	chr4	-	1532	1	NIC	ENSMUSG00000045268.14	novel	2341	2	NA	NA	2812	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACTTATTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	119028241	119026709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_119026700_119028200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018175	chr4	-	1719	2	FSM	ENSMUSG00000045268.14	ENSMUST00000179290.8	1721	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTACTTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	119031051	119026712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_119028240_119030859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018176	chr4	-	1717	2	NNC	ENSMUSG00000045268.14	novel	1721	2	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTGTGTACTTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	119031045	119026712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_119028240_119030855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018177	chr4	+	619	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	0	114	0	-114	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCTAAGACAGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	119052502	119058381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_119052684_119053068_119053219_119058093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018178	chr4	+	295	2	NNC	ENSMUSG00000028643.12	novel	733	3	NA	NA	6	-4953	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGAAGCAAAGACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	119052508	119053193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_119052684_119053073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018179	chr4	+	693	3	FSM	ENSMUSG00000028643.12	ENSMUST00000097908.4	832	3	139	0	139	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	119052831	119058495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_119052973_119053068_119053219_119058093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018180	chr4	+	415	3	ISM	ENSMUSG00000028643.12	ENSMUST00000106345.3	684	4	464	190	-37	159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAACTTCCTATAAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	119053067	119058305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_119053219_119055955_119056008_119058093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018181	chr4	+	401	1	Genic_Genomic	ENSMUSG00000028643.12	novel	NA	NA	NA	NA	4994	4	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTGCTTTAGAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	119058098	119058499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_119058100_119058500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018182	chr4	-	534	4	FSM	ENSMUSG00000028642.8	ENST00000536543.5	559	4	28	-3	28	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACACCTGCCACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	119071301	119066407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_119066615_119067142_119067287_119068071_119068170_119071216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018183	chr4	-	362	2	ISM	ENSMUSG00000028642.8	ENSMUST00000030394.3	1452	7	8119	4105	4034	2	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACACCTGCCACCATC	NA	NA	NA	NA	NA	NA	NA	NA	119067295	119066408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119066618_119067142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018184	chr4	-	337	2	NNC	ENSMUSG00000028642.8	novel	559	4	NA	NA	4052	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAACACCTGCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	119067277	119066409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_119066612_119067142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018185	chr4	-	548	4	ISM	ENSMUSG00000028642.8	ENSMUST00000030394.3	1452	7	4100	4106	15	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAACACCTGCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	119071314	119066409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119066618_119067142_119067287_119068071_119068170_119071216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018186	chr4	-	362	3	ISM	ENSMUSG00000028642.8	ENST00000536543.5	559	4	2	723	2	-723	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAATCCATCTTAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	119071327	119067133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119067287_119068071_119068170_119071216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018187	chr4	-	284	1	ISM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	12587	0	12587	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTTGTTCCCCGACT	NA	NA	NA	NA	NA	NA	NA	NA	119077322	119077038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119077000_119077300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018188	chr4	+	520	3	ISM	ENSMUSG00000028641.17	ENSMUST00000102662.11	2977	16	297	12017	297	-12017	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCATCACAGGTGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	119090439	119094152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_119090628_119092442_119092596_119093973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018189	chr4	+	443	3	ISM	ENSMUSG00000028641.17	ENSMUST00000081606.7	2820	15	2944	10208	2944	-10207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATCAGCCCCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	119093972	119095962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_119094164_119095061_119095194_119095842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018190	chr4	+	341	3	ISM	ENSMUSG00000028641.17	ENSMUST00000081606.7	2820	15	7851	4498	7851	-4497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGGTAAAATCCAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	119098879	119101672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_119099002_119101218_119101347_119101581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018191	chr4	+	342	3	ISM	ENSMUSG00000028641.17	ENSMUST00000081606.7	2820	15	10193	3896	10193	-3895	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTCGTGTGCCGCACT	NA	NA	NA	NA	NA	NA	NA	NA	119101221	119102274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_119101347_119101581_119101678_119102153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018192	chr4	+	339	3	ISM	ENSMUSG00000028641.17	ENSMUST00000081606.7	2820	15	10569	2231	10569	-2230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTACAGGTGAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	119101597	119103939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_119101678_119102153_119102305_119103831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018193	chr4	+	382	2	ISM	ENSMUSG00000028641.17	ENSMUST00000081606.7	2820	15	13617	838	13617	-837	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGGCGCTTCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	119104645	119105332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_119104783_119105087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018194	chr4	+	303	1	ISM	ENSMUSG00000028641.17	ENSMUST00000030393.13	3188	15	15732	2	14839	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119105867	119106170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_119105900_119106200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018195	chr4	-	1042	4	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	12154	-1	12154	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTTTTGTCATAATTG	NA	NA	NA	NA	NA	NA	NA	NA	119139647	119135176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018196	chr4	-	483	2	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	15579	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	119136222	119135177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_119135565_119136126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018197	chr4	-	390	1	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	16234	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	NA	NA	NA	NA	NA	NA	NA	119135567	119135177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_119135200_119135600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018198	chr4	-	609	4	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	11732	1088	11732	-1088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAGAGAACCCTAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	119140069	119136265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119136397_119138766_119138850_119139342_119139646_119139977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018199	chr4	-	576	5	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	798	3588	798	-3588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCCATCATAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119151003	119138765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018200	chr4	-	893	5	ISM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	0	4164	0	-4164	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGCCAAAAAGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	119151801	119139341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018201	chr4	-	816	2	ISM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	9635	-1	9635	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACCTTGTCTAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119168046	119164355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_119165081_119167955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018202	chr4	-	767	1	NIC	ENSMUSG00000028636.15	novel	954	3	NA	NA	3080	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119276493	119275726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_119275700_119276500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018203	chr4	-	1293	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	120	30	76	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTGCCCACAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	119279497	119275756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_119276491_119278776_119278881_119279042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018204	chr4	+	1582	4	ISM	ENSMUSG00000000085.17	ENST00000361705.7	2705	10	48653	-5	48653	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTGTCTTTTTAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	120374081	120387381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_120374275_120379651_120379847_120385352_120385496_120386330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018205	chr4	+	716	1	ISM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	124162	0	61237	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTGTCTTTTTAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	120386665	120387381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_120386700_120387400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018206	chr4	+	1274	3	FSM	ENSMUSG00000047518.4	ENST00000372613.6	1262	3	-3	-9	-3	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCTAAGACTTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	120390176	120393728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_120390786_120392141_120392673_120393594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018207	chr4	+	1210	3	NNC	ENSMUSG00000047518.4	novel	1262	3	NA	NA	50	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGATGTGGGCTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	120390229	120393720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_120390786_120392144_120392673_120393594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018208	chr4	-	684	1	ISM	ENSMUSG00000032897.18	ENSMUST00000120779.8	2006	10	57575	16	32344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCGGTACTTGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	120615334	120614650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_120614600_120615300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018209	chr4	-	927	5	ISM	ENSMUSG00000032897.18	ENSMUST00000097906.12	1008	9	21577	-301	21577	3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGGTTGAAGAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	120626101	120615072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018210	chr4	-	928	4	ISM	ENSMUSG00000032897.18	ENST00000372652.5	2279	10	50391	480	25150	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCCAATGCTATGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	120622528	120615130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_120615773_120616528_120616589_120618824_120618933_120622410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018211	chr4	-	355	3	ISM	ENSMUSG00000032897.18	ENST00000456393.6	1862	10	63968	609	28790	114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGATACTGGTGCACTA	NA	NA	NA	NA	NA	NA	NA	NA	120618888	120615259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_120615491_120616528_120616589_120618824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018212	chr4	-	675	6	ISM	ENSMUSG00000032897.18	ENSMUST00000097906.12	1008	9	8977	3460	8977	-3460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAACAGGTATGTACACT	NA	NA	NA	NA	NA	NA	NA	NA	120638701	120618833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018213	chr4	+	489	3	ISM	ENSMUSG00000032890.18	ENSMUST00000106283.8	6437	8	10777	13361	-5315	-8342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGCACCTGCCACCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120729750	120740415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_120729848_120735034_120735283_120740271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018214	chr4	+	413	3	ISM	ENSMUSG00000032890.18	ENSMUST00000171363.2	977	6	7	4566	7	-4566	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAGCCCAGATTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120735072	120744191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_120735283_120740271_120740414_120744130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018215	chr4	+	457	4	ISM	ENSMUSG00000032890.18	ENSMUST00000171363.2	977	6	5215	2094	5215	-2094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGGCCCCAAGGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	120740280	120746663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_120740414_120744130_120744241_120746184_120746287_120746551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018216	chr4	+	668	3	ISM	ENSMUSG00000032890.18	ENSMUST00000171363.2	977	6	11118	-159	11118	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACAATCAGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	120746183	120748916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_120746287_120746551_120746692_120748491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018217	chr4	+	399	2	NNC	ENSMUSG00000032890.18	novel	977	6	NA	NA	11483	-14	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGAGCCTGCTGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	120746548	120748743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_120746696_120748491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018218	chr4	+	413	1	ISM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	36566	4782	13516	1	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTATGGACACTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	120748581	120748994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_120748600_120749000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018219	chr4	-	1075	1	Genic_Genomic	ENSMUSG00000028629.10	novel	NA	NA	NA	NA	2737	2	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGATGTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120779465	120778390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_120778400_120779500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018220	chr4	-	1472	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	7	517	7	-511	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGCATTACGTGGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	120782195	120778909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_120779894_120781707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018221	chr4	-	1326	1	ISM	ENSMUSG00000064141.15	ENSMUST00000106280.8	2362	6	20237	0	17972	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGATTTACAGATTAG	NA	NA	NA	NA	NA	NA	NA	NA	120788659	120787333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_120787300_120788700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018222	chr4	-	876	1	ISM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	38129	0	38129	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	120917309	120916433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_120916400_120917300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018223	chr4	-	1572	3	ISM	ENSMUSG00000049878.14	ENSMUST00000168615.8	6585	6	29252	4311	29252	-3801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAATTGAATACCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	121016479	121006880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_121008220_121012052_121012195_121016388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018224	chr4	+	677	1	FSM	ENSMUSG00000083679.2	ENSMUST00000117367.2	1146	1	719	-250	719	250	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATCTCCATAGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	121842180	121842857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_121842200_121842900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018225	chr4	+	711	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATCTCCATAGGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	122235088	122235799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_+_122235100_122235800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018226	chr4	+	1989	6	ISM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	9745	0	9733	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTGTATAATTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	122739779	122752871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018227	chr4	-	1171	1	ISM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	25694	0	25694	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGATGTTTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	122754010	122752839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_122752800_122754000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018228	chr4	-	1475	4	ISM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	23207	5	23207	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTCACCTGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122756497	122752844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018229	chr4	+	1038	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	493	1970	493	-1970	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGACCAGAACGCCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	122890384	122894308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_122890812_122893697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018230	chr4	+	330	3	FSM	ENSMUSG00000028653.17	ENST00000541099.5	330	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGTGCAGATGAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	122910474	122946394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_122910577_122945858_122945969_122946276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018231	chr4	-	181	2	Antisense	novelGene_ENSMUSG00000028653.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGACGACAAAGAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	122946347	122945856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_-_122945973_122946282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018232	chr4	+	131	1	NIC	ENSMUSG00000028653.17	novel	1907	10	NA	NA	35792	3	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGATGAGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	122946266	122946397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_122946300_122946400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018233	chr4	+	309	2	ISM	ENSMUSG00000028653.17	ENST00000372818.5	1907	10	35885	549	35799	-549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGAGACGTGGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	122946273	122948103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_122946395_122947915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018234	chr4	-	283	2	FSM	ENSMUSG00000028651.13	ENST00000647627.1	278	2	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTTGCCATGGGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	123027163	123016264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_123016411_123027026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018235	chr4	-	272	2	NNC	ENSMUSG00000028651.13	novel	278	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGAGTTGCCATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123027160	123016268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_123016407_123027026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018236	chr4	-	274	2	NNC	ENSMUSG00000028651.13	novel	278	2	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGAGTTGCCATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123027155	123016268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_123016414_123027026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018237	chr4	-	147	1	NIC	ENSMUSG00000028651.13	novel	278	2	NA	NA	10747	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGAGTTGCCATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123016415	123016268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_123016300_123016400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018238	chr4	-	445	5	ISM	ENSMUSG00000028651.13	ENST00000470213.5	572	7	2362	-2	2362	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGATTCTGCTGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	123031363	123024157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_123024348_123028847_123028949_123029388_123029471_123030664_123030692_123031318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018239	chr4	-	439	4	NNC	ENSMUSG00000028651.13	novel	572	7	NA	NA	2360	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACTGATTCTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	123031365	123024159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_123024348_123028847_123028949_123029388_123029492_123031318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018240	chr4	+	1582	1	ISM	ENSMUSG00000032744.5	ENSMUST00000040821.5	4537	5	14738	0	14738	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTGATGCTGCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	123142086	123143668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_123142100_123143700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018241	chr4	-	298	2	FSM	ENSMUSG00000028648.14	ENSMUST00000106207.8	680	2	300	82	300	-82	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCCCCTGGAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	123609819	123606584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_123606720_123609656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018242	chr4	-	243	2	ISM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	0	3219	0	-3219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCGAAAAAGGAGTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	123611995	123609721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_123609875_123611905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018243	chr4	-	824	1	Genic_Genomic	ENSMUSG00000023075.10	novel	NA	NA	NA	NA	14882	3	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCATTGGAATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	123629172	123628348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_123628300_123629200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018244	chr4	-	1028	3	ISM	ENSMUSG00000023075.10	ENST00000372984.8	1317	4	10984	-25	10984	25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCCCTGGAGCGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	123633070	123629836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_123630658_123631801_123631874_123632935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018245	chr4	-	806	1	NIC	ENSMUSG00000023075.10	novel	3052	5	NA	NA	13396	9	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTACAGGGAAAAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	123630658	123629852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_123629900_123630700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018246	chr4	-	441	3	ISM	ENSMUSG00000023075.10	ENST00000446189.6	1233	4	6687	479	6687	-479	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTACTGTGATAGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	123637367	123630430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_123630658_123631801_123631874_123637225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018247	chr4	-	456	2	ISM	ENSMUSG00000023075.10	ENST00000446189.6	1233	4	0	7273	0	-7273	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAGACTGCGTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	123644054	123637224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_123637367_123643740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018248	chr4	+	640	4	FSM	ENSMUSG00000028647.14	ENST00000494695.4	633	4	-6	-1	-6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAGCATAGTAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	123798823	123805275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_123798881_123799026_123799100_123803639_123803760_123804885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018249	chr4	+	621	4	NNC	ENSMUSG00000028647.14	novel	633	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGAGCATAGTAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	123798831	123805274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_123798881_123799026_123799100_123803649_123803760_123804885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018250	chr4	+	443	5	ISM	ENSMUSG00000028902.5	ENST00000528675.1	1507	17	3441	7436	3441	-7436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACCTGGTTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	124612128	124618619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018251	chr4	+	424	4	ISM	ENSMUSG00000028902.5	ENST00000528675.1	1507	17	10179	3868	10179	-3868	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGAGGGCCCAAGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	124618866	124622187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124618980_124620771_124620842_124621866_124622032_124622111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018252	chr4	-	440	1	Genic_Genomic	ENSMUSG00000078570.11	novel	NA	NA	NA	NA	554	5	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTCTTTTCTGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	124743712	124743272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_124743300_124743700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018253	chr4	-	967	3	FSM	ENSMUSG00000078570.11	ENSMUST00000106190.10	968	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACCTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	124744601	124743277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_124743756_124744024_124744227_124744314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018254	chr4	-	1025	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	181	17	181	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATCTGCAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	124744808	124743299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_124743756_124744024_124744227_124744441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018255	chr4	-	489	2	NNC	ENSMUSG00000078570.11	novel	659	2	NA	NA	112	-62	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTCTGGCCTGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	124744154	124743400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_124743756_124744020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018256	chr4	+	950	3	ISM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	1302	0	1302	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAAATGGTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124745773	124749035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124745813_124747666_124747810_124748267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018257	chr4	+	772	1	NIC	ENSMUSG00000028889.18	novel	1634	5	NA	NA	3792	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAAATGGTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124748263	124749035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_124748300_124749000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018258	chr4	-	362	1	Genic_Genomic	ENSMUSG00000028873.17	novel	NA	NA	NA	NA	17862	1	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCGGTCATCTGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	124812618	124812256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_124812300_124812600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018259	chr4	-	645	4	ISM	ENSMUSG00000028873.17	ENST00000373055.6	830	10	15381	-301	15381	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGGGCCCAGGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	124815099	124812487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018260	chr4	-	372	4	ISM	ENSMUSG00000028873.17	ENST00000373055.6	830	10	14623	617	14623	-502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCCAGATTCGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	124815857	124813405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_124813493_124814051_124814179_124815004_124815098_124815792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018261	chr4	-	401	4	ISM	ENSMUSG00000028873.17	ENST00000373055.6	830	10	12855	1263	12855	-1148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCACCCTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	124817625	124814051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_124814179_124815004_124815098_124815792_124815858_124817509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018262	chr4	-	348	4	ISM	ENSMUSG00000028873.17	ENSMUST00000030690.12	1264	10	10136	2100	9950	-2100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACCGAGAGTGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	124820530	124815003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_124815098_124815792_124815858_124817509_124817626_124820457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018263	chr4	-	407	5	ISM	ENSMUSG00000028873.17	ENSMUST00000030690.12	1264	10	389	2907	203	-2907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGGCAGAAGTAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	124830277	124815810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018264	chr4	-	621	5	ISM	ENSMUSG00000028873.17	ENSMUST00000030690.12	1264	10	-43	4672	1	-4672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGGAGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	124830709	124817575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018265	chr4	+	1879	2	ISM	ENSMUSG00000044730.18	ENSMUST00000094769.13	2911	5	5280	313	5280	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCCACCTGCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	124836146	124838136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124836265_124836375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018266	chr4	+	1813	1	ISM	ENSMUSG00000044730.18	ENSMUST00000094769.13	2911	5	5770	0	5770	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACATTTGGTAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	124836636	124838449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124836600_124838400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018267	chr4	+	2269	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	77	-1	77	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGGGTATTACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	124960541	124967836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018268	chr4	-	588	2	FSM	ENSMUSG00000086342.2	ENSMUST00000143705.2	620	2	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTTGTGCATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	124978708	124976649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_124976857_124978327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018269	chr4	+	444	4	ISM	ENSMUSG00000028863.14	ENST00000448519.2	666	8	967	5336	967	-5336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTGGCAGGGTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	124979936	124996824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124980054_124983667_124983756_124983894_124983941_124996631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018270	chr4	+	360	4	ISM	ENSMUSG00000028863.14	ENST00000448519.2	666	8	4698	818	4698	-818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGATTTGAATCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	124983667	125001342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124983756_124983894_124983941_124996631_124996825_125001309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018271	chr4	+	326	4	ISM	ENSMUSG00000028863.14	ENST00000448519.2	666	8	17662	0	17662	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACAACTTAGAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	124996631	125002160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124996825_125001309_125001340_125001444_125001503_125002115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018272	chr4	+	509	2	ISM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	17688	-3	17662	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCAGCTGCCTCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	124996631	125003685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124996825_125003369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018273	chr4	+	317	3	NNC	ENSMUSG00000028863.14	novel	666	8	NA	NA	17664	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACAACTTAGAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	124996633	125002160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_124996829_125001425_125001503_125002115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018274	chr4	+	658	4	ISM	ENSMUSG00000028863.14	ENST00000373075.6	1221	8	17762	123	17747	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGACATTTTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	124996716	125003577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_124996825_125001309_125001340_125002115_125002150_125003091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018275	chr4	+	508	1	ISM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	24267	3330	24224	1	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTCTTGATTTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	125003193	125003701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_125003200_125003700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018276	chr4	+	177	2	FSM	ENSMUSG00000087010.2	ENSMUST00000130055.2	306	2	131	-2	131	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGTGCGGCTTTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	125122520	125135847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_125122634_125135783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018277	chr4	+	967	1	FSM	ENSMUSG00000082062.2	ENSMUST00000118517.2	552	1	-208	-207	-208	207	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCCTGCTTTGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	125397872	125398839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_125397900_125398800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018278	chr4	+	539	5	ISM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	3555	-1	3555	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATGATGGAAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	125944272	125949326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018279	chr4	+	3108	1	ISM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	30523	0	30484	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTGAGTCGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	125982880	125985988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_125982900_125986000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018280	chr4	+	944	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGCCTGATGCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	125990415	125992378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_125990603_125991621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018281	chr4	+	647	1	ISM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	1313	2	1283	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTCTGTGCCTGATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	125991728	125992375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_125991700_125992400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018282	chr4	+	1268	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	96	0	96	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126041891	126043668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_126042425_126042743_126042839_126043028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018283	chr4	+	223	2	ISM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	683	973	-105	-964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCGAGCGCCTTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	126042219	126042694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126042425_126042676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018284	chr4	+	1139	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGCGACTCAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126042329	126043658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_126042839_126043028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018285	chr4	+	178	1	ISM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	1695	0	1166	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCTCACTGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126043490	126043668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126043500_126043700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018286	chr4	-	1133	1	ISM	ENSMUSG00000043962.17	ENST00000354618.10	4266	11	29181	0	29181	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	126059007	126057874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126057900_126059000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018287	chr4	-	1380	5	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	20921	-477	20921	477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCCTTTCTGACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	126067267	126058589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018288	chr4	-	1264	5	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	15829	6419	15829	1150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGATGCCCGGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	126072359	126065485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018289	chr4	-	1820	4	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	13575	10132	13575	-2563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACTAAATACCTAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	126074613	126069198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126069241_126069976_126070150_126071654_126072351_126073704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018290	chr4	-	1118	3	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	7805	13225	7805	-5656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGATAAGGAGAAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126080383	126072291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126072351_126073704_126074608_126080227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018291	chr4	-	1037	3	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	3	14734	3	-7165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGGTAAGAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	126088185	126073800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126074608_126080227_126080382_126088109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018292	chr4	-	264	1	ISM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	23847	0	23795	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126126223	126125959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126126000_126126200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018293	chr4	-	287	2	ISM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	23177	493	23177	-493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGGACCCCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	126126841	126126453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126126560_126126660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018294	chr4	-	266	2	ISM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	21776	1930	21776	-1930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCAGGCGGGCGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	126128242	126127890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126128030_126128115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018295	chr4	-	339	2	ISM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	21369	2155	21317	-2154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGACCTCGGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	126128701	126128114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126128312_126128559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018296	chr4	-	270	2	ISM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	19452	2799	19452	-2799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAGGGGCGGGTTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	126130566	126128759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126128889_126130425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018297	chr4	-	228	2	ISM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	16086	6354	16086	-6354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAAGGCTCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	126133932	126132314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126132426_126133815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018298	chr4	-	322	3	ISM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	14049	8617	14049	-8617	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGCTTAAAGCCGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	126135969	126134577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126134671_126135573_126135643_126135809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018299	chr4	-	330	2	ISM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	114	9965	114	-9965	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGGGGCCCCACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	126149904	126135925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126136161_126149809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018300	chr4	+	1338	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	0	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCCTGTTTTCCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126156117	126169678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018301	chr4	+	1107	3	FSM	ENSMUSG00000028847.9	ENST00000616074.4	1105	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTGTTTTCCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	126156151	126169679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_126156331_126167682_126167866_126168934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018302	chr4	+	406	4	FSM	ENSMUSG00000028847.9	ENST00000373159.1	405	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAACAACCCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	126156282	126167760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_126156331_126166470_126166569_126166767_126166909_126167641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018303	chr4	+	874	5	FSM	ENSMUSG00000028847.9	ENST00000373163.5	875	5	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCTCAAACCATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126156284	126169306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_126156406_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018304	chr4	+	922	5	FSM	ENSMUSG00000028847.9	ENST00000373162.5	939	5	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGATAGTCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	126156299	126169202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_126156573_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018305	chr4	+	926	2	NNC	ENSMUSG00000028847.9	novel	1105	3	NA	NA	11399	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCCTGTTTTCCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126167681	126169678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_126167870_126168940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018306	chr4	-	1309	4	ISM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	3516	0	3516	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126211980	126209839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018307	chr4	-	821	1	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	4836	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126210660	126209839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_126209800_126210700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018308	chr4	-	1056	3	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	81461	-2	81461	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGGTTCACTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126241658	126238617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126239376_126240423_126240624_126241560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018309	chr4	-	961	5	ISM	ENSMUSG00000028842.16	ENST00000324350.9	1017	6	11924	0	11924	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATCAAGAGTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	126311195	126286034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126286354_126296957_126297095_126297997_126298207_126301534_126301656_126311020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018310	chr4	-	623	4	NNC	ENSMUSG00000028842.16	novel	1017	6	NA	NA	11924	-10651	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAAATATTGATGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	126311195	126296972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_126297095_126297997_126298203_126301534_126301656_126311020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018311	chr4	+	390	2	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	2106	31561	2106	-31559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTCTGTGGACTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	126452998	126453990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126453110_126453711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018312	chr4	+	434	2	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	2981	29839	2981	-29837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTCAAGAGCCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	126453873	126455712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126454146_126455550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018313	chr4	+	313	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	4658	26753	4658	-26751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATACAAGCCATGCGATG	NA	NA	NA	NA	NA	NA	NA	NA	126455550	126458798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126455713_126457699_126457778_126458725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018314	chr4	+	528	4	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	6810	25517	6810	-25515	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCCATGTCACAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	126457702	126460034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126457778_126458725_126458799_126459482_126459592_126459763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018315	chr4	+	486	2	ISM	ENSMUSG00000042489.16	ENST00000251195.9	3969	24	9269	19284	9190	-19284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCTTTACTGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	126460082	126466265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126460375_126466071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018316	chr4	+	582	3	ISM	ENSMUSG00000042489.16	ENST00000251195.9	3969	24	15256	16940	15177	-16940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCTTATAAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	126466069	126468609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126466264_126466928_126467141_126468433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018317	chr4	+	354	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	16136	16598	16136	-16596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGTGATCCTTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	126467028	126468953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126467141_126468433_126468610_126468887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018318	chr4	+	416	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	17994	15264	17994	-15262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGGTAGTTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	126468886	126470287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126468953_126469638_126469836_126470134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018319	chr4	+	500	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	19240	13323	19240	-13321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCTCAAAGGTTGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	126470132	126472228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126470290_126471405_126471636_126472115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018320	chr4	+	308	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	23858	5789	23858	-5787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGGAGAGTCAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	126474750	126479762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126474829_126475224_126475323_126479630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018321	chr4	+	381	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	24330	5538	24330	-5536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATAGGTATCTTGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	126475222	126480013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126475323_126479630_126479796_126479897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018322	chr4	+	289	2	NNC	ENSMUSG00000042489.16	novel	3700	23	NA	NA	28740	-5530	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTGGTCCTTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	126479632	126480019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_126479800_126479897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018323	chr4	+	306	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	28787	4133	28787	-4131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACCGAAGCCAAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	126479679	126481418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126479796_126479897_126480020_126481350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018324	chr4	+	315	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	29043	1116	29043	-1114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTCTTCCTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	126479935	126484435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126480020_126481350_126481479_126484332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018325	chr4	+	295	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	30477	492	30477	-490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTTGGGACTATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	126481369	126485059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126481479_126484332_126484436_126484976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018326	chr4	+	351	3	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	33437	2	33437	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATTATATGTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	126484329	126485549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_126484436_126484976_126485060_126485387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018327	chr4	+	856	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	126571425	126603507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018328	chr4	-	948	2	ISM	ENSMUSG00000028833.14	ENSMUST00000106116.2	2434	8	6755	-280	6737	280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCAAGGCTGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	126640465	126638243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126639065_126640338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018329	chr4	-	946	2	ISM	ENSMUSG00000028833.14	ENSMUST00000106116.2	2434	8	2705	3881	2687	-3881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCTTCCTTGTCCGATA	NA	NA	NA	NA	NA	NA	NA	NA	126644515	126642404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126642513_126643677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018330	chr4	-	1167	1	Genic_Genomic	ENSMUSG00000042446.17	novel	NA	NA	NA	NA	105150	6	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTGGTTTTTATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	126756778	126755611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_126755600_126756800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018331	chr4	-	1367	3	ISM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	99309	1252	99309	-1252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCAAAAAGAATAATCT	NA	NA	NA	NA	NA	NA	NA	NA	126762619	126756983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_126758111_126759289_126759420_126762509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018332	chr4	+	1027	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGAGTCCTGCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127137572	127141603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_127137692_127140695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018333	chr4	+	911	1	NIC	ENSMUSG00000042380.9	novel	1022	2	NA	NA	3115	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGAGTCCTGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	127140691	127141602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_127140700_127141600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018334	chr4	-	505	1	ISM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	3422	0	3422	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	127219532	127219027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_127219000_127219500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018335	chr4	-	850	1	NIC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	2389	2	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGCTAGAGAAGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	127220565	127219715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_127219700_127220600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018336	chr4	-	1185	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	6	689	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGTGCTAGAGAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	127224631	127219716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_127220565_127224294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018337	chr4	-	1398	1	NIC	ENSMUSG00000046623.9	novel	1446	2	NA	NA	1598	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAGTCAGGCGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	127246276	127244878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_127244900_127246300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018338	chr4	-	1721	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGGGGCCCTTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	127251972	127248599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_127250167_127251818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018339	chr4	-	652	1	NIC	ENSMUSG00000061894.16	novel	5364	8	NA	NA	14489	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTAACTAGATGAATATC	NA	NA	NA	NA	NA	NA	NA	NA	128483884	128483232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_128483200_128483900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018340	chr4	-	1177	3	FSM	ENSMUSG00000061894.16	ENST00000373413.2	1250	3	13	60	13	-60	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCCCAGGATTGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	128498360	128483292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_128483935_128486127_128486300_128497997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018341	chr4	+	757	3	ISM	ENSMUSG00000028796.18	ENSMUST00000106080.8	3885	15	23366	29168	-15424	-29168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGAGTGTTGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	128605953	128617506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_128606153_128616701_128617094_128617340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018342	chr4	-	669	4	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	13870	0	13870	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCCTGTTTTCCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	128841390	128826145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_128826285_128828249_128828465_128839849_128840026_128841251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018343	chr4	-	761	5	ISM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	1509	15154	1509	-15154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATCGTCGCCAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	128853751	128841299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018344	chr4	+	1779	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128887018	128905322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018345	chr4	+	776	5	ISM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	5907	0	-3018	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGCACTCATCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	128892923	128902194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018346	chr4	+	362	3	ISM	ENSMUSG00000028792.15	ENST00000548033.5	783	6	6025	0	6025	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGCCAAATACTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	128901966	128956136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_128902023_128904355_128904638_128956112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018347	chr4	+	937	2	ISM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	24475	48	23932	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTAACATTATTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	128976538	128978267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_128976672_128977463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018348	chr4	+	791	1	ISM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	25465	0	24922	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	128977528	128978319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_128977500_128978300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018349	chr4	+	364	1	ISM	ENSMUSG00000001334.10	ENSMUST00000102600.4	2763	6	7231	0	7231	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGTCTTTTGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	129038022	129038386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129038000_129038400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018350	chr4	-	575	1	ISM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	7759	0	5862	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	129113945	129113370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129113400_129113900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018351	chr4	-	663	4	FSM	ENSMUSG00000050390.13	ENST00000294521.7	658	4	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGCCCCCAAGGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	129119810	129114959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_129115271_129119144_129119266_129119499_129119556_129119635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018352	chr4	-	650	4	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGCCCCCAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	129119806	129114960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_129115263_129119144_129119266_129119499_129119556_129119635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018353	chr4	+	397	2	FSM	ENSMUSG00000087575.8	ENSMUST00000153817.8	412	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTCTGCAGGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	129155772	129158803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_129155906_129158539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018354	chr4	+	416	2	FSM	ENSMUSG00000087575.8	ENSMUST00000150171.2	459	2	43	0	43	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTCTGCAGGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	129157565	129158803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_129157718_129158539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018355	chr4	+	1717	4	NNC	ENSMUSG00000001333.10	novel	1692	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGATGGATGCATCACCA	NA	NA	NA	NA	NA	NA	NA	NA	129181416	129202107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_129181582_129187019_129188170_129200134_129200264_129201834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018356	chr4	+	1636	4	FSM	ENSMUSG00000001333.10	ENST00000373484.4	1692	4	58	-2	58	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATGGATGCATCACCATA	NA	NA	NA	NA	NA	NA	NA	NA	129181495	129202109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_129181582_129187019_129188170_129200134_129200260_129201834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018357	chr4	+	1510	3	NNC	ENSMUSG00000001333.10	novel	1692	4	NA	NA	5613	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGATGGATGCATCACCA	NA	NA	NA	NA	NA	NA	NA	NA	129187050	129202107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_129188170_129200134_129200264_129201845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018358	chr4	+	314	2	NNC	ENSMUSG00000001333.10	novel	1692	4	NA	NA	18751	-393	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATAGTCAAAACTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	129200188	129203204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_129200264_129202965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018359	chr4	+	606	2	ISM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	19011	-11	18983	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTACCACCACCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	129200420	129202363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129200498_129201834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018360	chr4	-	1543	1	Genic_Genomic	ENSMUSG00000057236.11	novel	NA	NA	NA	NA	26736	8	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTTTGAGTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	129202427	129200884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_129200900_129202400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018361	chr4	+	533	1	Genic_Genomic	ENSMUSG00000001333.10	novel	NA	NA	NA	NA	20394	12	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTACCACCACCACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	129201831	129202364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_129201800_129202400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018362	chr4	-	1672	3	ISM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	17448	1558	17448	-1558	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGGGCCAACGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	129211715	129202450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129203951_129211440_129211552_129211654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018363	chr4	+	325	1	Genic_Genomic	ENSMUSG00000001333.10	novel	NA	NA	NA	NA	21865	30	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAAAACCACACACA	NA	NA	NA	NA	NA	NA	NA	NA	129203302	129203627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_129203300_129203600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018364	chr4	+	672	2	ISM	ENSMUSG00000057572.16	ENSMUST00000119480.2	527	6	8199	-502	8199	502	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGGTTGCAGATCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	129238003	129241230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129238042_129240596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018365	chr4	+	656	1	ISM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	13521	0	13204	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACTTCGTAAAAAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	129243008	129243664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129243000_129243700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018366	chr4	-	1827	3	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	17439	0	17439	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCGTGACACTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	129254470	129247420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129248298_129251497_129251668_129253690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018367	chr4	-	1194	3	ISM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	80	6270	80	-6270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCCAAGGACTCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	129271829	129253690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129254494_129263021_129263116_129271532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018368	chr4	+	293	2	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	3549	20278	3545	-20278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTACACCCTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	129359020	129360737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129359140_129360563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018369	chr4	+	342	3	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	5092	15229	5088	-15229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCCTTGTAGGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	129360563	129365786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129360784_129362786_129362842_129365719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018370	chr4	+	248	3	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	7311	14726	7307	-14726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGGCTAACCCAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	129362782	129366289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129362842_129365719_129365836_129366216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018371	chr4	+	233	3	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	10250	14475	10246	-14475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGAGCCTGGCTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	129365721	129366540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129365836_129366216_129366286_129366490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018372	chr4	+	259	2	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	11016	13271	11012	-13271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTGCCAACCCTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	129366487	129367744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129366570_129367567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018373	chr4	+	1735	2	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	12168	-12	12168	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCCTGAACCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	129367643	129382234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129367942_129380797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018374	chr4	+	484	3	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	12369	0	12365	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTCTGCTCACACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	129367840	129381015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129368039_129378829_129378934_129380833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018375	chr4	+	1494	1	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	25322	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	129380797	129382291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_129380800_129382300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018376	chr4	+	1608	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTCTGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	129407372	129409780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_129407710_129408509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018377	chr4	+	1548	2	NNC	ENSMUSG00000047945.7	novel	1605	2	NA	NA	23	-31	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATAAATGTCGTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	129407396	129409747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_129407710_129408512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018378	chr4	-	546	6	FSM	ENSMUSG00000028798.17	ENST00000679290.1	545	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTCTCCATCCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	129494295	129485843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129494201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018379	chr4	-	791	5	ISM	ENSMUSG00000028798.17	ENST00000677540.1	1035	8	5086	-1	1523	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGTCTCCATCCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	129489209	129485843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129486153_129487134_129487225_129487318_129487430_129488851_129488980_129489056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018380	chr4	-	173	2	NNC	ENSMUSG00000028798.17	novel	545	6	NA	NA	4577	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTCTCCATCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	129486155	129485844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_129485922_129486059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018381	chr4	-	86	1	NIC	ENSMUSG00000028798.17	novel	1123	11	NA	NA	4802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTCTCCATCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	129485930	129485844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_129485800_129485900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018382	chr4	-	494	5	ISM	ENSMUSG00000028798.17	ENST00000429245.1	707	7	1752	7	1752	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTACGGCCGCATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	129488980	129486062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018383	chr4	-	319	3	ISM	ENSMUSG00000028798.17	ENST00000678968.1	812	9	5086	1288	1523	-1077	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGCCCCACCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	129489209	129487132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129487225_129487318_129487430_129489093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018384	chr4	-	195	2	ISM	ENSMUSG00000028798.17	ENST00000429245.1	707	7	3291	1097	3291	-1097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCAACTATGACCATGT	NA	NA	NA	NA	NA	NA	NA	NA	129487441	129487152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129487225_129487318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018385	chr4	-	379	4	ISM	ENSMUSG00000028798.17	ENST00000678968.1	812	9	1460	1473	1460	-1262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCACTGCCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	129492835	129487317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129487430_129489093_129489207_129490666_129490733_129492747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018386	chr4	-	441	4	ISM	ENSMUSG00000028798.17	ENST00000429245.1	707	7	5	1263	5	-1263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTCACTGCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	129490727	129487318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129487430_129488851_129488980_129489056_129489207_129490675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018387	chr4	-	250	3	ISM	ENSMUSG00000028798.17	ENST00000677353.1	827	9	3558	1534	-5	-1323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTTGTCTAGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	129490737	129487378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129487430_129488851_129488980_129490666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018388	chr4	-	265	3	ISM	ENSMUSG00000028798.17	ENST00000677353.1	827	9	1460	3024	1460	-2813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGTATAGCGCCAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	129492835	129488868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129488980_129490666_129490733_129492747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018389	chr4	-	342	4	ISM	ENSMUSG00000028798.17	ENST00000677540.1	1035	8	0	3268	0	-3057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGGTATCAGTGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	129494295	129489112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129489207_129490666_129490733_129492747_129492836_129494201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018390	chr4	+	203	2	ISM	ENSMUSG00000028797.21	ENSMUST00000173758.8	453	5	-10	6448	1	-6448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTCTAGCTCTCACGGA	NA	NA	NA	NA	NA	NA	NA	NA	129494473	129494927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129494525_129494775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018391	chr4	+	313	3	ISM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	302	1349	291	-403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGGGTGGCTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	129494774	129500972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129494928_129495987_129496055_129500879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018392	chr4	+	352	3	ISM	ENSMUSG00000028797.21	ENSMUST00000173758.8	453	5	1502	-63	1502	63	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCATGTCTATCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	129495985	129501438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129496055_129500879_129500973_129501248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018393	chr4	+	196	2	NNC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	6442	28	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAATGATTGGCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129500925	129501403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_129500973_129501254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018394	chr4	+	248	1	Genic_Genomic	ENSMUSG00000028797.21	novel	NA	NA	NA	NA	7595	5	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129502078	129502326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_129502100_129502300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018395	chr4	-	411	4	ISM	ENSMUSG00000078552.11	ENST00000409358.2	657	5	2434	-2	2434	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTCTGAGGTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	129505613	129504120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129504271_129504701_129504834_129505055_129505133_129505561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018396	chr4	-	508	4	ISM	ENSMUSG00000078552.11	ENST00000409358.2	657	5	1	579	1	-579	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATAGGACAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	129508046	129504701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129504834_129505055_129505133_129505561_129505614_129507799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018397	chr4	-	1007	1	ISM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	2967	0	2964	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGTACAAATATATGTA	NA	NA	NA	NA	NA	NA	NA	NA	129509925	129508918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129508900_129509900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018398	chr4	-	1369	4	ISM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	509	1139	506	-1139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGATCTCAGGCTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	129512383	129510057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018399	chr4	-	493	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	-2	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGACTTGTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	129512891	129511891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_129512156_129512284_129512429_129512806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018400	chr4	-	2046	1	Genic_Genomic	ENSMUSG00000053841.16	novel	NA	NA	NA	NA	12683	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGCCAATCGAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	129521915	129519869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_129519900_129521900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018401	chr4	-	563	2	ISM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	56	13416	56	-13416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACATCCTGAGTACATAC	NA	NA	NA	NA	NA	NA	NA	NA	129534542	129533291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129533361_129534048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018402	chr4	-	676	2	FSM	ENSMUSG00000003731.14	ENST00000515055.1	664	2	-5	-7	-5	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTTTGGAGTGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	129541951	129537765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_129537966_129541475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018403	chr4	-	416	1	Genic_Genomic	ENSMUSG00000028790.14	novel	NA	NA	NA	NA	27931	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAACCATATGCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	129608022	129607606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_129607600_129608000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018404	chr4	-	831	5	ISM	ENSMUSG00000028790.14	ENST00000492989.1	1215	8	19479	-367	19479	367	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTAACTTTTTCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	129616474	129609514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018405	chr4	-	716	3	ISM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	45	13735	45	-11465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGTTCAAATAGAACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	129636044	129621346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_129621465_129623993_129624119_129635571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018406	chr4	+	951	2	ISM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	-1	10432	-1	-8404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACACACGCACGCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	129714012	129733339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129714395_129732770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018407	chr4	+	1928	5	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	18380	1252	-446	801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATCTGCTATCTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	129732880	129742544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018408	chr4	+	522	4	FSM	ENSMUSG00000028788.15	ENST00000470404.5	550	4	29	-1	29	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGGCAAACGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	129733355	129741744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_129733472_129736462_129736556_129740257_129740333_129741506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018409	chr4	+	257	1	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	8173	13	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATAAAGAAATCCCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	129741499	129741756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_129741500_129741800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018410	chr4	+	1083	1	Genic_Genomic	ENSMUSG00000028788.15	novel	NA	NA	NA	NA	9393	6	mono-exon	FALSE	NA	NA	NA	NA	NA	407	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATGTTTGCTCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	129742719	129743802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_129742700_129743800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018411	chr4	+	1544	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	8	-1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTCTTGACTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	130001356	130021928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018412	chr4	-	234	1	Genic_Genomic	ENSMUSG00000028776.15	novel	NA	NA	NA	NA	8958	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTCTGGGAGTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	130059627	130059393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_130059400_130059600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018413	chr4	-	318	3	ISM	ENSMUSG00000028776.15	ENSMUST00000175992.8	1847	11	7765	456	7765	-341	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACTAGGCGAGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	130060820	130059852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130059999_130060095_130060142_130060694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018414	chr4	-	196	3	ISM	ENSMUSG00000028776.15	ENSMUST00000175992.8	1847	11	7491	719	7491	-604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACCATTAAGTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	130061094	130060115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130060142_130060694_130060819_130061048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018415	chr4	-	215	2	ISM	ENSMUSG00000028776.15	ENSMUST00000175992.8	1847	11	7218	1653	7218	-1538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCATCCCCAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	130061367	130061049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130061095_130061197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018416	chr4	-	344	2	ISM	ENSMUSG00000028776.15	ENSMUST00000175992.8	1847	11	6942	1800	6942	-1685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCTAAACATGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	130061643	130061196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130061388_130061490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018417	chr4	-	274	2	ISM	ENSMUSG00000028776.15	ENSMUST00000175992.8	1847	11	6737	2097	6737	-1982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTACGCACGCGCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	130061848	130061493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130061642_130061722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018418	chr4	-	215	2	ISM	ENSMUSG00000028776.15	ENSMUST00000175992.8	1847	11	5657	2352	5657	-2237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCCTGGGCTTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	130062928	130061748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130061847_130062811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018419	chr4	-	206	2	ISM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	5401	3417	5391	-3300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCGTGCTCGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	130063194	130062811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130062927_130063103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018420	chr4	-	192	3	ISM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	827	3757	817	-3640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTGGACCCAGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	130067768	130063151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130063197_130066724_130066789_130067685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018421	chr4	-	233	2	ISM	ENSMUSG00000028776.15	ENSMUST00000175992.8	1847	11	12	8429	12	-8314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGCTGACGAGTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	130068573	130067825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130068001_130068515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018422	chr4	-	371	1	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	21353	0	21353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCCCATGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	130147658	130147287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130147300_130147700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018423	chr4	-	491	2	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	19644	299	19644	105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTATGCTCTGACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	130149367	130147586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130147859_130149148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018424	chr4	-	420	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	16850	502	16850	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGTTCCTCTACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	130152161	130147789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130147859_130149148_130149359_130152020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018425	chr4	-	354	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	16423	1948	16423	-1544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTCACCTACAGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	130152588	130149235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130149359_130152020_130152157_130152493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018426	chr4	-	326	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	14403	4807	14403	-4403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCACGGTGTGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	130154608	130152094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130152157_130152493_130152585_130154435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018427	chr4	-	399	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	12053	5206	12053	-4802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACGAGACAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	130156958	130152493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130152585_130154435_130154606_130156820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018428	chr4	-	382	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	11556	7155	11556	-6751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAGGTGAGCAACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	130157455	130154442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130154606_130156820_130156959_130157374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018429	chr4	-	278	2	NNC	ENSMUSG00000023232.18	novel	1881	10	NA	NA	12053	-6766	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCCTGCCCAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	130156958	130154457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_130154606_130156828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018430	chr4	-	412	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	10765	9532	10765	-9128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGCCCTGCCGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	130158246	130156819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130156959_130157374_130157455_130158053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018431	chr4	-	449	3	ISM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	9972	10087	9972	-9683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGCTCCAGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	130159039	130157374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130157455_130158053_130158245_130158861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018432	chr4	-	360	3	ISM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	40	10848	40	-10444	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCAGCCTTTTTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	130169339	130158135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130158245_130158861_130159024_130169250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018433	chr4	+	794	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	29	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	130202416	130209256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018434	chr4	-	364	1	Genic_Genomic	ENSMUSG00000028772.20	novel	NA	NA	NA	NA	33580	3	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCCAGGCTGATGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	130209536	130209172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_130209200_130209500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018435	chr4	-	772	4	ISM	ENSMUSG00000028772.20	ENST00000616859.4	933	5	4894	0	-34	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCGTGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	130243150	130210115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130210602_130230870_130230963_130232276_130232378_130243057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018436	chr4	-	1042	6	FSM	ENSMUSG00000028772.20	ENST00000627541.1	1040	6	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGCTGCTGTGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	130243117	130210137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_130210602_130220985_130221132_130223288_130223468_130230870_130230963_130232276_130232378_130243057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018437	chr4	-	442	4	ISM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	22774	1323	12154	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGGCCACCAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	130230962	130210498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018438	chr4	+	1380	3	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	26151	3103	26151	-3103	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTCAAAATCACCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	130545998	130550527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_130546516_130548678_130548968_130549953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018439	chr4	+	778	1	ISM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	33005	0	33005	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTGGCCCACGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	130552852	130553630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_130552900_130553600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018440	chr4	+	1110	6	FSM	ENSMUSG00000028581.18	ENST00000294507.4	1119	6	11	-2	11	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGTAAGAAACTGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	130654091	130662372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_130654159_130655947_130656078_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018441	chr4	-	1333	3	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	52708	0	50258	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGGCTCTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	131498569	131495766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131496872_131497063_131497200_131498477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018442	chr4	-	822	1	ISM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	54557	132	52107	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCGTGCCTCAATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	131496720	131495898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131495900_131496700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018443	chr4	+	409	3	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	3	13097	3	-13097	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGATCCCAGCAAATGCG	NA	NA	NA	NA	NA	NA	NA	NA	131570783	131582000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_131570990_131581026_131581125_131581895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018444	chr4	+	397	4	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	10246	7003	10246	-7003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACAGTGGAGTGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	131581026	131588094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_131581125_131581895_131582028_131585067_131585212_131588071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018445	chr4	+	474	3	ISM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	21587	0	21587	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	131592367	131595097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_131592429_131592566_131592640_131594757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018446	chr4	+	344	1	NIC	ENSMUSG00000028910.13	novel	1337	10	NA	NA	23973	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	131594753	131595097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_131594800_131595100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018447	chr4	+	778	2	ISM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	26442	757	26442	-757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCAGAGTCGCGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	131627369	131628260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_131627463_131627575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018448	chr4	+	685	1	ISM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	27405	0	27405	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	131628332	131629017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_131628300_131629000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018449	chr4	-	1700	1	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	95012	0	53345	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAAGCTCTCTAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	131681397	131679697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131679700_131681400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018450	chr4	-	1935	4	ISM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	107359	173	39480	-173	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAGAGAGAGTAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	131695262	131679988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018451	chr4	-	917	3	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	91286	1111	49619	-993	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATCCAAAAGATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	131685123	131680808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131681505_131682838_131682890_131684953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018452	chr4	-	464	1	NIC	ENSMUSG00000028906.18	novel	4948	17	NA	NA	49764	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTCAATTTCAGAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	131684978	131684514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_131684500_131685000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018453	chr4	-	723	6	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	41947	30068	280	-25251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTGATAACTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	131734462	131709765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131734268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018454	chr4	-	754	3	ISM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	26	47847	6	-43030	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTAGCCCTGTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	131776383	131727544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131727616_131734268_131734750_131776181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018455	chr4	-	607	2	ISM	ENSMUSG00000028906.18	ENSMUST00000105972.8	2577	19	22	77130	22	-46436	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCACTGTAAGGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	131734720	131730950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131731106_131734268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018456	chr4	-	563	2	ISM	ENSMUSG00000028906.18	ENST00000648181.1	2467	13	0	49905	0	-49905	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAGGTGAAGGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	131776409	131734419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131734750_131776176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018457	chr4	-	875	1	Genic_Genomic	ENSMUSG00000040025.18	novel	NA	NA	NA	NA	26306	1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGCCTGCATGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	131913096	131912221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_131912200_131913100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018458	chr4	-	660	1	ISM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	25580	1152	25368	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	131914034	131913374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131913400_131914000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018459	chr4	-	1560	2	ISM	ENSMUSG00000040025.18	ENST00000541996.5	2769	4	7198	115	7169	111	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACATGTAGTGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	131932233	131913489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131914259_131931442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018460	chr4	-	457	2	ISM	ENSMUSG00000040025.18	ENSMUST00000085181.5	955	4	1258	283	1258	-283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTCCGTAAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	131938144	131913883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131914259_131938062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018461	chr4	-	995	3	ISM	ENSMUSG00000040025.18	ENST00000541996.5	2769	4	65	18893	36	-18667	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCAACCCAGGGATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	131939366	131932267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_131933027_131938062_131938143_131939210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018462	chr4	+	1199	7	FSM	ENSMUSG00000028899.12	ENST00000495422.2	1256	7	57	0	-19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGCAGTGATCCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	132001765	132020484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_132001799_132009304_132009390_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018463	chr4	+	663	3	ISM	ENSMUSG00000028899.12	ENST00000263974.4	1348	6	18	7968	18	-7968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGGCTTGGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	132001802	132012432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132002136_132010104_132010357_132012354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018464	chr4	+	383	1	ISM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	18333	2676	18234	1	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACACAGGGTGCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	132020018	132020401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132020000_132020400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018465	chr4	+	577	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	29	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	132036017	132038335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018466	chr4	+	815	2	FSM	ENSMUSG00000086290.10	ENSMUST00000137343.9	1416	2	182	419	181	-419	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTAGTTAGCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	132036169	132037914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_132036219_132037148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018467	chr4	+	776	1	FSM	ENSMUSG00000064949.3	ENSMUST00000083015.3	130	1	7	-653	7	653	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTTTTTTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	132037557	132038333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_132037600_132038300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018468	chr4	-	649	1	ISM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	13180	0	13138	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTATGCGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	132059878	132059229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132059200_132059900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018469	chr4	-	891	3	ISM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	11142	421	11142	-421	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAGATCTGGACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	132061874	132059654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132060314_132061417_132061571_132061795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018470	chr4	+	1528	2	FSM	ENSMUSG00000091021.2	ENSMUST00000172202.2	1527	2	2	-3	2	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCTCCCAGGCAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	132079084	132080696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_132080032_132080115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018471	chr4	-	408	3	FSM	ENSMUSG00000085241.8	ENSMUST00000151374.2	426	3	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	132080926	132079244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_132079555_132079930_132080010_132080907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018472	chr4	-	320	1	NIC	ENSMUSG00000085241.8	novel	332	4	NA	NA	1083	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	132079564	132079244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_132079200_132079600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018473	chr4	-	1049	1	ISM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	4142	0	4142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGATTCTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	132187090	132186041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132186000_132187100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018474	chr4	-	1087	2	ISM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	922	431	922	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTCATAATATTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	132190310	132186472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132187425_132190175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018475	chr4	-	1187	1	ISM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	17283	0	17283	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	132220529	132219342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132219300_132220500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018476	chr4	-	220	1	Genic_Genomic	ENSMUSG00000054428.13	novel	NA	NA	NA	NA	2716	2	mono-exon	FALSE	NA	NA	NA	NA	NA	368	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTTCTACTGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	132258083	132257863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_132257900_132258100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018477	chr4	-	461	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	1	77	1	-77	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGACACATGGCTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	132260969	132257942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_132258135_132260606_132260699_132260792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018478	chr4	-	172	2	NNC	ENSMUSG00000054428.13	novel	462	2	NA	NA	169	-117	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTCCCTCACAGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	132260630	132257982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_132258131_132260606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018479	chr4	-	153	2	NNC	ENSMUSG00000054428.13	novel	462	2	NA	NA	100	-200	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATAGAGCGTCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	132260699	132258065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_132258135_132260615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018480	chr4	+	489	2	FSM	ENSMUSG00000087352.2	ENSMUST00000124471.2	485	2	1	-5	1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTCTCCTAGCGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	132259998	132260917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_132260219_132260648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018481	chr4	-	212	2	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	47	-2748	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGGTGAGGCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	132260923	132260613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_132260691_132260788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018482	chr4	+	878	2	NNC	ENSMUSG00000056529.8	novel	989	2	NA	NA	115	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTATGGCGGAGAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	132306694	132320585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_132307546_132320558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018483	chr4	+	141	2	ISM	ENSMUSG00000028886.16	ENST00000373871.8	2355	17	-2	59991	-2	-59991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGTAAAACTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	132384002	132389249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132384100_132389205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018484	chr4	+	486	4	ISM	ENSMUSG00000028886.16	ENST00000373871.8	2355	17	16244	28801	16244	-28801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTTCCCTCCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	132400248	132420439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132400344_132408066_132408205_132417015_132417102_132420272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018485	chr4	+	469	4	ISM	ENSMUSG00000028886.16	ENST00000373871.8	2355	17	24142	27046	24142	-27046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTGAAGAAACTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	132408146	132422194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132408205_132417015_132417102_132420272_132420461_132422057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018486	chr4	+	395	4	ISM	ENSMUSG00000028886.16	ENST00000373871.8	2355	17	42336	14805	42336	-14805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGGCCAACTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	132426340	132434435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132426425_132428331_132428422_132431662_132431722_132434273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018487	chr4	+	1087	5	ISM	ENSMUSG00000028886.16	ENST00000373871.8	2355	17	50332	0	50332	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGGACAGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	132434336	132449240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018488	chr4	+	3488	1	NIC	ENSMUSG00000028886.16	novel	5160	17	NA	NA	64582	1	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTTTTCTCCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132448586	132452074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_132448600_132452100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018489	chr4	-	487	1	ISM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	7163	0	7163	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTTTATTTTCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	132452694	132452207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132452200_132452700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018490	chr4	-	227	1	ISM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	24060	0	13502	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCGTGAGGGATCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	132460503	132460276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132460300_132460500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018491	chr4	-	259	2	ISM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	19098	671	8540	-671	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCGCTGACCCGCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	132465465	132460947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132461071_132465329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018492	chr4	-	772	5	FSM	ENSMUSG00000028885.9	ENST00000549094.1	804	5	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGAGTTTGGGTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	132473973	132465328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_132465464_132465547_132465729_132466939_132467113_132472398_132472497_132473788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018493	chr4	-	570	4	ISM	ENSMUSG00000028885.9	ENST00000549094.1	804	5	108	210	108	-210	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGGAACTGGCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	132473897	132465538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132465729_132466939_132467113_132472398_132472497_132473788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018494	chr4	-	319	2	ISM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	15719	6663	5161	-1611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGCTCTTGCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	132468844	132466939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132467113_132468698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018495	chr4	-	397	2	ISM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	51	13546	51	-8494	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACCAAAGCCTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	132484512	132473822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132474003_132484295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018496	chr4	+	1430	6	ISM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	3548	0	3548	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCGCCCCTGGCCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	132499193	132506063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018497	chr4	-	2239	7	FSM	ENSMUSG00000028882.14	ENST00000373931.8	2374	7	136	-1	133	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	132570301	132554232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132569993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018498	chr4	-	888	1	ISM	ENSMUSG00000028882.14	ENST00000373931.8	2374	7	15310	6	15307	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132555127	132554239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132554200_132555100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018499	chr4	-	1182	1	ISM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	29827	0	29827	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTGCACTTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	132581993	132580811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132580800_132582000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018500	chr4	-	1422	4	ISM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	23858	900	23858	-900	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGATGAAAACAGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	132587962	132581711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018501	chr4	-	755	1	ISM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	22591	0	22486	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTGATTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	132627278	132626523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132626500_132627300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018502	chr4	-	384	1	ISM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	21924	1038	21819	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGGATCTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	132627945	132627561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132627600_132627900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018503	chr4	-	142	2	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	20397	-1	20397	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGAGGAGGCTCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	132629367	132628531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132628620_132629313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018504	chr4	-	203	2	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	18421	815	18421	-815	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACCCACAAGGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	132631343	132629347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132629416_132631208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018505	chr4	-	189	2	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	11673	2712	11673	-2712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGGATCAAATGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	132638091	132631244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132631345_132638002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018506	chr4	-	285	2	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	6208	12447	6208	-12447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACCCCAGACACACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	132643556	132640979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132641138_132643429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018507	chr4	-	162	2	ISM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	26	19478	26	-19478	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTTCTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	132649738	132648010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_132648103_132649668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018508	chr4	+	327	2	ISM	ENSMUSG00000037692.15	ENST00000374011.6	6418	7	13	22484	13	-22125	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTGCAAAGACTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	132739376	132782428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132739599_132782323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018509	chr4	+	381	2	ISM	ENSMUSG00000037692.15	ENST00000374011.6	6418	7	42959	22118	15519	-21759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAGAGCTGAGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	132782322	132782794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132782515_132782605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018510	chr4	+	1544	2	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	21530	14365	21530	-14365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCCCGTGTCACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	132788333	132790188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132788376_132788686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018511	chr4	+	2173	2	ISM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	25288	-420	25288	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTCTTGTAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	132792091	132804973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132793589_132804297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018512	chr4	+	292	1	ISM	ENSMUSG00000037692.15	ENSMUST00000105915.8	6341	7	65866	200	37879	8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTCTTGTAAAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	132804682	132804974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132804700_132805000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018513	chr4	+	660	2	ISM	ENSMUSG00000028868.14	ENSMUST00000105912.2	2236	8	18266	399	18266	-399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGTGACAGGAAGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	132921947	132923416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132922219_132923027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018514	chr4	+	624	1	ISM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	68628	0	22762	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTCTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	132926443	132927067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132926400_132927100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018515	chr4	+	490	3	ISM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	8633	2460	8633	-2460	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGCCTAGGGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	132976972	132977657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_132977131_132977240_132977434_132977518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018516	chr4	-	1484	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	133005103	132993355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018517	chr4	-	355	1	ISM	ENSMUSG00000037622.15	ENSMUST00000043305.14	4191	16	46511	0	46458	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCATTTGTTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	133020124	133019769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133019800_133020100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018518	chr4	+	2107	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	10	170	10	-170	multi-exon	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGGGTTCCAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	133207452	133215079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_133207875_133213394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018519	chr4	+	1716	1	ISM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	6091	0	6091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACTGTATCTTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	133213533	133215249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_133213500_133215200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018520	chr4	-	784	4	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	11446	0	11446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCCTCGTCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	133261861	133259852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018521	chr4	-	792	5	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	10123	651	10123	-651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTTGGGCATCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	133263184	133260503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018522	chr4	-	739	5	ISM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	70	1732	70	-1732	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCATCGAGGATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	133273237	133261584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018523	chr4	+	789	4	ISM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	1620	-2	1563	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTTTTAGTGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	133313292	133319048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_133313378_133315810_133315972_133317077_133317209_133318636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018524	chr4	-	2142	4	FSM	ENSMUSG00000043257.16	ENST00000455364.2	1696	4	-4	-442	-4	192	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGTTTGATCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	133400802	133389372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_133390103_133391968_133393091_133397048_133397165_133400628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018525	chr4	-	902	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	88	0	88	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTGTCTTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133399870	133389564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_133390103_133397048_133397172_133399629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018526	chr4	+	592	2	Antisense	novelGene_ENSMUSG00000043257.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCCGGCTTCTAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	133392603	133397152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_+_133393098_133397054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018527	chr4	+	580	2	Antisense	novelGene_ENSMUSG00000043257.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTTCCTCCGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133392603	133397146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_+_133393098_133397060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018528	chr4	-	725	3	ISM	ENSMUSG00000043257.16	ENST00000374145.6	1756	4	66	2831	66	-2831	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACGTTCAGCGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	133399654	133392645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133393091_133397048_133397162_133399487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018529	chr4	-	1025	2	ISM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	67844	5427	67844	-4492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACAGGTGTCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	133413078	133411745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133411877_133412184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018530	chr4	-	258	2	ISM	ENSMUSG00000003038.16	ENSMUST00000105893.8	973	6	1404	413	1404	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTACTGGGTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	133693348	133692713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133692885_133693261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018531	chr4	-	256	3	ISM	ENSMUSG00000003038.16	ENSMUST00000136327.2	772	5	-91	1275	16	-1275	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGCTGTAAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	133695296	133694086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133694107_133694267_133694313_133695105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018532	chr4	-	2199	1	ISM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	29664	0	29167	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGAAGGTTTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	133698537	133696338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133696300_133698500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018533	chr4	-	2377	3	ISM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	17967	49	17473	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCAGTTGTGTTATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	133710231	133696416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133698565_133707434_133707543_133710110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018534	chr4	-	751	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	-4	-4	-4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTGTCCGGGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	133856104	133854712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_133855118_133855228_133855397_133855926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018535	chr4	-	581	2	ISM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	692	0	642	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGGTGTCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	133855408	133854716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133855118_133855228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018536	chr4	-	691	3	NNC	ENSMUSG00000028843.9	novel	743	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGGTGTCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	133856053	133854716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_133855118_133855233_133855397_133855926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018537	chr4	-	137	1	ISM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	1240	7	1190	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACTGCTTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	133854860	133854723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133854700_133854900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018538	chr4	-	659	3	NNC	ENSMUSG00000028843.9	novel	743	3	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTGACTGCTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	133856031	133854725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_133855118_133855228_133855385_133855920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018539	chr4	-	168	2	FSM	ENSMUSG00000028843.9	ENSMUST00000105879.2	518	2	11	339	11	-339	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGCCTGAGTCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	133856039	133855062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_133855118_133855926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018540	chr4	-	303	1	Genic_Genomic	ENSMUSG00000028840.11	novel	NA	NA	NA	NA	2002	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTATCTCTTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133970901	133970598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_133970600_133970900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018541	chr4	+	1177	3	FSM	ENSMUSG00000086322.8	ENST00000448923.2	1174	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGGCGTGAGCGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	133971093	133973022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_133971287_133971545_133971725_133972217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018542	chr4	+	1160	3	NNC	ENSMUSG00000086322.8	novel	1174	3	NA	NA	8	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGGGCGTGAGCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	133971102	133973020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_133971287_133971551_133971725_133972217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018543	chr4	+	1145	3	NNC	ENSMUSG00000086322.8	novel	1174	3	NA	NA	20	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGGGCGTGAGCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	133971114	133973020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_133971278_133971545_133971725_133972217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018544	chr4	-	316	2	ISM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	513	1381	513	-1381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGGACCTGGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	133972390	133971980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_133972242_133972335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018545	chr4	+	465	1	ISM	ENSMUSG00000037366.15	ENSMUST00000105870.8	3180	11	29478	0	24014	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGGCTGGCTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	134154259	134154724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134154300_134154700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018546	chr4	+	1060	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTGTTCAGGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	134195631	134201155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018547	chr4	+	3553	3	FSM	ENSMUSG00000037348.16	ENSMUST00000095074.4	3550	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGATTCGATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	134224313	134237548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_134224348_134227910_134227995_134234113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018548	chr4	+	1475	1	ISM	ENSMUSG00000037348.16	ENSMUST00000081525.4	2351	2	10642	0	10335	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGTTTTGACTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	134234649	134236124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134234600_134236100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018549	chr4	+	1229	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	46	0	-44	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTGGTGTCGTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	134238355	134251238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_134238481_134248782_134248913_134250264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018550	chr4	+	613	2	ISM	ENSMUSG00000078521.3	ENST00000538789.5	1224	4	12274	-9	12274	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTAGGGAGCCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	134250673	134253839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134251057_134253609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018551	chr4	-	624	1	Genic_Genomic	ENSMUSG00000046671.19	novel	NA	NA	NA	NA	6555	1	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTCATCTCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	134253483	134252859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_134252900_134253500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018552	chr4	-	1117	3	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	4779	383	2238	-369	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAGCTACAGAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	134257800	134253243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134253824_134256399_134256722_134257585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018553	chr4	-	535	3	ISM	ENSMUSG00000046671.19	ENST00000474295.5	1782	7	4823	842	2238	-842	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTGACTGCAAACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	134257800	134253716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134253824_134256399_134256613_134257585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018554	chr4	-	582	4	ISM	ENSMUSG00000046671.19	ENST00000526894.5	673	5	473	-4	473	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGACAGGAGCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	134259565	134256394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134256544_134257585_134257798_134257990_134258101_134259454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018555	chr4	-	753	4	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	3017	3538	476	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATCTGACAGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	134259562	134256398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134256722_134257585_134257798_134257990_134258101_134259454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018556	chr4	-	455	3	ISM	ENSMUSG00000046671.19	ENST00000474295.5	1782	7	4521	3607	1936	-83	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGTCCAAGGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	134258102	134256481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134256613_134257585_134257798_134257990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018557	chr4	-	523	4	ISM	ENSMUSG00000046671.19	ENST00000526894.5	673	5	-26	1218	-26	-1218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATCGCTAAAATCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	134260064	134257616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134257798_134257990_134258101_134259454_134259560_134259937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018558	chr4	-	235	2	ISM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	74	7081	74	-3543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTAAGGAGGCCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	134262505	134259941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134260064_134262392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018559	chr4	-	743	2	ISM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	701	78596	701	-78596	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTGACACAGACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	134430900	134367596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134367695_134430255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018560	chr4	-	886	1	ISM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	25585	0	25562	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	134469750	134468864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134468900_134469800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018561	chr4	-	720	1	ISM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	21393	4358	21370	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCTCACTCTAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	134473942	134473222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134473200_134473900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018562	chr4	-	821	2	ISM	ENSMUSG00000037295.8	ENST00000374338.5	2170	8	18534	635	18534	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGTTCGAGGTCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	134476778	134473857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134474544_134476643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018563	chr4	-	630	1	Genic_Genomic	ENSMUSG00000028822.12	novel	NA	NA	NA	NA	16538	1	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTCGTTATACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	134625788	134625158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_134625200_134625800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018564	chr4	-	862	4	ISM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	9601	0	9592	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	NA	NA	NA	NA	NA	NA	NA	134632734	134625159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018565	chr4	-	797	6	ISM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	1820	-271	1820	271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGGAGGCAGGCGGATT	NA	NA	NA	NA	NA	NA	NA	NA	134640506	134625430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018566	chr4	+	507	2	ISM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	49	3417	49	-3066	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCCGCGGAGGTACTAC	NA	NA	NA	NA	NA	NA	NA	NA	134650951	134651565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134651079_134651185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018567	chr4	+	574	3	ISM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	524	870	174	-519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTTCAGCTCCAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	134651426	134654112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134651794_134652603_134652744_134654045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018568	chr4	+	567	3	ISM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	1705	394	1355	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAATTGCTTATATACAAA	NA	NA	NA	NA	NA	NA	NA	NA	134652607	134654588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134652744_134654045_134654130_134654241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018569	chr4	+	399	1	Genic_Genomic	ENSMUSG00000037266.19	novel	NA	NA	NA	NA	3332	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTTGTGAATGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	134654584	134654983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_134654600_134655000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018570	chr4	+	882	4	ISM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	4032	137	4032	-137	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGCAGAGGCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	134662240	134664722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134662361_134662684_134662776_134663293_134663393_134664150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018571	chr4	+	606	1	ISM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	6045	0	6045	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTCTGTAACTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	134664253	134664859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134664300_134664900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018572	chr4	+	446	3	ISM	ENSMUSG00000070691.11	ENST00000338888.3	1494	7	97	22782	97	-22782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCAGGGGCCCGAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	134848104	134880370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134848125_134848320_134848475_134880098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018573	chr4	+	481	3	ISM	ENSMUSG00000070691.11	ENST00000338888.3	1494	7	413	20402	413	-20402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGGGGGAACTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	134848420	134882750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134848475_134880098_134880368_134882592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018574	chr4	+	2632	4	ISM	ENSMUSG00000070691.11	ENSMUST00000119564.2	1855	5	2835	-1387	2835	-422	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGCTAATAAAAAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	134882641	134904879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134882750_134890541_134890647_134898419_134898570_134902610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018575	chr4	+	2589	1	ISM	ENSMUSG00000070691.11	ENSMUST00000056977.14	3884	6	54750	0	22906	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGGCTTCTGGAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134902712	134905301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_134902700_134905300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018576	chr4	-	1401	1	ISM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	57445	0	57445	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	134942680	134941279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134941300_134942700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018577	chr4	-	1743	4	ISM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	46663	1971	46663	-1971	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCATGTCAGTCCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	134953462	134943250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018578	chr4	-	971	1	ISM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	31867	0	31682	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	NA	NA	NA	NA	NA	NA	NA	135048765	135047794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135047800_135048800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018579	chr4	-	246	2	ISM	ENSMUSG00000028809.17	ENSMUST00000030613.11	2940	17	28268	1881	28268	-1881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGCCTACCTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135052179	135051224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135051421_135052129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018580	chr4	+	261	2	Antisense	novelGene_ENSMUSG00000028809.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGGGGCAGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	135068157	135069757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr4_+_135068349_135069687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018581	chr4	-	265	2	ISM	ENSMUSG00000028809.17	ENSMUST00000030613.11	2940	17	9205	20344	9205	-20344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAAGGCACGTTCCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	135071242	135069687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135069885_135071174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018582	chr4	-	303	1	Genic_Genomic	ENSMUSG00000059713.13	novel	NA	NA	NA	NA	12783	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGAGCAGTCTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	135139920	135139617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_135139600_135139900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018583	chr4	-	654	4	FSM	ENSMUSG00000059713.13	ENST00000425530.3	654	4	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTGTGCACTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	135152702	135143749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_135143910_135145690_135145833_135147556_135147731_135152524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018584	chr4	-	167	1	FSM	ENSMUSG00000076123.3	ENSMUST00000102169.3	79	1	27	-115	27	115	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGACTGTGCACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	135143917	135143750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_135143800_135143900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018585	chr4	-	411	3	FSM	ENSMUSG00000059713.13	ENST00000436717.6	510	3	0	99	0	-99	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAGCGAAACTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	135152703	135143849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_135143910_135145690_135145863_135152524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018586	chr4	-	187	2	NNC	ENSMUSG00000059713.13	novel	510	3	NA	NA	44	-2054	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTTCCTCATCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	135152659	135145804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_135145857_135152524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018587	chr4	-	3252	1	ISM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	42480	0	42363	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGGGTCCTGTGTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	135179454	135176202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135176200_135179500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018588	chr4	+	527	4	ISM	ENSMUSG00000062157.7	ENST00000374421.7	1315	6	8294	1478	8294	-1478	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGGCATGGAAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	135426123	135431544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135426283_135428538_135428682_135431020_135431181_135431479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018589	chr4	+	680	3	ISM	ENSMUSG00000062157.7	ENST00000374421.7	1315	6	13189	185	13189	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCCATGCCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	135431018	135432837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135431181_135431479_135431611_135432450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018590	chr4	+	463	1	ISM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	18963	2469	14731	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGGACGAGGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	135432560	135433023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135432600_135433000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018591	chr4	-	602	1	FSM	ENSMUSG00000083678.4	ENSMUST00000122331.2	731	1	132	-3	132	3	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGTCCTTGAACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135443777	135443175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_135443200_135443800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018592	chr4	+	1575	5	ISM	ENSMUSG00000037157.9	ENST00000270800.2	1713	6	1125	0	1125	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCGGAGCAAGCAGGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	135461412	135478681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135461592_135464650_135464827_135471996_135472136_135475401_135475524_135477722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018593	chr4	+	505	2	ISM	ENSMUSG00000028676.18	ENSMUST00000105853.10	3058	6	133	7418	133	-7418	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATGTTCAATATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	135583190	135585708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135583603_135585615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018594	chr4	+	1182	3	ISM	ENSMUSG00000028676.18	ENSMUST00000126641.2	3754	6	7314	1797	7314	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAGTGATTAATATACTA	NA	NA	NA	NA	NA	NA	NA	NA	135590371	135595422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135590514_135590833_135590888_135594436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018595	chr4	+	291	1	ISM	ENSMUSG00000028676.18	ENSMUST00000105853.10	3058	6	9778	0	9778	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	135592835	135593126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135592800_135593100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018596	chr4	+	1164	1	ISM	ENSMUSG00000028676.18	ENSMUST00000126641.2	3754	6	12998	0	12998	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	135596055	135597219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135596100_135597200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018597	chr4	-	971	1	Genic_Genomic	ENSMUSG00000028675.13	novel	NA	NA	NA	NA	1174	1	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCTTTTTATGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	135599198	135598227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_135598200_135599200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018598	chr4	-	1318	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	3	598	3	-598	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAAATACATGTAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	135601158	135598826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_135599766_135600205_135600411_135600984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018599	chr4	+	2525	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135648045	135667622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018600	chr4	+	1087	6	ISM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	7455	0	7455	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAACGTGTGTTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	135681213	135689928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018601	chr4	+	357	3	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	165	2062	165	-2062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGGACGGGGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	135692640	135693427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135692768_135692876_135692993_135693313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018602	chr4	+	389	3	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	420	1631	420	-1631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACCGCTCACCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	135692895	135693858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135692993_135693313_135693428_135693680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018603	chr4	+	363	3	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	1203	1097	1203	-1097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTAGGAGTCAGGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	135693678	135694392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135693858_135694123_135694238_135694322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018604	chr4	+	223	3	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	1855	749	1855	-749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGCCCCACCCACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	135694330	135694740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135694390_135694481_135694568_135694662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018605	chr4	+	279	3	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	2010	471	2010	-471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTGTGGAACCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	135694485	135695018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135694568_135694662_135694741_135694899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018606	chr4	+	454	3	ISM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	2186	118	2186	-118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCCCCAGAGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	135694661	135695371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135694741_135694899_135695015_135695111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018607	chr4	+	273	2	NNC	ENSMUSG00000028671.17	novel	1537	10	NA	NA	2424	-218	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGCTCAGCCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	135694899	135695271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_135695013_135695111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018608	chr4	+	270	1	ISM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	4182	0	2744	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATTCTCACAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	135695219	135695489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135695200_135695500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018609	chr4	-	369	1	ISM	ENSMUSG00000028670.15	ENSMUST00000105852.8	1588	10	3337	0	2349	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCCTTATGTGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	135695903	135695534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135695500_135695900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018610	chr4	-	525	3	ISM	ENSMUSG00000028670.15	ENSMUST00000105852.8	1588	10	2445	550	1457	25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTATTGGAGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135696795	135696084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135696379_135696454_135696629_135696738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018611	chr4	-	289	3	ISM	ENSMUSG00000028670.15	ENSMUST00000105852.8	1588	10	2255	981	1267	-406	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCTGCCAGGGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	135696985	135696515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135696629_135696738_135696841_135696911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018612	chr4	-	914	1	Genic_Genomic	ENSMUSG00000028669.16	novel	NA	NA	NA	NA	10897	6	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCAGCCTCTGCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	135703678	135702764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_135702800_135703700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018613	chr4	-	1151	4	ISM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	1246	178	1246	-178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATGAGCTTCCTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	135713329	135702948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018614	chr4	-	356	1	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	18040	0	18040	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGAGCCTTTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	135731034	135730678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135730700_135731000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018615	chr4	-	601	3	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	14539	2001	14539	-2001	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAATTAGCATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	135734535	135732679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135732989_135733481_135733661_135734422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018616	chr4	-	445	3	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	13799	2834	13799	-2834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATGATCCCAGGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	135735275	135733512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135733661_135734422_135734535_135735090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018617	chr4	-	358	3	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	12658	3739	12658	-3739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTCTGCTGCAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	135736416	135734417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135734535_135735090_135735272_135736356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018618	chr4	-	345	3	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	11925	5676	11925	-5676	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCCTCAGTGGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	135737149	135736354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135736455_135736556_135736713_135737060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018619	chr4	-	457	3	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	11305	5922	11305	-5922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCACCAGCAGTGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	135737769	135736600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135736713_135737060_135737176_135737539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018620	chr4	-	375	2	ISM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	8820	7740	8820	-7740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCTTCAAGTCCTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	135740254	135738418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_135738720_135740180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018621	chr4	-	835	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTTGGATTTGGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	135780704	135777039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018622	chr4	-	776	5	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	684	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGGTTTGGATTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135780020	135777041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_135777328_135777590_135777702_135778484_135778614_135778924_135779032_135779877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018623	chr4	-	687	5	NNC	ENSMUSG00000059291.16	novel	833	6	NA	NA	700	-72	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTGAGTGCCCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	135780004	135777113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779028_135779877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018624	chr4	+	241	1	ISM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	23423	0	23423	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGTGTGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	135923127	135923368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_135923100_135923400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018625	chr4	+	822	3	FSM	ENSMUSG00000051351.15	ENST00000374608.3	2924	3	205	1897	205	-1897	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGGCGAGAAGCCTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	136013585	136017761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_136013793_136014499_136014627_136017273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018626	chr4	+	615	1	ISM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	5666	1595	5663	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTTTTGTTACGGAG	NA	NA	NA	NA	NA	NA	NA	NA	136019043	136019658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_136019000_136019700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018627	chr4	+	1057	3	ISM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	25306	-69	25285	69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTATTGGGCTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	136063620	136067526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_136063759_136066486_136066609_136066729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018628	chr4	+	1037	1	ISM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	28678	18765	28621	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTCAAATTCAATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	136066956	136067993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_136067000_136068000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018629	chr4	+	4868	2	FSM	ENSMUSG00000001089.15	ENSMUST00000001116.5	7246	2	2071	307	2067	-304	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATAGGTCCTTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	136269735	136276322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_136270830_136272548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018630	chr4	+	1675	2	ISM	ENSMUSG00000001089.15	ENST00000418342.5	7150	3	5747	1447	5747	-1411	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGAAATGTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	136273415	136275215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_136274129_136274253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018631	chr4	+	1151	1	Genic_Genomic	ENSMUSG00000001089.15	novel	NA	NA	NA	NA	7844	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCTGGAAACAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	136275512	136276663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_136275500_136276700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018632	chr4	-	185	2	ISM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	48396	3261	48396	-3261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAAGGTAACTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	136281602	136281115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_136281222_136281523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018633	chr4	-	1463	1	Genic_Genomic	ENSMUSG00000006699.18	novel	NA	NA	NA	NA	36548	7	mono-exon	FALSE	NA	NA	NA	NA	NA	1079	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTTCCTCCGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	137048462	137046999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_137047000_137048500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018634	chr4	-	1968	5	ISM	ENSMUSG00000006699.18	ENST00000344548.7	2214	7	21585	67	21564	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1467	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTCTCAACTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	137063446	137047077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018635	chr4	-	1639	3	NNC	ENSMUSG00000006699.18	novel	2108	6	NA	NA	28576	-135	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCAGGTTCCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	137056434	137047167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_137048500_137056023_137056222_137056325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018636	chr4	+	1384	2	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTCTCTGGAGTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	137047175	137056083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr4_+_137048514_137056037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018637	chr4	+	729	1	ISM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	63663	0	63596	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	137385113	137385842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137385100_137385800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018638	chr4	+	359	3	ISM	ENSMUSG00000041351.17	ENST00000542643.6	3045	21	9297	7903	9297	-7138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCCCCAGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	137447218	137449268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137447308_137447604_137447743_137449136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018639	chr4	+	333	2	ISM	ENSMUSG00000041351.17	ENST00000542643.6	3045	21	17677	765	17677	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCCCTGGATTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	137455598	137456406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137455711_137456185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018640	chr4	-	822	1	ISM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	53820	10	13189	2	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGGCCAGAGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	137469875	137469053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_137469100_137469900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018641	chr4	-	1213	4	ISM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	9224	194	9224	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCGGACAGGACACACACAC	NA	NA	NA	NA	NA	NA	NA	NA	137473840	137469249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018642	chr4	+	485	2	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	99432	2085	99432	-2085	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTCAAGCTGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	137688979	137690455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137689050_137690040
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018643	chr4	+	484	1	ISM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	102509	0	102509	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	137692056	137692540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137692100_137692500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018644	chr4	+	583	2	ISM	ENSMUSG00000028760.17	ENST00000356916.7	1806	10	62410	534	62410	-534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCGAGTTAGAGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	137847668	137853606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137847766_137853120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018645	chr4	+	373	3	ISM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	20014	2452	20014	-2430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACCACCCAAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	137964455	137968029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137964619_137966847_137966960_137967931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018646	chr4	+	354	1	ISM	ENSMUSG00000028759.14	ENSMUST00000105827.8	5155	13	26523	1511	25688	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCAGTACCTGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	137970129	137970483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137970100_137970500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018647	chr4	+	1402	1	ISM	ENSMUSG00000028759.14	ENSMUST00000105827.8	5155	13	26986	0	26151	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTGTCCATTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	137970592	137971994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_137970600_137972000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018648	chr4	+	1311	4	ISM	ENSMUSG00000028758.13	ENST00000375044.5	3538	14	15077	13443	15077	-12861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGCATAGGGACCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	138005105	138015832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138005560_138008667_138008778_138013742_138013897_138015239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018649	chr4	+	1126	4	ISM	ENSMUSG00000028758.13	ENST00000375044.5	3538	14	18631	10366	18631	-9784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCAGGGGTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	138008659	138018909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138008778_138013742_138013897_138015239_138015864_138018679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018650	chr4	+	1288	4	ISM	ENSMUSG00000028758.13	ENST00000375044.5	3538	14	25207	8055	25207	-7473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGATAATGGCTTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	138015235	138021220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138015864_138018679_138018910_138019424_138019657_138021022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018651	chr4	+	1162	4	ISM	ENSMUSG00000028758.13	ENST00000375044.5	3538	14	30996	0	30996	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATAAGCGCCCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	138021024	138029275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138021282_138023502_138023574_138025519_138025638_138028559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018652	chr4	+	704	5	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	2	2944	2	-2944	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTCAGGGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	138032042	138036995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018653	chr4	+	597	6	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	471	1874	471	-1874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCATGGCATGGAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	138032511	138038065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018654	chr4	+	677	6	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	3514	1639	3514	-1639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGGTCCTGGGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	138035554	138038300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018655	chr4	+	590	5	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	4880	1095	4880	-1095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGACTCCTGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	138036920	138038844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018656	chr4	+	630	5	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	5453	872	5453	-872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGTCCAGTTTCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	138037493	138039067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018657	chr4	+	1128	5	ISM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	5870	195	5870	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACCCAGGTTCAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	138037910	138039744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018658	chr4	+	855	5	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	5870	-465	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGCAATTTTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	138037910	138039474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_138038063_138038151_138038297_138038720_138038842_138038950_138039058_138039144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018659	chr4	+	593	2	NNC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	6977	-239	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCGAGAGGGACTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	138039017	138039700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_138039062_138039151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018660	chr4	+	653	1	Genic_Genomic	ENSMUSG00000028757.5	novel	NA	NA	NA	NA	7248	2	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTTCTTTTAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	138039288	138039941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_138039300_138039900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018661	chr4	-	1274	4	ISM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	8899	-3	-982	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTACACTGGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	138044719	138040719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018662	chr4	-	851	4	FSM	ENSMUSG00000028755.4	ENSMUST00000030535.4	846	4	-5	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTTTGTTCTTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	138095308	138065838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_138066312_138070817_138070876_138078494_138078607_138095100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018663	chr4	-	847	4	NNC	ENSMUSG00000028755.4	novel	846	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTTTGTTCTTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	138095300	138065838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_138066312_138070817_138070876_138078490_138078607_138095100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018664	chr4	+	361	1	FSM	ENSMUSG00000083326.5	ENSMUST00000117723.2	215	1	-72	-74	-72	74	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCACCACCACTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	138153026	138153387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_138153000_138153400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018665	chr4	+	785	3	ISM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	2955	2741	2903	513	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGTGTCTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	138164936	138166835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_138165027_138165552_138165674_138166261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018666	chr4	+	665	1	Genic_Genomic	ENSMUSG00000041241.13	novel	NA	NA	NA	NA	6879	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGTTGTGGCTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	138168912	138169577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_138168900_138169600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018667	chr4	+	404	1	NIC	ENSMUSG00000028751.14	novel	854	5	NA	NA	3054	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTCCATTATTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	138609724	138610128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_138609700_138610100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018668	chr4	-	1795	4	FSM	ENSMUSG00000041120.7	ENSMUST00000042844.7	1793	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGGACTGGCTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	138820305	138809593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_138810914_138812551_138812664_138812764_138812960_138820137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018669	chr4	-	1669	4	NNC	ENSMUSG00000041120.7	novel	1793	4	NA	NA	118	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTGGACTGGCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	138820186	138809594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_138810914_138812551_138812664_138812764_138812954_138820137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018670	chr4	-	510	1	Genic_Genomic	ENSMUSG00000050608.12	novel	NA	NA	NA	NA	28791	1	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCTGCCTTCCTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	138829633	138829123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_138829100_138829600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018671	chr4	-	829	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	4	1716	4	-1716	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGACAGTGTGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	138858420	138830840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018672	chr4	+	807	1	NIC	ENSMUSG00000028745.19	novel	1674	9	NA	NA	57618	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACACAATCGGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	139018311	139019118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_139018300_139019100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018673	chr4	+	859	6	ISM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	3456	0	3456	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTCTCCTCTGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	139041510	139045737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018674	chr4	-	374	1	Genic_Genomic	ENSMUSG00000028741.14	novel	NA	NA	NA	NA	4492	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTGTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	139075117	139074743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_139074700_139075100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018675	chr4	-	600	3	ISM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	4104	0	3826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	139075783	139074745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_139075117_139075231_139075309_139075631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018676	chr4	-	499	3	ISM	ENSMUSG00000028741.14	ENSMUST00000030513.13	930	8	3884	30	3884	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCGCGGGGTGTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	139075725	139074785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_139075114_139075231_139075309_139075631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018677	chr4	-	545	4	ISM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	10	1569	10	-1559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCACTGGCCCTCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	139079877	139076314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_139076399_139076924_139077029_139077746_139077806_139079579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018678	chr4	+	929	1	ISM	ENSMUSG00000041025.16	ENSMUST00000174078.2	5716	9	44734	0	44734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTATGCTGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	139346764	139347693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_139346800_139347700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018679	chr4	+	1060	2	ISM	ENSMUSG00000028737.16	ENST00000375341.8	1629	14	11312	-879	11312	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGCAGGACTCGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	139372344	139376464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_139372409_139375468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018680	chr4	+	1096	2	ISM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	19070	1105	12592	-1105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTGCCCCGCGTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	140447853	140449426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140447934_140448410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018681	chr4	+	1926	1	ISM	ENSMUSG00000040945.14	ENSMUST00000071169.9	3999	15	20754	0	13344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	140448605	140450531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140448600_140450500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018682	chr4	+	749	5	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	0	5412	0	-5412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACTTAAACCTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	140688513	140701092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018683	chr4	+	425	3	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	64	-7970	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGGGGCTTTCTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	140688577	140698534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_140688788_140693811_140693940_140698447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018684	chr4	+	422	4	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	120	-6267	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCGTGCACACGCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	140688633	140700237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_140688788_140693805_140693944_140698447_140698534_140700193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018685	chr4	+	444	4	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	9934	2975	9934	-2975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCACTCCCCACCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	140698447	140703529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140698534_140700193_140700331_140700974_140701092_140703425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018686	chr4	+	650	5	ISM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	11678	0	11678	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	140700191	140706504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018687	chr4	+	573	4	FSM	ENSMUSG00000060572.18	ENST00000375534.7	774	4	20	181	20	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAAGGCCTCGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	140741517	140743103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_140741613_140742293_140742382_140742525_140742600_140742787
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018688	chr4	+	354	1	ISM	ENSMUSG00000060572.18	ENSMUST00000071977.9	1073	9	4981	6	1438	5	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTCACTTTTGCGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	140742935	140743289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140742900_140743300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018689	chr4	-	1109	1	Genic_Genomic	ENSMUSG00000028923.15	novel	NA	NA	NA	NA	10686	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGATGGATATGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	140794930	140793821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_140793800_140794900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018690	chr4	-	1558	5	ISM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	4765	0	4713	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	140800903	140793822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018691	chr4	-	426	4	ISM	ENSMUSG00000028923.15	ENST00000443980.6	763	7	4754	0	4754	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGACCCACGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	140800862	140794828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_140794924_140797366_140797545_140799839_140799949_140800818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018692	chr4	-	693	6	FSM	ENSMUSG00000028923.15	ENST00000504551.6	695	6	2	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGACCCACGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	140805644	140794828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800985_140801091_140805523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018693	chr4	-	506	5	ISM	ENSMUSG00000028923.15	ENST00000443980.6	763	7	3243	2609	3243	-2609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCTCCCTCTGGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	140802373	140797437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018694	chr4	-	2437	1	Genic_Genomic	ENSMUSG00000040842.18	novel	NA	NA	NA	NA	24333	4	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCCTGTCTCATACTA	NA	NA	NA	NA	NA	NA	NA	NA	140842744	140840307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_140840300_140842700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018695	chr4	-	2698	3	ISM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	19392	472	19392	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGCTGGGGGTCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	140847685	140840783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_140843176_140845837_140846093_140847634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018696	chr4	-	865	4	FSM	ENSMUSG00000040842.18	ENST00000471507.5	861	4	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGGGAGCCTACCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	140867199	140842809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_140843176_140845837_140846090_140847634_140847685_140867002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018697	chr4	-	837	3	NNC	ENSMUSG00000040842.18	novel	861	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTAGGGGAGCCTACCAA	NA	NA	NA	NA	NA	NA	NA	NA	140867197	140842812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_140843176_140845837_140846093_140866978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018698	chr4	+	955	3	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4	9540	0	-9540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCCGTGTTGTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	140970179	140974637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140970322_140973485_140973921_140974259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018699	chr4	+	740	3	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	3444	9251	3440	-9251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTCCTTAATTGTACG	NA	NA	NA	NA	NA	NA	NA	NA	140973619	140974926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140973921_140974259_140974637_140974864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018700	chr4	+	719	3	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4083	8756	4079	-8756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGGCAGGGCTAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	140974258	140975421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140974637_140974864_140974942_140975157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018701	chr4	+	699	4	ISM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	4989	7172	4985	-7172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCTCACTTCAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	140975164	140977005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_140975421_140976297_140976459_140976537_140976691_140976876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018702	chr4	+	269	2	FSM	ENSMUSG00000085395.2	ENSMUST00000142429.2	564	2	72	223	72	-223	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCACCCTTCCACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	141005821	141006882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_141005856_141006647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018703	chr4	+	280	1	Genic_Genomic	ENSMUSG00000085395.2	novel	NA	NA	NA	NA	1081	5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAATCAGCAAATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	141006830	141007110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_141006800_141007100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018704	chr4	+	196	2	ISM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	5272	20854	5272	-20854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTATTGAGCTCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	141033822	141035841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141033893_141035715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018705	chr4	+	197	2	ISM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	21346	5925	21346	-5925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTTCAGCCATTTACC	NA	NA	NA	NA	NA	NA	NA	NA	141049896	141050770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141050047_141050723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018706	chr4	+	162	1	ISM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	27983	0	27983	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	141056533	141056695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141056500_141056700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018707	chr4	-	263	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	10670	-1	10670	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGGTCTTAAGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	141114690	141112586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141112675_141114383_141114468_141114599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018708	chr4	-	309	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	9781	1795	9781	-1795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGGGGAAAAAGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	141115579	141114382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141114468_141114599_141114689_141115444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018709	chr4	-	331	2	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	8536	2857	8536	-2857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTCGGCTAGGGTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	141116824	141115444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141115579_141116627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018710	chr4	-	374	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	7636	4063	7636	-4063	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCCGTGGCCGACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	141117724	141116650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141116842_141117387_141117499_141117652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018711	chr4	-	359	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	6529	4797	6529	-4797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACCCCGGCCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	141118831	141117384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141117499_141117652_141117723_141118656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018712	chr4	-	362	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	5422	6069	5422	-6069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTCCCTCCTGTTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	141119938	141118656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141118831_141119083_141119169_141119835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018713	chr4	-	270	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	5223	6499	5223	-6499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTAAGGGGGGCTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	141120137	141119086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141119169_141119835_141119938_141120051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018714	chr4	-	314	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	3510	7248	3510	-7248	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGAAGGCCGCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	141121850	141119835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141119938_141120051_141120137_141121723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018715	chr4	-	282	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	3006	7478	3006	-7478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGCTCTGGGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	141122354	141120065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141120137_141121723_141121850_141122269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018716	chr4	-	406	4	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	2312	9155	2312	-9155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCAACAGTGAACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	141123048	141121742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141121850_141122269_141122349_141122429_141122508_141122906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018717	chr4	-	349	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	689	9842	689	-9842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGGGGACAAGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	141124671	141122429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141122508_141122906_141123047_141124540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018718	chr4	-	306	3	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	0	10383	0	-10383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAAGGTGGTGGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	141125360	141122970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141123047_141124540_141124670_141125259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018719	chr4	+	318	2	ISM	ENSMUSG00000006221.8	ENST00000406363.2	578	3	79	1425	79	-1425	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGGCCCGCCCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	141149132	141149954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141149296_141149799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018720	chr4	+	303	2	ISM	ENSMUSG00000006221.8	ENST00000406363.2	578	3	742	37	742	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCCGGACTGAGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	141149795	141151342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141149946_141151189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018721	chr4	+	172	1	ISM	ENSMUSG00000006221.8	ENSMUST00000102486.5	2769	3	3120	1241	2156	2	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCCCCCTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	141151209	141151381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141151200_141151400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018722	chr4	+	824	5	ISM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	17877	2538	17877	-2538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGAAGACACACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	141189842	141191996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018723	chr4	-	2005	2	ISM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	17122	-3	17122	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTTGTTTTTGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	141308413	141303369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141305255_141308293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018724	chr4	+	2245	3	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	17986	368	15165	-368	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTGGTTTTGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	141538908	141542919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141539030_141539517_141539628_141540905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018725	chr4	+	2052	1	ISM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	20313	0	17492	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	141541235	141543287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_141541200_141543300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018726	chr4	-	2015	3	NNC	ENSMUSG00000040659.4	novel	2381	4	NA	NA	12968	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCCGAAGGAGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	141589263	141585451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_141587184_141587858_141587994_141589115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018727	chr4	-	2379	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCCGAAGGAGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	141602228	141585451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018728	chr4	-	187	1	ISM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	52512	614	5998	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCAAGGCACACTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	141759103	141758916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141758900_141759100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018729	chr4	-	318	2	FSM	ENSMUSG00000040616.4	ENST00000434578.6	871	2	237	316	237	-316	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCGGAGACAGAGACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	141764864	141759232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_141759402_141764715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018730	chr4	-	1110	8	ISM	ENSMUSG00000040606.15	ENST00000376030.7	2105	14	63058	3781	63058	-3781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACCATCTTCCATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	141874461	141835880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018731	chr4	-	2130	4	FSM	ENSMUSG00000057637.14	ENST00000505823.5	400	4	-1	-1729	-1	-173	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTCAACACTTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	142888678	142834133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_142835956_142838203_142838348_142868693_142868805_142888625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018732	chr4	-	350	3	NNC	ENSMUSG00000057637.14	novel	400	4	NA	NA	19869	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATGAGAGAGGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	142868808	142835862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_142835956_142838203_142838342_142868689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018733	chr4	-	351	3	NNC	ENSMUSG00000057637.14	novel	400	4	NA	NA	19874	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATGAGAGAGGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	142868803	142835862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_142835956_142838203_142838348_142868689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018734	chr4	-	1810	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCAACATTTGACACT	NA	NA	NA	NA	NA	NA	NA	NA	143026127	142994000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018735	chr4	+	504	1	ISM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	8162	0	7601	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	143147157	143147661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_143147200_143147700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018736	chr4	+	1844	1	FSM	ENSMUSG00000070610.5	ENSMUST00000118978.2	1389	1	-105	-350	-105	350	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAATTGGTTATCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	144313708	144315552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_144313700_144315600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018737	chr4	+	1348	3	ISM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	26763	93	26763	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTCAAGCAAGGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	144646409	144654686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_144646650_144650475_144650602_144653704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018738	chr4	+	1328	3	NNC	ENSMUSG00000066026.15	novel	2337	6	NA	NA	26872	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCAGTGTGACCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	144646518	144654780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_144646645_144650475_144650602_144653704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018739	chr4	+	1215	3	NNC	ENSMUSG00000066026.15	novel	2337	6	NA	NA	26928	-65	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTCTCTGCCGTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	144646574	144654714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_144646654_144650475_144650602_144653704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018740	chr4	+	1082	1	Genic_Genomic	ENSMUSG00000066026.15	novel	NA	NA	NA	NA	34056	5	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTGACCTGGTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	144653702	144654784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_144653700_144654800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018741	chr4	-	979	1	ISM	ENSMUSG00000028599.11	ENSMUST00000030336.11	3818	10	32429	0	13138	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTATCTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	144941011	144940032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_144940000_144941000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018742	chr4	-	352	1	NIC	ENSMUSG00000028599.11	novel	3818	10	NA	NA	11476	1	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGACCCTGAACCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	144942673	144942321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_144942300_144942700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018743	chr4	-	486	2	ISM	ENSMUSG00000028599.11	ENST00000376259.7	552	3	7713	0	7713	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGACCCTGAACCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	144946436	144942322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_144942671_144946298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018744	chr4	-	440	3	FSM	ENSMUSG00000028599.11	ENST00000376259.7	552	3	1	111	1	-111	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGCCGGATATG	NA	NA	NA	NA	NA	NA	NA	NA	144954148	144942433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_144942671_144946298_144946427_144954073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018745	chr4	+	1467	2	ISM	ENSMUSG00000082082.2	ENSMUST00000120870.2	1575	3	1146	77	1146	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAATACAATGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	145174455	145177381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_145174578_145176036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018746	chr4	+	1340	1	ISM	ENSMUSG00000082082.2	ENSMUST00000120870.2	1575	3	2809	0	2809	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCAAATATATTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	145176118	145177458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_145176100_145177500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018747	chr4	+	1148	2	ISM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	44730	1213	44730	-1213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCATACAGGAGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	147261224	147263823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_147261331_147262781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018748	chr4	+	1128	1	ISM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	47414	0	47414	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAATGAGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	147263908	147265036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_147263900_147265000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018749	chr4	+	1378	1	FSM	ENSMUSG00000070583.2	ENSMUST00000094481.2	1380	1	5	-3	5	3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAAATCAGGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	147953440	147954818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_147953400_147954800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018750	chr4	-	1224	1	ISM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	29865	0	29865	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	147959279	147958055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_147958100_147959300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018751	chr4	-	483	4	NNC	ENSMUSG00000029020.14	novel	2372	18	NA	NA	24679	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCACGAAGAAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	147964465	147959828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_147959916_147961407_147961543_147963170_147963368_147964401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018752	chr4	-	525	4	ISM	ENSMUSG00000029020.14	ENST00000235329.10	2469	19	24589	55	24585	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTTCACACACCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	147964559	147959883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018753	chr4	-	674	4	ISM	ENSMUSG00000029020.14	ENST00000235329.10	2469	19	21712	3341	21708	2781	internal_fragment	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGAGCGGCCCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	147967436	147963169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_147963368_147964398_147964555_147966473_147966695_147967337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018754	chr4	-	541	3	NNC	ENSMUSG00000029020.14	novel	2372	18	NA	NA	22467	2772	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAGCAGTGAGCGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	147966677	147963178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_147963368_147964398_147964555_147966481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018755	chr4	-	527	5	ISM	ENSMUSG00000029020.14	ENSMUST00000105714.8	2427	15	18948	1387	18937	-1387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGCCACAAGGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	147970207	147967337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018756	chr4	-	566	5	ISM	ENSMUSG00000029020.14	ENSMUST00000105714.8	2427	15	10077	5710	10066	-5710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTCGCTGGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	147979078	147971660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018757	chr4	-	560	4	ISM	ENSMUSG00000029020.14	ENSMUST00000105714.8	2427	15	6050	7175	6039	-7175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTCCAAGTGTCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	147983105	147973125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_147973202_147974570_147974734_147979019_147979156_147982920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018758	chr4	-	744	1	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	26271	0	26229	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGTCTGGTTATACTTC	NA	NA	NA	NA	NA	NA	NA	NA	147994953	147994209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_147994200_147995000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018759	chr4	-	1004	3	ISM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	20824	391	20782	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACTGTACTGGGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	148000400	147994600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_147995332_147997676_147997803_148000253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018760	chr4	+	1255	2	ISM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	235	2380	235	-2380	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTCAGCTTCGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	148025586	148029391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148026515_148029064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018761	chr4	-	1247	1	Genic_Genomic	ENSMUSG00000029007.9	novel	NA	NA	NA	NA	9660	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGCTGTGTGATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	148162763	148161516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_148161500_148162800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018762	chr4	-	1490	3	ISM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	5654	2357	5589	2157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCGTGTGCCACTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	148166834	148163874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_148165062_148166019_148166216_148166727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018763	chr4	-	467	3	ISM	ENSMUSG00000029007.9	ENST00000376627.6	546	4	4226	0	4195	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCGCCCCGGTAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	148168228	148166031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_148166216_148166727_148166834_148168051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018764	chr4	-	269	3	FSM	ENSMUSG00000029007.9	ENST00000510878.1	269	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCGCCCCGGTAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	148172423	148166031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_148166216_148168415_148168451_148172373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018765	chr4	-	185	1	NIC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	6207	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCGCCCCGGTAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	148166216	148166031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_148166000_148166200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018766	chr4	+	328	2	ISM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	-117	4663	-117	-4163	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCCCGGTGCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	148225082	148225490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148225292_148225371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018767	chr4	+	173	2	ISM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	2243	2054	2243	-1554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGTCACCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	148227442	148228099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148227515_148227998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018768	chr4	+	180	2	ISM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	2816	1337	2816	-837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGCCCGACTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	148228015	148228816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148228100_148228720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018769	chr4	+	262	3	ISM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	4082	503	3521	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGTCAGGGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	148228720	148229653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148228816_148229110_148229185_148229560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018770	chr4	+	292	2	ISM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	4359	128	4359	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAGGATGCGAGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	148229558	148230025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148229654_148229828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018771	chr4	+	222	1	Genic_Genomic	ENSMUSG00000029003.12	novel	NA	NA	NA	NA	4737	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAACATGTGTATCGAA	NA	NA	NA	NA	NA	NA	NA	NA	148229936	148230158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_148229900_148230200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018772	chr4	-	1848	6	FSM	ENSMUSG00000055401.15	ENSMUST00000105706.8	1938	6	91	-1	91	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTCATCCTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	148236274	148230171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148235544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018773	chr4	-	473	1	Genic_Genomic	ENSMUSG00000055401.15	novel	NA	NA	NA	NA	5721	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGTTCATCCTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	148230644	148230171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_148230200_148230600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018774	chr4	-	922	5	FSM	ENSMUSG00000029001.16	ENST00000251546.8	933	5	13	-2	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGACCTCATTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	148245094	148237878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_148238102_148240602_148240739_148241065_148241164_148242993_148243270_148244905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018775	chr4	-	816	5	NNC	ENSMUSG00000029001.16	novel	818	5	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGACCTCATTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	148243260	148237878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_148238102_148240602_148240731_148240847_148240948_148241065_148241164_148242993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018776	chr4	-	820	5	FSM	ENSMUSG00000029001.16	ENST00000376768.5	818	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGACCTCATTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	148243260	148237878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241065_148241164_148242993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018777	chr4	-	1631	1	ISM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	8646	0	8646	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	148520582	148518951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_148519000_148520600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018778	chr4	-	2420	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	6	566	6	-566	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGGAGATGATCATACC	NA	NA	NA	NA	NA	NA	NA	NA	148529222	148519517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_148521100_148528384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018779	chr4	+	224	2	ISM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	15	2541	15	-2541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTGGCGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	148533096	148536889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148533145_148536713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018780	chr4	+	249	2	ISM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	5217	322	5217	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGCCATCCGGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	148538298	148539108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148538448_148539008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018781	chr4	+	223	1	NIC	ENSMUSG00000028991.16	novel	8564	58	NA	NA	6126	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGCCTCTGACTATGG	NA	NA	NA	NA	NA	NA	NA	NA	148539207	148539430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_148539200_148539400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018782	chr4	+	763	5	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	0	741	0	-741	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAAGGAGATGAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	148675959	148678335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018783	chr4	+	681	5	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	576	419	576	-419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGTGAGTGGCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	148676535	148678657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018784	chr4	+	935	5	ISM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	977	0	977	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCATTTTTGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	148676936	148679076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018785	chr4	-	1405	1	ISM	ENSMUSG00000041459.16	ENSMUST00000165113.8	6495	7	13210	0	11576	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTAGTAGTCATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	148698243	148696838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_148696800_148698200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018786	chr4	-	553	4	ISM	ENSMUSG00000041459.16	ENST00000456601.1	803	5	3262	0	3258	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTCCATTTTTATCCG	NA	NA	NA	NA	NA	NA	NA	NA	148706561	148702020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_148702093_148703094_148703249_148703640_148703812_148706405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018787	chr4	-	517	3	ISM	ENSMUSG00000041459.16	ENST00000456601.1	803	5	23	1657	19	-1657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTTTTGCCTTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	148709800	148703677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_148703812_148706405_148706570_148709581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018788	chr4	-	255	1	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	139087	0	139087	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	149045246	149044991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149045000_149045200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018789	chr4	-	282	2	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	136341	1072	136341	-1072	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCACCTGCTGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	149047992	149046063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149046252_149047898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018790	chr4	-	291	3	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	132248	2911	132248	-2911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGGTAGGAAAGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	149052085	149047902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149047991_149050678_149050777_149051980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018791	chr4	-	320	3	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	115709	6989	115709	-6989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGATTAATGACTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	149068624	149051980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149052084_149055006_149055093_149068493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018792	chr4	-	271	3	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	58070	10045	58070	-10045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTTGGCTTTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	149126263	149055036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149055093_149068493_149068623_149126177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018793	chr4	+	1227	3	ISM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	3663	165	3663	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATCAAGGGCACATCAT	NA	NA	NA	NA	NA	NA	NA	NA	149192265	149203162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_149192369_149201864_149202055_149202228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018794	chr4	+	1052	1	NIC	ENSMUSG00000028974.14	novel	2457	6	NA	NA	13692	19	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGGGTGGGGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	149202294	149203346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_149202300_149203300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018795	chr4	-	959	4	ISM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	5245	-1	5185	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTCTGCTTGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	149216841	149212653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018796	chr4	-	732	1	NIC	ENSMUSG00000073705.11	novel	1110	5	NA	NA	8640	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGTCTGCTTGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	149213386	149212654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_149212700_149213400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018797	chr4	-	751	1	Genic_Genomic	ENSMUSG00000028961.16	novel	NA	NA	NA	NA	15967	1	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTTTGTTTCTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	149235197	149234446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_149234400_149235200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018798	chr4	-	1211	5	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	12410	51	12410	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAGCATCCGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	149238754	149234498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018799	chr4	-	735	6	ISM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	8691	861	8691	-861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTGGGGCGGGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	149242473	149235308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018800	chr4	-	1022	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	95658	116	95658	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATCCTATGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	149414784	149413309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149414195_149414647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018801	chr4	-	182	1	ISM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	97277	875	96513	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCCCTCACCCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	149413929	149413747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149413700_149413900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018802	chr4	-	188	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	94549	1527	94549	-972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGCATCTGCTCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	149415893	149414720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149414795_149415779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018803	chr4	-	275	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	90760	2600	90760	-2045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACGAGTTCAGAGGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	149419682	149415793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149415955_149419568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018804	chr4	-	264	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	88465	6439	88465	-5884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACAGATATTTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	149421977	149419632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149419761_149421841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018805	chr4	-	272	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	82971	8647	82971	-8092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGAAACTGGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	149427471	149421840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149421977_149427335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018806	chr4	-	187	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	81392	14179	81392	-13624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGAAGAACAAAGAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	149429050	149427372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149427481_149428971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018807	chr4	-	303	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	77883	15778	77883	-15223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATTGGGGCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	149432559	149428971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149429099_149432383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018808	chr4	+	163	1	NIC	ENSMUSG00000085819.8	novel	1286	4	NA	NA	92	-11167	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAGAAAACACATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	149432462	149432625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_149432500_149432600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018809	chr4	-	226	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	75233	19295	75233	-18740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCCTTCTGTCCAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	149435209	149432488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149432620_149435114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018810	chr4	-	222	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	74405	21921	74405	-21366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTTCCCGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	149436037	149435114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149435214_149435914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018811	chr4	-	235	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	72955	22717	72955	-22162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTTTGCCGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	149437487	149435910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149436043_149437384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018812	chr4	-	239	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	70429	24191	70429	-23636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTACAGTTGATTGACA	NA	NA	NA	NA	NA	NA	NA	NA	149440013	149437384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149437485_149439874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018813	chr4	-	299	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	68186	26696	68186	-26141	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCGAGCTCAATAGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	149442256	149439889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149440014_149442081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018814	chr4	-	331	3	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	65613	28965	65613	-28410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGATCACTCTCCCGAATG	NA	NA	NA	NA	NA	NA	NA	NA	149444829	149442158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149442281_149443653_149443768_149444734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018815	chr4	-	215	2	ISM	ENSMUSG00000028960.21	ENST00000253251.12	4741	27	66165	30986	65408	-30986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTGTTGAGAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	149445034	149444734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149444828_149444912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018816	chr4	-	181	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	64644	31717	64644	-31162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGTGCGCAGCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	149445798	149444910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149445034_149445740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018817	chr4	-	184	3	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	57645	32544	57645	-31989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCCACCGGGTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	149452797	149445737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149445798_149449910_149449995_149452757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018818	chr4	-	220	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	54726	39560	54726	-39005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGCTTTTAGCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	149455716	149452753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149452873_149455615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018819	chr4	-	238	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	53023	42420	53023	-41865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGGACGACACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	149457419	149455613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149455717_149457284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018820	chr4	-	319	2	ISM	ENSMUSG00000028960.21	ENST00000253251.12	4741	27	45383	43536	44626	-43536	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCGGAGCTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	149465816	149457284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149457427_149465639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018821	chr4	-	319	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	42101	52503	42101	-51948	internal_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAACAAGCCCCATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	149468341	149465696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149465869_149468194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018822	chr4	-	223	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	40769	55015	40769	-54460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCAAAAGAAGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	149469673	149468208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149468340_149469581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018823	chr4	-	394	3	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	27218	56387	27218	-55832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGATGGCAAAGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	149483224	149469580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149469670_149471537_149471674_149483055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018824	chr4	-	294	2	ISM	ENSMUSG00000028960.21	ENSMUST00000239095.2	5081	30	-39	69898	-39	-69343	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACCCCAGCTACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	149510481	149483091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149483243_149510338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018825	chr4	+	608	1	FSM	ENSMUSG00000070572.8	ENSMUST00000117987.2	378	1	-38	-192	-38	192	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGCTACTTCCTAACCT	NA	NA	NA	NA	NA	NA	NA	NA	149541747	149542355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_149541700_149542400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018826	chr4	-	1914	1	Genic_Genomic	ENSMUSG00000028992.14	novel	NA	NA	NA	NA	15688	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACGACTACCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	149553941	149552027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_149552000_149553900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018827	chr4	-	1901	3	ISM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	10656	613	10626	374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCAGCTCTCAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	149559003	149552641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149554240_149557741_149557926_149558884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018828	chr4	-	294	3	ISM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	20	4854	-6	-4814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCTCATCCCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	149569635	149557869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149557926_149558884_149559053_149569565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018829	chr4	+	1775	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	149569792	149581125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018830	chr4	+	2554	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	1	119	1	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTTCTCGGCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	149602693	149650775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018831	chr4	+	2146	3	NNC	ENSMUSG00000028988.14	novel	634	4	NA	NA	680	-207	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTAAAGTCCGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	149630253	149650687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_149630289_149630858_149630950_149648667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018832	chr4	+	2167	1	Genic_Genomic	ENSMUSG00000028988.14	novel	NA	NA	NA	NA	19155	1	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGAGCTGAGCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	149648728	149650895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_149648700_149650900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018833	chr4	-	425	1	Genic_Genomic	ENSMUSG00000028982.10	novel	NA	NA	NA	NA	29822	5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCCTGCATTTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	149828912	149828487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_149828500_149828900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018834	chr4	-	673	2	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	24948	510	24948	-510	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTTCTTTTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	149833786	149829002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149829395_149833505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018835	chr4	-	433	2	ISM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	3	18353	3	-18353	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTCCTACAGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	149858731	149846845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149847004_149858456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018836	chr4	-	556	1	ISM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	58205	0	10451	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCGAGTCCTTTCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	149981295	149980739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149980700_149981300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018837	chr4	-	753	2	FSM	ENSMUSG00000039911.14	ENSMUST00000105684.2	1002	2	418	-169	418	-78	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCCCAACACTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	149991328	149982501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_149982799_149990872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018838	chr4	-	583	2	ISM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	123	10460	123	-8529	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCACTCCGTTGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	150039377	149991199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_149991715_150039309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018839	chr4	-	3032	1	ISM	ENSMUSG00000028980.15	ENSMUST00000084117.13	4571	5	20624	0	20624	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAGTTGATAAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	150066963	150063931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_150063900_150067000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018840	chr4	-	3070	2	ISM	ENSMUSG00000028980.15	ENSMUST00000084117.13	4571	5	19133	472	19133	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGGCTCTGTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	150068454	150064403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_150067379_150068359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018841	chr4	+	1248	8	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	12	2115	12	-2109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGGTATCTGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	150321420	150331221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018842	chr4	+	1055	8	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	2545	1224	2545	-1218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCCTAGGGAAGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	150323953	150332112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018843	chr4	+	1891	8	FSM	ENSMUSG00000063524.14	ENSMUST00000080149.6	1902	8	18	-7	18	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCATCTCATTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	150327960	150333337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018844	chr4	+	950	3	FSM	ENSMUSG00000028967.11	ENST00000469499.5	948	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTATACCTCCTAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	150939629	150951428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_150939729_150949531_150949727_150950772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018845	chr4	+	1115	3	ISM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	10001	1730	9900	187	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAGCTTCGCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	150949530	150951614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_150949727_150949820_150949898_150950772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018846	chr4	+	661	1	NIC	ENSMUSG00000028967.11	novel	3036	4	NA	NA	11137	1	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTATACCTCCTAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	150950767	150951428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_150950800_150951400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018847	chr4	+	888	1	Genic_Genomic	ENSMUSG00000028967.11	novel	NA	NA	NA	NA	12832	1	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTGTCTAAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	150952462	150953350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_150952500_150953400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018848	chr4	-	856	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	52	0	52	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	150994331	150981589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018849	chr4	-	258	3	ISM	ENSMUSG00000028964.15	ENST00000377493.9	353	4	1271	0	1271	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGAGTATATCCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	150991599	150985466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_150985552_150988271_150988342_150991496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018850	chr4	-	217	3	ISM	ENSMUSG00000028964.15	ENST00000377493.9	353	4	55	2801	55	-2801	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGCGGGTGTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	150992815	150988267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_150988342_150991496_150991599_150992774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018851	chr4	-	605	1	Genic_Genomic	ENSMUSG00000028955.4	novel	NA	NA	NA	NA	10050	1	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGTGTTTCTTGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	151132360	151131755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_151131800_151132400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018852	chr4	-	803	3	ISM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	6876	1157	6876	-1157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGACTATGTTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	151135534	151132913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_151133504_151134451_151134504_151135373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018853	chr4	-	2182	1	ISM	ENSMUSG00000014592.22	ENSMUST00000097774.9	8533	23	800170	0	46870	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATCTGTGTTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	151146163	151143981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_151144000_151146200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018854	chr4	+	1709	3	ISM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	45752	0	45752	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGGCTATGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	152063899	152066594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_152064044_152064374_152064505_152065159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018855	chr4	+	1704	3	NNC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	45752	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCAGTCTGGCTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	152063899	152066591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_152064044_152064374_152064503_152065159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018856	chr4	-	1016	3	ISM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	3130	-1	3089	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTGTCACTCGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	152070324	152067094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152067810_152068091_152068194_152070125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018857	chr4	-	719	1	Genic_Genomic	ENSMUSG00000039759.11	novel	NA	NA	NA	NA	5600	1	mono-exon	FALSE	NA	NA	NA	NA	NA	359	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGCTGTCACTCGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	152067813	152067094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_152067100_152067800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018858	chr4	-	432	3	FSM	ENSMUSG00000039759.11	ENST00000401022.2	432	3	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCCGCCTGAGAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	152073411	152067593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_152067800_152068091_152068231_152073324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018859	chr4	-	563	3	ISM	ENSMUSG00000039759.11	ENST00000307896.10	667	4	3126	-1	3088	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCCGCCTGAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	152070325	152067594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152067810_152068091_152068222_152070107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018860	chr4	-	268	2	NNC	ENSMUSG00000039759.11	novel	667	4	NA	NA	5259	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGCCGCCTGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	152068154	152067595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_152067810_152068100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018861	chr4	-	453	3	ISM	ENSMUSG00000039759.11	ENST00000307896.10	667	4	0	496	0	-496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACCCTGGGTACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	152073451	152068091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152068222_152070107_152070319_152073339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018862	chr4	-	314	2	NNC	ENSMUSG00000039759.11	novel	432	3	NA	NA	3098	-516	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAAGGCCCCGTGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	152070315	152068111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_152068231_152070120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018863	chr4	-	294	1	ISM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	6332	0	6332	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGTGCCTCCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	152074383	152074089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152074100_152074400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018864	chr4	-	502	2	ISM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	3908	1926	3908	-1926	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATCTGGAGCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	152076807	152076015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152076237_152076526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018865	chr4	-	320	2	ISM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	2170	2739	2170	-2739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGCGACATACCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	152078545	152076828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152077050_152078446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018866	chr4	-	323	2	ISM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	185	4384	185	-4384	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGCTACATCCCCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	152080530	152078473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152078549_152080282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018867	chr4	+	133	3	ISM	ENSMUSG00000073700.4	ENSMUST00000097773.4	3986	4	3877	2312	3877	-2312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTCTATGTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	152097136	152099825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_152097163_152098763_152098837_152099791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018868	chr4	-	328	1	ISM	ENSMUSG00000028950.4	ENSMUST00000030792.2	2863	6	10175	152	10003	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCTGGGGCTGTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	152112850	152112522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152112500_152112800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018869	chr4	-	607	3	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	6862	660	6862	-660	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGGAAGCCCACGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	152115991	152113182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152113455_152115240_152115362_152115777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018870	chr4	-	489	2	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	3513	3253	3513	-3253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGACAAGGTCGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	152119340	152115775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152115991_152119066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018871	chr4	-	511	2	ISM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	0	6544	0	-6544	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGAGCCGCGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	152122853	152119066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152119374_152122649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018872	chr4	+	1012	2	ISM	ENSMUSG00000039713.18	ENSMUST00000105661.10	3842	21	17399	0	17399	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	152198574	152199847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_152199026_152199286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018873	chr4	+	1313	7	FSM	ENSMUSG00000024793.15	ENST00000377782.7	1335	7	21	1	21	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGGCTGCCTCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	152201085	152204417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_152201181_152201387_152201523_152201834_152202017_152202096_152202152_152202682_152202808_152203529_152203801_152203967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018874	chr4	-	374	1	ISM	ENSMUSG00000028943.19	ENSMUST00000030785.15	3406	16	31437	66	8155	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTGTACCTGCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	152205227	152204853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152204900_152205200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018875	chr4	-	676	3	ISM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	23991	551	583	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTGGAGTGCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	152212799	152205404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152205723_152208166_152208251_152212525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018876	chr4	-	440	3	ISM	ENSMUSG00000028943.19	ENSMUST00000105653.8	1411	8	3307	2899	367	510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTGCCTGCCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	152213015	152208225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152208251_152212525_152212790_152212864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018877	chr4	-	494	2	ISM	ENSMUSG00000028943.19	ENSMUST00000105653.8	1411	8	749	7538	749	-4129	intron_retention	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCACTGGCCGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	152215573	152212864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152213011_152215225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018878	chr4	-	630	2	ISM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	17892	10465	1841	-6583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCCTGAGTTCGCCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	152218898	152215318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152215668_152218617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018879	chr4	-	496	2	ISM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	16651	13763	600	-9881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAGAAAGCTTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	152220139	152218616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152218899_152219925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018880	chr4	-	523	3	ISM	ENSMUSG00000028943.19	ENSMUST00000207676.2	4618	12	13303	11189	-2594	-11189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGGAAGGAGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	152223376	152219924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152220132_152222886_152223019_152223192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018881	chr4	-	567	3	ISM	ENSMUSG00000028943.19	ENSMUST00000207676.2	4618	12	3167	14457	3152	-14457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGGCGGCCCGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	152233512	152223192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152223376_152223495_152223683_152233315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018882	chr4	-	530	2	ISM	ENSMUSG00000028943.19	ENSMUST00000207676.2	4618	12	-29	24582	-29	-24582	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAAGGACTTTCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	152236708	152233317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_152233510_152236370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018883	chr4	+	521	3	ISM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	9	53960	9	-53952	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACTCCCAGGTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	152270599	152302352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_152270843_152291220_152291339_152302192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018884	chr4	+	981	6	ISM	ENSMUSG00000028937.15	ENSMUST00000105652.3	1393	9	23259	-9	23259	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGGTGGTCATTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	152307525	152356313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018885	chr4	+	4561	4	ISM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	1474	0	1474	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTCCTGTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	152383157	152391578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_152383231_152384127_152384298_152384993_152385212_152387478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018886	chr4	+	2065	4	NNC	ENSMUSG00000028936.16	novel	2051	4	NA	NA	-1	2	intron_retention	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGCAAGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	152410308	152418530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_152410350_152411937_152412043_152414460_152414586_152416736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018887	chr4	+	2065	4	FSM	ENSMUSG00000028936.16	ENSMUST00000139685.8	2051	4	-14	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTGCAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152410309	152418528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018888	chr4	+	477	4	NNC	ENSMUSG00000028936.16	novel	474	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	152410310	152416937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_152410357_152411937_152412043_152414460_152414586_152416736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018889	chr4	+	898	4	FSM	ENSMUSG00000028936.16	ENST00000234875.9	898	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTTTTTTTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	152411936	152418538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_152412043_152414460_152414586_152416736_152416967_152418101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018890	chr4	+	2002	3	NNC	ENSMUSG00000028936.16	novel	2051	4	NA	NA	19	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTGCAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152411955	152418528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_152412047_152414466_152414586_152416736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018891	chr4	-	1377	3	FSM	ENSMUSG00000086272.2	ENSMUST00000141582.2	1371	3	2	-8	2	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGGGTTTGAAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	154034958	154032081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_154033295_154034549_154034644_154034888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018892	chr4	+	1098	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154041693	154046382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018893	chr4	+	438	1	NIC	ENSMUSG00000047613.11	novel	1098	4	NA	NA	4251	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154045944	154046382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_154045900_154046400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018894	chr4	+	250	2	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	43	11423	43	-11423	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGTACCACCATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	154226871	154229850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_154226971_154229699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018895	chr4	+	271	2	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	2870	10209	2870	-10209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTGGCCAAACGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	154229698	154231064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_154229853_154230947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018896	chr4	+	224	2	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	9965	4120	9965	-4120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAAGTGGCTCAGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	154236793	154237153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_154236882_154237017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018897	chr4	+	343	4	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	10221	1520	10221	-1520	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAACCCGAGGATGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154237049	154239753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_154237153_154237249_154237328_154238991_154239098_154239697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018898	chr4	+	423	3	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	12163	525	12163	-525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCGTAAGCCAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	154238991	154240748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_154239098_154239697_154239824_154240557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018899	chr4	+	438	2	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	13728	40	13728	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGTATAAAGTTATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	154240556	154241233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_154240750_154240988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018900	chr4	+	274	1	ISM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	14171	0	14171	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACAGTGGTGGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	154240999	154241273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_154241000_154241300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018901	chr4	-	806	1	Genic_Genomic	ENSMUSG00000029030.15	novel	NA	NA	NA	NA	2343	1	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGCTCCTTTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	154242746	154241940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_154241900_154242700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018902	chr4	-	1087	3	ISM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	405	325	371	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGTGGTGGGTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	154244718	154242266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_154243023_154243725_154243880_154244541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018903	chr4	+	1951	4	ISM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	17	6360	17	-6360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGCATTCTGCGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	154923281	154943876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018904	chr4	-	663	5	ISM	ENSMUSG00000029059.10	ENST00000378427.6	865	6	501	-3	501	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCAAGGAGGTCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	154982638	154979575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_154979958_154981496_154981584_154981805_154981882_154981962_154982027_154982584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018905	chr4	-	392	1	Genic_Genomic	ENSMUSG00000029059.10	novel	NA	NA	NA	NA	3172	3	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCAAGGAGGTCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	154979967	154979575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_154979600_154980000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018906	chr4	-	665	4	ISM	ENSMUSG00000029059.10	ENST00000444521.6	956	6	1087	-1	1087	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCAAGGAGGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	154982052	154979577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_154979958_154981496_154981616_154981805_154981882_154981962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018907	chr4	-	472	2	NNC	ENSMUSG00000029059.10	novel	956	6	NA	NA	1548	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCTGTAGACCAGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	154981591	154979586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_154979964_154981496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018908	chr4	-	477	5	NNC	ENSMUSG00000029059.10	novel	956	6	NA	NA	95	-650	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCCAGGTGAGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	154983044	154981505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_-_154981616_154981805_154981882_154981958_154982086_154982584_154982637_154982932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018909	chr4	-	1584	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	13	-1	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCGTCTACACGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	155170817	155158565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018910	chr4	-	731	1	NIC	ENSMUSG00000029048.4	novel	1596	7	NA	NA	11338	3	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTAAGGAAAGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	155159489	155158758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_155158800_155159500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018911	chr4	-	895	5	ISM	ENSMUSG00000029048.4	ENST00000378513.7	1298	6	3614	239	3614	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACAGAGCTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	155167213	155159000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155159486_155160045_155160182_155161168_155161248_155165255_155165361_155167123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018912	chr4	+	1055	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	21	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTCCTTCATAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	155334443	155341144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018913	chr4	+	1449	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	30	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	155334489	155341141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155335108_155335212_155335494_155340591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018914	chr4	+	1545	1	Genic_Genomic	ENSMUSG00000078490.11	novel	NA	NA	NA	NA	11192	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTCTGTTGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	155504906	155506451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_155504900_155506500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018915	chr4	+	319	4	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	6249	16123	6249	-16123	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTGAAGGGAATGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	155618158	155627601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155618193_155619814_155619922_155625012_155625077_155627487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018916	chr4	+	433	3	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	15576	5749	15576	-5749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTTTAAATTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	155627485	155637975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155627651_155636111_155636179_155637774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018917	chr4	+	422	2	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	25864	4034	25864	-4034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCCACATGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	155637773	155639690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155637977_155639471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018918	chr4	+	2000	3	ISM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	63645	132	27562	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGTACCCTTTTCACC	NA	NA	NA	NA	NA	NA	NA	NA	155639471	155643594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155639689_155641627_155641744_155641927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018919	chr4	+	309	2	NNC	ENSMUSG00000029064.16	novel	3018	10	NA	NA	27590	-1981	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGGGCAGTCCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	155639499	155641743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_155639693_155641627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018920	chr4	+	632	3	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	27637	1426	27637	-1426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGCCTTTTTACTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	155639546	155642298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155639689_155641627_155641744_155641924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018921	chr4	+	1685	1	ISM	ENSMUSG00000029064.16	ENST00000615252.4	3018	10	66247	1	30132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	155642041	155643726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155642000_155643700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018922	chr4	+	430	2	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	51	13808	51	-13804	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTAGGACCAGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155648207	155661650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155648437_155661449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018923	chr4	+	254	2	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	213	-13811	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGTTCAGGTAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	155648369	155661643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_155648437_155661456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018924	chr4	+	421	3	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	13292	6734	-5503	-6730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCAAGCAGGATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	155661448	155668724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155661655_155663767_155663852_155668593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018925	chr4	+	326	3	ISM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	15608	5741	-3187	-5737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTGAGCCCCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	155663764	155669717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155663852_155668593_155668724_155669608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018926	chr4	+	366	4	ISM	ENSMUSG00000029063.17	ENSMUST00000105612.2	2737	10	1672	4202	1672	-4198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCAATCCCAAGTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	155668623	155671256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155668724_155669608_155669718_155669820_155669907_155671185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018927	chr4	+	305	3	ISM	ENSMUSG00000029063.17	ENSMUST00000105612.2	2737	10	2897	3501	2897	-3497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAAGTTCCCAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	155669848	155671957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155669907_155671185_155671289_155671813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018928	chr4	+	316	3	ISM	ENSMUSG00000029063.17	ENSMUST00000105612.2	2737	10	4262	3216	4262	-3212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCATGTTGCAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	155671213	155672242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155671289_155671813_155671954_155672141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018929	chr4	+	963	4	ISM	ENSMUSG00000029063.17	ENSMUST00000105612.2	2737	10	5186	1056	5186	-1052	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGTGTTTCTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	155672137	155674402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155672242_155672317_155672476_155673066_155673150_155673784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018930	chr4	+	259	2	NNC	ENSMUSG00000029063.17	novel	2737	10	NA	NA	6148	-1455	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTTCTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	155673099	155673999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr4_+_155673150_155673790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018931	chr4	+	883	1	Genic_Genomic	ENSMUSG00000029063.17	novel	NA	NA	NA	NA	7625	1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTAACAGCTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	155674576	155675459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_155674600_155675500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018932	chr4	+	656	4	FSM	ENSMUSG00000042202.16	ENST00000246421.4	657	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGAACATTAGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	155694532	155702219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155694777_155694957_155695094_155696072_155696201_155702071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018933	chr4	+	116	2	ISM	ENSMUSG00000029062.15	ENST00000340677.9	2420	20	3246	19527	3246	-19527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGCTCGAAGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	155713232	155714718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155713281_155714650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018934	chr4	+	270	3	ISM	ENSMUSG00000029062.15	ENST00000340677.9	2420	20	8612	10132	8612	-10132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAAAACCAGCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	155718598	155724113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155718683_155722976_155723100_155724050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018935	chr4	+	263	2	ISM	ENSMUSG00000029062.15	ENST00000340677.9	2420	20	14062	9847	14062	-9847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGCTGTAATGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	155724048	155724398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155724147_155724233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018936	chr4	+	247	2	ISM	ENSMUSG00000029062.15	ENST00000340677.9	2420	20	15213	8097	15213	-8097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATCTTTCCCATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	155725199	155726148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155725270_155725971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018937	chr4	+	143	2	ISM	ENSMUSG00000029062.15	ENST00000340677.9	2420	20	23189	749	23189	-749	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGGCTATAATGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	155733175	155733496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155733291_155733468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018938	chr4	+	287	2	ISM	ENSMUSG00000029062.15	ENST00000340677.9	2420	20	23892	0	23892	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGATGGACGTGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	155733878	155734245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155734069_155734148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018939	chr4	-	129	1	ISM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	14320	68	6475	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACACGCCGTGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	155739335	155739206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155739200_155739300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018940	chr4	-	764	5	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	5189	3	5189	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACTCCACACGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	155740621	155739212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018941	chr4	-	163	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	5735	352	5735	-352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTAGGGTGGGGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	155740075	155739561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155739628_155739978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018942	chr4	-	838	5	ISM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	4594	503	4594	-503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGAGTTCGGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155741216	155739712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018943	chr4	-	225	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	4308	1962	4308	-1962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATGTCACTGCTACCAATA	NA	NA	NA	NA	NA	NA	NA	NA	155741502	155741171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155741264_155741369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018944	chr4	-	144	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	4081	2280	4081	-2280	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGCAGTGGATGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	155741729	155741489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155741527_155741622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018945	chr4	-	152	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	3642	2732	3642	-2732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGACCCAGAGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	155742168	155741941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155741980_155742054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018946	chr4	-	133	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	3422	2952	3422	-2952	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTTGGCGGTCAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	155742388	155742161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155742218_155742311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018947	chr4	-	216	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	2350	3101	2350	-3101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTAATGTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	155743460	155742310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155742417_155743350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018948	chr4	-	172	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	2131	4177	2131	-4177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGCTGGACCTTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	155743679	155743386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155743459_155743579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018949	chr4	-	221	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	1571	4397	1571	-4397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCTGGAACCCTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	155744239	155743606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155743723_155744134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018950	chr4	-	149	2	ISM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	149	6219	149	-6219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATGCGTTGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	155745661	155745428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155745479_155745562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018951	chr4	+	1083	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	1061	-4	1061	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTTGTGTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	155779859	155780942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155779900_155780900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018952	chr4	+	1474	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAATTGCCACAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	155789255	155818337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018953	chr4	+	403	2	ISM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	26190	0	26190	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACCAAATGCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	155815781	155816646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155815922_155816383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018954	chr4	+	265	1	NIC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	26790	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACCAAATGCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	155816381	155816646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_155816400_155816600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018955	chr4	-	990	3	ISM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	13612	-1	13612	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTGATGGCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	155831938	155825096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155825810_155830485_155830595_155831770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018956	chr4	+	491	1	ISM	ENSMUSG00000054514.4	ENSMUST00000067628.2	971	2	578	0	549	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTATTAGTCGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	155846226	155846717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155846200_155846700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018957	chr4	-	438	1	NIC	ENSMUSG00000042116.4	novel	3623	4	NA	NA	2042	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCGCGCGGACCCGT	NA	NA	NA	NA	NA	NA	NA	NA	155855287	155854849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_-_155854800_155855300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018958	chr4	-	559	2	FSM	ENSMUSG00000042116.4	ENST00000338660.5	794	2	11	224	11	-224	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGCGTAAGCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	155857318	155855074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_155855481_155857165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018959	chr4	+	764	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	155887977	155893288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018960	chr4	+	176	1	ISM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	5103	32	4972	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTATAAATAAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	155893080	155893256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155893100_155893300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018961	chr4	+	384	2	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	12	11301	12	-11301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGCTTCTTTCTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	155896957	155897699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155897267_155897624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018962	chr4	+	384	4	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	979	4118	979	-4118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTAAGTATGTGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	155897924	155904882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155898026_155899699_155899821_155902379_155902445_155904785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018963	chr4	+	384	4	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	7851	2684	7851	-2684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCGCCAAACGGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	155904796	155906316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155904886_155905240_155905346_155905429_155905572_155906268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018964	chr4	+	452	2	ISM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	9515	843	9515	-843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATCCCTGGTGGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	155906460	155908157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155906555_155907799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018965	chr4	+	386	1	Genic_Genomic	ENSMUSG00000029068.17	novel	NA	NA	NA	NA	11670	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTCTGTGCCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	155908615	155909001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_155908600_155909000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018966	chr4	+	580	3	ISM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	132	540	132	-441	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGTTCTACGAATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	155915939	155917047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155916193_155916439_155916528_155916808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018967	chr4	+	1029	3	FSM	ENSMUSG00000065990.13	ENSMUST00000105592.8	1029	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTAGGCCGACCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	155916115	155917518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155916528_155916808_155917255_155917347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018968	chr4	+	873	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	0	-100	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAACCCAGGGCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	155916125	155917588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018969	chr4	+	245	1	Genic_Genomic	ENSMUSG00000065990.13	novel	NA	NA	NA	NA	1218	1	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAACCCAGGGCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	155917343	155917588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_+_155917300_155917600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018970	chr4	+	1121	6	FSM	ENSMUSG00000029070.10	ENST00000342753.8	1137	6	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGATCTGGATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	155924147	155927577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_155924352_155925882_155926004_155926118_155926590_155927013_155927200_155927361_155927439_155927515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018971	chr4	-	817	1	Genic_Genomic	ENSMUSG00000029073.10	novel	NA	NA	NA	NA	3904	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATCCATGTGTACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	155949993	155949176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_155949200_155950000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018972	chr4	-	916	2	ISM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	2099	1476	2099	-1476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCGTCCTCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	155951798	155950655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_155951343_155951569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018973	chr4	+	1090	8	ISM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	1566	29	1566	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGACTTACCAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	155971119	155972967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018974	chr4	+	832	2	ISM	ENSMUSG00000029033.17	ENST00000354700.10	3494	21	9048	514	9048	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCCAGGTCTTCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	155990069	155990995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155990176_155990269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018975	chr4	+	481	1	ISM	ENSMUSG00000029033.17	ENSMUST00000105584.10	4365	24	14751	197	10008	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCCATGGACAGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	155991029	155991510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_155991000_155991500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018976	chr4	+	748	3	ISM	ENSMUSG00000023286.17	ENSMUST00000105581.5	1391	8	11325	42	11325	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGATTTGGTCACTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	156039939	156042126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156040018_156040824_156040906_156041537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018977	chr4	+	2493	1	ISM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	13281	0	12954	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGCCTTGTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	156041568	156044061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156041600_156044100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018978	chr4	+	488	2	ISM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	49	1970	49	-1970	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCCCTGAGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	156046823	156049116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156047195_156048999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018979	chr4	-	369	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	2817	-2	2817	2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGGATTCTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	156074289	156073920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_156073900_156074300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018980	chr4	+	612	3	ISM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	36	13691	-3	-6180	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTCTCCTGTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	156077364	156080976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156077464_156077609_156077792_156080645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018981	chr4	+	801	3	ISM	ENSMUSG00000029076.15	ENSMUST00000097734.11	973	5	-168	3164	91	-3164	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGGGGCCAATTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	156077458	156083992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156077792_156080645_156080976_156083854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018982	chr4	+	731	4	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	23	1542	23	-1263	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTTTCCGCACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	156080656	156093404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018983	chr4	+	1022	5	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	3222	279	3222	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	156083855	156094667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018984	chr4	+	879	4	ISM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	12610	0	12610	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCACAGCCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	156093243	156094946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156093403_156093600_156093777_156094230_156094492_156094663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018985	chr4	+	549	1	NIC	ENSMUSG00000029076.15	novel	5177	7	NA	NA	13594	1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCTTGGGATGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	156094227	156094776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr4_+_156094200_156094800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018986	chr4	+	353	1	ISM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	20347	0	17081	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTGCACGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	156097714	156098067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156097700_156098100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018987	chr4	-	373	1	Genic_Genomic	ENSMUSG00000087381.9	novel	NA	NA	NA	NA	-2844	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGCTTCAGGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	156111125	156110752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr4_-_156110800_156111100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018988	chr4	-	388	3	ISM	ENSMUSG00000087381.9	ENSMUST00000126009.2	810	4	1125	358	1125	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGACTCAAAGATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	156114954	156111111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156111344_156112931_156113012_156114878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018989	chr4	-	620	5	ISM	ENSMUSG00000029074.15	ENST00000379290.6	1227	10	3602	-1	3602	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACGGACTTGTGGCCGCGC	NA	NA	NA	NA	NA	NA	NA	NA	156128254	156119812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156119909_156120202_156120297_156120593_156120711_156127503_156127645_156128082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018990	chr4	-	758	5	ISM	ENSMUSG00000029074.15	ENST00000379290.6	1227	10	1924	777	1924	-777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTGGGGAGAGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	156129932	156120590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156120711_156127503_156127645_156128082_156128255_156129173_156129348_156129781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018991	chr4	-	622	4	ISM	ENSMUSG00000029074.15	ENSMUST00000051509.15	2304	15	5355	8208	1937	-7691	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGTCGAGCTCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	156129919	156127504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156127645_156128082_156128255_156129175_156129348_156129781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018992	chr4	-	730	5	ISM	ENSMUSG00000029074.15	ENST00000379290.6	1227	10	194	8269	194	-8269	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACCCCTTATAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	156131662	156128082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156128255_156129173_156129348_156129781_156129933_156131353_156131468_156131543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018993	chr4	+	1285	1	ISM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	15999	0	15982	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	156210437	156211722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_+_156210400_156211700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018994	chr4	+	1849	1	FSM	ENSMUSG00000078349.4	ENSMUST00000105140.3	1848	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTGAAAGGTGATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	156287760	156289609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_+_156287800_156289600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018995	chr4	-	1312	8	FSM	ENSMUSG00002076083.1	ENST00000622660.1	1313	8	2	-1	2	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTACGGGGTGGCCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	156317261	156314442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr4_-_156314720_156314961_156315144_156315370_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018996	chr4	-	977	4	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6237	555	6237	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGATCCGGCAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	156333581	156332187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156332427_156332544_156332656_156332793_156332916_156333076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018997	chr4	-	638	3	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	6083	1232	6083	-677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAAGTGGACTGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	156333735	156332864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156332916_156333076_156333580_156333651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018998	chr4	-	957	5	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	3289	1475	3289	-920	internal_fragment	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGGGCAGTGAGCCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	156336529	156333107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156333580_156333651_156333731_156333841_156333958_156334794_156334958_156336402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000018999	chr4	-	505	4	ISM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	3046	2207	3046	-1652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGTCGGGTATGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	156336772	156333839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr4_-_156333958_156334794_156334958_156336402_156336538_156336683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019000	chr5	+	560	1	FSM	ENSMUSG00000062353.7	ENSMUST00000118533.2	438	1	-41	-81	-41	81	mono-exon	FALSE	NA	NA	NA	NA	NA	5607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTATTATTAAGAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	3286389	3286949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_3286400_3286900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019001	chr5	+	321	3	ISM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	171	93167	171	-93167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCGCAGAACATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	3394482	3479058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_3394600_3440680_3440817_3478990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019002	chr5	+	301	1	ISM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	186815	0	186396	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGATTTCAGACTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	3580707	3581008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_3580700_3581000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019003	chr5	-	419	1	ISM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	7555	0	7427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTATTTTGGATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	3690379	3689960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_3690000_3690400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019004	chr5	-	632	3	ISM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	2994	1232	2866	97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGTTGGCTTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	3694940	3691192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_3691581_3693557_3693742_3694880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019005	chr5	-	571	3	ISM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	43	1803	43	-1803	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTCTGGAGTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	3697763	3694879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_3694941_3696783_3696910_3697379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019006	chr5	-	1346	1	ISM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	111164	416	111164	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTTTTGTCTCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	3741761	3740415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_3740400_3741800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019007	chr5	-	1376	2	ISM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	109077	1835	109023	-1835	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACCACAGTGAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	3743902	3742251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_3743497_3743771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019008	chr5	-	1377	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	3943934	3940580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_3941898_3943874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019009	chr5	-	1318	1	NIC	ENSMUSG00000040429.7	novel	1376	2	NA	NA	2009	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	3941898	3940580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_3940600_3941900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019010	chr5	+	909	2	ISM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	118059	30856	118059	-30856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATCAATCAACTTACTAA	NA	NA	NA	NA	NA	NA	NA	NA	4096332	4100454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_4096942_4100154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019011	chr5	+	863	1	Genic_Genomic	ENSMUSG00000040407.19	novel	NA	NA	NA	NA	152183	9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCTTCAAACTTTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	4130456	4131319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_4130500_4131300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019012	chr5	-	2573	4	ISM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	12759	-6	12759	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTGCCAATGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	4141987	4131138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019013	chr5	-	2166	1	Genic_Genomic	ENSMUSG00000001467.6	novel	NA	NA	NA	NA	21442	6	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTGCCAATGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	4133304	4131138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_4131100_4133300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019014	chr5	+	741	1	Genic_Genomic	ENSMUSG00000053178.6	novel	NA	NA	NA	NA	4545	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	4246911	4247652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_4246900_4247700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019015	chr5	-	783	1	FSM	ENSMUSG00000044674.7	ENSMUST00000054294.7	4197	1	3414	0	3414	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTGTGCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	4804621	4803838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_4803800_4804600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019016	chr5	-	206	1	ISM	ENSMUSG00000046798.15	ENSMUST00000179804.8	3752	5	9475	94	9416	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5555314	5555108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5555100_5555300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019017	chr5	-	465	4	ISM	ENSMUSG00000040473.16	ENST00000497910.5	2292	19	68679	0	68679	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCATATGCTGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	5639171	5634650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5634849_5636355_5636433_5637140_5637279_5639119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019018	chr5	-	418	4	ISM	ENSMUSG00000040473.16	ENSMUST00000135252.3	2188	16	50441	134	44059	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAGCAGTAAGTAATATC	NA	NA	NA	NA	NA	NA	NA	NA	5663791	5643779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5643854_5645920_5646040_5654273_5654393_5663685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019019	chr5	-	384	2	ISM	ENSMUSG00000040473.16	ENSMUST00000135252.3	2188	16	46845	20040	40463	-20040	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTGCATGGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5667387	5663685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5663851_5667168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019020	chr5	-	422	4	ISM	ENSMUSG00000040473.16	ENSMUST00000135252.3	2188	16	38356	25302	31974	-25302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAGACAACTCAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	5675876	5668947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5669070_5669166_5669216_5671919_5672044_5675749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019021	chr5	-	599	1	ISM	ENSMUSG00000015653.14	ENSMUST00000115426.9	10408	6	22490	6661	10975	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTTCTCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	5722088	5721489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5721500_5722100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019022	chr5	-	728	2	ISM	ENSMUSG00000015653.14	ENSMUST00000164219.8	10089	4	7056	8305	7056	-1406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGTTGGGCACAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	5726007	5723135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5723697_5725840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019023	chr5	-	639	2	ISM	ENSMUSG00000015653.14	ENSMUST00000164219.8	10089	4	5270	11013	5270	-4114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTATACTGGGGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5727793	5725843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5726006_5727316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019024	chr5	-	881	2	ISM	ENSMUSG00000015653.14	ENSMUST00000164219.8	10089	4	92	12571	92	-5672	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGTTCACGTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5732971	5727401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5727845_5732533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019025	chr5	-	619	2	ISM	ENSMUSG00000015653.14	ENSMUST00000015797.11	3657	6	10648	11074	-356	-10835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTAGGTCCCAAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	5733419	5732564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5733056_5733291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019026	chr5	-	197	1	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	12813	0	12813	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTATCACAACTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	5786513	5786316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5786300_5786500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019027	chr5	-	314	2	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	9374	200	9374	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTGCCTGCCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	5789952	5786516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5786674_5789795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019028	chr5	-	310	2	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	8832	3479	8832	-3479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCGTGCATAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	5790494	5789795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5789961_5790349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019029	chr5	-	348	3	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	4	4389	4	-4389	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCCCTGACTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5799322	5790705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_5790863_5792825_5792941_5799246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019030	chr5	-	614	1	FSM	ENSMUSG00000100801.2	ENSMUST00000117405.2	1941	1	1451	-124	1451	124	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTACACGAGAAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	5832104	5831490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_5831500_5832100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019031	chr5	+	208	1	FSM	ENSMUSG00000095159.3	ENSMUST00000179460.3	1336	1	1280	-152	1280	152	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAGTACTATCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	7230644	7230852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_7230600_7230900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019032	chr5	+	2061	6	ISM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	2826	-7	2826	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCATAAGCATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8109352	8119158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019033	chr5	-	738	1	ISM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	24970	0	24872	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATAATTTCAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	8447710	8446972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_8447000_8447700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019034	chr5	-	1391	3	ISM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	19523	0	19389	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	8453193	8447010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_8448163_8449687_8449813_8453079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019035	chr5	-	1799	4	FSM	ENSMUSG00000003974.7	ENST00000439827.1	1779	4	1	-21	1	21	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAACCCTAGTACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	9640185	9535683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_9535842_9554724_9554900_9619918_9620775_9639575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019036	chr5	-	1432	3	NNC	ENSMUSG00000003974.7	novel	1779	4	NA	NA	101	-19123	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGCACATTGTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	9640085	9554827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_9554894_9619918_9620775_9639575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019037	chr5	-	317	1	FSM	ENSMUSG00000105854.2	ENSMUST00000197212.2	763	1	446	0	446	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAACAAATAAATAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	12529149	12528832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_12528800_12529100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019038	chr5	+	1712	1	FSM	ENSMUSG00000105366.2	ENSMUST00000200088.2	2199	1	489	-2	489	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTGTAGCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	13654491	13656203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_13654500_13656200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019039	chr5	+	985	1	FSM	ENSMUSG00000106339.2	ENSMUST00000196810.2	993	1	9	-1	9	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAATAAGTCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	16777957	16778942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_16778000_16778900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019040	chr5	+	189	2	ISM	ENSMUSG00000109903.2	ENSMUST00000211738.2	2987	21	20277	66324	20277	-66324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGTCATTATCATT	NA	NA	NA	NA	NA	NA	NA	NA	17017084	17020726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_17017182_17020634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019041	chr5	+	169	2	ISM	ENSMUSG00000109903.2	ENSMUST00000211738.2	2987	21	30410	58936	30410	-58936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATATAGGGGATACAGT	NA	NA	NA	NA	NA	NA	NA	NA	17027217	17028114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_17027308_17028035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019042	chr5	-	300	3	ISM	ENSMUSG00000002944.16	ENST00000433696.6	1309	10	40570	0	40570	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTAAGCAAAGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	17993323	17990713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_17990885_17992683_17992739_17993249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019043	chr5	-	173	1	NIC	ENSMUSG00000002944.16	novel	3399	15	NA	NA	43007	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTTAAGCAAAGTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	17990886	17990713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_17990700_17990900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019044	chr5	-	238	3	ISM	ENSMUSG00000002944.16	ENST00000544133.5	1238	11	17670	9859	17670	-9859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTCTCTTATTGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	18016223	18000572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_18000696_18003226_18003297_18016178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019045	chr5	-	490	3	ISM	ENSMUSG00000002944.16	ENST00000433696.6	1309	10	8294	28397	8294	-28397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTACCAAATATAAATG	NA	NA	NA	NA	NA	NA	NA	NA	18025599	18019110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_18019291_18019670_18019819_18025437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019046	chr5	-	335	3	ISM	ENSMUSG00000002944.16	ENST00000433696.6	1309	10	43	29009	43	-29009	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTTGGAACAGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	18033850	18019722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_18019819_18025437_18025599_18033772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019047	chr5	+	267	2	ISM	ENSMUSG00000040003.19	ENST00000637441.1	5116	19	129534	489320	-33100	-436241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAAAGCCTGAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	20400083	20420435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20400232_20420316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019048	chr5	+	203	2	ISM	ENSMUSG00000040003.19	ENST00000637441.1	5116	19	149848	476313	-12786	-423234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGGTAGGTTATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	20420397	20433442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20420528_20433369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019049	chr5	+	138	2	ISM	ENSMUSG00000040003.19	ENSMUST00000197553.5	3264	17	186	292707	186	-292707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTCTAAGCGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	20433369	20563969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20433450_20563911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019050	chr5	+	243	2	ISM	ENSMUSG00000040003.19	ENSMUST00000197553.5	3264	17	160884	260279	160884	-260279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACAGGTGAAAAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	20594067	20596397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20594190_20596276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019051	chr5	+	193	2	ISM	ENSMUSG00000040003.19	ENSMUST00000197553.5	3264	17	300101	117183	300101	-117183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATCGAGAGCCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	20733284	20739493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20733319_20739334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019052	chr5	+	194	2	ISM	ENSMUSG00000040003.19	ENSMUST00000197553.5	3264	17	322057	90387	322057	-90387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCCGCAATGGGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	20755240	20766289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20755297_20766151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019053	chr5	+	197	2	ISM	ENSMUSG00000040003.19	ENSMUST00000197553.5	3264	17	333047	82490	333047	-82490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACAGCAACCACGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	20766230	20774186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20766345_20774103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019054	chr5	+	264	2	ISM	ENSMUSG00000040003.19	ENST00000637441.1	5116	19	503667	102283	341033	-49204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCTCCTCCCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	20774216	20807472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20774353_20807344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019055	chr5	+	226	2	ISM	ENSMUSG00000040003.19	ENSMUST00000197553.5	3264	17	374161	42364	374161	-42364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCCCTTCACAGACTACA	NA	NA	NA	NA	NA	NA	NA	NA	20807344	20814312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20807520_20814261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019056	chr5	+	188	2	ISM	ENSMUSG00000040003.19	ENSMUST00000197553.5	3264	17	381233	40487	381233	-40487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGATGCCTCAGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	20814416	20816189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20814458_20816042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019057	chr5	+	172	2	ISM	ENSMUSG00000040003.19	ENST00000637441.1	5116	19	585523	2635	422889	-781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCGTCTCCCTCGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	20856072	20907120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20856192_20907067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019058	chr5	+	232	1	ISM	ENSMUSG00000040003.19	ENSMUST00000197443.5	6578	21	1477473	14	476342	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATCCAAAAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20909525	20909757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_20909500_20909800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019059	chr5	-	1552	1	ISM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	121805	105	94880	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTGTTTTTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	20965317	20963765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_20963800_20965300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019060	chr5	-	1704	3	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	90909	806	90909	-806	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGTGTTAAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	20969288	20964572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_20966074_20966661_20966788_20969211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019061	chr5	-	286	2	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	80987	14972	80987	-14972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGAAGAAAGTACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	20979210	20978738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_20978815_20979000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019062	chr5	+	1140	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	21087195	21091868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_21087654_21091186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019063	chr5	-	574	1	ISM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	55658	2563	55658	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACAATTCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21101162	21100588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21100600_21101200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019064	chr5	+	313	3	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	-1	2835	-1	-2835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAAATCTGAGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	21483040	21492794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21483139_21486505_21486601_21492674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019065	chr5	+	388	4	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	3455	741	3455	-741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCGAGTAAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	21486496	21494888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21486601_21492674_21492795_21493585_21493648_21494786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019066	chr5	-	217	2	Antisense	novelGene_ENSMUSG00000039934.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGTTAAAAACAACAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	21492794	21486504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_21486598_21492670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019067	chr5	+	266	3	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	10542	487	10542	-487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCATACCTCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	21493583	21495142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21493648_21494786_21494889_21495042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019068	chr5	+	298	3	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	11744	-1	11744	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACGTGCAGACGGACGAT	NA	NA	NA	NA	NA	NA	NA	NA	21494785	21495630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21494889_21495042_21495143_21495535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019069	chr5	+	1189	1	Genic_Genomic	ENSMUSG00000039934.13	novel	NA	NA	NA	NA	12492	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTTTAAATGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	21495533	21496722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_21495500_21496700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019070	chr5	+	744	6	FSM	ENSMUSG00000047221.6	ENST00000443595.2	746	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGACAACAGAAGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	21630296	21660857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_21630579_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019071	chr5	+	395	4	ISM	ENSMUSG00000047221.6	ENST00000413034.3	994	8	13405	21148	13405	3435	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAGACGGCATATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21643715	21664292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21643837_21652313_21652356_21660779_21660876_21664156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019072	chr5	+	343	3	ISM	ENSMUSG00000047221.6	ENST00000413034.3	994	8	30468	0	30468	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGCGGTTTCAGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	21660778	21685440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21660876_21664156_21664292_21685329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019073	chr5	+	2010	3	ISM	ENSMUSG00000039883.6	ENSMUST00000035651.6	2154	4	16835	-11	16835	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTTTTACATATAACT	NA	NA	NA	NA	NA	NA	NA	NA	21765395	21780913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21766298_21775217_21775374_21779961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019074	chr5	+	1049	3	ISM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	7497	531	7323	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTGAGCTCATCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21858373	21867161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21858551_21865550_21865623_21866361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019075	chr5	+	855	1	ISM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	15961	0	15787	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCAATTTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	21866837	21867692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21866800_21867700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019076	chr5	-	1637	1	ISM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	36855	2	36855	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAAAAGATACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	21869537	21867900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21867900_21869500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019077	chr5	+	701	5	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	5614	8242	5614	-8242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAAAAAGCTCTAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	21947752	21953908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019078	chr5	+	586	5	ISM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	11607	0	11607	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTAGTCTGTTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	21953745	21962150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019079	chr5	-	420	3	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	24616	0	24616	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAAAGTGTGTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	21965472	21962251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21962408_21962762_21962918_21965363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019080	chr5	-	527	4	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	23388	510	23388	-482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCGTTAACAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	21966700	21962761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21962918_21965363_21965472_21965623_21965725_21966538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019081	chr5	-	458	4	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	18381	3202	18381	-3174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTAACAAAAAGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21971707	21965453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21965472_21965623_21965725_21966538_21966724_21971553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019082	chr5	-	391	3	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	16568	4317	16568	-4289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTCTTCCCTGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	21973520	21966568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21966724_21971553_21971704_21973434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019083	chr5	-	365	3	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	16352	9302	16352	7951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCCAGACTGCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	21973736	21971553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21971704_21973434_21973557_21973643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019084	chr5	-	350	4	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	11243	11183	11243	6070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCTACATGGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21978845	21973434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21973557_21973643_21973736_21975482_21975549_21978775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019085	chr5	-	401	4	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	3692	16523	3692	730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGTGACTGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	21986396	21978774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21978857_21979931_21980074_21981714_21981814_21986318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019086	chr5	-	367	3	ISM	ENSMUSG00000029014.15	ENSMUST00000115192.2	1132	5	1947	2210	1852	-2210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAAATACCTCACATT	NA	NA	NA	NA	NA	NA	NA	NA	21988236	21981714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_21981814_21986318_21986395_21988044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019087	chr5	+	501	3	ISM	ENSMUSG00000028932.9	ENSMUST00000239497.2	1775	13	8	8631	8	-8562	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTTCAAATGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	21990288	22000144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21990516_21991647_21991883_22000105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019088	chr5	+	358	3	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	-124	7861	-124	-7861	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATTTATCCCAACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	21991647	22000845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_21991883_22000105_22000144_22000760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019089	chr5	+	389	4	ISM	ENSMUSG00000028932.9	ENSMUST00000239497.2	1775	13	10480	3767	8989	-3698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACCTGGGGGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	22000760	22005008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_22000843_22001530_22001631_22004420_22004553_22004933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019090	chr5	+	647	6	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	9758	1094	9758	-1094	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATGATATTTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	22001529	22007612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205_22006371_22007523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019091	chr5	+	468	4	ISM	ENSMUSG00000028932.9	ENSMUST00000239497.2	1775	13	14138	2405	12647	-2336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGTGAATTTGTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22004418	22006370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_22004553_22004933_22005007_22005541_22005638_22006205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019092	chr5	+	410	3	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	14434	482	14434	-482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGGCTGGACAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	22006205	22008224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_22006371_22007523_22007612_22008067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019093	chr5	+	611	4	ISM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	15766	-75	15766	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAGTGCTTCCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	22007537	22008781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_22007612_22008067_22008271_22008363_22008461_22008544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019094	chr5	-	957	7	ISM	ENSMUSG00000029015.10	ENST00000393730.5	2357	17	27630	0	27630	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGGCCTCTTGCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	22024737	22015967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_22016340_22018322_22018378_22018851_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019095	chr5	-	375	1	NIC	ENSMUSG00000029015.10	novel	2768	18	NA	NA	36024	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACAGGCCTCTTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	22016343	22015968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_22016000_22016300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019096	chr5	-	452	4	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	9981	12577	9981	-12577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACGCCATTGCCATCGC	NA	NA	NA	NA	NA	NA	NA	NA	22042386	22028546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_22028596_22036444_22036528_22039214_22039368_22042219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019097	chr5	-	469	4	ISM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	6780	23285	6780	-23285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATTGCCAGCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	22045587	22039254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_22039368_22042219_22042385_22042878_22043046_22045563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019098	chr5	-	402	1	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	63485	0	63485	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	22691888	22691486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_22691500_22691900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019099	chr5	-	598	3	ISM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	33559	357	33559	-357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAACTATCCCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	22721814	22691843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_22692216_22704973_22705087_22721701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019100	chr5	-	165	1	FSM	ENSMUSG00000106181.2	ENSMUST00000199146.2	1159	1	1000	-6	1000	6	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCCTTTTTTCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	22898717	22898552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_22898600_22898700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019101	chr5	-	459	2	ISM	ENSMUSG00000073147.4	ENSMUST00000185943.2	1477	7	48939	3	48924	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAGAACTATGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23589383	23587308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_23587528_23589143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019102	chr5	-	487	3	ISM	ENSMUSG00000073147.4	ENSMUST00000185943.2	1477	7	37999	4556	37984	-4556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCATTTCTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	23600323	23591861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_23592036_23595053_23595305_23600261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019103	chr5	-	2014	1	FSM	ENSMUSG00000073147.4	ENSMUST00000101522.3	2110	1	101	-5	101	5	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATAACCTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	23638816	23636802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_23636800_23638800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019104	chr5	-	1865	1	ISM	ENSMUSG00000062604.12	ENSMUST00000088392.9	6491	15	111406	0	111406	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAGAGCACATTTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	23710126	23708261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_23708300_23710100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019105	chr5	+	959	1	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	68836	0	68828	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATATGAAAATATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23708274	23709233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_23708300_23709200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019106	chr5	-	1903	3	ISM	ENSMUSG00000062604.12	ENSMUST00000088392.9	6491	15	101845	2703	101845	-2703	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTTAATCAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23719687	23710964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_23712719_23718949_23719043_23719631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019107	chr5	-	376	1	Genic_Genomic	ENSMUSG00000105987.5	novel	NA	NA	NA	NA	9404	3	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTCGCTGATCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	23906019	23905643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_23905600_23906000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019108	chr5	-	417	3	ISM	ENSMUSG00000105987.5	ENSMUST00000199941.5	2804	4	1515	2363	-726	-2363	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGTGAGGGCAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	23916149	23908009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_23908348_23915363_23915407_23916113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019109	chr5	-	375	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGTCTCGCTGATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	23914153	23913778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr5_-_23913800_23914200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019110	chr5	-	680	1	ISM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	42384	0	38231	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAAAAATCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	23946325	23945645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_23945600_23946300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019111	chr5	-	684	3	ISM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	36108	763	36108	-763	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCAGTTCCCGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23948448	23946416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_23946975_23947341_23947434_23948414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019112	chr5	+	332	1	ISM	ENSMUSG00000028999.16	ENSMUST00000117783.8	560	3	5857	0	5854	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCTGGATCATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23998566	23998898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_23998600_23998900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019113	chr5	-	900	1	Genic_Genomic	ENSMUSG00000028998.7	novel	NA	NA	NA	NA	4319	1	mono-exon	FALSE	NA	NA	NA	NA	NA	395	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTAGTGTAGTCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	24044840	24043940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_24043900_24044800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019114	chr5	-	1125	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTGTAGTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	24049159	24043941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_24044827_24046707_24046757_24048968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019115	chr5	-	894	2	ISM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	2394	49	2394	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTTCTGTATTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24046765	24043990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24044827_24046707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019116	chr5	-	1015	3	NNC	ENSMUSG00000028998.7	novel	1125	3	NA	NA	57	-57	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTGGGACTTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	24049102	24043998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_24044827_24046707_24046757_24048964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019117	chr5	-	987	2	NNC	ENSMUSG00000028998.7	novel	1125	3	NA	NA	52	-81	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGAGTCATGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	24049107	24044022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_24044827_24048924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019118	chr5	-	782	2	Genic_Genomic	ENSMUSG00000106133.2	novel	349	1	NA	NA	-64	542	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTTAAAAGTCCAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	24323726	24322771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_24323402_24323574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019119	chr5	+	1494	3	ISM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	56384	46	56366	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCAATCAATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24361986	24365737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24362090_24363536_24363635_24364444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019120	chr5	+	1344	1	NIC	ENSMUSG00000028986.13	novel	2857	10	NA	NA	58822	3	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATTTGCTTTGTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	24364442	24365786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_24364400_24365800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019121	chr5	+	1655	1	ISM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	17396	0	17396	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGTCTGTTATCTACC	NA	NA	NA	NA	NA	NA	NA	NA	24387356	24389011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24387400_24389000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019122	chr5	+	958	1	FSM	ENSMUSG00000081071.2	ENSMUST00000117132.2	216	1	-112	-630	-112	630	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACCTTAGGTAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	24461707	24462665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_24461700_24462700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019123	chr5	+	953	2	ISM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	14412	-109	14412	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGACTAGGCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	24613564	24615052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24613817_24614351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019124	chr5	+	207	1	ISM	ENSMUSG00000028973.19	ENSMUST00000115077.8	3074	17	16064	108	15585	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGGCTGTAGCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	24614737	24614944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24614700_24614900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019125	chr5	+	510	3	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	7128	4720	7128	-4720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACTCATCTTCATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	24640548	24641225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24640759_24640839_24640989_24641074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019126	chr5	+	427	2	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	12004	0	12004	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTAGGCTTGGTCTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	24645424	24645945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24645576_24645669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019127	chr5	-	808	1	ISM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	1589	0	687	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGTTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	24651263	24650455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24650500_24651300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019128	chr5	-	1471	3	ISM	ENSMUSG00000028958.16	ENST00000392818.7	1533	4	41175	21	-26	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGAAACTGTGACGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24652341	24650484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24651272_24651531_24651951_24652076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019129	chr5	-	644	3	NNC	ENSMUSG00000028958.16	novel	1455	3	NA	NA	153	-663	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCCCCCACATCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	24652162	24651137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_24651272_24651531_24651951_24652071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019130	chr5	-	605	3	ISM	ENSMUSG00000028958.16	ENST00000392818.7	1533	4	22	1166	22	-1155	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCGCAGGAACCCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	24693494	24651629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24651951_24652076_24652339_24693472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019131	chr5	+	1149	3	ISM	ENSMUSG00000023353.15	ENST00000479901.5	1883	8	25564	-1	1393	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTCTTGGTTCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	24682768	24688181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24682872_24683007_24683136_24687263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019132	chr5	+	920	1	NIC	ENSMUSG00000023353.15	novel	1883	8	NA	NA	5885	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTCTTGGTTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	24687260	24688180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_24687300_24688200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019133	chr5	+	1120	3	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	23745	0	23745	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	24705120	24707035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24705344_24706007_24706264_24706394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019134	chr5	-	298	1	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	11825	0	11825	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	24770640	24770342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24770300_24770600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019135	chr5	-	598	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	10151	398	10151	-398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCAGCCTGCCTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	24772314	24770740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24771002_24771476_24771681_24772181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019136	chr5	-	335	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	9907	1192	9907	-1192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAGTTTGAGGGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	24772558	24771534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24771681_24772181_24772311_24772498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019137	chr5	-	382	4	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	8823	1838	8823	-1838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGAGGAGCCCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	24773642	24772180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24772311_24772498_24772562_24773202_24773314_24773564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019138	chr5	-	370	4	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	8605	2175	8605	-2175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGGGCGTTACCATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	24773860	24772517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24772562_24773202_24773314_24773564_24773655_24773735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019139	chr5	-	295	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	8299	3235	8299	-3235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGAAAGACGGGGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	24774166	24773577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24773655_24773735_24773856_24774068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019140	chr5	-	272	3	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	8300	-3249	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCTTCAAATATACGAA	NA	NA	NA	NA	NA	NA	NA	NA	24774165	24773591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_24773655_24773743_24773856_24774068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019141	chr5	-	319	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	6221	3393	6221	-3393	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGTGACAGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24776244	24773735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24773856_24774068_24774165_24776141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019142	chr5	-	297	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	5367	3726	5367	-3726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGGAAATCACACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24777098	24774068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24774165_24776141_24776245_24777000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019143	chr5	-	473	3	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	3773	5798	3773	-5798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGAGCCTTGCCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	24778692	24776140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24776245_24777000_24777097_24778419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019144	chr5	-	487	2	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	3085	8161	3085	-8161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGGGCTTCACACCTG	NA	NA	NA	NA	NA	NA	NA	NA	24779380	24778503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24778775_24779164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019145	chr5	-	423	2	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	740	8821	740	-8821	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCCTTGGGGGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	24781725	24779163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24779378_24781516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019146	chr5	-	291	2	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	766	-8921	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCCTTACCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	24781699	24779263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_24779372_24781516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019147	chr5	-	326	2	ISM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	4	11174	4	-11174	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTGGGTGAGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	24782461	24781516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24781726_24782344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019148	chr5	+	782	2	ISM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	1279	2878	1279	-2878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGCTGCCTCATCG	NA	NA	NA	NA	NA	NA	NA	NA	24793026	24794604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24793299_24794094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019149	chr5	+	549	2	ISM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	2457	2082	2457	-2082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCGAGGGCACCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	24794204	24795400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24794660_24795306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019150	chr5	+	797	2	ISM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	3606	755	3606	-755	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGGCTGGCCTGGCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	24795353	24796727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24795490_24796066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019151	chr5	+	729	2	ISM	ENSMUSG00000038181.17	ENSMUST00000088295.9	5371	5	6275	387	6266	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTCAAAAATCTGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	24798013	24799006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_24798352_24798615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019152	chr5	-	1216	2	ISM	ENSMUSG00000097275.2	ENSMUST00000181925.2	5831	3	111	6286	111	-6286	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTTTCTTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	24909577	24908185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_24909216_24909391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019153	chr5	-	1071	5	FSM	ENSMUSG00000055235.12	ENST00000628331.1	1066	5	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGAGAGGAGACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	24935404	24917571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_24917750_24917847_24917952_24922964_24923386_24927632_24927775_24935178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019154	chr5	-	1259	6	ISM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	28772	0	-6046	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATCCTCCATCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25018850	25007820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019155	chr5	-	180	3	FSM	ENSMUSG00000028945.10	ENST00000411920.1	168	3	-5	-7	-5	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTTTCTAAAATTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	25012809	25011992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_25012059_25012600_25012651_25012745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019156	chr5	-	163	3	NNC	ENSMUSG00000028945.10	novel	168	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATGTAGTTTCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25012804	25011999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_25012059_25012600_25012651_25012750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019157	chr5	-	166	3	NIC	ENSMUSG00000028945.10	novel	168	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATGTAGTTTCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25012804	25011999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_25012059_25012602_25012651_25012745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019158	chr5	-	129	2	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	2	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGTATGTAGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	25012802	25012001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_25012070_25012741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019159	chr5	-	750	1	ISM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	237131	18	44958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACCAGTTTGCTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	25068509	25067759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25067800_25068500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019160	chr5	-	1142	3	ISM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	39192	239	39192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGACGCTTGTAACTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	25074275	25067984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25068886_25071076_25071171_25074128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019161	chr5	-	182	1	NIC	ENSMUSG00000028944.15	novel	3331	16	NA	NA	44578	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAAGTATAGGAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	25068889	25068707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_25068700_25068900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019162	chr5	-	192	2	ISM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	34561	8745	34561	-7783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGGCCACGCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	25078906	25076490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25076658_25078881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019163	chr5	-	187	2	ISM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	19279	17940	19279	-16978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTAGTAGCGCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	25094188	25085685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25085764_25094079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019164	chr5	-	179	2	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	87361	26332	77	-25370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATACCGAGCTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	25113390	25094077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25094187_25113320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019165	chr5	-	157	1	FSM	ENSMUSG00000054116.2	ENSMUST00000066954.2	306	1	149	0	149	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCACCGCCCGCGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	25428002	25427845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_25427800_25428000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019166	chr5	+	646	3	ISM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	16016	267	16016	-266	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCCCTTGGAGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	25468376	25470649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_25468483_25469959_25470098_25470247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019167	chr5	+	532	1	ISM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	42505	0	18024	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACTCTTCTATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25470384	25470916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_25470400_25470900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019168	chr5	-	2842	3	ISM	ENSMUSG00000038056.16	ENSMUST00000045291.14	14967	59	183368	36660	48187	-36660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGAGGAAAGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	25520375	25515266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25516418_25518253_25518547_25518977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019169	chr5	-	219	1	NIC	ENSMUSG00000038056.16	novel	15342	60	NA	NA	12298	4	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCATTAATTTTCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	25556264	25556045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_25556000_25556300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019170	chr5	-	792	6	ISM	ENSMUSG00000038056.16	ENST00000436174.5	967	7	3924	3	3924	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAATGCTCATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	25564638	25556052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25556263_25557237_25557291_25558296_25558456_25559281_25559498_25564309_25564415_25564589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019171	chr5	-	223	2	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	13893	65	11263	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAGACCCCTCCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	25557299	25556114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25556263_25557224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019172	chr5	-	276	3	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	12783	116	10153	-116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAAAACCAAAACTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	25558409	25556165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25556263_25557224_25557291_25558296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019173	chr5	-	333	3	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	11694	1184	9064	-1184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCTAGGTAAAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	25559498	25557233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25557291_25558296_25558407_25559332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019174	chr5	-	329	2	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	11385	3290	8755	-3290	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATAGGTACTGCGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	25559807	25559339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25559498_25559636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019175	chr5	-	328	3	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	2631	3598	1	-3598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCAAATGGTACCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	25568561	25559647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25559819_25564309_25564349_25568443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019176	chr5	-	267	3	ISM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	1	8266	1	-8266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGTAAATGTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	25571191	25564315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_25564349_25568443_25568561_25571074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019177	chr5	+	1454	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCTGGTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25735010	25736464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_25735000_25736500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019178	chr5	-	3240	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATATTTCATATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25910816	25894809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_25897827_25903248_25903331_25910675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019179	chr5	+	1228	1	Genic_Genomic	ENSMUSG00000059645.7	novel	NA	NA	NA	NA	5391	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCTCTTATGTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	26468079	26469307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_26468100_26469300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019180	chr5	-	1080	1	Genic_Genomic	ENSMUSG00000097673.2	novel	NA	NA	NA	NA	34916	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGTTGCCTTGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	28225541	28224461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_28224500_28225500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019181	chr5	+	2675	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	5	17	5	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGGTTCAAAACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	28276365	28283643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019182	chr5	+	491	3	FSM	ENSMUSG00000045294.12	ENST00000342407.5	752	3	1	260	1	-260	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCACCCTCACACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28276618	28282004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_28276794_28280059_28280160_28281788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019183	chr5	-	335	2	Antisense	novelGene_ENSMUSG00000045294.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAACGGATATAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	28282062	28280095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_28280155_28281786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019184	chr5	+	1874	1	Genic_Genomic	ENSMUSG00000045294.12	novel	NA	NA	NA	NA	5170	1	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTATTCCTGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	28281787	28283661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_28281800_28283700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019185	chr5	-	429	1	ISM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	148154	0	148072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTTTATAAGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	29435228	29434799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_29434800_29435200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019186	chr5	+	2773	2	ISM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	14916	4154	14916	-4154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAGGCAGAGGCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	29654577	29658687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_29654690_29656026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019187	chr5	+	2707	1	Genic_Genomic	ENSMUSG00000001569.11	novel	NA	NA	NA	NA	20487	14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCCTGCCTCTGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	29660148	29662855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_29660100_29662900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019188	chr5	+	401	1	ISM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	106450	0	106246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGTCAGTTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	29880689	29881090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_29880700_29881100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019189	chr5	+	1189	2	ISM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	45503	519	45158	319	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTTACATCGAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	29986188	29990957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_29986449_29990028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019190	chr5	+	983	1	Genic_Genomic	ENSMUSG00000029131.15	novel	NA	NA	NA	NA	49464	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGTGTGTATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	29990494	29991477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_29990500_29991500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019191	chr5	-	220	1	ISM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	14571	0	14571	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTGTTAAGACTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	30264044	30263824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30263800_30264000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019192	chr5	-	408	3	ISM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	10218	2135	10218	-2135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAATTAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	30268397	30265959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30266132_30266965_30267038_30268233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019193	chr5	-	444	3	ISM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	4986	4409	4986	-4409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTCTTTCGGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	30273629	30268233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30268410_30269082_30269185_30273463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019194	chr5	-	226	2	ISM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	1908	9664	1908	-9664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAGTACAAAGATATGGA	NA	NA	NA	NA	NA	NA	NA	NA	30276707	30273488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30273639_30276631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019195	chr5	-	285	2	ISM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	47	12806	47	-12806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTAGTGCTGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30278568	30276630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30276706_30278358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019196	chr5	-	1915	3	ISM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	34366	-3	34366	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACAGCCTAGGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30325794	30323298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30324959_30325042_30325189_30325685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019197	chr5	-	1662	1	Genic_Genomic	ENSMUSG00000025745.13	novel	NA	NA	NA	NA	35200	3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACAGCCTAGGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30324960	30323298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_30323300_30325000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019198	chr5	-	320	1	NIC	ENSMUSG00000067642.12	novel	3099	14	NA	NA	9165	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGGCAAGGGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	30401555	30401235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_30401200_30401600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019199	chr5	-	379	2	ISM	ENSMUSG00000067642.12	ENST00000311519.5	2548	8	21189	2124	6508	-2124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCTTGGGGCATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	30404212	30403359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30403541_30404014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019200	chr5	-	346	2	ISM	ENSMUSG00000067642.12	ENSMUST00000088117.11	3099	14	3243	7111	3243	-4304	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCTCCTGTACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	30407477	30405539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30405645_30407236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019201	chr5	-	442	3	ISM	ENSMUSG00000067642.12	ENST00000311519.5	2548	8	2	5999	2	-5999	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCCAGTTTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	30425399	30407234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_30407481_30407954_30408132_30425380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019202	chr5	+	365	2	ISM	ENSMUSG00000029175.18	ENSMUST00000196740.5	1972	7	7551	2167	7551	-2167	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTCAGTGAAGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	30812835	30813421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_30813011_30813231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019203	chr5	+	491	3	ISM	ENSMUSG00000029175.18	ENSMUST00000196740.5	1972	7	8056	592	8056	-592	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCACTGGGCTGGGAGATC	NA	NA	NA	NA	NA	NA	NA	NA	30813340	30814996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_30813445_30814090_30814202_30814720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019204	chr5	+	311	1	Genic_Genomic	ENSMUSG00000029175.18	novel	NA	NA	NA	NA	11482	4	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTTTTAAATGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	30816766	30817077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_30816800_30817100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019205	chr5	+	1464	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTAAAGTTACTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	30824123	30832175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019206	chr5	+	1416	5	NNC	ENSMUSG00000029177.10	novel	1466	5	NA	NA	46	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTAAAGTTACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	30824166	30832174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_30824458_30829807_30829915_30830325_30830404_30830640_30830788_30831381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019207	chr5	+	1416	5	NNC	ENSMUSG00000029177.10	novel	1466	5	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTAAAGTTACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	30824168	30832174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830786_30831381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019208	chr5	+	1398	5	NNC	ENSMUSG00000029177.10	novel	1466	5	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTAAAGTTACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	30824183	30832174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_30824458_30829807_30829915_30830330_30830404_30830636_30830788_30831381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019209	chr5	+	844	2	ISM	ENSMUSG00000029168.15	ENST00000288699.11	3250	13	48710	2460	48710	-2460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGTGCTTTCTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	30951275	30954253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_30951447_30953580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019210	chr5	+	730	2	NNC	ENSMUSG00000029168.15	novel	3250	13	NA	NA	51359	-561	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCCCCTGTGTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	30953924	30956152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_30954347_30955844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019211	chr5	+	684	1	ISM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	87122	6	53464	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGCCTCTGTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30956029	30956713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_30956000_30956700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019212	chr5	+	1535	5	ISM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	47957	0	8713	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTCTGTCTTTTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	31019941	31023450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019213	chr5	+	1952	2	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	-1619	6311	0	-6311	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGCCAAAACCAGAAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	31025355	31028077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31027163_31027932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019214	chr5	+	1871	2	ISM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	6731	-1343	6731	-793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGCAGTGATTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	31033705	31035731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31033853_31034007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019215	chr5	+	1837	1	ISM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	9332	0	7713	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGGCTCATACCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	31034687	31036524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31034700_31036500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019216	chr5	-	1158	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	-4	-10	-4	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTAGTCTTTGGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	31065136	31063218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_31064111_31064742_31064881_31065008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019217	chr5	-	1114	3	NNC	ENSMUSG00000038803.8	novel	1144	3	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAAGTGCATTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	31065110	31063228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_31064103_31064742_31064881_31065008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019218	chr5	-	578	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGTGGTCCCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	31065069	31063859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_31064111_31064742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019219	chr5	-	1346	6	NIC	ENSMUSG00000029161.8	novel	1442	6	NA	NA	40	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTTGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	31102845	31090486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093319_31102701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019220	chr5	-	847	1	NIC	ENSMUSG00000029161.8	novel	1442	6	NA	NA	11552	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTTGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	31091333	31090486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_31090500_31091300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019221	chr5	-	1224	1	ISM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	8285	0	8090	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGATTGTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	31109420	31108196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31108200_31109400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019222	chr5	-	1418	2	ISM	ENSMUSG00000045302.14	ENST00000406567.7	1721	8	4064	-570	4064	550	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCAACACTGGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	31113446	31111836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31113082_31113273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019223	chr5	-	699	1	NIC	ENSMUSG00000045302.14	novel	6300	9	NA	NA	4426	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCAGTCCTCTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	31113084	31112385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_31112400_31113100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019224	chr5	-	813	3	ISM	ENSMUSG00000045302.14	ENSMUST00000202567.2	1869	8	2307	41	2193	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGTTGATATTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	31115317	31112427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31113082_31113605_31113679_31115231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019225	chr5	+	240	2	ISM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	2	5042	2	-4812	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGGAGGAGAAGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	31205980	31206925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31206101_31206805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019226	chr5	+	266	3	ISM	ENSMUSG00000013622.16	ENSMUST00000201136.2	894	7	675	1859	675	-1859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTAATACAGGAAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31206803	31209878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31206925_31209540_31209613_31209805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019227	chr5	+	194	2	ISM	ENSMUSG00000013622.16	ENSMUST00000201136.2	894	7	3677	1509	3677	-1509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTTTAGCATGGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	31209805	31210228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31209878_31210106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019228	chr5	+	355	3	ISM	ENSMUSG00000013622.16	ENSMUST00000201136.2	894	7	3977	-3	3977	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCACCCTCATCTATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	31210105	31211740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31210229_31211304_31211403_31211606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019229	chr5	+	174	1	Genic_Genomic	ENSMUSG00000013622.16	novel	NA	NA	NA	NA	5666	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGTACCTGTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	31211794	31211968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_31211800_31212000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019230	chr5	+	228	2	ISM	ENSMUSG00000062077.15	ENSMUST00000202769.2	1408	9	211	6494	109	-6492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCATGGTGTCTATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	31274288	31288480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31274422_31288385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019231	chr5	+	275	2	ISM	ENSMUSG00000062077.15	ENSMUST00000202769.2	1408	9	14340	5509	14238	-5507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCCTCTGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	31288417	31289465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31288559_31289331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019232	chr5	+	200	2	ISM	ENSMUSG00000062077.15	ENST00000296098.4	1322	10	15285	3887	15285	-3487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGAGCTCAGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	31289464	31291485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31289573_31291393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019233	chr5	+	205	2	ISM	ENSMUSG00000062077.15	ENSMUST00000202769.2	1408	9	17315	1480	17213	-1478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGAAGTTGCAGCGCGT	NA	NA	NA	NA	NA	NA	NA	NA	31291392	31293494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31291490_31293386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019234	chr5	+	184	2	NNC	ENSMUSG00000062077.15	novel	1434	9	NA	NA	19370	-646	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTGCGAACCATCGAC	NA	NA	NA	NA	NA	NA	NA	NA	31293549	31294326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_31293621_31294213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019235	chr5	+	152	2	ISM	ENSMUSG00000062077.15	ENSMUST00000202769.2	1408	9	20016	617	19914	-615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGAGCCGGGAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	31294093	31294357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31294120_31294231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019236	chr5	+	223	2	ISM	ENSMUSG00000062077.15	ENSMUST00000202769.2	1408	9	20147	419	20045	-417	internal_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGAGTTGGACGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	31294224	31294555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31294357_31294464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019237	chr5	+	164	2	ISM	ENSMUSG00000062077.15	ENSMUST00000202769.2	1408	9	20386	78	20284	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGACCACCGCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	31294463	31294896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31294558_31294826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019238	chr5	-	810	1	Genic_Genomic	ENSMUSG00000107283.4	novel	NA	NA	NA	NA	4592	1	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTAGCAGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	31298806	31297996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_31298000_31298800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019239	chr5	-	974	4	FSM	ENSMUSG00000107283.4	ENST00000405076.5	320	4	0	-654	0	22	multi-exon	TRUE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGAGGCAGAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	31303427	31298417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31303316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019240	chr5	-	401	4	FSM	ENSMUSG00000107283.4	ENST00000402722.5	394	4	-6	-1	-6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGACAGCTTCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	31303404	31299070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_31299195_31302838_31302935_31303027_31303121_31303316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019241	chr5	-	379	4	NNC	ENSMUSG00000107283.4	novel	394	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGACAGCTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31303395	31299071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_31299179_31302834_31302935_31303027_31303121_31303316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019242	chr5	-	316	4	NNC	ENSMUSG00000107283.4	novel	320	4	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGACAGCTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31303426	31299071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_31299195_31302043_31302097_31302589_31302623_31303319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019243	chr5	-	389	4	NNC	ENSMUSG00000107283.4	novel	394	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGACAGCTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31303396	31299071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_31299195_31302838_31302935_31303027_31303121_31303319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019244	chr5	-	319	3	NNC	ENSMUSG00000107283.4	novel	320	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGACAGCTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31303427	31299071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_31299195_31302043_31302132_31303319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019245	chr5	-	322	3	NNC	ENSMUSG00000107283.4	novel	320	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGACAGCTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31303427	31299071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_31299195_31302043_31302132_31303316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019246	chr5	-	296	3	NNC	ENSMUSG00000107283.4	novel	320	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGACAGCTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31303420	31299071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_31299195_31302043_31302097_31303300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019247	chr5	-	125	1	NIC	ENSMUSG00000107283.4	novel	1724	8	NA	NA	4202	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGGACAGCTTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	31299196	31299071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_31299100_31299200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019248	chr5	+	285	2	Antisense	novelGene_ENSMUSG00000107283.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGCCCATCAGTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	31299071	31303414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_+_31299237_31303294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019249	chr5	+	277	2	Antisense	novelGene_ENSMUSG00000107283.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGATCCTGTGTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	31299073	31303423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_+_31299237_31303309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019250	chr5	-	266	1	ISM	ENSMUSG00000107283.4	ENSMUST00000201491.2	923	7	9682	0	1515	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGAGATGGTGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	31301883	31301617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31301600_31301900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019251	chr5	-	695	1	ISM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	23445	0	17802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	31314043	31313348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31313300_31314000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019252	chr5	-	728	2	ISM	ENSMUSG00000106864.4	ENSMUST00000202639.4	4200	21	21875	619	16259	-619	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGTTATTGCCTTCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	31315586	31314483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31315112_31315486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019253	chr5	-	183	1	ISM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	5690	0	5268	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGCCTTTGTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	31345084	31344901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31344900_31345100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019254	chr5	-	317	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	4988	24	4988	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCAATAAAAAGCTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	31345364	31344934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31345145_31345257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019255	chr5	-	245	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	3312	411	3312	-410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTGAAACGTACAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	31347040	31345321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31345439_31346912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019256	chr5	-	221	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	2998	2089	2998	-2088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCACATGCTCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	31347354	31346999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31347091_31347224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019257	chr5	-	185	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	2544	2363	2544	-2362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTCTACAAAGATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	31347808	31347273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31347353_31347702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019258	chr5	-	171	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	2348	2803	2348	-2802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGAGGAGGTGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31348004	31347713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31347806_31347925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019259	chr5	-	194	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	2055	3015	2055	-3014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCACAGCCGTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	31348297	31347925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31348003_31348180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019260	chr5	-	145	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	1591	3582	1591	-3581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACCTTTAAGTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31348761	31348492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31348585_31348708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019261	chr5	-	227	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	1326	3796	1326	-3795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGTGGGTTTGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	31349026	31348706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31348792_31348884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019262	chr5	-	266	2	ISM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	719	4052	719	-4051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACAGGCAAGAAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	31349633	31348962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31349092_31349496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019263	chr5	-	187	2	ISM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	296	5023	5	-5013	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAGGGAGAGACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	31350478	31349924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31349970_31350336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019264	chr5	+	589	3	ISM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	4850	64	4850	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGAGGTCTGTGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	31355420	31356180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31355489_31355579_31355622_31355701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019265	chr5	+	555	1	ISM	ENSMUSG00000029146.15	ENST00000537606.5	2312	14	5488	0	5485	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAGGCATAGGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	31356055	31356610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31356100_31356600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019266	chr5	-	960	2	ISM	ENSMUSG00000043059.17	ENSMUST00000031562.11	2213	3	1689	324	1689	-324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGGCTCTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	31357697	31356650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31357492_31357578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019267	chr5	-	1140	5	ISM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	15514	3	15514	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTCATAGTGTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	31362395	31360010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019268	chr5	-	919	4	ISM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	12990	1784	12868	-1784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGACTAAGAAACTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	31365041	31361795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31362032_31362341_31362474_31363381_31363798_31364906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019269	chr5	-	823	5	ISM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	254	3383	132	-3383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGACAGTGAGGTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	31377777	31363394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019270	chr5	+	747	6	FSM	ENSMUSG00000029149.15	ENST00000543753.5	813	6	66	0	66	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGCAGAGCCAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31409330	31412152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410352_31412037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019271	chr5	-	181	2	ISM	ENSMUSG00000038564.12	ENST00000675690.1	5252	48	27661	9601	27661	-9601	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTGCTGACAACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	31420765	31420281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31420407_31420709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019272	chr5	-	1627	4	ISM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	1143	0	1078	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTCTGGGACCTATT	NA	NA	NA	NA	NA	NA	NA	NA	31452137	31449585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019273	chr5	+	749	1	ISM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	28571	0	28490	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	31638349	31639098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31638300_31639100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019274	chr5	+	848	3	ISM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	12732	1425	12720	-1425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTATTAGTTATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31664816	31668823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31664909_31666642_31666751_31668175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019275	chr5	+	670	1	Genic_Genomic	ENSMUSG00000064037.14	novel	NA	NA	NA	NA	17484	2	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGCTAAGATTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	31669580	31670250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_31669600_31670200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019276	chr5	-	1468	2	ISM	ENSMUSG00000053134.14	ENSMUST00000200721.4	1657	5	6760	-621	6722	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAAGTCACTTGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	31675852	31672044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31673271_31675610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019277	chr5	-	565	2	ISM	ENSMUSG00000053134.14	ENST00000406540.5	2100	6	4823	2601	4823	-1766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAAAGTTGTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	31677751	31675608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31675849_31677426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019278	chr5	-	625	2	ISM	ENSMUSG00000053134.14	ENST00000406540.5	2100	6	2277	4419	2277	-3584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGACCCTGGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	31680297	31677426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31677752_31679997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019279	chr5	-	487	2	ISM	ENSMUSG00000053134.14	ENST00000406540.5	2100	6	1393	7512	1393	-6677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTTCACTGCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	31681181	31680519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_31680901_31681075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019280	chr5	+	920	3	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	73	6066	73	-6066	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGACTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	31684428	31688100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31685029_31685386_31685583_31687976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019281	chr5	+	341	3	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	1072	4787	791	-4787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTTCTCGTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	31685427	31689379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31685583_31687976_31688100_31689316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019282	chr5	+	365	3	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	4959	2616	4678	-2616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTGTTCATAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	31689314	31691550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31689378_31689787_31689928_31691388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019283	chr5	+	330	3	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	5459	1909	5178	-1909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTCAAGCAAAGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	31689814	31692257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31689928_31691388_31691550_31692201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019284	chr5	+	328	3	ISM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	7065	556	-6334	-556	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGACTTAAAGGGTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	31691420	31693610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31691550_31692201_31692272_31693481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019285	chr5	+	540	3	ISM	ENSMUSG00000029141.17	ENST00000618046.4	2167	14	8843	10086	-4275	7086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTAGTGTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	31693479	31701252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31693669_31697729_31697842_31701013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019286	chr5	+	806	6	FSM	ENSMUSG00000029141.17	ENST00000419995.2	606	6	8	-208	8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATGTACACTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	31697762	31711340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_31697842_31701013_31701258_31703523_31703611_31705957_31706026_31708056_31708127_31711082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019287	chr5	+	309	1	NIC	ENSMUSG00000029141.17	novel	2806	14	NA	NA	13323	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	31711077	31711386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_31711100_31711400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019288	chr5	+	183	2	NNC	ENSMUSG00000106918.4	novel	478	4	NA	NA	0	-6169	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCCAATAGGTAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31771282	31773819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_31771371_31773724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019289	chr5	+	199	2	NNC	ENSMUSG00000106918.4	novel	478	4	NA	NA	0	-6157	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCTCAGAGAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	31771282	31773831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_31771375_31773724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019290	chr5	+	143	2	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	4	-6201	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACTCCGAGAGAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	31771286	31773787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_31771367_31773724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019291	chr5	+	202	2	NNC	ENSMUSG00000106918.4	novel	478	4	NA	NA	8	-6157	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCTCAGAGAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	31771290	31773831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_31771367_31773705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019292	chr5	+	293	3	ISM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	664	101	664	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAAGGGACAGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	31771946	31779887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31771966_31773724_31773832_31779720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019293	chr5	+	209	1	Genic_Genomic	ENSMUSG00000106918.4	novel	NA	NA	NA	NA	8501	4	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTAGAGGTATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	31779783	31779992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_31779800_31780000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019294	chr5	+	373	2	ISM	ENSMUSG00000052139.19	ENSMUST00000063813.11	1410	14	-193	382762	173	-382762	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGTACAAGAACAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	31855200	31859321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31855422_31859169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019295	chr5	+	329	3	ISM	ENSMUSG00000052139.19	ENSMUST00000114515.9	1497	13	3791	299175	3771	-299067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACTGCAGGCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	31859164	31943016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31859322_31888310_31888388_31942921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019296	chr5	+	358	3	ISM	ENSMUSG00000052139.19	ENSMUST00000063813.11	1410	14	32922	264071	32922	-264071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGAGTGCTGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	31888315	31978012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31888388_31942921_31943017_31977821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019297	chr5	+	386	3	ISM	ENSMUSG00000052139.19	ENSMUST00000063813.11	1410	14	122422	183575	122422	-183575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGTCAGTGTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	31977815	32058508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31978017_31988428_31988504_32058398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019298	chr5	+	289	3	ISM	ENSMUSG00000052139.19	ENSMUST00000063813.11	1410	14	133034	83276	133034	-83276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAAGTCCCTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	31988427	32158807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_31988504_32058398_32058509_32158704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019299	chr5	+	336	4	ISM	ENSMUSG00000052139.19	ENSMUST00000063813.11	1410	14	203037	77418	203037	-77418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTTTGGCTGTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	32058430	32164665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_32058509_32158704_32158805_32162053_32162125_32164578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019300	chr5	+	326	4	ISM	ENSMUSG00000052139.19	ENSMUST00000063813.11	1410	14	303394	27074	303394	-27074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGTACATTGTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	32158787	32215009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_32158805_32162053_32162125_32164578_32164662_32214854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019301	chr5	+	398	3	ISM	ENSMUSG00000052139.19	ENSMUST00000063813.11	1410	14	309236	-53	309236	53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGGAGCCCAAAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	32164629	32242136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_32164662_32214854_32215009_32241924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019302	chr5	+	225	1	ISM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	387054	0	386688	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTCCTGAAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	32242081	32242306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_32242100_32242300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019303	chr5	+	1710	4	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	26446	3189	26067	1295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTAACAAATGTCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	32642632	32649678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_32642675_32643224_32643377_32644914_32645050_32648297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019304	chr5	+	1666	1	ISM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	35015	0	34636	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGGTCCTAATAATATAA	NA	NA	NA	NA	NA	NA	NA	NA	32651201	32652867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_32651200_32652900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019305	chr5	-	1103	1	Genic_Genomic	ENSMUSG00000023452.20_ENSMUSG00000093574.2	novel	NA	NA	NA	NA	5073	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCTTTGTATTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	32894746	32893643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_32893600_32894700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019306	chr5	-	1473	4	ISM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	7434	-37	3597	37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGTATGAAAAGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	32896222	32893730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019307	chr5	-	621	4	ISM	ENSMUSG00000023452.20	ENSMUST00000071829.12	1986	6	1685	2033	1685	-2033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAGACTACCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	32898134	32895800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_32895879_32896125_32896265_32896480_32896718_32897967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019308	chr5	-	689	4	ISM	ENSMUSG00000023452.20	ENSMUST00000071829.12	1986	6	72	2405	72	-2405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGGCCCTCGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	32899747	32896172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_32896265_32896480_32896718_32897967_32898134_32899553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019309	chr5	-	484	2	ISM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	626	5786	626	-5786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGATGCTGCCCACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	32903030	32899553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_32899820_32902812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019310	chr5	+	710	1	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	126349	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATAAAGCCCTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	33148279	33148989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_33148300_33149000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019311	chr5	+	895	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	0	869	0	-869	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATAAGGACTCCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	33176159	33184441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_33176499_33183885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019312	chr5	+	592	1	Genic_Genomic	ENSMUSG00000018965.12	novel	NA	NA	NA	NA	8561	2	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTGGCCTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	33184720	33185312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_33184700_33185300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019313	chr5	-	395	1	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	4134	0	4134	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGGGTGACCTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	33371665	33371270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33371300_33371700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019314	chr5	-	653	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	1930	441	1930	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGCGTGGGCAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33373869	33371711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33371997_33372892_33373068_33373676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019315	chr5	-	373	2	NNC	ENSMUSG00000037379.8	novel	2045	6	NA	NA	2768	-486	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCCACAAGGTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	33373031	33371756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_33371991_33372892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019316	chr5	-	548	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	1634	1666	1634	-1666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTGGCCAGCCGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	33374165	33372936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33373068_33373676_33373869_33373940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019317	chr5	-	539	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	990	2505	990	-2505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCCTGGATCTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	33374809	33373775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33373869_33373940_33374165_33374587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019318	chr5	-	697	3	ISM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	139	2786	139	-2786	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGAAGCTGCAGGAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	33375660	33374056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33374165_33374587_33374808_33375291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019319	chr5	-	674	1	Genic_Genomic	ENSMUSG00000037373.13	novel	NA	NA	NA	NA	26586	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGCACCAGTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	33405739	33405065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_33405100_33405700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019320	chr5	-	857	3	ISM	ENSMUSG00000037373.13	ENSMUST00000201575.4	2091	8	25274	326	25263	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATCCTTCCTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33407062	33405423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33406031_33406450_33406569_33406930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019321	chr5	-	641	3	ISM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	25274	539	25263	-268	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTCGTTTAAGCAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	33407062	33405636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33406028_33406450_33406569_33406930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019322	chr5	-	589	4	ISM	ENSMUSG00000037373.13	ENSMUST00000202962.4	3595	7	13826	2457	13826	-2457	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACACAGCCCGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	33418499	33407825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33407846_33408201_33408417_33416481_33416689_33418352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019323	chr5	+	1672	5	ISM	ENSMUSG00000079562.8	ENST00000514708.5	1892	7	24777	-34	24777	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGAGGTGTTTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	33517693	33530641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_33517900_33525981_33526091_33527774_33527909_33528961_33529154_33529610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019324	chr5	+	1344	5	ISM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	30247	168	30183	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAAATAAGTACTGACG	NA	NA	NA	NA	NA	NA	NA	NA	33523099	33530472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019325	chr5	+	1031	1	Genic_Genomic	ENSMUSG00000079562.8	novel	NA	NA	NA	NA	36694	1	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGAGGTGTTTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	33529610	33530641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_33529600_33530600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019326	chr5	-	2355	5	FSM	ENSMUSG00000037339.18	ENSMUST00000045329.10	2346	5	0	-9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGATTCTTTTTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	33786966	33757690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019327	chr5	-	289	2	ISM	ENSMUSG00000004642.14	ENSMUST00000075670.13	1027	8	10363	17	10318	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGTCCTGGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	33799326	33792312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33792520_33799244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019328	chr5	-	1232	4	ISM	ENSMUSG00000004642.14	ENSMUST00000101354.10	1578	7	6683	-2	6677	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCTATACTGTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	33802967	33797396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019329	chr5	-	716	1	ISM	ENSMUSG00000004642.14	ENSMUST00000101354.10	1578	7	11536	0	11530	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	33798114	33797398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33797400_33798100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019330	chr5	-	1164	1	Genic_Genomic	ENSMUSG00000019295.9	novel	NA	NA	NA	NA	1108	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTCATTTTGTTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	33811722	33810558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_33810600_33811700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019331	chr5	-	1745	3	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	2632	276	-298	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACATTTAGTTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	33813128	33810835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33811959_33812056_33812217_33812666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019332	chr5	-	1505	3	FSM	ENSMUSG00000019295.9	ENST00000303277.6	1155	3	-350	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACAGTATGTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	33815746	33811708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_33811959_33812666_33813142_33814966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019333	chr5	-	1163	3	ISM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	240	1523	-124	-374	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTATTCAGTACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	33815520	33812082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33812217_33812666_33813142_33814966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019334	chr5	-	3224	3	ISM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	37657	0	37577	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTACAGTGGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	33902504	33897016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_33899957_33900985_33901125_33902359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019335	chr5	-	2942	1	NIC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	40123	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTACAGTGGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	33899958	33897016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_33897000_33900000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019336	chr5	+	348	3	ISM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	10	910	10	-910	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGACCTACGGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	34140823	34141443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34140984_34141100_34141241_34141395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019337	chr5	+	290	3	ISM	ENSMUSG00000070858.13	ENSMUST00000114382.2	451	4	274	0	274	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTGTCCTGTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34141151	34142353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34141241_34141395_34141485_34142241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019338	chr5	-	793	3	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	20258	111447	20258	-111447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCACCATTCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	34286935	34276229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_34276343_34279949_34280141_34286446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019339	chr5	-	527	2	NNC	ENSMUSG00000045102.13	novel	2736	24	NA	NA	20270	-115312	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGGCAACAGCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34286923	34280094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_34280141_34286442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019340	chr5	-	696	3	ISM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	11	121675	11	-121675	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCCAAGGAGGTTAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	34307182	34286457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_34286939_34290441_34290535_34307060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019341	chr5	-	863	3	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	3170	35	3170	-35	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAGAGTTCTAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	34323701	34311258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_34311451_34320866_34321096_34323259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019342	chr5	-	1079	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	1486	12034	1486	-12034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGTCATTGCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34325385	34323257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_34323700_34324748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019343	chr5	-	677	2	ISM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	114	13911	114	-13911	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATGATATTCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	34326757	34325134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_34325788_34326733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019344	chr5	+	1861	3	ISM	ENSMUSG00000029110.14	ENSMUST00000182047.2	2944	8	12978	544	12978	-544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTATGTGAAAAGAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	34507253	34510224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34507416_34508133_34508183_34508574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019345	chr5	+	1695	1	Genic_Genomic	ENSMUSG00000029110.14	novel	NA	NA	NA	NA	14814	1	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTTATTCAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	34509089	34510784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_34509100_34510800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019346	chr5	+	352	2	ISM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	338	75681	338	-74972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGGACTGTGGAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	34527614	34568119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34527772_34567924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019347	chr5	+	565	3	ISM	ENSMUSG00000037210.17	ENST00000637812.2	5545	21	40656	65507	-10200	-64798	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACAGGTTGCCCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	34567927	34578293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34568172_34577344_34577500_34578127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019348	chr5	+	306	2	ISM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	57	59307	57	-59286	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCAGCACGATCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	34578184	34583805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34578296_34583610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019349	chr5	+	295	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	-17	54503	-17	-54503	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCAGATCAGGTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34583663	34588588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34583846_34588475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019350	chr5	+	199	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	4876	49142	4876	-49142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTTGAGGCACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	34588556	34593949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34588601_34593794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019351	chr5	+	436	3	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	12972	45157	12972	-45157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGTGACTTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	34596652	34597934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34596733_34597464_34597578_34597691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019352	chr5	+	399	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	14009	42293	14009	-42293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGAGTGTGGCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34597689	34600798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34597935_34600644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019353	chr5	+	289	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	16964	42034	16964	-42034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGTAATGTGAACACTCC	NA	NA	NA	NA	NA	NA	NA	NA	34600644	34601057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34600799_34600922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019354	chr5	+	435	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	17240	40833	17240	-40833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCAGGGCAGGAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	34600920	34602258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34601103_34602005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019355	chr5	+	267	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	18510	27643	18510	-27643	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAATTCATTAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	34602190	34615448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34602258_34615248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019356	chr5	+	419	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	31614	26484	31614	-26484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCAGAAGACCACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	34615294	34616607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34615448_34616341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019357	chr5	+	342	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	32767	24496	32767	-24496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCCAAAACTGCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	34616447	34618595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34616633_34618438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019358	chr5	+	698	3	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	34758	21543	34758	-21543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGACAGCCCGCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	34618438	34621548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34618722_34619427_34619612_34621317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019359	chr5	+	460	2	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	37636	19946	37636	-19946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTCCAGGCAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	34621316	34623145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34621549_34622917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019360	chr5	+	539	3	ISM	ENSMUSG00000037210.17	ENSMUST00000094867.8	3696	17	39846	-98	39846	77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGTGTAGGGCGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	34623526	34643189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34623792_34633069_34633152_34642997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019361	chr5	+	302	1	ISM	ENSMUSG00000037210.17	ENST00000637812.2	5545	21	116227	0	59818	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34643498	34643800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34643500_34643800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019362	chr5	+	140	2	ISM	ENSMUSG00000029106.15	ENSMUST00000052836.14	2337	15	4582	20541	4582	-20541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACCCTTTTCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	34763267	34767619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34763324_34767535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019363	chr5	+	1223	3	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	51403	875	23934	617	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGTCTAACTGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	34782619	34788777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34782780_34785758_34785858_34787813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019364	chr5	+	1037	1	ISM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	57608	0	29930	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	34788615	34789652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_34788600_34789700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019365	chr5	+	1147	3	ISM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	977	12958	977	-12958	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCAGGATCCTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35123227	35176821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_35124100_35132560_35132678_35176663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019366	chr5	+	897	4	ISM	ENSMUSG00000029101.17	ENSMUST00000114281.8	3439	14	29478	1156	29351	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCCAGGTTCTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	35185878	35189779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_35185977_35187354_35187435_35187811_35187966_35189214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019367	chr5	+	743	1	ISM	ENSMUSG00000029101.17	ENSMUST00000030984.14	5472	17	83256	152	33517	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGACTGGCTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	35190044	35190787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_35190000_35190800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019368	chr5	+	352	2	ISM	ENSMUSG00000044716.13	ENSMUST00000114270.8	2779	7	20342	1646	20127	-1646	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGCCGGCAGCAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	35234547	35236662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_35234612_35236374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019369	chr5	+	349	1	ISM	ENSMUSG00000044716.13	ENSMUST00000101298.9	2443	5	23850	0	23539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGCCTTGTTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	35237959	35238308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_35238000_35238300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019370	chr5	-	550	1	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	13716	0	13716	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGGAAAATGACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35249394	35248844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_35248800_35249400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019371	chr5	-	898	4	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	8105	1379	8105	-1379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGCATTTCCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35255005	35250223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019372	chr5	-	780	5	ISM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	37	6048	37	-6048	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGCTCCACCACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35263073	35254892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019373	chr5	-	1245	3	ISM	ENSMUSG00000029096.16	ENSMUST00000087629.10	2750	9	24190	0	23880	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTCCCCCACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	35812936	35809366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_35810467_35811414_35811511_35812887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019374	chr5	-	688	1	ISM	ENSMUSG00000029096.16	ENSMUST00000114233.3	1901	7	17226	0	17226	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAATCTAAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	35819590	35818902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_35818900_35819600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019375	chr5	-	1958	3	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	11619	4530	11619	-4530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGTGCTGGCAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35864828	35859191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_35859346_35860694_35860876_35863205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019376	chr5	-	1698	2	NNC	ENSMUSG00000036553.17	novel	3782	14	NA	NA	8216	-8597	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTACTACGAGTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	35868231	35863258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_35864917_35868191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019377	chr5	-	2061	4	ISM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	4001	8616	4001	-8616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCCGCAGCAGGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	35872446	35863277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_35864917_35868189_35868339_35871406_35871603_35872369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019378	chr5	+	1087	1	ISM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	109518	0	67287	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGAGTCGTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	36160180	36161267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_36160200_36161300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019379	chr5	+	493	3	ISM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	1	3406	1	-3406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATATGGTAAGCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	36622342	36628018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_36622600_36626781_36626945_36627945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019380	chr5	+	531	3	ISM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	4456	2723	4456	-2723	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACCCTGAGGCCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36626797	36628701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_36626945_36627945_36628028_36628399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019381	chr5	+	321	1	ISM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	8762	0	8762	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTTAAGCACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	36631103	36631424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_36631100_36631400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019382	chr5	-	433	2	FSM	ENSMUSG00000029190.20	ENSMUST00000140653.2	2014	2	1	1580	1	-1580	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCGCCCTGTCTGTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	36853367	36830322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_36830587_36853198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019383	chr5	-	1172	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	104	-3	104	3	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCCTTCTGGAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	36905890	36904718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_36904700_36905900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019384	chr5	-	507	1	Genic_Genomic	ENSMUSG00000055302.6	novel	NA	NA	NA	NA	1402	3	mono-exon	FALSE	NA	NA	NA	NA	NA	525	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGTTTAGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36952714	36952207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_36952200_36952700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019385	chr5	-	983	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	88	577	88	-577	multi-exon	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGGCAGAAGAGACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	36954028	36952787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_36953289_36953546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019386	chr5	-	235	1	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	23498	0	23498	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCATGTTCAAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	36964499	36964264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_36964300_36964500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019387	chr5	-	235	2	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	21534	864	21534	-864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGGTCCTAGCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	36966463	36965128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_36965248_36966347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019388	chr5	-	338	2	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	14459	8471	14459	-8471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGATGAATGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	36973538	36972735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_36972938_36973402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019389	chr5	-	253	2	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	13030	9138	13030	-9138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGGCGAGAAGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	36974967	36973402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_36973588_36974899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019390	chr5	-	252	2	ISM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	8730	13995	8730	-13995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACCACCAGGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36979267	36978259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_36978425_36979180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019391	chr5	-	112	2	ISM	ENSMUSG00000039474.14	ENSMUST00000166339.8	3284	8	11984	9463	11984	-9463	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAGCTGCTCAGCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	37134293	37132913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_37132960_37134227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019392	chr5	+	899	3	ISM	ENSMUSG00000063646.19	ENST00000282924.9	2415	13	12	33676	12	-33676	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTGAACTCTCTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	37185802	37248965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_37185944_37242579_37242843_37248470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019393	chr5	+	897	3	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	-95	47188	-95	-24484	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGACATGGCGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	37242618	37258157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_37242843_37248470_37248966_37257979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019394	chr5	+	792	4	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5875	43104	5875	-20400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGCATCCAGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	37248588	37262241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019395	chr5	-	301	1	ISM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	3798	0	3798	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGGTTTAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	37978129	37977828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_37977800_37978100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019396	chr5	-	473	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	507	955	507	-955	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTTGCCGCCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	37981420	37978783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_37979045_37981208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019397	chr5	-	309	2	NNC	ENSMUSG00000048450.11	novel	1935	2	NA	NA	438	-1278	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCAAGCACAAGACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	37981489	37979106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_37979135_37981208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019398	chr5	+	245	2	ISM	ENSMUSG00000029125.15	ENSMUST00000042146.15	1473	10	61	44254	61	-44248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTACAGGTAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	38196655	38249913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_38196844_38249856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019399	chr5	+	172	2	ISM	ENSMUSG00000029125.15	ENSMUST00000042146.15	1473	10	53260	31844	53260	-31838	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAGAACAGAAGGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	38249854	38262323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_38249925_38262221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019400	chr5	+	147	2	ISM	ENSMUSG00000029125.15	ENSMUST00000031008.13	1471	11	67329	29925	67311	-29925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTATTGCTGCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	38263905	38264236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_38263986_38264169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019401	chr5	+	235	3	ISM	ENSMUSG00000029125.15	ENSMUST00000042146.15	1473	10	67575	15558	67575	-15552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGATGAGCTGTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	38264169	38278609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_38264237_38273428_38273542_38278554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019402	chr5	+	343	4	ISM	ENSMUSG00000029125.15	ENSMUST00000042146.15	1473	10	87680	429	87680	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGCACCACGTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	38284274	38293738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_38284335_38285387_38285458_38292565_38292647_38293606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019403	chr5	-	1696	1	Genic_Genomic	ENSMUSG00000029126.8	novel	NA	NA	NA	NA	20148	4	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTCTGTACTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	38296227	38294531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_38294500_38296200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019404	chr5	-	2554	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	27	0	27	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGACTGTCTGTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	38317224	38294535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019405	chr5	+	217	1	Genic_Genomic	ENSMUSG00000029125.15	novel	NA	NA	NA	NA	98303	5	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGGACTTAGATATTC	NA	NA	NA	NA	NA	NA	NA	NA	38294897	38295114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_38294900_38295100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019406	chr5	+	1290	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTAATGCAAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	38417529	38426978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019407	chr5	+	1090	4	ISM	ENSMUSG00000051596.16	ENST00000612102.1	1598	5	21	2679	21	-2679	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTCATCATCGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	38434934	38457554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_38435169_38445240_38445378_38455200_38455332_38456966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019408	chr5	+	613	2	ISM	ENSMUSG00000051596.16	ENST00000612102.1	1598	5	20278	2794	20278	-2794	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCTCTCCTGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	38455191	38457439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_38455332_38456966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019409	chr5	+	790	2	ISM	ENSMUSG00000051596.16	ENST00000615738.1	1602	5	22342	0	22342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTCCTCATGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	38457255	38460237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_38457875_38460066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019410	chr5	+	168	1	NIC	ENSMUSG00000051596.16	novel	3109	7	NA	NA	25152	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCTGAGTCCTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	38460065	38460233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_38460100_38460200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019411	chr5	-	555	1	Genic_Genomic	ENSMUSG00000005103.13	novel	NA	NA	NA	NA	34271	3	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCACTGGCTCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	38684707	38684152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_38684200_38684700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019412	chr5	-	944	4	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	30506	-184	30506	184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGGAGCCGCTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	38688472	38684745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019413	chr5	-	678	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	26292	1938	26292	-1938	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTCCCACCCTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	38692686	38686867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019414	chr5	-	407	3	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	21049	9550	21049	-9550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTGACTGGGAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38697929	38694479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_38694570_38697355_38697590_38697846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019415	chr5	-	711	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	14538	12443	14538	-12443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCGGGTCATCAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	38704440	38697372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019416	chr5	-	541	5	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	10206	12917	10206	-12917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACGAAAATGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	38708772	38697846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019417	chr5	-	538	4	ISM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	434	18091	434	-18091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAAGTGAGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	38718544	38703020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_38703198_38704286_38704435_38708719_38708811_38718422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019418	chr5	-	653	4	ISM	ENSMUSG00000005103.13	ENSMUST00000005234.13	3089	15	1	20129	1	-19355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCGTTCCCCTCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38719148	38704284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_38704435_38708719_38708811_38718422_38718545_38718858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019419	chr5	-	1689	2	FSM	ENSMUSG00000051022.8	ENSMUST00000053116.7	1684	2	-5	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTTGCTCCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	39801982	39771281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_39772748_39801759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019420	chr5	+	568	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGTCACATTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	40487460	40488028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr5_+_40487500_40488000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019421	chr5	-	439	1	Genic_Genomic	ENSMUSG00000029128.13	novel	NA	NA	NA	NA	82708	1	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTGGGATTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	41782756	41782317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_41782300_41782800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019422	chr5	-	584	4	ISM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	20375	544	20342	-541	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCATGTTGCTTCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	41845122	41782862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019423	chr5	-	415	2	ISM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	81036	571	81036	-568	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGACTGCCTCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	41784428	41782889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_41783206_41784329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019424	chr5	-	407	4	ISM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	4585	10845	4585	-10842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAGGAGACTCTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	41860879	41793163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_41793253_41845063_41845194_41855732_41855822_41860780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019425	chr5	-	551	4	ISM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	15	62745	15	-62742	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTTACTACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	41865482	41845063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_41845194_41855732_41855822_41860780_41860878_41865247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019426	chr5	+	1183	1	FSM	ENSMUSG00000105416.2	ENSMUST00000196390.2	1629	1	448	-2	448	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTCTTGGTCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	43217045	43218228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_43217000_43218200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019427	chr5	+	1544	3	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	318	41545	318	-41545	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATGAGAGCAGAGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	43391229	43401988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43392432_43394649_43394932_43401928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019428	chr5	+	930	3	ISM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	47802	-161	47802	161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGTGAAGATGGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	43438713	43443694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43438829_43441279_43441462_43443061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019429	chr5	+	942	1	ISM	ENSMUSG00000039782.16	ENSMUST00000169035.8	7050	11	55613	0	55214	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGTAATCTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	43446125	43447067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43446100_43447100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019430	chr5	+	512	4	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	1864	52717	1864	-52717	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGAGCCTGTGAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	43840494	43845591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43840544_43841381_43841556_43842599_43842763_43845465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019431	chr5	+	474	3	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	21944	34793	21944	-34793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTGGACAGATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	43860574	43863515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43860690_43861202_43861445_43863398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019432	chr5	+	552	3	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	22590	34074	22590	-34074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTGGTAAGCAAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	43861220	43864234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43861445_43863398_43863577_43864084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019433	chr5	+	435	4	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	41097	14645	41097	-14645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTACCATTGAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	43879727	43883663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43879841_43881042_43881140_43881615_43881715_43883537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019434	chr5	+	455	3	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	42983	10933	42983	-10933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCCAACAACCCGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	43881613	43887375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43881715_43883537_43883715_43887198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019435	chr5	+	487	2	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	58007	-6	58007	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTAGTCTGTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43896637	43898314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_43896818_43898007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019436	chr5	-	639	1	ISM	ENSMUSG00000039753.17	ENSMUST00000119523.8	2801	11	36889	1	36848	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	43902596	43901957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_43902000_43902600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019437	chr5	-	1425	3	ISM	ENSMUSG00000039753.17	ENSMUST00000196483.5	2814	11	23265	107	23258	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGCTGTCCCTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	43916186	43902064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_43902718_43908203_43908353_43915563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019438	chr5	-	830	3	ISM	ENSMUSG00000039753.17	ENSMUST00000121736.6	2144	9	21280	464	21245	-464	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTACATTGCCCAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	43918199	43915690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_43916287_43917084_43917168_43918048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019439	chr5	-	672	4	ISM	ENSMUSG00000039753.17	ENSMUST00000121736.6	2144	9	8485	7427	8450	-7427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGGTAAATGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	43930994	43922653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_43922834_43925405_43925593_43928078_43928175_43930785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019440	chr5	+	794	1	FSM	ENSMUSG00000033036.10	ENSMUST00000122204.3	774	1	7	-27	4	27	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTCCAATGCCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44070492	44071286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_44070500_44071300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019441	chr5	+	1368	1	FSM	ENSMUSG00000105263.2	ENSMUST00000200473.2	5292	1	3926	-2	3926	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	44299247	44300615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_44299200_44300600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019442	chr5	-	1314	1	ISM	ENSMUSG00000039706.12	ENSMUST00000199534.5	2541	9	326161	13	326144	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGTAAGTGAATCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	44630800	44629486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_44629500_44630800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019443	chr5	-	1375	2	ISM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	320402	415	320355	-415	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAAATGGACCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44636589	44629901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_44631122_44636434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019444	chr5	-	365	3	ISM	ENSMUSG00000015806.13	ENST00000508623.5	564	5	5370	-1	3427	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGCCCTCTCGAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	45602088	45591896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_45592021_45600778_45600920_45601988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019445	chr5	-	124	1	NIC	ENSMUSG00000015806.13	novel	1172	6	NA	NA	13494	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGCCCTCTCGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	45592021	45591897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_45591900_45592000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019446	chr5	-	442	4	ISM	ENSMUSG00000015806.13	ENST00000508623.5	564	5	-1	8881	-1	-8881	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTTCATTTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	45607459	45600778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_45600920_45601988_45602086_45604917_45605011_45607348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019447	chr5	-	230	2	NNC	ENSMUSG00000015806.13	novel	564	5	NA	NA	3436	-8881	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTTCATTTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	45602079	45600778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_45600920_45601990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019448	chr5	+	2749	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	13	1798	13	-1798	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGCACTTTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	45677583	45684820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019449	chr5	+	324	2	ISM	ENSMUSG00000015804.15	ENSMUST00000118833.3	734	3	2131	230	2131	-191	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTTGGAAGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	45679775	45682749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45679845_45682494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019450	chr5	+	318	1	ISM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	5092	3638	5018	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTAGACTGTTAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	45682662	45682980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45682700_45683000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019451	chr5	+	2410	1	Genic_Genomic	ENSMUSG00000015804.15	novel	NA	NA	NA	NA	6566	2	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTGTCTTCAGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	45684210	45686620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_45684200_45686600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019452	chr5	+	339	2	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	1100	28140	1100	-28140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAAAGATAAGATTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	45828360	45829748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45828566_45829614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019453	chr5	+	379	3	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	6038	22156	6038	-22156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACCTTCATTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45833298	45835732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45833484_45833933_45834084_45835688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019454	chr5	+	346	3	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	9927	18684	9927	-18684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGACTGAGCAACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	45837187	45839204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45837314_45838713_45838798_45839068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019455	chr5	+	372	2	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	21681	7245	21681	-7245	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGTGTTTTTCCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	45848941	45850643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45849169_45850498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019456	chr5	+	330	2	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	23259	6626	23259	-6626	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGGTATATATGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	45850519	45851262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45850681_45851093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019457	chr5	+	449	3	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	23857	4378	23857	-4378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATATACTGACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	45851117	45853510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45851269_45852995_45853158_45853374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019458	chr5	+	375	2	ISM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	28943	373	28943	-373	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCCTAAATTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	45856203	45857515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_45856253_45857189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019459	chr5	+	358	1	Genic_Genomic	ENSMUSG00000015880.14	novel	NA	NA	NA	NA	30271	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACAGTTGTTCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45857531	45857889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_45857500_45857900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019460	chr5	+	188	1	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAAATCAACTGATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	46572581	46572769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr5_+_46572600_46572800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019461	chr5	+	2240	3	ISM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	319147	0	319147	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTTGGCCCTTTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	48459645	48463118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_48459897_48460094_48460307_48461341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019462	chr5	-	1401	1	FSM	ENSMUSG00000106607.2	ENSMUST00000197257.2	1386	1	3	-18	3	18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGACATGTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	52333094	52331693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_52331700_52333100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019463	chr5	+	113	1	NIC	ENSMUSG00000097145.6	novel	437	3	NA	NA	3682	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGGGACCAGATACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	52351736	52351849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_52351700_52351800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019464	chr5	+	694	2	FSM	ENSMUSG00000072941.6	ENSMUST00000101208.6	3738	2	-2	3046	-2	-3046	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGATTCCACCGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	52521130	52525714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_52521395_52525284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019465	chr5	+	488	1	Genic_Genomic	ENSMUSG00000072941.6	novel	NA	NA	NA	NA	7146	6	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAGAAAATCGAGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	52528278	52528766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_52528300_52528800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019466	chr5	+	609	3	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	126	18530	90	-18530	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGAGCTTGCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	52899041	52908152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_52899311_52905710_52905848_52907949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019467	chr5	+	626	4	ISM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	6793	16091	6757	-16091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGGCTTCTCTCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	52905708	52910591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_52905848_52907949_52908151_52908763_52908896_52910437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019468	chr5	+	668	2	ISM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	20812	1160	20812	-1160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTTGTAGACTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	52919763	52925522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_52919834_52924924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019469	chr5	+	631	1	Genic_Genomic	ENSMUSG00000029186.13	novel	NA	NA	NA	NA	27101	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTTCTGTGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	52926052	52926683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_52926100_52926700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019470	chr5	-	735	1	ISM	ENSMUSG00000029189.11	ENST00000399878.8	4511	24	105634	0	92655	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCAGGAAGTGGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53265159	53264424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_53264400_53265200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019471	chr5	-	960	4	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	83337	-403	83337	403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTAGAGGTCATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	53274477	53264829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_53265517_53273504_53273578_53273663_53273767_53274380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019472	chr5	-	822	3	ISM	ENSMUSG00000029189.11	ENST00000502949.5	3382	23	3	78057	3	-78057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCAACAGAGCCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	53357811	53343289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_53343416_53345297_53345425_53357242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019473	chr5	-	971	3	ISM	ENSMUSG00000029189.11	ENST00000399878.8	4511	24	9	80913	9	-80105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGAGGCCACTCGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	53370784	53345337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_53345425_53357242_53357814_53370471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019474	chr5	+	416	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	127	379	127	-379	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGAGCAGAGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	53424606	53435503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_53424701_53434484_53434542_53435238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019475	chr5	+	371	1	ISM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	11032	0	11032	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	53435511	53435882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53435500_53435900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019476	chr5	+	220	3	ISM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	52	17742	52	-17614	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTCTTCATGCAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	53773745	53793350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53773880_53784724_53784764_53793303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019477	chr5	+	323	2	ISM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	25679	7717	25679	-7589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTGACTGTACGTATG	NA	NA	NA	NA	NA	NA	NA	NA	53799372	53803375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53799532_53803211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019478	chr5	+	211	2	ISM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	29550	4312	29550	-4184	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTGCATGTAGAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	53803243	53806780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53803387_53806712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019479	chr5	+	208	2	ISM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	33031	4006	33031	-3878	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGACTGGCATGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	53806724	53807086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53806851_53807004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019480	chr5	+	227	2	ISM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	33314	2294	33314	-2166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAAGAATAATCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	53807007	53808798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53807118_53808681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019481	chr5	+	366	3	ISM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	35023	565	35023	-437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGATAGAGCCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	53808716	53810527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53808823_53809948_53810105_53810423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019482	chr5	+	235	2	ISM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	36740	305	36740	-177	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACACACCAGAGCCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	53810433	53810787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53810528_53810646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019483	chr5	+	178	1	ISM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	97740	3607	37222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGTGCAGGTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	53810915	53811093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53810900_53811100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019484	chr5	+	248	2	ISM	ENSMUSG00000039178.10	ENST00000264866.9	2228	20	21	74538	21	-73987	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTGTAAAGTACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	53967022	53986761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_53967201_53986691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019485	chr5	+	148	2	ISM	ENSMUSG00000039178.10	ENST00000511789.5	1382	17	50384	31069	50384	-31069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACATTTAAATAATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	54017485	54029679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_54017549_54029594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019486	chr5	+	303	3	ISM	ENSMUSG00000039178.10	ENST00000511789.5	1382	17	77593	6316	77593	-6316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAATACTTGCTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	54044694	54054432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_54044806_54046657_54046750_54054332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019487	chr5	+	255	2	ISM	ENSMUSG00000039178.10	ENST00000511789.5	1382	17	91816	-108	91816	108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCCCTCCTCCGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	54058917	54060856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_54058990_54060673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019488	chr5	+	237	1	Genic_Genomic	ENSMUSG00000039178.10	novel	NA	NA	NA	NA	93973	4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTCTAATAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	54061074	54061311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_54061100_54061300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019489	chr5	+	872	2	ISM	ENSMUSG00000039156.20	ENST00000467011.6	3833	12	117487	1020	117442	-1020	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAACTGACTACGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	54273348	54276258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_54273576_54275613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019490	chr5	+	2060	1	ISM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	120499	0	120433	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTGGTTTTTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	54276339	54278399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_54276300_54278400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019491	chr5	-	471	1	FSM	ENSMUSG00000105143.2	ENSMUST00000197887.2	154	1	110	-427	110	427	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGAGAAAATCAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	54809353	54808882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_54808900_54809400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019492	chr5	+	370	1	Genic_Genomic	ENSMUSG00000106326.2	novel	NA	NA	NA	NA	75933	280	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATTGAGATATAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	56647484	56647854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_56647500_56647900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019493	chr5	+	213	1	FSM	ENSMUSG00000104892.2	ENSMUST00000199426.2	631	1	421	-3	421	3	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTGTAGTTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	57617922	57618135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_57617900_57618100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019494	chr5	+	302	2	Genic_Genomic	ENSMUSG00000051116.7	novel	499	1	NA	NA	-8	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTACTGTCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	57765902	57766417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_57766013_57766225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019495	chr5	+	224	2	Genic_Genomic	ENSMUSG00000051116.7	novel	499	1	NA	NA	12	-45	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGCGTGACAGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	57765922	57766364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_57766008_57766225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019496	chr5	+	203	2	Genic_Genomic	ENSMUSG00000051116.7	novel	499	1	NA	NA	50	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGATCTTCTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	57765960	57766386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_57766003_57766225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019497	chr5	+	243	1	FSM	ENSMUSG00000051116.7	ENSMUST00000153583.3	499	1	365	-109	365	109	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAACCCTGAGATTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	57766275	57766518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_57766300_57766500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019498	chr5	-	1124	2	FSM	ENSMUSG00000097216.4	ENST00000660555.1	2300	2	1176	0	-556	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTGATCCTCCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	57875818	57873913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_57874407_57875187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019499	chr5	-	495	1	NIC	ENSMUSG00000097216.4	novel	2300	2	NA	NA	854	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTGATCCTCCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	57874408	57873913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_57873900_57874400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019500	chr5	+	387	2	NNC	ENSMUSG00000090326.3	novel	2264	9	NA	NA	117	-69673	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGACATGAGCTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	62969133	62975977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_62969425_62975881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019501	chr5	+	390	2	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	4837	66245	4837	-66244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAATTCAAAAGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	62976002	62979406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_62976213_62979226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019502	chr5	+	405	2	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	13194	48917	13194	-48916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTTAGAGAGGTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	62984359	62996734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_62984613_62996582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019503	chr5	+	383	2	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	25485	45205	25485	-45204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAGTATGAGGAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	62996650	63000446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_62996748_63000160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019504	chr5	+	372	2	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	28995	38498	28995	-38497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAATTTGGGAATTATA	NA	NA	NA	NA	NA	NA	NA	NA	63000160	63007153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_63000448_63007068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019505	chr5	+	368	2	ISM	ENSMUSG00000090326.3	ENSMUST00000170704.2	2427	9	68439	41	68439	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAATAAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	63039604	63045610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_63039665_63045302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019506	chr5	+	349	1	Genic_Genomic	ENSMUSG00000090326.3	novel	NA	NA	NA	NA	74145	8	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTCATGGATTTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	63045310	63045659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_63045300_63045700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019507	chr5	-	2634	3	ISM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	41670	-1	41670	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCAGTCTGCTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	64084570	64066238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_64068495_64082077_64082217_64084331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019508	chr5	+	545	1	FSM	ENSMUSG00000106205.2	ENSMUST00000198074.2	1722	1	1191	-14	1191	14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGATTTTCAAGTGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	64962547	64963092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_64962500_64963100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019509	chr5	+	306	2	ISM	ENSMUSG00000029178.15	ENST00000521506.1	984	5	-1	6989	-1	-6989	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCCATTAAGAAGTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	64974111	64979460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_64974174_64979216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019510	chr5	+	1547	4	ISM	ENSMUSG00000029178.15	ENSMUST00000166409.6	1562	6	9783	-493	5352	493	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAACTTGGCCGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	64979464	64987318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_64979701_64980221_64980373_64984452_64984614_64986319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019511	chr5	+	285	2	ISM	ENSMUSG00000029178.15	ENST00000521506.1	984	5	10343	0	10343	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGCTCTGACCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	64984455	64986449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_64984614_64986322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019512	chr5	+	1143	1	ISM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	28371	0	14989	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	NA	NA	NA	NA	NA	NA	NA	64989101	64990244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_64989100_64990200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019513	chr5	+	1425	4	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	61213	76	61213	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTCCTGAAACAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	65188626	65199153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65188738_65191714_65191788_65196030_65196085_65197966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019514	chr5	+	1202	1	Genic_Genomic	ENSMUSG00000029185.15	novel	NA	NA	NA	NA	70616	2	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTCCTTTCGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	65198029	65199231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_65198000_65199200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019515	chr5	+	1272	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	83	11620	5	-11620	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGCTATATAAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	65505739	65529730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65506580_65529298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019516	chr5	+	1486	3	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23655	4355	23577	-4355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGACTGGCGACTATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	65529311	65536995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65529804_65533022_65533292_65536270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019517	chr5	+	1638	2	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	30823	-4	30745	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGACTTCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	65536479	65541354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65537415_65540651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019518	chr5	-	507	5	ISM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	960	0	521	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65547827	65545706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019519	chr5	-	670	6	ISM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	393	0	18	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAGAAGATTTTACATG	NA	NA	NA	NA	NA	NA	NA	NA	65548330	65545820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019520	chr5	-	541	6	ISM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	-63	593	1	-593	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTATATTTGTCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	65548786	65546413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019521	chr5	+	438	4	ISM	ENSMUSG00000029199.12	ENST00000340169.7	978	9	-34	11145	-34	-11120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGGCCAAAGCAATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	65549561	65555037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65549733_65551283_65551378_65552707_65552789_65554945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019522	chr5	+	474	4	ISM	ENSMUSG00000029199.12	ENST00000261434.8	781	7	19	6083	19	-6058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAGAAGCTGAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	65549614	65560099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65549733_65552707_65552789_65557189_65557319_65559953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019523	chr5	+	936	6	FSM	ENSMUSG00000029199.12	ENST00000513731.6	675	6	71	-332	71	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATCTTATAAATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	65549666	65566489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_65549733_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019524	chr5	+	434	4	ISM	ENSMUSG00000029199.12	ENST00000261434.8	781	7	3106	4600	3106	-4575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATGTCTGAGTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	65552701	65561582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65552789_65557189_65557319_65559953_65560100_65561510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019525	chr5	+	457	1	ISM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	17212	1485	16499	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGTGTGTGTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	65566094	65566551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65566100_65566600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019526	chr5	-	533	1	Genic_Genomic	ENSMUSG00000029201.15	novel	NA	NA	NA	NA	22198	2	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAATTTACGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	65571094	65570561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_65570600_65571100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019527	chr5	-	847	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	18302	336	18302	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATGGGCTGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	65574990	65570899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019528	chr5	-	471	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	17338	3604	17338	-3604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCAGGATTCTAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	65575954	65574167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65574279_65574363_65574456_65574853_65574988_65575820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019529	chr5	-	588	5	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	13166	3813	13166	-3813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGTTTAAGGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	65580126	65574376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019530	chr5	-	773	5	NNC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	12299	-5257	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTGTTTTTTAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	65580993	65575820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_65575952_65577591_65577687_65579977_65580122_65580499_65580702_65580792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019531	chr5	-	681	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	8367	9927	8367	-9927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAACTAACTGCCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	65584925	65580490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65580702_65580792_65580994_65581384_65581487_65584758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019532	chr5	-	790	4	ISM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	3	10234	3	-10234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGGTATGAAGAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	65593289	65580797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65580994_65581384_65581487_65584758_65584928_65592966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019533	chr5	-	2374	1	ISM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	44183	0	11352	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTTTTCTGTTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	65606560	65604186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_65604200_65606600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019534	chr5	-	2775	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	525	1260	185	-1260	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGACTTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	65650218	65605446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019535	chr5	-	637	1	NIC	ENSMUSG00000037822.13	novel	4560	5	NA	NA	10130	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTTTAGAATCCATT	NA	NA	NA	NA	NA	NA	NA	NA	65607782	65607145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_65607100_65607800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019536	chr5	-	484	2	FSM	ENSMUSG00000037822.13	ENST00000511809.5	477	2	-5	-2	-5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGACAGAGCCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	65617917	65607347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_65607781_65617866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019537	chr5	-	471	2	NNC	ENSMUSG00000037822.13	novel	477	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTGACAGAGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	65617912	65607349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_65607775_65617866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019538	chr5	-	477	2	NNC	ENSMUSG00000037822.13	novel	477	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTGACAGAGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	65617914	65607349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_65607781_65617868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019539	chr5	-	477	2	NNC	ENSMUSG00000037822.13	novel	477	2	NA	NA	1	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGAGTGACAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	65617911	65607352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_65607781_65617862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019540	chr5	+	1084	3	ISM	ENSMUSG00000029203.17	ENSMUST00000201984.4	1449	5	54611	0	54418	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACATTAATTTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65749244	65753098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_65749319_65751762_65751892_65752217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019541	chr5	-	1275	1	FSM	ENSMUSG00000107050.2	ENSMUST00000202959.2	2331	1	1065	-9	1065	9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAGTTCATAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65838622	65837347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_65837300_65838600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019542	chr5	+	891	2	FSM	ENSMUSG00000029204.8	ENST00000610353.4	977	2	1	85	1	-85	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGAACAGCTGTCAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	66020852	66050230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_66021185_66049671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019543	chr5	-	619	2	Antisense	novelGene_ENSMUSG00000029204.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCGAAGTGAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	66050048	66020939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_66021168_66049657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019544	chr5	+	650	1	ISM	ENSMUSG00000029204.8	ENSMUST00000031106.8	5093	4	31111	3727	28489	1	mono-exon	FALSE	NA	NA	NA	NA	NA	1084	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGCCCAACATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	66049666	66050316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_66049700_66050300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019545	chr5	-	2013	1	ISM	ENSMUSG00000029207.17	ENSMUST00000162366.8	6540	16	318018	3	317923	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	66458083	66456070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_66456100_66458100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019546	chr5	-	2092	3	ISM	ENSMUSG00000029207.17	ENSMUST00000162349.8	3362	18	309478	-974	309470	974	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAGTGAACAGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	66466536	66458256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_66460053_66464877_66465058_66466420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019547	chr5	+	414	5	ISM	ENSMUSG00000029223.13	ENST00000503431.5	688	8	3379	2107	3379	-2107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCCCTGGAGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	66837002	66842174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019548	chr5	+	646	5	ISM	ENSMUSG00000029223.13	ENST00000284440.9	976	8	6160	0	6160	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATCAGCTGGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	66839783	66844569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019549	chr5	+	388	1	NIC	ENSMUSG00000029223.13	novel	1177	9	NA	NA	10558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATCAGCTGGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	66844181	66844569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_66844200_66844600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019550	chr5	+	376	3	ISM	ENSMUSG00000037736.21	ENST00000509638.5	1041	7	39	20922	39	-20922	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGGATACCTCCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	66903117	67111086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_66903349_67039241_67039312_67111011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019551	chr5	+	563	3	ISM	ENSMUSG00000037736.21	ENSMUST00000117601.8	3157	23	62697	79683	-7259	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGTGGTCCAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	67118499	67132008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_67118611_67126418_67126615_67131752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019552	chr5	+	257	1	NIC	ENSMUSG00000037736.21	novel	1041	7	NA	NA	5993	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGTGGTCCAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	67131751	67132008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_67131800_67132000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019553	chr5	+	1275	2	ISM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	23389	4121	23389	-4121	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGCATTCTGATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	67441536	67444683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_67441567_67443438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019554	chr5	+	1211	1	ISM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	29686	0	29446	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTTTAGAAATGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	67447593	67448804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_67447600_67448800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019555	chr5	+	1695	2	ISM	ENSMUSG00000029221.16	ENSMUST00000113676.6	5648	17	45697	2328	45697	-2328	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATGTAATAAAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	67509994	67513455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_67510109_67511874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019556	chr5	+	1675	1	ISM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	49814	0	49814	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTTTATCATATGCT	NA	NA	NA	NA	NA	NA	NA	NA	67514111	67515786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_67514100_67515800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019557	chr5	-	1177	4	ISM	ENSMUSG00000092060.5	ENST00000611697.1	1288	5	9558	-1	9558	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTCCAAAGCATGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	67575355	67555503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019558	chr5	-	1130	2	ISM	ENSMUSG00000029209.16	ENSMUST00000166298.8	1755	7	12674	-169	12674	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATCTCATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69735497	69732343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_69733297_69735320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019559	chr5	-	362	1	Genic_Genomic	ENSMUSG00000029209.16	novel	NA	NA	NA	NA	13728	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTAAGTTTCCACACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	69734443	69734081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_69734100_69734400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019560	chr5	-	762	3	ISM	ENSMUSG00000001260.11	ENST00000295452.5	1416	8	38831	-1	38831	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTATGTGACTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	70934618	70911246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_70911635_70931609_70931826_70934460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019561	chr5	-	2019	1	Genic_Genomic	ENSMUSG00000029213.12	novel	NA	NA	NA	NA	9597	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGACTCATGGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	72315935	72313916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_72313900_72315900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019562	chr5	-	2450	4	ISM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	2682	1335	2682	-1335	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGCTTGTCCTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	72322850	72315252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019563	chr5	+	1044	7	ISM	ENSMUSG00000046808.18	ENST00000504445.1	1305	8	20	7846	20	-7846	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGGGACTCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	72387636	72404648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019564	chr5	-	1307	1	ISM	ENSMUSG00000067220.13	ENSMUST00000201463.4	2510	8	14071	81	13990	8	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCCAGGGTCACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72762426	72761119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_72761100_72762400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019565	chr5	-	2071	4	ISM	ENSMUSG00000067220.13	ENST00000420489.7	2345	7	6802	0	6802	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAATGTACCCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	72769614	72761127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_72762873_72766797_72766905_72768151_72768260_72769503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019566	chr5	+	2232	2	ISM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	60232	829	60232	-829	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAAAATGTATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	73131943	73135325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_73132190_73133339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019567	chr5	+	2144	1	ISM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	62364	18	62299	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATTATTAAATCTATA	NA	NA	NA	NA	NA	NA	NA	NA	73134010	73136154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_73134000_73136200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019568	chr5	-	277	1	Genic_Genomic	ENSMUSG00000070733.14	novel	NA	NA	NA	NA	127707	19	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACTATAGATGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	73177772	73177495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_73177500_73177800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019569	chr5	-	325	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	125500	897	125500	-897	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGCAGTCATATCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	73179979	73179450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73179641_73179844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019570	chr5	-	302	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	124138	1291	124138	-1291	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCAGGAAGAGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	73181341	73179844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73180036_73181230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019571	chr5	-	315	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	112980	12431	112980	-12431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCTGTTCTGAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	73192499	73190984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73191089_73192288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019572	chr5	-	452	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	106541	13741	106541	-13741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCAGTGGACATTA	NA	NA	NA	NA	NA	NA	NA	NA	73198938	73192294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73192497_73198688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019573	chr5	-	319	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	100483	20198	100483	-20198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTGAAAGAGCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	73204996	73198751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73198937_73204862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019574	chr5	-	360	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	93929	29090	93929	-29090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATCTCACCTCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	73211550	73207643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73207849_73211395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019575	chr5	-	339	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	93259	32917	93259	-32917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAACAGCAGTGAGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	73212220	73211470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73211573_73211872_73211948_73212058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019576	chr5	-	332	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	90340	33606	90340	-33606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGTGATCGCAGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	73215139	73212159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73212221_73212867_73213066_73215066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019577	chr5	-	352	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	75254	49894	75254	-49894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACCGGGCGGCTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	73230225	73228447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73228653_73230078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019578	chr5	-	312	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	65198	59752	65198	-59752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCCCGCCCACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	73240281	73238305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73238476_73240139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019579	chr5	-	303	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	57507	67156	57507	-67156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAACCATACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	73247972	73245709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73245823_73246437_73246599_73247943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019580	chr5	-	318	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	52660	69398	52660	-69398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCGGGTAGGGTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	73252819	73247951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73248117_73250465_73250558_73252758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019581	chr5	-	332	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	49754	76251	49754	-76251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCAGCACCCGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	73255725	73254804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73254913_73255501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019582	chr5	-	330	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	48108	76970	48108	-76970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCCCCAGGTGGATATA	NA	NA	NA	NA	NA	NA	NA	NA	73257371	73255523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73255771_73257288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019583	chr5	-	331	2	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	46443	79170	46443	-79170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTCTGTAGCAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	73259036	73257723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73257815_73258796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019584	chr5	-	330	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	40049	80384	40049	-80384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTTTGTATATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	73265430	73258937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73259035_73262017_73262126_73265305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019585	chr5	-	319	3	ISM	ENSMUSG00000070733.14	ENSMUST00000094700.11	9852	60	35663	87310	35663	-87310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGATTTTTCTCAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	73269816	73265863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73265985_73267528_73267616_73269705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019586	chr5	-	333	2	ISM	ENSMUSG00000070733.14	ENSMUST00000101127.12	11340	63	52	200586	29	-199697	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCTGTGTACTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	73413910	73378250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73378416_73413742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019587	chr5	+	1142	5	ISM	ENSMUSG00000029152.14	ENST00000509122.5	916	7	9300	-336	9300	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTCTTTTTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	73460932	73471412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019588	chr5	+	966	3	ISM	ENSMUSG00000029152.14	ENST00000509122.5	916	7	12278	-336	12278	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTCTTTTTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	73463910	73471412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_73464097_73467616_73467770_73470785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019589	chr5	+	1201	1	FSM	ENSMUSG00000107331.2	ENSMUST00000202887.2	1197	1	6	-10	6	10	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCTTTATTTGGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	73468712	73469913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_73468700_73469900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019590	chr5	-	1732	2	ISM	ENSMUSG00000029153.12	ENSMUST00000200830.4	2384	6	12585	0	12195	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGCTGGCTTTTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73483706	73479541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73481191_73483623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019591	chr5	-	1488	1	Genic_Genomic	ENSMUSG00000029156.12	novel	NA	NA	NA	NA	13555	1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTTCTTCGTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	73791578	73790090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_73790100_73791600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019592	chr5	-	1888	4	ISM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	7017	1477	7017	-1477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGGTGCTAACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	73798116	73791568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019593	chr5	+	2340	1	FSM	ENSMUSG00000106943.3	ENSMUST00000066220.4	2346	1	8	-2	8	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAGACAGGAAAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	74253728	74256068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_74253700_74256100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019594	chr5	+	651	1	ISM	ENSMUSG00000049907.9	ENSMUST00000051937.9	1812	4	3545	0	3545	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGACTGGGTCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	74359491	74360142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_74359500_74360100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019595	chr5	+	529	3	ISM	ENSMUSG00000029227.16	ENST00000306932.10	1865	15	56362	8	56362	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	74752570	74756806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_74752655_74755734_74755873_74756499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019596	chr5	+	732	1	ISM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	62598	0	62521	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCATTACCCTGACTGC	NA	NA	NA	NA	NA	NA	NA	NA	74758729	74759461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_74758700_74759500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019597	chr5	-	329	1	NIC	ENSMUSG00000029229.9	novel	9699	6	NA	NA	37528	16	mono-exon	FALSE	NA	NA	NA	NA	NA	246	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTCGAACTTAGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	75167431	75167102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_75167100_75167400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019598	chr5	-	693	5	FSM	ENSMUSG00000029229.9	ENST00000512964.5	696	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATTCTCAAAAAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	75204956	75167118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_75167425_75171891_75171952_75187728_75187885_75188021_75188077_75204840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019599	chr5	+	804	4	FSM	ENSMUSG00000029233.16	ENST00000264228.9	732	4	1	-73	1	73	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGCGGGAATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	76295537	76302702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_76295676_76297599_76297798_76301370_76301506_76302369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019600	chr5	+	727	4	NNC	ENSMUSG00000029233.16	novel	732	4	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGGCTTTATGGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	76295546	76302630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_76295676_76297599_76297802_76301370_76301506_76302369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019601	chr5	+	446	1	ISM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	14763	0	7073	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGGACTGGGTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	76302880	76303326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_76302900_76303300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019602	chr5	-	348	2	ISM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	74191	17232	43655	-15556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTACCCAGAGTGCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	76378204	76377255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_76377411_76378011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019603	chr5	-	437	1	FSM	ENSMUSG00000106831.2	ENSMUST00000201768.2	459	1	22	0	22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGATCAGATCATCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	76380895	76380458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_76380500_76380900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019604	chr5	-	103	2	ISM	ENSMUSG00000029236.5	ENST00000511469.5	312	6	19621	21	19621	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGAAGAGATTCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	76491820	76488626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_76488678_76491768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019605	chr5	-	110	2	ISM	ENSMUSG00000029236.5	ENST00000511469.5	312	6	5195	4679	5195	-4679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTCTGCTTAAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	76506246	76493284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_76493346_76506197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019606	chr5	+	123	2	ISM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	3448	34694	3448	-34692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAATCCGACAAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76680652	76683440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_76680736_76683400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019607	chr5	+	123	2	ISM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	8432	28182	8432	-28180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAGTACCAAGAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	76685636	76689952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_76685705_76689897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019608	chr5	+	153	2	ISM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	12815	26746	12815	-26744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACTGAAACTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76690019	76691388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_76690086_76691301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019609	chr5	+	158	2	ISM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	15929	20755	15929	-20753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCTATGCCAAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	76693133	76697379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_76693211_76697298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019610	chr5	+	109	2	ISM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	30403	9914	30403	-9912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTGGCACCCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	76707607	76708220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_76707673_76708176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019611	chr5	+	127	2	ISM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	31002	8916	31002	-8914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTAGATAGCTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	76708206	76709218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_76708254_76709138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019612	chr5	+	1327	1	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	77085949	77087276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr5_+_77085900_77087300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019613	chr5	+	740	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	106	7819	106	-7819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCTTTCTGTGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	77099320	77107341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77099683_77104392_77104591_77107161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019614	chr5	+	367	2	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	260	-10606	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCAGCTGCATATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	77099474	77104554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_77099683_77104395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019615	chr5	+	501	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	5234	6024	5234	-6024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTAATAAAATAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	77104448	77109136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77104591_77107161_77107341_77108956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019616	chr5	+	435	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	7985	5807	7985	-5807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGTATTCGAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	77107199	77109353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77107341_77108956_77109137_77109239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019617	chr5	+	566	4	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	9736	2690	9736	-2690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTTTAAATGCCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	77108950	77112470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77109137_77109239_77109354_77110273_77110358_77112288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019618	chr5	+	429	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	11057	905	11057	-905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTTGAAAATTTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	77110271	77114255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77110358_77112288_77112470_77114093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019619	chr5	+	700	3	ISM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	13080	300	13080	-300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCACTCCAGAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	77112294	77114860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77112470_77114093_77114253_77114494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019620	chr5	+	389	1	ISM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	15771	2	15751	2	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCGCTGTGTGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	77114965	77115354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77115000_77115400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019621	chr5	+	751	2	ISM	ENSMUSG00000036323.15	ENST00000580060.1	1744	15	18819	-415	18819	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGGCCAGAAACTCACC	NA	NA	NA	NA	NA	NA	NA	NA	77145267	77146627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77145430_77146038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019622	chr5	+	755	1	ISM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	24500	0	20581	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGGTATTGGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	77147029	77147784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77147000_77147800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019623	chr5	+	623	3	FSM	ENSMUSG00000063820.12	ENST00000640821.3	622	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTCTCGCAATGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	77154322	77158546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_77154482_77155078_77155255_77158258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019624	chr5	+	618	3	NNC	ENSMUSG00000063820.12	novel	622	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTCTCGCAATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	77154329	77158545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_77154482_77155078_77155255_77158255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019625	chr5	+	606	3	NNC	ENSMUSG00000063820.12	novel	622	3	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTCTCGCAATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	77154335	77158545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_77154482_77155078_77155265_77158271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019626	chr5	+	590	3	NNC	ENSMUSG00000063820.12	novel	622	3	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTCTCGCAATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	77154341	77158545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_77154482_77155078_77155255_77158271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019627	chr5	-	559	2	FSM	ENSMUSG00000059325.15	ENSMUST00000120827.9	1217	2	302	356	302	-356	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTCCCTGTGCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	77242798	77235190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_77235664_77242712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019628	chr5	+	767	2	ISM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	1927	11133	1927	-11133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCGGACTCATTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	77415969	77423146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77416671_77423080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019629	chr5	+	741	1	ISM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	20201	0	19496	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	77433538	77434279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77433500_77434300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019630	chr5	-	559	3	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	10361	0	10361	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCCATGTATCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	77447570	77442028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_77442404_77444932_77445051_77447504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019631	chr5	-	638	2	ISM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	670	13406	670	-13406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCAATCAACTGAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	77457261	77455434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_77455565_77456753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019632	chr5	+	670	4	ISM	ENSMUSG00000029250.6	ENST00000431623.6	3645	24	34342	0	34342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	77492684	77497171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77492753_77493097_77493259_77496069_77496266_77496926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019633	chr5	-	1118	5	FSM	ENSMUSG00000036256.14	ENSMUST00000046746.10	1116	5	0	-2	0	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAATGACAATCACA	NA	NA	NA	NA	NA	NA	NA	NA	77555888	77497084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_77497347_77499074_77499202_77499759_77499877_77503408_77503519_77555386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019634	chr5	-	558	4	NNC	ENSMUSG00000036256.14	novel	1116	5	NA	NA	52367	-54	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAAAAAAGCACATGT	NA	NA	NA	NA	NA	NA	NA	NA	77503520	77497148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_77497347_77499074_77499202_77499759_77499877_77503404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019635	chr5	-	551	3	NNC	ENSMUSG00000036256.14	novel	1116	5	NA	NA	150	-2696	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAGCATGAAGTAACGG	NA	NA	NA	NA	NA	NA	NA	NA	77555737	77499790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_77499877_77503404_77503519_77555386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019636	chr5	+	433	1	ISM	ENSMUSG00000106985.2	ENSMUST00000201899.2	738	2	8202	0	8202	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTGAGAGAAAAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	77641775	77642208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_77641800_77642200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019637	chr5	-	411	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTTTTTAAAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	79786318	79785907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr5_-_79785900_79786300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019638	chr5	-	1076	5	ISM	ENSMUSG00000072845.4	ENST00000508048.6	1142	6	3190	0	3190	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATTTCAGAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	86576580	86559489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_86559783_86562335_86562479_86567860_86568121_86570352_86570525_86576372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019639	chr5	-	296	1	NIC	ENSMUSG00000072845.4	novel	2657	9	NA	NA	19985	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATTTCAGAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	86559785	86559489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_86559500_86559800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019640	chr5	-	432	3	ISM	ENSMUSG00000072845.4	ENST00000508048.6	1142	6	14	10863	14	-10863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTATTGAACTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86579756	86570352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_86570525_86576372_86576578_86579701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019641	chr5	+	545	1	ISM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	31878	4	31547	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTTGCTGTATTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	86983969	86984514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_86984000_86984500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019642	chr5	-	1209	4	FSM	ENSMUSG00000029260.16	ENST00000511240.1	1201	4	-6	-2	-6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGCTGGAAGGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	87054729	87039092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_87039341_87049012_87049145_87052115_87052265_87054049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019643	chr5	-	1194	4	NNC	ENSMUSG00000029260.16	novel	1201	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTAAAGCTGGAAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	87054723	87039094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_87039341_87049012_87049138_87052115_87052265_87054049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019644	chr5	+	828	4	ISM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	9098	0	9098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTAGGTCCCTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	88612989	88615988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_88613050_88613148_88613194_88613564_88613610_88615310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019645	chr5	+	680	1	NIC	ENSMUSG00000029288.12	novel	1570	11	NA	NA	11418	1	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTAGGTCCCTTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	88615309	88615989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_88615300_88616000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019646	chr5	+	1312	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	319	-2	319	2	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTAATACCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	88702639	88703951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_88702600_88704000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019647	chr5	+	522	4	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	16506	28558	16506	-19501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGAAACTCTCAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	88762797	88769285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_88762974_88764320_88764439_88765193_88765296_88769159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019648	chr5	+	577	5	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	38758	4355	38758	2933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAAGGGAGCTCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	88785049	88793488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019649	chr5	+	466	5	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	40558	1660	40558	-1660	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGTCCCTTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	88786849	88796183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_88786938_88790787_88790908_88791926_88792024_88793395_88793488_88796114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019650	chr5	+	412	4	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	45634	0	45634	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCAGGCCAGAGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	88791925	88797843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_88792024_88793395_88793488_88796114_88796184_88797690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019651	chr5	+	774	1	ISM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	85579	0	52186	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTTGGTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88798477	88799251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_88798500_88799300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019652	chr5	-	440	4	ISM	ENSMUSG00000044221.15	ENSMUST00000113234.8	2286	10	2992	6394	2992	-6394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATATATAACTGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	88820533	88813710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_88813801_88818034_88818171_88819020_88819165_88820463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019653	chr5	+	1662	3	ISM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	28746	439	28746	-439	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGTTAGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	88897475	88905409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_88897518_88901018_88901183_88903953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019654	chr5	-	783	4	ISM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	4542	-1	4513	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGTGAGATAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90367318	90362581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019655	chr5	-	453	1	NIC	ENSMUSG00000035505.15	novel	1307	6	NA	NA	8796	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	90363035	90362582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_90362600_90363000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019656	chr5	-	544	3	ISM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	64	4650	64	-4650	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACATTCAGACGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	90371767	90367232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_90367383_90370089_90370191_90371474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019657	chr5	+	810	5	ISM	ENSMUSG00000029368.11	ENST00000503124.5	1406	10	7569	0	7569	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAATATTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	90616338	90620543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_90616555_90617360_90617494_90618599_90618698_90619863_90620003_90620319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019658	chr5	-	764	7	FSM	ENSMUSG00000029370.11	ENST00000395777.6	773	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCAAAGTGAGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90765637	90751910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_90752000_90752104_90752224_90754273_90754326_90756657_90756852_90757573_90757669_90763653_90763797_90765565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019659	chr5	+	1570	4	FSM	ENSMUSG00000029371.8	ENSMUST00000031318.6	1575	4	7	-2	7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGTCTCTGATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	90907243	90909485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_90907420_90907547_90907684_90907825_90907910_90908311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019660	chr5	+	1177	1	Genic_Genomic	ENSMUSG00000029371.8	novel	NA	NA	NA	NA	1072	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGTCTCTGATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	90908308	90909485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_90908300_90909500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019661	chr5	+	829	3	ISM	ENSMUSG00000029380.12	ENSMUST00000031327.9	953	4	223	-10	223	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTGCTTTTTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	91039322	91040984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91039453_91039567_91039649_91040366
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019662	chr5	+	617	1	Genic_Genomic	ENSMUSG00000029380.12	novel	NA	NA	NA	NA	1267	9	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTGCTTTTTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	91040366	91040983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_91040400_91041000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019663	chr5	+	282	2	ISM	ENSMUSG00000029376.9	ENSMUST00000071652.6	2159	8	23	74428	23	13519	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAGGAATAAGATAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	91079161	91094799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91079293_91094648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019664	chr5	+	468	3	ISM	ENSMUSG00000029376.9	ENST00000433372.5	696	6	13874	14555	13874	-14555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTAACCTGGGTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	91094642	91107717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91094834_91096681_91096805_91107563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019665	chr5	+	380	3	ISM	ENSMUSG00000029376.9	ENST00000433372.5	696	6	15921	13012	15921	-13012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTGGTTTGTGCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	91096689	91109260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91096805_91107563_91107717_91109148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019666	chr5	+	345	3	NNC	ENSMUSG00000029376.9	novel	696	6	NA	NA	15960	-13012	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTGGTTTGTGCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	91096728	91109260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_91096805_91107563_91107721_91109148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019667	chr5	+	360	3	ISM	ENSMUSG00000029376.9	ENST00000433372.5	696	6	26792	-5	26792	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCGCATTGATGGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	91107560	91122277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91107717_91109148_91109257_91122181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019668	chr5	+	253	3	ISM	ENSMUSG00000029376.9	ENSMUST00000071652.6	2159	8	30053	20780	28423	-20780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTTAGTTGGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	91109191	91148447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91109257_91122181_91122275_91148352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019669	chr5	+	271	2	ISM	ENSMUSG00000029376.9	ENSMUST00000071652.6	2159	8	69239	1047	67609	-1047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTCTCTATTTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	91148377	91168180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91148479_91168010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019670	chr5	+	230	1	ISM	ENSMUSG00000029376.9	ENSMUST00000071652.6	2159	8	89859	0	88229	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGCTATATTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	91168997	91169227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91169000_91169200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019671	chr5	+	942	5	ISM	ENSMUSG00000029378.6	ENSMUST00000031325.6	1215	6	1296	0	1296	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGAGTTTGGATATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	91288753	91296291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91288985_91291347_91291550_91292192_91292355_91294496_91294606_91296053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019672	chr5	+	809	2	ISM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	17	32594	17	-32594	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCACAGAAGCTCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	91665490	91742159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91665817_91741676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019673	chr5	+	789	1	ISM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	108491	0	108491	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGTCGCTCTGATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	91773964	91774753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_91774000_91774800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019674	chr5	-	1171	4	ISM	ENSMUSG00000029397.16	ENSMUST00000169948.2	1417	8	9622	-98	9617	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTTTATGGATGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	92100972	92096761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019675	chr5	-	968	1	NIC	ENSMUSG00000029397.16	novel	1967	9	NA	NA	12859	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTATGGATGAATG	NA	NA	NA	NA	NA	NA	NA	NA	92097730	92096762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_92096800_92097700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019676	chr5	-	1046	3	NNC	ENSMUSG00000029397.16	novel	650	7	NA	NA	9618	-12	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTACTGAAATACTG	NA	NA	NA	NA	NA	NA	NA	NA	92100971	92096871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_92097724_92099679_92099801_92100898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019677	chr5	+	556	3	FSM	ENSMUSG00000102644.6	ENST00000380837.7	553	3	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGTTTGTGAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	92111538	92117640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_92111645_92112954_92113164_92117399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019678	chr5	+	551	3	NNC	ENSMUSG00000102644.6	novel	553	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTAGTTTGTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	92111540	92117639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_92111643_92112954_92113164_92117399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019679	chr5	-	1785	1	ISM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	29627	0	19356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAATCTGAAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	92201789	92200004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_92200000_92201800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019680	chr5	-	2109	2	ISM	ENSMUSG00000029405.17	ENST00000395719.7	4060	12	18881	95	18881	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTAATTGTTTCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	92202264	92200109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_92200525_92200570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019681	chr5	-	2287	5	ISM	ENSMUSG00000029405.17	ENST00000395719.7	4060	12	9891	1021	9891	540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCGTGTGACCACTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	92211254	92201035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019682	chr5	-	504	1	FSM	ENSMUSG00000084111.5	ENSMUST00000121821.2	636	1	203	-71	203	71	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCGTGGATGATTATATAG	NA	NA	NA	NA	NA	NA	NA	NA	92288585	92288081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_92288100_92288600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019683	chr5	-	440	1	ISM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	20072	0	20067	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCTGAGTGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	92405957	92405517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_92405500_92406000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019684	chr5	-	463	2	ISM	ENSMUSG00000029413.15	ENSMUST00000159345.8	1629	11	18551	109	18551	-109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGATAGATAGATAGATA	NA	NA	NA	NA	NA	NA	NA	NA	92407473	92406400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_92406803_92407412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019685	chr5	+	582	3	FSM	ENSMUSG00000034842.17	ENST00000349321.7	887	3	6	299	6	-299	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGGTGTACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	92534748	92540729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_92534851_92535992_92536071_92540327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019686	chr5	+	472	1	ISM	ENSMUSG00000034842.17	ENSMUST00000113083.9	1561	10	60858	21455	4556	1	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGGGGTAAGTAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	92540557	92541029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_92540600_92541000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019687	chr5	-	1592	1	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	62732	0	62732	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCACTGTGAACTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	92590764	92589172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_92589200_92590800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019688	chr5	-	1811	4	ISM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	55704	1434	55704	-1434	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAATTCCCTGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	92597792	92590606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019689	chr5	+	752	2	FSM	ENSMUSG00000047963.8	ENSMUST00000050952.4	1985	2	0	1233	0	527	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGGGAAAGTGGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	92750909	92753205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_92751197_92752740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019690	chr5	+	514	1	Genic_Genomic	ENSMUSG00000047963.8	novel	NA	NA	NA	NA	3017	2	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTCTCATTTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	92753926	92754440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_92753900_92754400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019691	chr5	+	1029	1	ISM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	80493	0	80359	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	93321788	93322817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_93321800_93322800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019692	chr5	-	317	1	ISM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	24246	0	24246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGTAGGAGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	93330108	93329791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_93329800_93330100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019693	chr5	-	363	2	ISM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	18803	1230	18803	-1230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAACCTCTGCTAAACG	NA	NA	NA	NA	NA	NA	NA	NA	93335551	93331021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_93331280_93335446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019694	chr5	+	1360	1	NIC	ENSMUSG00000029385.15	novel	2810	8	NA	NA	6558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATTTCAGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	93422730	93424090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_93422700_93424100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019695	chr5	+	1309	1	FSM	ENSMUSG00000096617.4	ENSMUST00000180755.2	1002	1	-81	-226	-81	226	mono-exon	FALSE	NA	NA	NA	NA	NA	1552	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAACAGATTGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	96009491	96010800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_96009500_96010800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019696	chr5	+	584	1	FSM	ENSMUSG00000107092.2	ENSMUST00000200970.2	1384	1	1171	-371	1171	371	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGATGTCTCTAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	96123269	96123853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_96123300_96123900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019697	chr5	+	158	1	ISM	ENSMUSG00000029486.14	ENSMUST00000117766.8	3556	10	57077	0	56426	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTGTATGAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	96414428	96414586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_96414400_96414600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019698	chr5	+	231	2	ISM	ENSMUSG00000034663.14	ENSMUST00000112974.6	3244	14	266	41730	266	-41730	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTTGTAAAAGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	97145813	97175778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_97145956_97175689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019699	chr5	-	1360	1	ISM	ENSMUSG00000029338.14	ENSMUST00000031281.14	5656	17	144876	1944	143570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTCCACATATTAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	98033945	98032585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_98032600_98033900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019700	chr5	-	1704	4	ISM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	82250	534	81315	-534	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTAGTGTGAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	98096200	98033119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_98034460_98085924_98086027_98086261_98086427_98096103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019701	chr5	-	510	3	ISM	ENSMUSG00000029334.15	ENSMUST00000162619.8	1308	5	1614	460	1614	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	99090077	99079586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_99079965_99082187_99082255_99090012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019702	chr5	-	489	3	ISM	ENSMUSG00000029334.15	ENSMUST00000162619.8	1308	5	60	3061	60	-2609	intron_retention	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTATTTGCTAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	99091631	99082187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_99082255_99090012_99090076_99091272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019703	chr5	-	2998	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	-246	0	43	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	100187327	100181435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019704	chr5	+	383	3	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	2	7536	2	-7536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCGCTCACGATAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	100188047	100209028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100188133_100206998_100207101_100208832
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019705	chr5	+	1198	4	ISM	ENSMUSG00000029326.14	ENST00000505846.5	1353	5	18974	47	18974	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGGATATAAAGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	100207019	100216517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100207101_100210001_100210135_100211617_100211742_100215657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019706	chr5	+	352	3	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	20785	4924	20785	-4924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATTGGACACAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100208830	100211640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100209027_100210001_100210135_100211617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019707	chr5	+	241	2	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	20866	-6430	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTACTTGGTGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	100208911	100210134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_100209031_100210012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019708	chr5	+	212	2	NNC	ENSMUSG00000029326.14	novel	1353	5	NA	NA	23632	-755	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGCCGTCCCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	100211677	100215809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_100211738_100215657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019709	chr5	+	911	1	Genic_Genomic	ENSMUSG00000029326.14	novel	NA	NA	NA	NA	27668	5	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCATACAGACGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	100215713	100216624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_100215700_100216600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019710	chr5	-	479	6	FSM	ENSMUSG00000050640.17	ENST00000508701.5	493	6	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCGAGAGTCATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100243544	100231482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_100231611_100233996_100234114_100240625_100240694_100240793_100240827_100240917_100240972_100243465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019711	chr5	-	373	3	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	44162	0	44162	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCAGCACTGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	100511809	100509911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100510090_100511235_100511308_100511686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019712	chr5	-	179	1	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	45881	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCAGCACTGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	100510090	100509911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_100509900_100510100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019713	chr5	-	346	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	42156	1775	42156	-1775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGACTCTTCTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	100513815	100511686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100511807_100513589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019714	chr5	-	480	3	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	34502	3752	34502	-3752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCATGCCGCCGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	100521469	100513663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100513854_100516152_100516212_100521238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019715	chr5	-	494	3	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	29108	11470	29108	-11470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCCCCCTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	100526863	100521381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100521575_100523066_100523191_100526686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019716	chr5	-	351	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	26777	16774	26777	-16774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATATGGTCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100529194	100526685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100526861_100529018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019717	chr5	-	325	2	NNC	ENSMUSG00000035325.17	novel	3934	24	NA	NA	25204	-19107	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTAGTGTCCATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	100530767	100529018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_100529193_100530616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019718	chr5	-	250	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	24213	20708	24213	-20708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGTCTTTGCAACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	100531758	100530619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100530767_100531655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019719	chr5	-	307	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	22809	21744	22809	-21744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAACAAGCTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	100533162	100531655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100531783_100532982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019720	chr5	-	334	3	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	19500	23071	19500	-23071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTATTTTTCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	100536471	100532982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100533162_100533986_100534063_100536392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019721	chr5	-	265	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	15528	28706	15528	-28706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCCCTGAGAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100540443	100538617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100538693_100540253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019722	chr5	-	344	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	15095	30387	15095	-30387	internal_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCCAGACCGAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	100540876	100540298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100540488_100540721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019723	chr5	-	296	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	14767	30810	14767	-30810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGATTTCACTTATG	NA	NA	NA	NA	NA	NA	NA	NA	100541204	100540721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100540875_100541061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019724	chr5	-	264	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	12209	31150	12209	-31150	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGGCAGTATTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	100543762	100541061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100541224_100543660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019725	chr5	-	247	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	8622	33746	8622	-33746	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGGGGTGCTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	100547349	100543657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100543761_100547205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019726	chr5	-	287	2	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	5755	37293	5755	-37293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACGCTCCTGTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	100550216	100547204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100547349_100550073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019727	chr5	-	438	3	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	2468	40162	2468	-40162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCAGGATTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	100553503	100550073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100550215_100551873_100551970_100553302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019728	chr5	-	360	3	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	42	43391	42	-43391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGACTTTGTTTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	100555929	100553302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100553502_100555015_100555140_100555892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019729	chr5	-	624	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	4	-2	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTAGAATGTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100577390	100568698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019730	chr5	+	578	4	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	0	17653	0	-17630	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGTAAATAGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	100666174	100678016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019731	chr5	+	492	4	ISM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	9514	14383	9514	-14383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGTGACCTAATCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	100675839	100681263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100675920_100676404_100676557_100677912_100678017_100681107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019732	chr5	+	733	5	ISM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	10080	10310	10080	-10310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATCATGTCTGACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100676405	100685336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019733	chr5	+	453	4	NNC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	11585	-10436	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGCAACTAGCTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	100677910	100685210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_100678017_100681107_100681262_100681377_100681529_100685168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019734	chr5	+	593	4	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	14933	6150	14782	-6127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTAATTCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	100681107	100689519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100681262_100681377_100681529_100685163_100685335_100689402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019735	chr5	+	874	4	ISM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	18987	0	18836	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTCTATTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100685161	100695669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100685335_100689402_100689519_100691704_100691790_100695169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019736	chr5	+	504	1	Genic_Genomic	ENSMUSG00000035297.15	novel	NA	NA	NA	NA	28844	4	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTATTCCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100695169	100695673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_100695200_100695700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019737	chr5	-	1743	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	NA	NA	NA	NA	NA	NA	NA	100822150	100802588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019738	chr5	-	735	1	ISM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	39498	0	39368	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGGTCATTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	100828084	100827349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100827300_100828100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019739	chr5	-	266	2	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	30647	0	30647	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAAAGTCTCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	100836805	100832845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100832993_100836686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019740	chr5	-	148	1	NIC	ENSMUSG00000035273.15	novel	3117	12	NA	NA	34459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAAAGTCTCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	100832993	100832845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_100832800_100833000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019741	chr5	-	234	2	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	28173	3841	28173	-3841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATGGAACACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	100839279	100836686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100836806_100839164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019742	chr5	-	317	3	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	26608	6318	26608	-6318	internal_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGACCTCACTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100840844	100839163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100839280_100840048_100840156_100840750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019743	chr5	-	298	3	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	23947	7902	23947	-7902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTCTATCTGAATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	100843505	100840747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100840845_100842017_100842066_100843352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019744	chr5	-	272	2	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	10803	10531	10803	-10531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAGTTAAACTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	100856649	100843376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100843522_100856522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019745	chr5	-	273	2	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	8111	23677	8111	-23677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCTGCAGGCGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	100859341	100856522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100856649_100859194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019746	chr5	-	280	2	ISM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	61	26349	61	-26349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACTTTTAAGAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	100867391	100859194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100859341_100867257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019747	chr5	-	379	2	ISM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	13169	20822	13169	-20822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACGGAGGTAAGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	100933295	100930832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100931064_100933147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019748	chr5	+	468	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112901.2	820	5	-89	441	31	-381	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCACTCCTGCACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	100946523	100951896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019749	chr5	+	121	2	ISM	ENSMUSG00000016833.15	ENST00000507019.5	255	4	1	1294	1	-1294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAATCATAGAAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	100947423	100950983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100947480_100950918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019750	chr5	+	336	1	FSM	ENSMUSG00000104761.2	ENSMUST00000197084.2	2297	1	1972	-11	1972	11	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGGGCAGGGGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	100948586	100948922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_100948600_100948900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019751	chr5	+	343	4	ISM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	3280	0	2350	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	100949772	100952337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_100949858_100950918_100950977_100951835_100951896_100952197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019752	chr5	-	1480	3	ISM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	11337	0	11312	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100957494	100953057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_100954356_100954644_100954757_100957424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019753	chr5	+	1170	2	FSM	ENSMUSG00000106164.2	ENSMUST00000198824.2	1178	2	26	-18	26	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGAAATAGCTGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	101851477	101853734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_101851977_101853063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019754	chr5	+	876	5	ISM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	8619	0	8619	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTCAAGTTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	104203353	104213245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019755	chr5	+	1413	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTGTCAATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	104582984	104588920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019756	chr5	+	1121	5	NNC	ENSMUSG00000029304.15	novel	1507	6	NA	NA	181	-207	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAGAAATGCAAACGGC	NA	NA	NA	NA	NA	NA	NA	NA	104584238	104588702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_104584313_104585486_104585602_104586091_104586134_104587130_104587413_104588094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019757	chr5	+	1211	3	NNC	ENSMUSG00000029304.15	novel	1507	6	NA	NA	1461	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGGTGTCAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	104585518	104588919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_104585602_104587109_104587413_104588094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019758	chr5	+	1159	3	ISM	ENSMUSG00000029304.15	ENSMUST00000112747.2	1507	6	2021	-7	2021	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	104586078	104588916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_104586134_104587130_104587413_104588094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019759	chr5	+	1139	3	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	2030	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	104586087	104588916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_104586134_104587141_104587413_104588094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019760	chr5	+	1133	3	NNC	ENSMUSG00000029304.15	novel	1410	7	NA	NA	2031	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	104586088	104588916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_104586134_104587130_104587413_104588110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019761	chr5	+	1141	3	NNC	ENSMUSG00000029304.15	novel	1507	6	NA	NA	2031	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGTCAATTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	104586088	104588923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_104586134_104587130_104587398_104588094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019762	chr5	+	829	1	Genic_Genomic	ENSMUSG00000029304.15	novel	NA	NA	NA	NA	4034	4	mono-exon	FALSE	NA	NA	NA	NA	NA	954	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTGTCAATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	104588091	104588920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_104588100_104588900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019763	chr5	+	434	3	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	29	14517	29	-14517	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATCTTCTTGGCATACG	NA	NA	NA	NA	NA	NA	NA	NA	104628072	104637196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_104628241_104634512_104634681_104637098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019764	chr5	+	436	3	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	6466	13121	6466	-13121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTACATTTGTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	104634509	104638592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_104634681_104637098_104637281_104638509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019765	chr5	+	413	4	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	9162	5289	9162	-5289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTGAGGGCCATGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	104637205	104646424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_104637281_104638509_104638631_104642758_104642858_104646306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019766	chr5	+	673	3	ISM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	19030	-3	19030	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGTTCAAGGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	104647073	104651716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_104647200_104650157_104650306_104651317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019767	chr5	+	402	1	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	23271	3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGTTCAAGGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	104651314	104651716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_104651300_104651700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019768	chr5	+	1676	1	ISM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	44694	0	23966	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTGTTAAAAACACGT	NA	NA	NA	NA	NA	NA	NA	NA	104652009	104653685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_104652000_104653700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019769	chr5	+	2115	2	ISM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	31518	1440	31518	-1440	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAAGCGACTGACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	105880172	105961636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_105880241_105959589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019770	chr5	+	2088	1	ISM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	113159	0	112339	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCACAACCTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	105960993	105963081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_105961000_105963100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019771	chr5	+	1123	1	ISM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	18988	0	18749	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	107131175	107132298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_107131200_107132300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019772	chr5	-	553	1	ISM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	179904	2603	105354	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCATAGCCAATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	107257591	107257038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_107257000_107257600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019773	chr5	-	642	2	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	96511	93	96511	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGAAGGGATGTCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	107266434	107257131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_107257624_107266284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019774	chr5	-	573	3	NNC	ENSMUSG00000029287.15	novel	2946	14	NA	NA	84508	-275	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGGACATCTGTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	107278437	107257313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_107257624_107266280_107266433_107278326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019775	chr5	-	588	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	77418	23560	77418	-23560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGGGCTCTCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	107285527	107280598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_107280896_107284784_107284944_107285395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019776	chr5	-	546	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	74444	28357	74444	-28357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTTAGTCTCCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	107288501	107285395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_107285537_107287634_107287788_107288249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019777	chr5	-	562	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	72561	30678	72561	-30678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTACTGGAGTCTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	107290384	107287716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_107287788_107288249_107288579_107290222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019778	chr5	-	601	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	66972	31211	66972	-31211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGCAGTCTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	107295973	107288249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_107288579_107290222_107290413_107295891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019779	chr5	-	485	3	ISM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	60661	38852	60661	-38852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGGTTGCTCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107302284	107295890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_107296040_107297655_107297825_107302117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019780	chr5	+	538	4	ISM	ENSMUSG00000033773.15	ENSMUST00000112655.8	2686	12	6079	22722	322	-22722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTTTGTGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	107751718	107768066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_107751753_107754770_107754860_107766006_107766043_107767687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019781	chr5	+	519	3	ISM	ENSMUSG00000033773.15	ENST00000610020.2	1594	9	16874	29322	16874	-16950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTAATGGTATAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107768270	107773838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_107768622_107771579_107771663_107773753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019782	chr5	-	720	1	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	126583	2	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTCTGTTTCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	107896325	107895605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_107895600_107896300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019783	chr5	-	854	3	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	86785	17	86785	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATTTATCCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	107936123	107895624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_107896324_107912541_107912638_107936064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019784	chr5	+	492	4	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	1371	5166	1371	-5166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGAGGCTTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	108049738	108051705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108049806_108049887_108050004_108051134_108051270_108051531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019785	chr5	+	538	4	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	1605	4120	1605	-4120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGACATGGTAAAAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	108049972	108052751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108050004_108051134_108051270_108051531_108051735_108052582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019786	chr5	+	822	4	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	3175	746	3175	-746	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCATGAGTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	108051542	108056125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108051735_108052582_108052761_108055054_108055144_108055762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019787	chr5	+	410	3	NNC	ENSMUSG00000058558.13	novel	2045	8	NA	NA	3186	-1760	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCCCAAGAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	108051553	108055111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_108051735_108052582_108052761_108055060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019788	chr5	+	125	1	FSM	ENSMUSG00000077222.3	ENSMUST00000104034.3	132	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108053049	108053174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_108053000_108053200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019789	chr5	-	473	1	ISM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	78560	0	78560	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTTGATCAATATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	108056391	108055918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_108055900_108056400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019790	chr5	+	401	1	Genic_Genomic	ENSMUSG00000058558.13	novel	NA	NA	NA	NA	8104	1	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGGCATTCTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	108056471	108056872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_108056500_108056900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019791	chr5	-	760	1	ISM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	77377	896	77377	1	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTACACACTTTAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	108057574	108056814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_108056800_108057600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019792	chr5	-	1066	4	FSM	ENSMUSG00000029270.11	ENST00000616709.4	1656	4	57	533	48	-533	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATGGAACATTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	108134903	108057348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_108058083_108062211_108062320_108072450_108072586_108134814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019793	chr5	-	592	3	ISM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	72709	1780	72709	-883	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAAACTTTCTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	108062242	108057698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_108058083_108059477_108059655_108062211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019794	chr5	-	478	4	ISM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	77	3561	77	-2664	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGTGTATGCAATACT	NA	NA	NA	NA	NA	NA	NA	NA	108134874	108059479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_108059655_108062211_108062320_108072450_108072586_108134814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019795	chr5	+	1949	2	ISM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	38683	574	38681	-574	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAGAAACATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	108252290	108256296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108252397_108254453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019796	chr5	+	1896	1	ISM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	41367	0	41365	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108254974	108256870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108255000_108256900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019797	chr5	-	3803	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	108280489	108269492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019798	chr5	+	1361	4	FSM	ENSMUSG00000029265.5	ENST00000370267.1	1404	4	46	-3	46	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTGTTTAGAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	108417005	108427027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_108417049_108417164_108417676_108423434_108423599_108426384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019799	chr5	+	905	3	NNC	ENSMUSG00000029265.5	novel	3085	3	NA	NA	597	-13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGCTCAGATAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	108417556	108427011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_108417676_108423434_108423599_108426389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019800	chr5	+	582	1	ISM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	11048	0	10851	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTATATTTAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	108427810	108428392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108427800_108428400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019801	chr5	-	371	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTCTCTTTACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	108582314	108581109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019802	chr5	-	738	6	ISM	ENSMUSG00000029490.5	ENST00000515118.5	933	7	1321	0	1321	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATCCTCTTCACCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	108592640	108590030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_108590128_108590889_108591000_108591304_108591463_108591720_108591874_108592336_108592454_108592537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019803	chr5	+	474	3	FSM	ENSMUSG00000033623.14	ENST00000400151.6	475	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGCCAGTTCTACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	108609137	108621776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_108609322_108620215_108620384_108621654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019804	chr5	+	426	3	NNC	ENSMUSG00000033623.14	novel	475	3	NA	NA	46	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGCCAGTTCTACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	108609181	108621776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_108609322_108620219_108620384_108621654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019805	chr5	+	258	1	ISM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	45487	0	45449	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGATTCCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108654584	108654842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108654600_108654800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019806	chr5	+	1641	3	ISM	ENSMUSG00000013495.16	ENSMUST00000078323.13	2374	11	14165	0	14158	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTTTGAACATTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108792032	108795129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108792113_108792422_108792559_108793704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019807	chr5	-	1418	1	Genic_Genomic	ENSMUSG00000004815.13	novel	NA	NA	NA	NA	12702	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACCCTTCACTGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108795975	108794557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_108794600_108796000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019808	chr5	+	1079	1	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	17872	0	17695	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTAGCCTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	108795569	108796648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108795600_108796600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019809	chr5	+	1003	6	ISM	ENSMUSG00000033540.19	ENST00000247933.9	1544	11	439	1571	439	-1571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGCAAGTAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	108828005	108829660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019810	chr5	+	1020	6	ISM	ENSMUSG00000033540.19	ENST00000247933.9	1544	11	629	1344	629	-1344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGGCAAGTGGCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108828195	108829887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019811	chr5	+	802	1	ISM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	14646	4	4051	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACCTGGCCTCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	108831617	108832419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108831600_108832400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019812	chr5	+	779	5	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	12	1338	12	-1338	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGTAGCTCTGTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	108842108	108852774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019813	chr5	+	878	4	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	9079	765	8808	-765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGCCAGGATGATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108851175	108853347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108851425_108852532_108852614_108852720_108853006_108853084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019814	chr5	+	1155	4	ISM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	10435	-3	10164	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGAATCTCCAAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	108852531	108854115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_108852614_108852720_108853006_108853084_108853439_108853681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019815	chr5	+	584	1	FSM	ENSMUSG00000105303.2	ENSMUST00000197935.2	584	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTTGCCACAGATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	109621261	109621845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_109621300_109621800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019816	chr5	-	304	1	ISM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	15304	0	15304	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATACAATATGGTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	109884159	109883855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_109883900_109884200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019817	chr5	-	572	1	FSM	ENSMUSG00000105044.2	ENSMUST00000197379.2	645	1	73	0	73	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGCTACATAGAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	109981938	109981366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_109981400_109981900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019818	chr5	+	1945	3	FSM	ENSMUSG00000066613.15	ENSMUST00000112536.8	2509	3	571	-7	351	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGGTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110154832	110158277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_110154937_110155121_110155183_110156497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019819	chr5	+	1782	1	NIC	ENSMUSG00000066613.15	novel	2081	4	NA	NA	2014	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGGTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110156495	110158277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_110156500_110158300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019820	chr5	-	1737	3	ISM	ENSMUSG00000090963.3	ENSMUST00000210275.2	1776	4	23121	-3	-2906	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGATATGGTAAAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	110197258	110194001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_110195551_110196887_110196949_110197131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019821	chr5	-	706	4	ISM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	3098	0	3098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTGGTTTTGTATAGGT	NA	NA	NA	NA	NA	NA	NA	NA	110252965	110251840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019822	chr5	+	256	2	ISM	ENSMUSG00000023284.16	ENSMUST00000086686.7	2085	4	12300	1694	12300	-1694	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAATCTAAAAAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	110272217	110275274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110272312_110275112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019823	chr5	+	533	1	ISM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	35590	0	35579	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110319304	110319837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110319300_110319800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019824	chr5	+	1150	1	ISM	ENSMUSG00000029501.15	ENSMUST00000086674.10	5025	14	23317	1181	23280	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGCACTTGAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	110402186	110403336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110402200_110403300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019825	chr5	-	2011	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	87	0	61	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTAGAAACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	110417692	110406995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019826	chr5	-	1579	4	ISM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	3901	0	3901	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTGTTTTAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	110413852	110407020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019827	chr5	-	351	1	NIC	ENSMUSG00000029499.12	novel	1041	5	NA	NA	9120	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCTCAGCACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	110422498	110422147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_110422100_110422500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019828	chr5	-	297	3	FSM	ENSMUSG00000029499.12	ENST00000537262.1	296	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGATACACCGCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	110431619	110422425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_110422495_110425520_110425641_110431511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019829	chr5	-	280	3	NNC	ENSMUSG00000029499.12	novel	296	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGATACACCGCGGATG	NA	NA	NA	NA	NA	NA	NA	NA	110431610	110422425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_110422495_110425520_110425641_110431519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019830	chr5	+	148	2	ISM	ENSMUSG00000007080.15	ENST00000535270.5	6535	46	4687	41937	4687	4050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTACAATGGGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	110442778	110443151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110442869_110443093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019831	chr5	+	143	2	ISM	ENSMUSG00000007080.15	ENST00000535270.5	6535	46	5338	40148	5338	5839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTATGACCCTGTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	110443429	110444940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110443504_110444871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019832	chr5	+	148	2	ISM	ENSMUSG00000007080.15	ENST00000535270.5	6535	46	8748	38022	8748	7965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAGTATCAGGCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	110446839	110447066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110446887_110446965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019833	chr5	+	140	2	ISM	ENSMUSG00000007080.15	ENST00000535270.5	6535	46	18888	25113	18888	20874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTAATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	110456979	110459975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110457017_110459872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019834	chr5	+	139	2	ISM	ENSMUSG00000007080.15	ENST00000535270.5	6535	46	34339	12437	-6132	-12437	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGCTGACAAGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	110472430	110472651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110472464_110472545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019835	chr5	+	507	1	ISM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	6539	0	6539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTACCCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	110807855	110808362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_110807900_110808400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019836	chr5	-	674	1	Genic_Genomic	ENSMUSG00000029512.12	novel	NA	NA	NA	NA	24893	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTCAATTTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	110933026	110932352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_110932400_110933000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019837	chr5	+	348	3	FSM	ENSMUSG00000029521.8	ENST00000555186.5	342	3	-4	-2	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACGAGGCAGTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111014121	111015962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_111014293_111014831_111014920_111015873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019838	chr5	+	334	3	NNC	ENSMUSG00000029521.8	novel	342	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTACGAGGCAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	111014127	111015960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_111014293_111014837_111014920_111015873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019839	chr5	+	187	2	ISM	ENSMUSG00000029521.8	ENST00000554701.2	336	3	688	0	688	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTACGAGGCAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	111014819	111015960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_111014920_111015873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019840	chr5	+	745	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCAGTGCCACTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	111241732	111242477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr5_+_111241700_111242500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019841	chr5	+	1377	3	ISM	ENSMUSG00000050017.12	ENSMUST00000200298.2	2632	11	49385	714	49385	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAGAGCTAGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	111528057	111535511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_111528169_111530853_111530977_111534368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019842	chr5	+	1600	3	ISM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	52222	468	52178	-468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCCCTGGGACCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	111530850	111535757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_111530977_111533385_111533471_111534368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019843	chr5	+	1438	1	Genic_Genomic	ENSMUSG00000050017.12	novel	NA	NA	NA	NA	56117	2	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGCTCCTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	111534789	111536227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_111534800_111536200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019844	chr5	+	1267	4	ISM	ENSMUSG00000029344.16	ENSMUST00000031287.12	1835	7	3	5468	3	-1843	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACATTGGAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	112424559	112457759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019845	chr5	+	1679	5	ISM	ENSMUSG00000029344.16	ENSMUST00000071455.7	1741	6	30857	-1	-243	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGTGAGTAGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	112455429	112463222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019846	chr5	+	728	3	FSM	ENSMUSG00000029344.16	ENST00000564073.1	917	3	196	-7	196	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGGGGTTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	112455868	112459609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_112456344_112457554_112457758_112459559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019847	chr5	+	663	3	NIC	ENSMUSG00000029344.16	novel	917	3	NA	NA	250	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTCAAAGTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	112455922	112459602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_112456344_112457554_112457754_112459559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019848	chr5	+	934	2	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	9736	241	9736	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGTTGTATTTCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	112483959	112485698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112484047_112484851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019849	chr5	+	871	1	ISM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	10845	0	10845	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAAGTATATGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	112485068	112485939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112485100_112485900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019850	chr5	+	237	2	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	0	28705	0	-28705	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTGAAGGCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	112494458	112497295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112494551_112497150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019851	chr5	+	379	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	2685	14469	2685	-14469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGCAGGCGCTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	112497143	112511531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112497295_112510974_112511083_112511411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019852	chr5	+	258	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	16560	13537	16560	-13537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTCTATAAAGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	112511018	112512463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112511083_112511411_112511529_112512386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019853	chr5	+	272	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	16978	7390	16978	-7390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTCCCCTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	112511436	112518610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112511529_112512386_112512463_112518506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019854	chr5	-	186	2	Antisense	novelGene_ENSMUSG00000105368.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGACAAGACGCGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	112518610	112512382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_112512461_112518502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019855	chr5	-	166	2	Antisense	novelGene_ENSMUSG00000105368.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAGACAAGACGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	112518597	112512385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_112512457_112518502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019856	chr5	+	289	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	17952	3122	17952	-3122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGACACGTGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	112512410	112522878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112512463_112518506_112518611_112522745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019857	chr5	+	174	2	NNC	ENSMUSG00000042328.14	novel	1059	9	NA	NA	24058	-3172	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACATACAACTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	112518516	112522828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_112518608_112522745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019858	chr5	+	286	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	24109	2672	24109	-2672	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTGAGCCCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	112518567	112523328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112518611_112522745_112522879_112523218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019859	chr5	+	334	3	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	28354	17	28354	-17	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGTGAGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	112522812	112525983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_112522879_112523218_112523328_112525824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019860	chr5	+	184	1	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	31359	1	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGCTTGCATATCACGA	NA	NA	NA	NA	NA	NA	NA	NA	112525817	112526001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_112525800_112526000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019861	chr5	-	411	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	38684	0	38684	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCCTACTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112584340	112572487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112572592_112573479_112573595_112584148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019862	chr5	-	482	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	36569	1005	36569	-1005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACGTCACGAGGTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	112586455	112573492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112573595_112584148_112584341_112586267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019863	chr5	-	531	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	13873	13780	13873	-13780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCAAGTTTTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	112609151	112586267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112586463_112588679_112588877_112609012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019864	chr5	-	380	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	12108	16344	12108	-16344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTTGTGCCCCACGTCC	NA	NA	NA	NA	NA	NA	NA	NA	112610916	112588831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112588877_112609012_112609152_112610720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019865	chr5	-	460	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	10416	36569	10416	-36569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACGTTGGGGAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	112612608	112609056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112609152_112610720_112610916_112612438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019866	chr5	-	491	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	9044	38273	9044	-38273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGACCCATACTGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	112613980	112610760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112610916_112612438_112612606_112613811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019867	chr5	-	510	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	3385	39951	3385	-39951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGGCCCCCTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	112619639	112612438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112612606_112613811_112613978_112619462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019868	chr5	-	511	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	1605	46979	1605	-46979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTACCATGAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	112621419	112619466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112619649_112620596_112620790_112621283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019869	chr5	-	351	3	ISM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	93	48122	93	-48122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATTACCAGGGTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	112622931	112620609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_112620790_112621283_112621418_112622894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019870	chr5	-	171	1	NIC	ENSMUSG00000029352.15	novel	816	5	NA	NA	4484	3	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGGGAGCCAACGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	113223939	113223768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_113223800_113223900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019871	chr5	-	428	3	ISM	ENSMUSG00000029352.15	ENST00000404334.1	496	4	670	-1	670	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCCGGGAGCCAACGCC	NA	NA	NA	NA	NA	NA	NA	NA	113227753	113223770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_113223938_113226248_113226382_113227625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019872	chr5	-	328	3	ISM	ENSMUSG00000029352.15	ENST00000404334.1	496	4	4	2475	4	-2475	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCAGGGCTATTGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	113228419	113226246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_113226382_113227625_113227745_113228345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019873	chr5	-	1664	1	ISM	ENSMUSG00000051339.11	ENSMUST00000212276.2	5864	8	50000	0	50000	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGCTGCATGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	113235852	113234188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_113234200_113235900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019874	chr5	+	422	2	ISM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	1126	2356	1126	-2356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTATACACCAGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	113874989	113876305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_113875234_113876127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019875	chr5	+	391	1	Genic_Genomic	ENSMUSG00000053334.7	novel	NA	NA	NA	NA	4413	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCGTTGTCTCATCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	113878276	113878667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_113878300_113878700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019876	chr5	+	332	1	FSM	ENSMUSG00000105031.2	ENSMUST00000199823.2	204	1	-23	-105	-23	105	mono-exon	FALSE	NA	NA	NA	NA	NA	1853	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGCTTGGGCTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113905160	113905492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_113905200_113905500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019877	chr5	+	1431	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	-35	-1	20	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAAGCTGTCTACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113910828	113915860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019878	chr5	+	901	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	56	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTCTCGACTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	113910864	113916349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019879	chr5	+	862	3	ISM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	2413	0	2413	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	113913276	113916334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_113913390_113914831_113915140_113915893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019880	chr5	+	474	1	Genic_Genomic	ENSMUSG00000025825.13	novel	NA	NA	NA	NA	5013	1	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTCTCGACTCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	113915876	113916350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_113915900_113916400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019881	chr5	-	2243	2	FSM	ENSMUSG00000054675.6	ENSMUST00000067853.6	2242	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGGATTATCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113938577	113931788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_113933815_113938360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019882	chr5	-	2041	1	Genic_Genomic	ENSMUSG00000054675.6	novel	NA	NA	NA	NA	4748	1	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTGGATTATCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113933829	113931788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_113931800_113933800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019883	chr5	-	2085	2	NNC	ENSMUSG00000054675.6	novel	2242	2	NA	NA	148	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCTGGATTATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	113938429	113931789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_113933806_113938360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019884	chr5	-	1104	1	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	65219	0	65219	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	113981600	113980496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_113980500_113981600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019885	chr5	-	1304	3	ISM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	62552	1036	62552	-1036	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAAGGGCACCCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	113984267	113981532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_113982530_113983221_113983468_113984206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019886	chr5	-	298	1	ISM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	3945	8	3945	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTATTTGGGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	114262292	114261994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114262000_114262300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019887	chr5	-	432	2	ISM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	2455	87	2455	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGAGGGTCCTGGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	114263782	114262073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114262316_114263592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019888	chr5	+	1278	3	ISM	ENSMUSG00000029591.15	ENSMUST00000112275.8	1733	5	4372	55	4372	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGGTTAGAGCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	114274425	114277324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_114274497_114275213_114275393_114276296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019889	chr5	+	1091	1	NIC	ENSMUSG00000029591.15	novel	1985	7	NA	NA	6238	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGTGCCGACTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	114276291	114277382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_114276300_114277400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019890	chr5	-	680	1	Genic_Genomic	ENSMUSG00000001098.16	novel	NA	NA	NA	NA	16221	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTTCTGGTCTTTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	114502306	114501626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_114501600_114502300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019891	chr5	-	1379	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	49	1675	7	380	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGGCCACCAAGGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	114518520	114503302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019892	chr5	+	453	4	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	3138	30883	3138	-30883	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGAGGTAGGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	114522379	114526846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_114522464_114525154_114525340_114525441_114525563_114526783
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019893	chr5	+	362	3	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	17226	19745	17226	-19745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCACCCTGTGCTCGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	114536467	114537984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_114536575_114536822_114536944_114537850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019894	chr5	+	329	2	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	20086	16989	20086	-16989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCACAGGTCAGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	114539327	114540740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_114539499_114540582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019895	chr5	+	507	4	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	26365	8253	26365	-8253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCGCGCAAAGGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	114545606	114549476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_114545705_114546157_114546278_114549079_114549257_114549364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019896	chr5	+	397	3	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	34396	-1	34396	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCTGGTCTCGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	114553637	114557730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_114553750_114556598_114556692_114557538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019897	chr5	+	328	1	ISM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	40235	0	39661	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTTCTGGTTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	114558902	114559230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_114558900_114559200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019898	chr5	-	566	1	Genic_Genomic	ENSMUSG00000029575.18	novel	NA	NA	NA	NA	8782	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCCAGGGAGTCACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	114573253	114572687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_114572700_114573300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019899	chr5	-	524	2	ISM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	7449	251	7431	-251	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGAGCTGCCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	114574604	114572939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114573399_114574539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019900	chr5	+	765	7	FSM	ENSMUSG00000041939.15	ENST00000392727.7	764	7	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTGTAGGGGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	114588335	114598209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_114588483_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019901	chr5	-	163	1	Genic_Genomic	ENSMUSG00000011884.14	novel	NA	NA	NA	NA	21349	1	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGGCGCTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	114807620	114807457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_114807500_114807600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019902	chr5	-	264	2	ISM	ENSMUSG00000011884.14	ENSMUST00000112212.2	799	5	16713	240	16713	-240	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACGCCATCTACGACA	NA	NA	NA	NA	NA	NA	NA	NA	114812256	114808528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114808651_114812114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019903	chr5	-	257	2	ISM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	14586	4684	14510	-3854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGCTGGTGCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	114814459	114812142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114812266_114814325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019904	chr5	-	186	2	ISM	ENSMUSG00000011884.14	ENSMUST00000112212.2	799	5	13228	6045	13228	-6045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAAGGTAAGGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	114815741	114814333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114814460_114815681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019905	chr5	-	191	2	ISM	ENSMUSG00000011884.14	ENSMUST00000112212.2	799	5	18	7393	18	-7393	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACCCAGCCGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	114828951	114815681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114815741_114828819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019906	chr5	+	1215	1	ISM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	13353	0	13353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	114859173	114860388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_114859200_114860400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019907	chr5	-	1676	1	ISM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	44409	4	44348	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTGCCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	114867147	114865471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114865500_114867100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019908	chr5	-	1135	1	FSM	ENSMUSG00000092183.2	ENSMUST00000173208.2	1247	1	113	-1	113	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTTTTGCTTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114912931	114911796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_114911800_114912900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019909	chr5	-	786	1	ISM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	4995	0	4995	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGCTGTTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	114947042	114946256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_114946300_114947000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019910	chr5	-	817	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	142	374	142	-374	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTCTGGGTGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	114951895	114946630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_114947393_114951840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019911	chr5	-	421	2	FSM	ENSMUSG00000072694.9	ENSMUST00000100850.6	420	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTTATCTATGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	114961506	114960498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_114960787_114961373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019912	chr5	+	412	2	Antisense	novelGene_ENSMUSG00000072694.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATCACTGAAACCCGC	NA	NA	NA	NA	NA	NA	NA	NA	114960498	114961499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_+_114960789_114961377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019913	chr5	+	1063	4	ISM	ENSMUSG00000041827.16	ENST00000339275.10	1377	5	4727	0	4576	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACGGAGGGGGCAGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115066079	115075442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115066365_115067898_115068063_115073979_115074128_115074976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019914	chr5	+	2045	4	ISM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	3884	297	3884	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTAGGGGAAAGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	115084100	115087545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115084176_115084349_115084424_115085221_115085313_115085740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019915	chr5	+	1842	1	Genic_Genomic	ENSMUSG00000029559.16	novel	NA	NA	NA	NA	5785	1	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGATGGTGGTCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	115086001	115087843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_115086000_115087800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019916	chr5	-	977	4	ISM	ENSMUSG00000029556.13	ENST00000541395.5	2102	9	17338	-1	17329	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACCTGACACAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115091588	115088013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115088245_115088752_115089104_115090637_115090830_115091385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019917	chr5	-	695	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	18090	0	18090	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAGCCTGCCATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	115090827	115088028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115088245_115088752_115088923_115088984_115089104_115090637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019918	chr5	-	543	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	17395	799	17395	-799	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACATCCCCAGCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	115091522	115088827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115088923_115088984_115089104_115090637_115090830_115091385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019919	chr5	-	592	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	17073	1024	17073	-1024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGCAGACCATGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	115091844	115089052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115089104_115090637_115090830_115091385_115091588_115091697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019920	chr5	-	787	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	15365	2609	15365	-2609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATCCCCCACGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	115093552	115090637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115090830_115091385_115091588_115091697_115091847_115093308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019921	chr5	-	780	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	10643	3667	10643	-3667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGCAGGGGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115098274	115091695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115091847_115093308_115093551_115093874_115094062_115098074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019922	chr5	-	845	4	ISM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	7	5397	7	-5397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGCCATGGACACCTAT	NA	NA	NA	NA	NA	NA	NA	NA	115108910	115093425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115093551_115093874_115094062_115098074_115098275_115108577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019923	chr5	+	740	1	ISM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	86914	0	86914	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCCTGACTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	115236109	115236849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115236100_115236800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019924	chr5	-	682	2	FSM	ENSMUSG00000072692.8	ENSMUST00000100847.5	682	2	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTTCTCTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	115248326	115240980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_115241588_115248251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019925	chr5	-	607	1	FSM	ENSMUSG00000072692.8	ENSMUST00000124641.2	294	1	-8	-305	-8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTCTTCTCTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	115241588	115240981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_115241000_115241600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019926	chr5	-	255	1	ISM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	12171	0	12171	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCCTGATTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115260863	115260608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115260600_115260900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019927	chr5	-	276	2	ISM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	7858	2782	7858	-2782	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCAGCTGTCGCCCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	115265176	115263390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115263560_115265069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019928	chr5	-	276	2	ISM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	7571	4461	7571	-4461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTATGCGCGCGCGCGC	NA	NA	NA	NA	NA	NA	NA	NA	115265463	115265069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115265243_115265360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019929	chr5	-	775	1	ISM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	14424	0	14424	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	115281814	115281039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115281000_115281800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019930	chr5	-	787	3	ISM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	7794	4613	7794	-4613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGGATCCTCATTATATAC	NA	NA	NA	NA	NA	NA	NA	NA	115288444	115285652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115286204_115288127_115288186_115288266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019931	chr5	+	975	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	1986	3	1986	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCTCCCCGTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	115375880	115379047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019932	chr5	-	579	4	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	28323	-9	28323	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	115382149	115379828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019933	chr5	-	304	1	NIC	ENSMUSG00000041740.17	novel	3476	17	NA	NA	30340	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	115380132	115379828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_115379800_115380100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019934	chr5	-	157	2	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	26509	2242	26509	-2242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATCCTTTGCTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	115383963	115382079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115382181_115383907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019935	chr5	-	538	3	ISM	ENSMUSG00000041740.17	ENSMUST00000040555.15	3106	17	22765	7147	22286	-7138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTGAGTCCCCAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	115388186	115386975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115387230_115387455_115387582_115388028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019936	chr5	-	389	3	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	21209	7655	21209	-7655	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTGGCCACGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115389263	115387492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115387582_115388028_115388190_115389124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019937	chr5	-	394	3	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	20951	8281	20951	-8281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAAGGAGCGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	115389521	115388118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115388190_115389124_115389262_115389335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019938	chr5	-	480	3	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	15236	9498	15236	-9498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGACTGCGGGGTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	115395236	115389335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115389521_115393408_115393500_115395032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019939	chr5	-	489	3	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	12097	13571	12097	-13571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCTTTACCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	115398375	115393408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115393500_115395032_115395233_115398177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019940	chr5	-	489	2	ISM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	-158	18363	-158	-18363	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGGTGGAAGACGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	115410630	115398200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115398375_115410315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019941	chr5	+	1060	3	ISM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	15157	253	15157	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCGCAGAGCGAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115432881	115434778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115432975_115433724_115433837_115433923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019942	chr5	+	912	1	Genic_Genomic	ENSMUSG00000041733.11	novel	NA	NA	NA	NA	16396	1	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGATGTCACTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	115434120	115435032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_115434100_115435000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019943	chr5	-	567	1	ISM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	3323	0	3236	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTGGCTCAAAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115435735	115435168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115435200_115435700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019944	chr5	-	793	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	19	1218	19	177	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTAGTTCTCTTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	115439039	115436386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_115436893_115438571_115438710_115438890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019945	chr5	+	1141	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGCAGTTGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	115465256	115471139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019946	chr5	+	508	1	NIC	ENSMUSG00000029538.15	novel	1162	4	NA	NA	5396	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGCAGTTGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	115470631	115471139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_115470600_115471100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019947	chr5	-	1792	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGCTGATTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	115479232	115471297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_115472654_115473525_115473630_115478900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019948	chr5	+	478	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	29	581	29	-581	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAACTGGTCCTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	115479312	115481047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_115479477_115480733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019949	chr5	+	368	1	Genic_Genomic	ENSMUSG00000029535.5	novel	NA	NA	NA	NA	1979	2	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACTTTATTGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	115481262	115481630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_115481300_115481600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019950	chr5	-	164	1	Genic_Genomic	ENSMUSG00000041697.9	novel	NA	NA	NA	NA	3178	2	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGGTACGATTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	115483862	115483698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_115483700_115483900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019951	chr5	-	290	2	ISM	ENSMUSG00000041697.9	ENSMUST00000040154.9	571	3	271	141	271	-141	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTGGACCACGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	115486769	115483841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115483986_115486623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019952	chr5	-	278	2	ISM	ENSMUSG00000041697.9	ENSMUST00000040154.9	571	3	8	2923	8	-2923	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCGCTGCGCCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	115487032	115486623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115486767_115486897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019953	chr5	-	864	3	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	3817	-4	3817	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGACTGTGAACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	115618539	115616064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115616468_115617660_115617872_115618289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019954	chr5	-	605	2	ISM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	1287	2298	1287	-2298	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGACAAGGTTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	115621069	115618366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115618585_115620682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019955	chr5	-	762	2	ISM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	34	4707	34	-4707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGCACTGGTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	115622750	115620775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115621178_115622390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019956	chr5	+	1364	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	-3	-3	-3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGCCTGGCCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	115697522	115701789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019957	chr5	+	1353	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697525	115701788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699164_115699305_115699391_115699578_115700484_115700626_115701341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019958	chr5	+	1354	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697525	115701788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019959	chr5	+	1350	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	3	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697528	115701788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_115697592_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019960	chr5	+	1345	7	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	19	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697544	115701788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699309_115699391_115699578_115700484_115700626_115701341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019961	chr5	+	1307	6	ISM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	300	-2	300	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697825	115701788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019962	chr5	+	1281	6	NNC	ENSMUSG00000067274.11	novel	1358	7	NA	NA	318	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAAGCCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115697843	115701788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_115697948_115698799_115699064_115699157_115699309_115699403_115699578_115700484_115700626_115701341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019963	chr5	+	456	2	ISM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	11665	1775	11665	-1775	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCTGCCGAGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	115781631	115784020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115781759_115783691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019964	chr5	+	396	1	ISM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	15433	0	15433	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGGGTCTGTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	115785399	115785795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115785400_115785800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019965	chr5	-	1512	2	ISM	ENSMUSG00000041609.17	ENSMUST00000121746.8	1568	3	1042	-1	1042	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTGCCTCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	115789998	115786237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_115787629_115789877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019966	chr5	-	615	1	FSM	ENSMUSG00000083833.5	ENSMUST00000118829.2	483	1	12	-144	12	144	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAGAGATGGCTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	115940206	115939591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_115939600_115940200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019967	chr5	+	505	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	60	132873	60	-132334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAGGCTCCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	115989268	116012053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_115989353_115997256_115997433_116001016_116001119_116011910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019968	chr5	+	439	3	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	22701	121798	22701	-121259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGTCATTAGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	116011909	116023128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_116012054_116013947_116014039_116022924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019969	chr5	+	450	3	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	24738	120060	24738	-119521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACGCGCTCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	116013946	116024866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_116014039_116022924_116023129_116024712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019970	chr5	+	514	3	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	33746	98044	-22600	-97505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGGTGACTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	116022954	116046882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_116023129_116024712_116024867_116046696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019971	chr5	+	350	3	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	35598	81368	-20748	-80829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTATCTCCACAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	116024806	116063558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_116024867_116046696_116046881_116063452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019972	chr5	+	649	4	ISM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	57488	0	91	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTCCTGTTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	116046696	116144926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_116046881_116063452_116063559_116064517_116064560_116144609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019973	chr5	+	1370	3	ISM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	89126	1724	89126	316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCCACCCCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	116135731	116145242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_116135913_116143840_116144151_116144363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019974	chr5	+	327	1	ISM	ENSMUSG00000029516.20	ENSMUST00000051704.15	9514	47	160897	2080	97994	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTCCTGTTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	116144599	116144926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_116144600_116144900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019975	chr5	+	2033	1	Genic_Genomic	ENSMUSG00000029516.20	novel	NA	NA	NA	NA	98372	4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCACTCCCTTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	116144977	116147010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_116145000_116147000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019976	chr5	-	585	1	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	10292	0	10292	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGACTCGGCACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	116152229	116151644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_116151600_116152200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019977	chr5	-	1457	4	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	4342	4	4342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTGACTCGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	116158179	116151648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019978	chr5	-	564	5	ISM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	2814	1342	2814	-1338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTCCATCAAGGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	116159707	116152986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019979	chr5	-	706	1	NIC	ENSMUSG00000084992.2	novel	865	3	NA	NA	1720	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAAGAAGCAAAACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	116165175	116164469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_116164500_116165200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019980	chr5	-	506	4	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	151824	0	151824	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGAGCACCCCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	116275151	116269082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_116269273_116272086_116272219_116274388_116274512_116275090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019981	chr5	-	411	5	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	142732	3046	142732	-3046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATAGTGAAAGGGGACG	NA	NA	NA	NA	NA	NA	NA	NA	116284243	116272128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_116272219_116274388_116274512_116275090_116275154_116278837_116278910_116284180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019982	chr5	-	383	3	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	131211	9755	131211	-9755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAATTCTGAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	116295764	116278837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_116278910_116284180_116284266_116295538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019983	chr5	-	508	4	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	116367	15098	116367	-15098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTACCGTAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116310608	116284180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_116284266_116295538_116295763_116301541_116301633_116310500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019984	chr5	-	722	4	ISM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	108	49779	108	-11578	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGGCCCCACCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	116426867	116318861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_116318971_116328118_116328290_116363327_116363408_116426505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019985	chr5	-	1820	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCTTCATTTAGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	116560925	116546547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_116547550_116553465_116553530_116560171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019986	chr5	-	1795	3	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	116560913	116546549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_116547539_116553465_116553530_116560171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019987	chr5	-	1746	3	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	116560860	116546549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_116547539_116553461_116553530_116560171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019988	chr5	-	799	1	ISM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	23520	0	23520	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCACGTGGTCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117230543	117229744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_117229700_117230500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019989	chr5	+	269	2	ISM	ENSMUSG00000061288.14	ENSMUST00000111975.3	2172	8	637	22872	637	-22872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGCCTCAAGCTCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	117379161	117389060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117379296_117388925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019990	chr5	+	284	2	ISM	ENSMUSG00000061288.14	ENSMUST00000111975.3	2172	8	23103	7925	23103	-7925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTACAGACCAAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	117401627	117404007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117401870_117403965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019991	chr5	+	209	1	ISM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	154880	0	34549	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCCTGGCTGTGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	117413073	117413282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117413100_117413300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019992	chr5	-	661	1	Genic_Genomic	ENSMUSG00000032959.13	novel	NA	NA	NA	NA	4274	5	mono-exon	FALSE	NA	NA	NA	NA	NA	505	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGTATTTCCTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117421374	117420713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_117420700_117421400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019993	chr5	-	1044	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	1	195	1	-195	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCCCATCTTAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	117425689	117420913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019994	chr5	-	600	2	NNC	ENSMUSG00000032959.13	novel	1240	4	NA	NA	1798	217	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACAAGGAAACTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	117423850	117420986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_117421531_117423794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019995	chr5	-	711	3	NNC	ENSMUSG00000032959.13	novel	1240	4	NA	NA	1336	166	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAGGATCAGGTCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	117424312	117421037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_117421531_117423785_117423887_117424195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019996	chr5	+	781	1	FSM	ENSMUSG00000106714.2	ENSMUST00000201584.2	2592	1	1812	-1	1812	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCAGTGCCACTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	117439765	117440546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_117439800_117440500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019997	chr5	+	356	2	ISM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	83	6916	83	-6916	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTCAACGATGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	117501669	117508956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117501825_117508755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019998	chr5	+	278	2	ISM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	7170	6685	7170	-6685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCGTGAGAGATCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	117508756	117509187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117509001_117509153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000019999	chr5	+	268	2	ISM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	12249	1214	12249	-1214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCAGATGACAGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	117513835	117514658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117514007_117514561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020000	chr5	+	321	2	ISM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	13192	182	13192	-182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACCAGTGTGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	117514778	117515690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117514864_117515454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020001	chr5	+	248	1	ISM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	21050	0	14832	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	117516418	117516666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117516400_117516700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020002	chr5	+	609	2	ISM	ENSMUSG00000029361.19	ENST00000618760.4	5295	30	102	86789	-4	-86526	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGAGGTCTGGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	117979910	118005352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_117980081_118004913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020003	chr5	+	587	3	ISM	ENSMUSG00000029361.19	ENSMUST00000171055.2	4388	28	408	59928	408	-59928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTTAAGGTCAAGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	118005591	118031950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_118005992_118017348_118017476_118031890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020004	chr5	+	493	3	ISM	ENSMUSG00000029361.19	ENSMUST00000171055.2	4388	28	69382	10478	69382	-10478	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGCATCTGAGGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	118074565	118081400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_118074678_118076201_118076372_118081189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020005	chr5	+	2043	1	ISM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	31429	0	31375	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGACCTGCCCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	118146223	118148266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_118146200_118148300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020006	chr5	+	196	3	ISM	ENSMUSG00000029359.14	ENST00000541210.5	618	6	147	4577	147	-4577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACACCACCCTGGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	118166009	118192977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_118166053_118184379_118184450_118192894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020007	chr5	+	189	2	ISM	ENSMUSG00000029359.14	ENST00000541210.5	618	6	27031	3065	27031	-3065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTATAGAAATGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118192893	118194489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_118193035_118194441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020008	chr5	+	220	3	ISM	ENSMUSG00000029359.14	ENST00000541210.5	618	6	28577	0	28577	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGTGCCAGAGGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	118194439	118197554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_118194504_118194601_118194710_118197506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020009	chr5	-	332	1	Genic_Genomic	ENSMUSG00000032867.9	novel	NA	NA	NA	NA	90169	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTCGTGTCACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	118203360	118203028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_118203000_118203400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020010	chr5	-	392	2	ISM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	59734	27544	59734	-27544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGAAACAAGGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	118233795	118230573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_118230768_118233597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020011	chr5	+	1696	1	ISM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	19171	0	19171	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTTACAGTGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	118402462	118404158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_118402500_118404200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020012	chr5	+	301	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	8	78231	8	-78231	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCAGTACCCCCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	120256731	120257821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120256908_120257696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020013	chr5	+	232	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	1245	77686	1245	-77686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGAGTCCCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	120257968	120258366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120257996_120258161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020014	chr5	+	419	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	1454	74865	1454	-74865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGCCCCAGGAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120258177	120261187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120258367_120260957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020015	chr5	+	309	3	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	4313	73244	4313	-73244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGAAATGCTCACGGGA	NA	NA	NA	NA	NA	NA	NA	NA	120261036	120262808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120261215_120262215_120262297_120262758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020016	chr5	+	318	3	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	6042	70849	6042	-70849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGAGAAGCTTTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	120262765	120265203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120262838_120264238_120264311_120265029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020017	chr5	+	452	3	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	8305	67159	8305	-67159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTCACCTCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	120265028	120268893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120265231_120266248_120266380_120268774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020018	chr5	+	213	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	12491	65742	12491	-65742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTTTACAGCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	120269214	120270310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120269316_120270198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020019	chr5	+	312	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	13475	64945	13475	-64945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGCCGCTGATCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	120270198	120271107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120270310_120270906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020020	chr5	+	316	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	14200	64095	14200	-64095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGGTCACCATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	120270923	120271957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120271108_120271825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020021	chr5	+	360	3	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	15100	57389	15100	-57389	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATCCACATGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120271823	120278663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120271958_120278274_120278439_120278601
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020022	chr5	+	223	2	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	25338	22023	25338	-22023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGCTACCCCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	120282061	120314029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120282179_120313923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020023	chr5	+	335	3	ISM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	57198	0	57198	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGTGCATGGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	120313921	120336052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120314030_120324282_120324404_120335946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020024	chr5	+	715	1	ISM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	81802	0	79608	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGTCACTCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	120336331	120337046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120336300_120337000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020025	chr5	-	1152	1	Genic_Genomic	ENSMUSG00000029598.13	novel	NA	NA	NA	NA	19197	5	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTTTGCATTTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	120622493	120621341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_120621300_120622500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020026	chr5	-	1460	3	ISM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	16828	1410	16828	-1410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGTGCCTTGATTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120624862	120622756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_120623904_120624104_120624268_120624712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020027	chr5	+	150	2	ISM	ENSMUSG00000032754.15	ENSMUST00000111890.9	2775	15	-18	20817	-18	-19855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTCCTGTCTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	120649281	120651267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120649349_120651184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020028	chr5	+	179	2	ISM	ENSMUSG00000032754.15	ENSMUST00000111889.2	1624	14	109	13330	109	-13330	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATCTTCTGCTACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	120651316	120657792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120651398_120657694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020029	chr5	+	162	2	NIC	ENSMUSG00000032754.15	novel	2661	14	NA	NA	7461	-12179	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGGTGAGCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	120658668	120658943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_120658726_120658838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020030	chr5	+	202	2	ISM	ENSMUSG00000032754.15	ENSMUST00000111889.2	1624	14	11132	7257	11132	-7257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTACCGCCCCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120662339	120663865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120662400_120663723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020031	chr5	+	173	2	ISM	ENSMUSG00000032754.15	ENSMUST00000111889.2	1624	14	14600	3495	14600	-3495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGGTGGTGAACATAT	NA	NA	NA	NA	NA	NA	NA	NA	120665807	120667627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120665928_120667574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020032	chr5	+	143	1	ISM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	22714	0	20739	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	120671946	120672089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120671900_120672100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020033	chr5	-	302	1	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	54219	0	54219	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCAGCCTTTGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	120672519	120672217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_120672200_120672500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020034	chr5	-	334	2	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	3258	26088	3258	-24317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAGGCGGCAATCTACC	NA	NA	NA	NA	NA	NA	NA	NA	120723480	120698305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_120698409_120723249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020035	chr5	-	846	1	ISM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	2686	0	2436	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTAGTGTGTTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	120747968	120747122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_120747100_120748000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020036	chr5	-	1042	2	ISM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	949	126	699	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGAGGCTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	120749705	120747248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_120748028_120749442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020037	chr5	+	668	5	ISM	ENSMUSG00000029602.12	ENST00000261729.9	2257	19	9162	8604	9162	-8604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTGTGTGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	120802029	120808477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020038	chr5	+	699	5	ISM	ENSMUSG00000029602.12	ENST00000261729.9	2257	19	11528	3489	11528	-3489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTTGGGGCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	120804395	120813592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020039	chr5	-	416	2	FSM	ENSMUSG00000032661.10	ENST00000680966.1	411	2	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTTGGTCCTGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	120912220	120910936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_120911064_120911931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020040	chr5	+	504	1	ISM	ENSMUSG00000029605.17	ENSMUST00000183291.2	1837	6	11022	0	11022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120961724	120962228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_120961700_120962200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020041	chr5	-	808	1	ISM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	60057	0	59989	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTTGGTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	121269403	121268595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121268600_121269400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020042	chr5	-	936	3	ISM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	53797	2877	53797	-2877	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACAGATTGACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	121275595	121271480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121272210_121272798_121272890_121275479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020043	chr5	+	1271	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGACTATAGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	121342543	121347305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020044	chr5	+	135	1	FSM	ENSMUSG00000064841.3	ENSMUST00000082907.3	134	1	-1	0	-1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCGAGATTCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	121343071	121343206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_121343100_121343200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020045	chr5	+	2281	2	ISM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	144420	0	144420	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGACTGACCTAAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	121502999	121506659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121503153_121504531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020046	chr5	+	2130	1	NIC	ENSMUSG00000042744.17	novel	15239	76	NA	NA	145950	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGACTGACCTAAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	121504529	121506659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_121504500_121506700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020047	chr5	-	574	1	ISM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	13334	0	13273	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTTTCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	121510361	121509787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121509800_121510400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020048	chr5	-	960	3	ISM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	12165	131	12104	-126	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCATGCTGCCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	121511530	121509918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121510476_121510665_121510739_121511200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020049	chr5	-	616	2	ISM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	6669	6006	6669	-6006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTTCTTTTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	121516965	121515798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121516008_121516558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020050	chr5	+	2607	2	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	41439	82	41439	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTATATTTTGCAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	121577437	121580390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121577545_121577890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020051	chr5	+	2573	1	ISM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	41901	0	41901	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGGTTTGTTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	121577899	121580472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121577900_121580500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020052	chr5	-	1960	1	ISM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	9723	0	9713	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCATATGTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	121580846	121578886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121578900_121580800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020053	chr5	-	2316	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	72	2816	62	1116	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTGCTAATATTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	121590497	121581702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_121583636_121585203_121585343_121590253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020054	chr5	-	1097	2	FSM	ENSMUSG00000029616.10	ENSMUST00000052590.8	1123	2	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	121590533	121582818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_121583636_121590253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020055	chr5	-	821	1	NIC	ENSMUSG00000029616.10	novel	5204	3	NA	NA	6920	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	121583639	121582818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_121582800_121583600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020056	chr5	+	805	7	ISM	ENSMUSG00000029452.19	ENST00000355445.7	870	8	1035	-5	1035	5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAACCTACTGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	121602888	121633198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121602926_121605916_121606049_121627264_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020057	chr5	-	300	1	Genic_Genomic	ENSMUSG00000029455.15	novel	NA	NA	NA	NA	14399	4	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCGTGGTGCCTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	121704385	121704085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_121704100_121704400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020058	chr5	-	533	3	ISM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	23061	1739	9958	-1739	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTTCAACCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	121708826	121705828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121706087_121706988_121707104_121708666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020059	chr5	-	385	3	ISM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	21637	2958	8534	1331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGAGTGGCAGGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	121710250	121707047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121707104_121708666_121708825_121710079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020060	chr5	-	448	1	NIC	ENSMUSG00000029455.15	novel	3867	13	NA	NA	9958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTCTCTGGCAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	121708826	121708378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_121708400_121708800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020061	chr5	-	968	7	ISM	ENSMUSG00000029455.15	ENST00000416293.7	1155	9	4152	0	4152	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGCTGCTCCTCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	121714632	121708665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020062	chr5	-	323	3	ISM	ENSMUSG00000029455.15	ENST00000416293.7	1155	9	2298	5292	2298	-5292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGGCTTGCTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	121716486	121713957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121714088_121714519_121714632_121716405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020063	chr5	-	335	3	ISM	ENSMUSG00000029455.15	ENSMUST00000129753.8	1799	11	13834	6141	975	-5854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTACCAGCCCCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121717809	121714519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121714632_121716405_121716486_121717666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020064	chr5	-	333	3	ISM	ENSMUSG00000029455.15	ENSMUST00000129753.8	1799	11	12856	8026	-3	-7739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGCTTTGTTCTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	121718787	121716404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121716486_121717666_121717808_121718676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020065	chr5	-	503	3	ISM	ENSMUSG00000029455.15	ENSMUST00000129753.8	1799	11	-37	9287	-37	-9000	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCCTCAGTCTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	121731680	121717665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121717808_121718676_121718782_121731424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020066	chr5	-	1198	1	Genic_Genomic	ENSMUSG00000042647.14	novel	NA	NA	NA	NA	20967	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGATCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	121736034	121734836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_121734800_121736000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020067	chr5	+	758	5	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	120	15098	120	-15082	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGAAAGGGCTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121798780	121810226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020068	chr5	+	748	5	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	1197	11864	1197	-11864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCAGGGGCTGCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	121800128	121813444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020069	chr5	+	1298	4	ISM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	22180	234	21909	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCTCCCCTTTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	121820840	121825090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121820933_121822433_121822538_121823191_121823539_121824335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020070	chr5	+	849	2	ISM	ENSMUSG00000029458.15	ENSMUST00000111765.8	3861	12	23527	1347	23527	-1347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGAAGGTCTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	121822458	121823961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121822538_121823191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020071	chr5	+	808	1	Genic_Genomic	ENSMUSG00000029458.15	novel	NA	NA	NA	NA	25593	8	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGGACGGAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	121824524	121825332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_121824500_121825300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020072	chr5	+	734	3	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	-364	55706	22	-55706	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGTTGTAAGTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	121849693	121885523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121850340_121883785_121883823_121885472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020073	chr5	+	566	4	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	37082	25060	37036	-25060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAACATGATTCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	121887139	121916169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121887293_121910729_121910852_121915432_121915525_121915970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020074	chr5	+	594	4	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	60670	23569	60624	-23569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATTTTGACCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	121910727	121917660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121910852_121915432_121915525_121915970_121916169_121917480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020075	chr5	+	755	4	NNC	ENSMUSG00000042605.17	novel	2956	20	NA	NA	65864	-19149	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCAGTGGTCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	121915967	121922080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_121916169_121917480_121917664_121919395_121919606_121921919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020076	chr5	+	593	3	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	69336	17754	69290	-17754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAACCAACACCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	121919393	121923475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121919606_121921919_121922103_121923277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020077	chr5	+	549	4	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	71860	16775	71814	-16775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATTTTAGGGTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	121921917	121924454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121922103_121923277_121923476_121923821_121923930_121924396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020078	chr5	+	690	4	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	73219	7917	73173	-7917	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAACCTGGGTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	121923276	121933312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121923476_121923821_121923930_121924396_121924468_121933000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020079	chr5	+	601	4	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	74337	5791	74291	-5791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCCATGGGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	121924394	121935438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121924468_121933000_121933312_121934435_121934500_121935285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020080	chr5	+	520	5	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	83068	1030	83022	-1030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTCCGCGGCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	121933125	121940199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020081	chr5	+	613	4	ISM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	85233	0	85187	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAGGTATAGTGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	121935290	121941229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121935439_121935787_121935849_121940143_121940329_121941010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020082	chr5	+	468	3	ISM	ENSMUSG00000042605.17	ENST00000673283.1	3462	23	98872	1102	98872	-884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCACCCTTCAGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	121948975	121951603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121949060_121949447_121949676_121951447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020083	chr5	+	948	3	ISM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	99452	-9	99406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	121949509	121953013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_121949676_121951447_121951617_121952400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020084	chr5	+	616	1	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	102294	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	121952397	121953013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_121952400_121953000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020085	chr5	-	1733	1	Genic_Genomic	ENSMUSG00000042594.17	novel	NA	NA	NA	NA	18725	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCACCACAGAAACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121955442	121953709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_121953700_121955400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020086	chr5	-	1222	3	ISM	ENSMUSG00000042594.17	ENSMUST00000122426.8	2777	9	17469	205	17469	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTACTAGGACCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	121956698	121955277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_121956157_121956278_121956451_121956527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020087	chr5	+	1817	1	Genic_Genomic	ENSMUSG00000044134.10	novel	NA	NA	NA	NA	3822	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCACAGTTGATATATT	NA	NA	NA	NA	NA	NA	NA	NA	121990879	121992696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_121990900_121992700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020088	chr5	+	2721	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTATGGGTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	122492428	122503049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020089	chr5	+	153	1	ISM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	8766	1697	8713	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTGAAAACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122501197	122501350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122501200_122501400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020090	chr5	-	347	1	Genic_Genomic	ENSMUSG00000029463.6	novel	NA	NA	NA	NA	7443	5	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATTATCTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	122502984	122502637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_122502600_122503000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020091	chr5	-	555	3	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	4842	43	4842	-43	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTAGCTAGAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	122505585	122502685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122502983_122504376_122504460_122505410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020092	chr5	-	352	3	NNC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	4633	-1774	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTTTAGAAGACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	122505794	122504416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_122504460_122505410_122505583_122505657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020093	chr5	-	403	3	NNC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	2722	-2797	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGCGACCCCTGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	122507705	122505439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_122505583_122505657_122505792_122507579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020094	chr5	-	623	4	ISM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	171	3018	171	-3018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTACCTCCATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	122510256	122505660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122505792_122507579_122507702_122508577_122508637_122509945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020095	chr5	+	463	3	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	22	4266	22	-4266	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAACAACTTGAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	122510535	122516699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122510720_122511973_122512083_122516529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020096	chr5	+	697	3	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	8947	171	8947	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAATTATTGTAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122519460	122520794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122519558_122520110_122520240_122520323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020097	chr5	+	489	1	ISM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	9963	0	9963	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	122520476	122520965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122520500_122521000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020098	chr5	+	337	4	ISM	ENSMUSG00000029465.15	ENSMUST00000031421.12	736	7	1002	1850	1002	-1850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTATGCCAAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	122534878	122542276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122534980_122539709_122539787_122541421_122541491_122542186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020099	chr5	+	342	4	ISM	ENSMUSG00000029465.15	ENSMUST00000111713.2	708	6	1275	959	1275	-885	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGATGTCCCCTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	122539735	122543241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122539787_122541421_122541491_122542186_122542314_122543146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020100	chr5	+	535	3	ISM	ENSMUSG00000029465.15	ENSMUST00000111713.2	708	6	3724	-42	3724	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGTACCGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	122542184	122544242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122542314_122543146_122543242_122543931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020101	chr5	+	313	1	NIC	ENSMUSG00000029465.15	novel	899	7	NA	NA	5469	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGTACCGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	122543929	122544242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_122543900_122544200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020102	chr5	+	1370	3	ISM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	17695	62	17658	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGGCTGCATAGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	122578201	122582913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122578374_122579352_122579504_122581866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020103	chr5	+	1118	1	NIC	ENSMUSG00000029466.12	novel	2950	12	NA	NA	21314	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACCAGTGTGAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	122581857	122582975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_122581900_122583000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020104	chr5	-	634	3	ISM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	41247	3236	40917	-3236	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTGCCTGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	122599041	122597638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122597714_122598038_122598260_122598703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020105	chr5	-	1002	1	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	63313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTTTTTACTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	122689268	122688266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_122688300_122689300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020106	chr5	+	425	4	ISM	ENSMUSG00000029470.16	ENSMUST00000139631.8	1030	10	11475	1078	11475	-1078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAAGGCATATGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	122857191	122865308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122857290_122863052_122863195_122863292_122863430_122865260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020107	chr5	+	458	2	ISM	ENSMUSG00000029470.16	ENSMUST00000139631.8	1030	10	20090	-324	20090	324	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAACTCCAAGACATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	122865806	122866710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122865904_122866349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020108	chr5	+	422	1	ISM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	21080	693	20970	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTGTCTGTGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	122866686	122867108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_122866700_122867100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020109	chr5	-	928	2	ISM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	41828	203	41820	-203	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATAGTCAGGAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	122875568	122871453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122872309_122875495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020110	chr5	-	876	3	ISM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	29580	-1	29521	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCATCCTCTTAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	122929822	122925520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122926082_122926364_122926528_122929670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020111	chr5	-	291	1	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	33260	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCTGAAGTGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122926083	122925792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_122925800_122926100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020112	chr5	-	320	3	ISM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	29338	686	29338	-678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTAGCCGACGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	122930005	122926471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122926528_122929670_122929819_122929889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020113	chr5	-	295	3	ISM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	27723	3967	27723	-3959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAAGCTCTGGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	122931620	122929752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122929819_122929889_122929998_122931499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020114	chr5	-	291	3	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	21803	5755	21803	-5751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACAGGAATCACAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	122937540	122931544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122931622_122932479_122932555_122937401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020115	chr5	-	336	3	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	20686	6709	20686	-6705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTCAGCACGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	122938657	122932498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122932555_122937401_122937538_122938513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020116	chr5	-	290	3	ISM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	19074	11688	19060	-11688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGCGGGTGTGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	122940283	122937481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122937538_122938513_122938657_122940192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020117	chr5	-	323	3	ISM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	18382	12720	18368	-12720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCTCCAGGCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	122940975	122938513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122938657_122940192_122940283_122940885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020118	chr5	-	369	3	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	14839	14403	14839	-14399	internal_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCATCTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122944504	122940192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122940283_122940885_122940968_122944307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020119	chr5	-	548	4	ISM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	3272	18518	3272	-18514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGATAACTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	122956071	122944307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122944499_122945362_122945465_122952611_122952679_122955883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020120	chr5	-	722	4	ISM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	-33	30090	12	-30090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTCGGGTTTCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	122959390	122955883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_122956068_122956916_122957027_122957670_122957751_122959042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020121	chr5	+	1694	2	ISM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	17069	1766	17069	-1766	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTCCATCACCTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	123005179	123007588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_123005385_123006099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020122	chr5	+	1523	1	Genic_Genomic	ENSMUSG00000029474.8	novel	NA	NA	NA	NA	19722	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCAGATGGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	123007832	123009355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_123007800_123009400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020123	chr5	-	309	1	Genic_Genomic	ENSMUSG00000029475.18	novel	NA	NA	NA	NA	14610	18	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCCTGCCCCACCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	123075354	123075045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_123075000_123075400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020124	chr5	-	573	3	ISM	ENSMUSG00000029475.18	ENST00000543852.5	1020	5	4017	189	4017	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACAACTCCATTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	123085947	123075252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123075552_123079015_123079132_123085789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020125	chr5	-	503	4	ISM	ENSMUSG00000029475.18	ENST00000543852.5	1020	5	30	3951	30	-3951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGGCACCTTCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	123089934	123079014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123079132_123085789_123085944_123087132_123087227_123089796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020126	chr5	-	296	3	NNC	ENSMUSG00000029475.18	novel	1020	5	NA	NA	90	-10750	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACACCTTTTTCATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	123089874	123085813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_123085944_123087132_123087227_123089802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020127	chr5	-	315	3	NNC	ENSMUSG00000029475.18	novel	1020	5	NA	NA	22	-10809	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGACATCTTTCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	123089942	123085872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_123085944_123087132_123087227_123089792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020128	chr5	+	1340	1	FSM	ENSMUSG00000104951.2	ENSMUST00000200411.2	1566	1	273	-47	273	47	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGATGTGATGGACAATC	NA	NA	NA	NA	NA	NA	NA	NA	123249031	123250371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_123249000_123250400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020129	chr5	+	1268	4	ISM	ENSMUSG00000054434.15	ENST00000540377.1	868	5	10678	-490	10678	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTGTGACCCTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	123253159	123255744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_123253256_123253723_123253789_123254264_123254334_123254706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020130	chr5	+	1109	1	NIC	ENSMUSG00000054434.15	novel	2164	12	NA	NA	12222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCCTGCCCAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123254703	123255812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_123254700_123255800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020131	chr5	-	556	3	FSM	ENSMUSG00000090086.8	ENST00000538335.1	549	3	-1	-6	-1	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACACCAGAACCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	123280178	123277923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_123278037_123279416_123279460_123279778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020132	chr5	+	2571	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCCTCTTGGGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	123366278	123388194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020133	chr5	+	501	4	ISM	ENSMUSG00000029440.16	ENST00000261817.6	540	5	-1	2050	-1	-2050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGCTGGGCTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	123372655	123384345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_123372760_123377604_123377814_123379894_123379997_123384259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020134	chr5	+	899	5	ISM	ENSMUSG00000063409.13	ENST00000339777.5	1320	7	12	2932	12	-2932	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTAGTGGGCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	123630293	123638447	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_123630544_123632263_123632375_123634941_123635082_123637490_123637730_123638288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020135	chr5	+	881	5	ISM	ENSMUSG00000063409.13	ENST00000339777.5	1320	7	1981	2023	1981	-2023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAAAGATAGACATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	123632262	123639356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_123632375_123634941_123635082_123637490_123637730_123638288_123638457_123639134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020136	chr5	+	782	4	ISM	ENSMUSG00000063409.13	ENST00000339777.5	1320	7	7208	26	7208	-26	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTGTGAGCATCGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	123637489	123641353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_123637730_123638288_123638457_123639134_123639394_123641238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020137	chr5	-	1475	5	ISM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	792	-2	0	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTTCAGAATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	123661447	123649765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020138	chr5	-	1220	3	ISM	ENSMUSG00000029433.17	ENST00000353548.11	579	4	5310	-762	5310	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	123656137	123649767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123650771_123655799_123655897_123656017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020139	chr5	-	1175	5	FSM	ENSMUSG00000029433.17	ENST00000443649.9	1174	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGTATCCACCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	123662726	123650528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123662133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020140	chr5	-	265	1	NIC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	10654	1	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGTATCCACCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	123650793	123650528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_123650500_123650800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020141	chr5	-	1123	5	NNC	ENSMUSG00000029433.17	novel	1174	5	NA	NA	36	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATGGTATCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123662690	123650529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658221_123662133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020142	chr5	-	580	4	FSM	ENSMUSG00000029433.17	ENST00000353548.11	579	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGATGGTATCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	123661448	123650529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123661317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020143	chr5	-	484	3	ISM	ENSMUSG00000029433.17	ENST00000267169.11	758	5	5317	14	5317	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGGGGAAAGCGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	123656130	123650543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123650794_123655775_123655897_123656017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020144	chr5	-	296	3	ISM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	4029	127	3280	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTATTTAGTTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	123658167	123655775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123655897_123656017_123656129_123658103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020145	chr5	-	2352	1	Genic_Genomic	ENSMUSG00000029427.12	novel	NA	NA	NA	NA	20401	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTTCCTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123838706	123836354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_123836400_123838700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020146	chr5	-	298	1	ISM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	20666	0	4903	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	123866786	123866488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123866500_123866800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020147	chr5	-	629	4	FSM	ENSMUSG00000029422.16	ENST00000559166.1	556	4	10	-83	10	83	multi-exon	TRUE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCATGGGTGTTGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	123871679	123867165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_123867420_123868517_123868608_123869099_123869324_123871618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020148	chr5	-	309	2	ISM	ENSMUSG00000029422.16	ENSMUST00000182489.8	1665	11	15750	2018	-4	-1850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCTTGTGTACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	123871693	123869098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123869333_123871618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020149	chr5	-	329	2	ISM	ENSMUSG00000029422.16	ENSMUST00000111515.8	4223	8	9715	3190	-6071	-3190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTATCTTTTCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	123877760	123874621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123874745_123877554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020150	chr5	-	417	2	ISM	ENSMUSG00000029422.16	ENSMUST00000111515.8	4223	8	8526	6125	-7260	-6125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTAAGTGTTTATTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	123878949	123877556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123877759_123878734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020151	chr5	-	336	3	ISM	ENSMUSG00000029422.16	ENSMUST00000111515.8	4223	8	5731	7302	5690	-7302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTAGTTTTGCTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	123881744	123878733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_123878948_123880841_123880920_123881700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020152	chr5	+	851	3	ISM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	17580	968	17580	-968	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACTTTGTCACAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	124062817	124065930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124062911_124065060_124065201_124065312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020153	chr5	+	663	1	Genic_Genomic	ENSMUSG00000023106.16	novel	NA	NA	NA	NA	20999	1	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGCTAACTGAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	124066236	124066899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_124066200_124066900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020154	chr5	+	1227	5	FSM	ENSMUSG00000105875.2	ENST00000537566.5	1222	5	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGCGCAATGAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	124072126	124092809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_124072328_124074451_124074583_124089261_124089351_124089814_124089931_124092119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020155	chr5	+	1215	5	NNC	ENSMUSG00000105875.2	novel	1222	5	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTCAGCGCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	124072128	124092805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_124072328_124074451_124074583_124089261_124089351_124089814_124089925_124092119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020156	chr5	-	860	1	ISM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	26770	0	26770	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124143563	124142703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_124142700_124143600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020157	chr5	+	839	1	ISM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	31092	0	31092	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGAGTATCTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	124142782	124143621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124142800_124143600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020158	chr5	-	893	3	ISM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	21529	1342	21529	-1342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAAAGATTACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	124148804	124144045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_124144802_124145671_124145755_124148750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020159	chr5	+	283	2	ISM	ENSMUSG00000023707.14	ENSMUST00000119269.6	1474	7	2239	565	2235	405	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTTCGGTGACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	124252622	124252974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124252709_124252777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020160	chr5	+	1185	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	124254168	124256259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020161	chr5	+	951	5	NNC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	89	18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGCTGTTGGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	124254273	124256126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255967_124256047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020162	chr5	+	478	2	ISM	ENSMUSG00000029404.16	ENST00000315580.10	733	5	2	856	2	-856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTACCATGGCGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	124254496	124255252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124254675_124254952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020163	chr5	+	652	5	FSM	ENSMUSG00000029404.16	ENST00000426960.6	661	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCATCCCAGGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124254517	124256108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_124254642_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020164	chr5	+	338	2	ISM	ENSMUSG00000029404.16	ENST00000426960.6	661	5	443	742	443	-742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATGAAACCCATGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	124254951	124255366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124255257_124255333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020165	chr5	-	579	1	ISM	ENSMUSG00000029406.16	ENST00000280562.9	6615	26	97156	0	67914	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124257331	124256752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_124256800_124257300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020166	chr5	-	647	2	ISM	ENSMUSG00000029406.16	ENST00000280562.9	6615	26	95726	1201	66484	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTCAGATGCAGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	124258761	124257953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_124258522_124258682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020167	chr5	+	1210	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	48	419	48	-419	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACCTTTTAAAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	124466208	124479488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_124466293_124476689_124476999_124478671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020168	chr5	+	909	1	ISM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	12838	0	12838	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCGAGGAAGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	124478998	124479907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124479000_124479900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020169	chr5	-	554	1	ISM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	8701	0	4284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAGGTCTTAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	124484033	124483479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_124483500_124484000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020170	chr5	-	599	2	ISM	ENSMUSG00000029394.12	ENSMUST00000111473.8	715	3	1556	-90	1556	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAAGTCAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	124486761	124483716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_124484218_124486663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020171	chr5	-	530	3	ISM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	45	3186	45	-2576	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGCGTGGTTAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	124492689	124486665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_124486791_124488140_124488236_124492379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020172	chr5	+	200	1	ISM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	22179	0	14910	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	124600171	124600371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124600200_124600400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020173	chr5	-	1392	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGCATGTGTATCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	124616428	124601325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020174	chr5	+	649	2	Antisense	novelGene_ENSMUSG00000029401.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGACAGGAGGCGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	124601332	124606756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_+_124601877_124606651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020175	chr5	+	358	1	ISM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	7633	0	7309	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGAGGTGGGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	124628829	124629187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124628800_124629200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020176	chr5	+	635	3	ISM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	11	3505	11	-3505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAGTTACGGGCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	124678768	124685064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124679105_124681034_124681228_124684958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020177	chr5	+	590	3	ISM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	2301	1113	2301	-1113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTCTTACTTGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	124681058	124687456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124681228_124684958_124685067_124687143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020178	chr5	+	243	1	ISM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	9568	1	9568	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTTTTATATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	124688325	124688568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124688300_124688600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020179	chr5	+	397	1	ISM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	16400	0	16350	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATCATTTTTTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	124707326	124707723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124707300_124707700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020180	chr5	-	528	1	Genic_Genomic	ENSMUSG00000029388.15	novel	NA	NA	NA	NA	8392	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGGCTATGTGAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	124708802	124708274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_124708300_124708800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020181	chr5	-	890	5	NNC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	4420	-641	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTACGTCTGGCTTCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	124712774	124708916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020182	chr5	+	345	3	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	3319	13376	3319	-13376	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCTGGCTATTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	124720521	124722367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124720591_124721996_124722104_124722198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020183	chr5	+	322	3	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	4809	8993	4809	-8993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCCTTGTGCTAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	124722011	124726750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124722104_124722198_124722366_124726687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020184	chr5	+	336	2	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	16668	1459	16668	-1459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTGAAGCCCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	124733870	124734284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124733903_124733980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020185	chr5	+	318	1	Genic_Genomic	ENSMUSG00000029387.11	novel	NA	NA	NA	NA	18224	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTTGTTGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	124735426	124735744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_124735400_124735700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020186	chr5	+	375	3	ISM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	24265	1940	24265	-1940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACGAGGTAAGCCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	124761076	124763863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124761177_124762380_124762538_124763745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020187	chr5	+	325	1	Genic_Genomic	ENSMUSG00000118662.2	novel	NA	NA	NA	NA	28668	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGGTGGTGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	124765479	124765804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_124765500_124765800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020188	chr5	+	1368	2	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	29793	1567	29793	-1567	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACCCAGGTGTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	124796909	124799952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124797087_124798761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020189	chr5	+	1187	1	ISM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	33216	0	33216	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTAGTTTTCTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124800332	124801519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124800300_124801500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020190	chr5	+	902	1	ISM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	25038	0	25038	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATGTTTCCTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	124964792	124965694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_124964800_124965700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020191	chr5	-	2216	1	Genic_Genomic	ENSMUSG00000008348.10	novel	NA	NA	NA	NA	-830	1	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTGTTGGTTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	125465243	125463027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_125463000_125465200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020192	chr5	+	541	2	Antisense	novelGene_ENSMUSG00000008348.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTTGTAGTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	125463458	125464227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_+_125463526_125463753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020193	chr5	-	2016	2	FSM	ENSMUSG00000008348.10	ENSMUST00000156249.2	2581	2	3	562	3	-89	multi-exon	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTTGCAGGCAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	125467263	125463602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_125465329_125466973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020194	chr5	-	542	2	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	-502	-403	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAGGTCGAGCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	125464915	125463916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_125464127_125464583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020195	chr5	-	840	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	0	1778	0	-1293	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAGAGAATGTCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	125467078	125464806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_125465329_125466760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020196	chr5	+	3271	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	5	3197	5	-3197	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCACGCCTTTAATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125518636	125534237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_125518957_125528733_125528837_125531389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020197	chr5	+	2913	1	ISM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	15890	0	15890	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCTGGATGGATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	125534521	125537434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_125534500_125537400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020198	chr5	+	1459	3	ISM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	38353	0	38353	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTACGCGTGTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	125591230	125594474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_125591292_125591991_125592195_125593279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020199	chr5	+	1779	3	ISM	ENSMUSG00000070498.4	ENST00000613307.1	2256	5	4688	1509	4688	-1509	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCACACTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	125860391	125865309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_125860665_125862904_125863097_125863995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020200	chr5	+	1444	2	NNC	ENSMUSG00000070498.4	novel	2256	5	NA	NA	8443	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCAAAGGGCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	125864146	125866818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_125865479_125866706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020201	chr5	+	894	2	NNC	ENSMUSG00000070498.4	novel	2256	5	NA	NA	8978	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCAAAGGGCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	125864681	125866818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_125865479_125866721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020202	chr5	-	358	1	Genic_Genomic	ENSMUSG00000029416.18	novel	NA	NA	NA	NA	21399	4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCCTGATGGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	127673081	127672723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_127672700_127673100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020203	chr5	-	363	2	ISM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	16836	907	16836	-907	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACTACCAGGGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	127677644	127673634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_127673837_127677483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020204	chr5	-	387	2	ISM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	8353	8948	8353	-8948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGTGAAAGCCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	127686127	127681675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_127681771_127685835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020205	chr5	-	552	2	ISM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	327	13121	327	-13121	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGAGAAGTGGGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	127694153	127685848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_127686126_127693878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020206	chr5	-	360	1	ISM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	23658	0	23619	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGCCTCCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	129061980	129061620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_129061600_129062000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020207	chr5	-	326	3	NNC	ENSMUSG00000029428.14	novel	2769	10	NA	NA	17	-11815	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACCCAGAAGGAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	129085621	129073441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_129073522_129076569_129076652_129085457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020208	chr5	+	1420	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	261	742	-158	724	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTGGTAGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	129097596	129100645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020209	chr5	+	699	5	FSM	ENSMUSG00000029430.14	ENST00000392367.4	698	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCAACTGTCCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	129097754	129099922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_129097833_129097929_129098107_129099066_129099255_129099438_129099610_129099837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020210	chr5	+	847	2	NNC	ENSMUSG00000029430.14	novel	698	5	NA	NA	1725	642	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGATGGACTACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	129099479	129100563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_129099610_129099846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020211	chr5	+	889	1	Genic_Genomic	ENSMUSG00000029430.14	novel	NA	NA	NA	NA	2747	3	mono-exon	FALSE	NA	NA	NA	NA	NA	624	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCATCTCTAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	129100501	129101390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_129100500_129101400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020212	chr5	+	331	2	ISM	ENSMUSG00000044017.17	ENST00000535015.5	2506	22	19343	68743	19343	-68743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCTTCAAAATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	129205981	129209857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_129206177_129209721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020213	chr5	+	1358	3	FSM	ENSMUSG00000034211.15	ENSMUST00000119985.2	859	3	104	-603	104	175	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGATACCAGTGATGATC	NA	NA	NA	NA	NA	NA	NA	NA	129792744	129796114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_129792828_129793790_129793931_129794979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020214	chr5	+	540	3	ISM	ENSMUSG00000034211.15	ENSMUST00000118420.8	843	4	211	226	138	-119	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGAGGCATTTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	129792778	129795235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_129792923_129793790_129793931_129794979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020215	chr5	+	734	2	ISM	ENSMUSG00000034211.15	ENSMUST00000121813.8	868	3	594	356	575	-356	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTTTGCTCACGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	129793215	129794998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_129793931_129794979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020216	chr5	-	693	2	Antisense	novelGene_ENSMUSG00000034211.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAGCACCTAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	129795545	129793799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_129793925_129794977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020217	chr5	+	568	1	NIC	ENSMUSG00000034211.15	novel	5061	4	NA	NA	2337	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGCAGCTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129794977	129795545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_129795000_129795500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020218	chr5	+	1166	1	ISM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	5894	0	5814	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129798454	129799620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_129798500_129799600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020219	chr5	-	771	4	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	16709	0	8433	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGTAGTTTTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	129847804	129842621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020220	chr5	-	596	4	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	8012	5047	-264	-5047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCACACTGGCTTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	129856501	129847668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_129847805_129848539_129848697_129856085_129856313_129856425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020221	chr5	-	956	4	ISM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	7	5917	7	-5917	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGAACCGTCTGTATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	129864506	129848538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_129848697_129856085_129856313_129856425_129856509_129864018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020222	chr5	+	611	5	ISM	ENSMUSG00000029447.14	ENST00000335503.3	1546	13	6917	0	6917	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCTGATTGGAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	129871414	129874741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020223	chr5	+	821	6	FSM	ENSMUSG00000025538.16	ENST00000437307.6	616	6	-1	-204	-1	204	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTAAGTGCAGTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	129878759	129891774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_129878899_129881714_129881827_129882863_129882909_129888677_129888763_129888910_129889056_129891479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020224	chr5	+	174	2	ISM	ENSMUSG00000025538.16	ENST00000395435.7	571	5	2978	2807	2978	-2807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACCTCCTTTCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	129881738	129888763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_129881827_129888677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020225	chr5	+	421	5	ISM	ENSMUSG00000025538.16	ENST00000652303.1	678	7	2983	2807	2983	-2807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACCTCCTTTCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	129881743	129888763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020226	chr5	+	387	4	ISM	ENSMUSG00000025538.16	ENST00000652303.1	678	7	4765	-1	4765	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGAGATCTCCGAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	129883525	129891571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_129883680_129887080_129887137_129888677_129888763_129891479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020227	chr5	+	96	1	NIC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	12715	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGAGATCTCCGAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	129891475	129891571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_129891500_129891600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020228	chr5	+	355	1	Genic_Genomic	ENSMUSG00000025538.16	novel	NA	NA	NA	NA	13779	3	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCCTATCACGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	129892539	129892894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_129892500_129892900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020229	chr5	-	918	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTAGCGTCCTTATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	129916312	129909994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020230	chr5	-	588	3	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	3332	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGCGTCCTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	129912979	129909996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_129910238_129911269_129911412_129912774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020231	chr5	-	638	3	NNC	ENSMUSG00000070493.4	novel	915	4	NA	NA	35	-1271	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGACTTGTCCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	129916276	129911267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_129911418_129912774_129913025_129916038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020232	chr5	+	2484	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	129924571	129932464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020233	chr5	+	2053	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	-53	1112	14	1055	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAAAGTGCCTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	129970757	130012475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_129971207_130007359_130007470_130010981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020234	chr5	+	1800	3	ISM	ENSMUSG00000066735.9	ENST00000648179.1	2208	5	40073	0	40013	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGGAGTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130010980	130015555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130012484_130014139_130014163_130015281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020235	chr5	+	1620	2	NNC	ENSMUSG00000066735.9	novel	4809	2	NA	NA	40193	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGTGGAGTCTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	130011160	130015557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_130012493_130015269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020236	chr5	+	1569	2	NNC	ENSMUSG00000066735.9	novel	2372	5	NA	NA	40237	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGGAGTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	130011204	130015555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_130012493_130015274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020237	chr5	+	1481	2	NNC	ENSMUSG00000066735.9	novel	2372	5	NA	NA	40322	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGGAGTCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	130011289	130015556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_130012484_130015269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020238	chr5	+	630	2	NNC	ENSMUSG00000066735.9	novel	2372	5	NA	NA	41036	-109	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATTTTGCTAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	130012003	130015424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_130012484_130015274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020239	chr5	-	1075	4	ISM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	7518	0	7334	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	NA	NA	NA	NA	NA	NA	NA	130024372	130017851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020240	chr5	-	1972	4	FSM	ENSMUSG00000025534.18	ENSMUST00000111308.8	2038	4	87	-21	87	21	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGGTGTGGGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	130031619	130027478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_130028911_130029201_130029384_130029597_130029784_130031447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020241	chr5	-	373	3	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	11955	-1	11955	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTGAAGAAACCGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	130040974	130040359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_130040542_130040705_130040813_130040890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020242	chr5	-	185	1	NIC	ENSMUSG00000025533.16	novel	1824	17	NA	NA	12385	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCTGAAGAAACCGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	130040544	130040359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_130040400_130040500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020243	chr5	-	333	4	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	11031	345	11031	-345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCGGACCCCTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	130041898	130040705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_130040813_130040890_130040972_130041497_130041582_130041837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020244	chr5	-	313	4	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	10832	530	10832	-530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTGAAGCAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	130042097	130040890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_130040972_130041497_130041582_130041837_130041898_130042009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020245	chr5	-	317	4	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	10070	1476	10070	-1476	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAACCTGGGAGTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	130042859	130041836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_130041898_130042009_130042095_130042241_130042357_130042803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020246	chr5	-	309	4	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	7715	1881	7715	-1881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGTCCATATCTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	130045214	130042241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_130042357_130042803_130042867_130043519_130043573_130045136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020247	chr5	-	319	4	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	5170	4776	5170	-4776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCGTGCGGAGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	130047759	130045136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_130045215_130047150_130047249_130047388_130047446_130047673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020248	chr5	-	320	3	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	7	7312	7	-7312	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACACACCCTTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	130052922	130047672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_130047758_130048502_130048698_130052882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020249	chr5	+	596	3	ISM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	12914	644	12893	74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGGCAATGTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	130071044	130088986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130071142_130077766_130077825_130088545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020250	chr5	+	421	2	NNC	ENSMUSG00000025532.14	novel	931	5	NA	NA	19617	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAGAAAGGCTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	130077768	130088917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_130077825_130088552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020251	chr5	+	486	1	Genic_Genomic	ENSMUSG00000025532.14	novel	NA	NA	NA	NA	30996	3	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACCATACCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	130089147	130089633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_130089100_130089600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020252	chr5	+	1964	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	49	37	49	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTATTTTTCAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	130108259	130164533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020253	chr5	+	1551	5	FSM	ENSMUSG00000034118.16	ENST00000649664.1	1719	5	168	0	168	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAATGTGAAGCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	130130626	130164554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_130131377_130143308_130143508_130158348_130158400_130163299_130163345_130164048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020254	chr5	+	469	1	FSM	ENSMUSG00000080893.2	ENSMUST00000118998.2	402	1	42	-109	42	109	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATCTAATTGAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	130217277	130217746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_130217300_130217700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020255	chr5	+	1157	5	ISM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	19851	908	19851	-908	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAATTCTGTGTCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	130235852	130242270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020256	chr5	+	1121	1	ISM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	41424	0	26061	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGTTTTGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	130242062	130243183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130242100_130243200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020257	chr5	-	1545	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	130284368	130274571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020258	chr5	-	1499	5	NNC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	130284324	130274571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020259	chr5	-	410	3	FSM	ENSMUSG00000025337.11	ENST00000423945.5	404	3	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGGTTCTCTGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	130284195	130275238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_130275303_130279654_130279856_130284050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020260	chr5	+	222	2	ISM	ENSMUSG00000056310.15	ENST00000612372.4	878	7	5	25286	5	-3006	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGTTTCTGTGGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	130295826	130303584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130295926_130303461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020261	chr5	+	512	3	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	69	71409	69	-8301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTATGCTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	130295890	130298289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130295926_130296735_130296935_130298011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020262	chr5	+	449	4	ISM	ENSMUSG00000056310.15	ENSMUST00000044204.12	4698	9	13652	3575	2290	-3575	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTTGCAGGTGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	130298111	130310652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130298289_130303461_130303585_130306773_130306892_130310621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020263	chr5	+	350	3	ISM	ENSMUSG00000056310.15	ENST00000612372.4	878	7	10950	11066	10950	3577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCCTGCTTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	130306771	130317804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130306892_130316083_130316203_130317693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020264	chr5	+	390	3	ISM	ENSMUSG00000056310.15	ENST00000612372.4	878	7	20260	3247	20260	-3247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCCTGAGGAGATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	130316081	130325623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130316203_130317693_130317804_130325464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020265	chr5	+	1642	6	ISM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	21878	-706	21878	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACATGTTCCCATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	130317699	130370404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020266	chr5	+	131	1	NIC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	32919	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAAAGGTAGGAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	130328740	130328871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_130328700_130328900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020267	chr5	+	947	1	NIC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	73636	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACATGTTCCCATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	130369457	130370404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_130369500_130370400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020268	chr5	-	3370	1	FSM	ENSMUSG00000106694.2	ENSMUST00000200788.2	3390	1	22	-2	22	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATCGTGTCATGATATGA	NA	NA	NA	NA	NA	NA	NA	NA	130896656	130893286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_130893300_130896700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020269	chr5	-	310	2	FSM	ENSMUSG00000029673.20	ENST00000643587.1	309	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGCCTGGTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	132353419	132287761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_132287976_132353323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020270	chr5	-	221	1	NIC	ENSMUSG00000029673.20	novel	7410	19	NA	NA	65437	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGCCTGGTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	132287982	132287761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_132287800_132288000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020271	chr5	-	274	2	NNC	ENSMUSG00000029673.20	novel	309	2	NA	NA	30	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAAGCCTGGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	132353389	132287762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_132287976_132353328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020272	chr5	+	179	1	FSM	ENSMUSG00000058905.6	ENSMUST00000145209.2	414	1	344	-109	344	109	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCCAGCAGGCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	133504305	133504484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_133504300_133504500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020273	chr5	-	1215	3	ISM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	20859	0	20859	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACTTGATCATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	134184754	134176892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_134177846_134182962_134183049_134184578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020274	chr5	+	153	2	ISM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	167	26882	167	-26882	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCATGGTGAGACGCT	NA	NA	NA	NA	NA	NA	NA	NA	134213032	134220106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_134213098_134220018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020275	chr5	-	179	1	ISM	ENSMUSG00000060261.17	ENSMUST00000059042.15	4455	35	58756	17992	10587	5	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGATCTGTGAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	134284858	134284679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_134284700_134284900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020276	chr5	-	372	4	ISM	ENSMUSG00000060261.17	ENST00000441415.1	419	5	790	-3	790	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTAAGATCTGTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	134294655	134284681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_134284858_134289420_134289493_134290696_134290756_134294590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020277	chr5	-	249	2	ISM	ENSMUSG00000060261.17	ENSMUST00000173888.8	2820	30	34971	16318	5954	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGGTAAGATCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	134289491	134284684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_134284863_134289420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020278	chr5	+	340	1	FSM	ENSMUSG00000072576.6	ENSMUST00000084281.3	210	1	-24	-106	-24	106	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGGTGGGAGAGATAGC	NA	NA	NA	NA	NA	NA	NA	NA	134492069	134492409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_134492100_134492400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020279	chr5	+	665	4	ISM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	11515	3557	11515	-3557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAGCCCTGGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	134623058	134627102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_134623129_134624136_134624218_134625735_134625850_134626702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020280	chr5	+	421	1	Genic_Genomic	ENSMUSG00000023104.10	novel	NA	NA	NA	NA	18699	4	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTTGTCTTCCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	134630242	134630663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_134630200_134630700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020281	chr5	-	970	1	Genic_Genomic	ENSMUSG00000040731.14	novel	NA	NA	NA	NA	18658	1	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCTCTAAAGAAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	134649543	134648573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_134648600_134649500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020282	chr5	-	1201	5	ISM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	11633	998	11633	-998	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCAGGGGAGTCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	134656568	134649728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020283	chr5	-	540	4	ISM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	14028	1683	13885	-1527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCGGAAACACAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	134654316	134650257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020284	chr5	-	446	5	ISM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	11714	2331	11571	-2175	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGCCCTGGGGACCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	134656630	134650905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020285	chr5	-	556	4	ISM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	-137	5527	6	-5527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTTGGATTCAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	134668338	134654257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_134654317_134654394_134654460_134656441_134656630_134668094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020286	chr5	+	1149	2	FSM	ENSMUSG00000072573.3	ENSMUST00000100641.3	1148	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTTTGTCTGGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	134705343	134709000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_134705654_134708161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020287	chr5	+	858	2	ISM	ENSMUSG00000040557.15	ENSMUST00000111218.8	1387	6	3386	-18	3386	18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAACAACACAGAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	134964631	134970074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_134964726_134969310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020288	chr5	+	1274	1	NIC	ENSMUSG00000040557.15	novel	2808	6	NA	NA	8060	2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAGAAAGTAAAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	134969305	134970579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_134969300_134970600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020289	chr5	+	312	2	ISM	ENSMUSG00000040532.15	ENST00000395147.9	599	4	0	931	0	-931	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTACACCTATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	135038833	135039914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135038972_135039740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020290	chr5	+	288	2	ISM	ENSMUSG00000040532.15	ENST00000458339.6	417	3	906	-8	906	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCAGCTTCTTGGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	135039739	135040853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135039915_135040740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020291	chr5	+	154	2	ISM	ENSMUSG00000040532.15	ENST00000395147.9	599	4	946	489	946	-489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCACTAACCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	135039779	135040356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135039915_135040337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020292	chr5	+	138	2	NNC	ENSMUSG00000040532.15	novel	417	3	NA	NA	1036	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGGATGCTGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	135039869	135040839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_135039915_135040746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020293	chr5	+	192	2	ISM	ENSMUSG00000040532.15	ENST00000395147.9	599	4	1599	0	1599	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCTGTCACCAGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135040432	135040845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135040520_135040740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020294	chr5	+	108	1	NIC	ENSMUSG00000040532.15	novel	972	6	NA	NA	1904	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCTGTCACCAGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135040737	135040845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_135040700_135040800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020295	chr5	+	1557	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	106	-2	106	2	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTGTGGTCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	135093161	135094718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_135093200_135094700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020296	chr5	-	954	1	ISM	ENSMUSG00000043614.14	ENSMUST00000067935.11	1544	4	4413	0	4413	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCCCCGCCTCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	135102707	135101753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_135101800_135102700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020297	chr5	+	199	3	ISM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	184	11394	184	-11394	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCTGTGCGGATGACC	NA	NA	NA	NA	NA	NA	NA	NA	135178694	135183220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135178719_135181788_135181911_135183167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020298	chr5	+	162	1	ISM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	15942	0	15942	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGCCGTCAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	135194452	135194614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135194500_135194600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020299	chr5	+	342	3	ISM	ENSMUSG00000029681.13	ENSMUST00000111188.5	1434	5	0	4624	0	3759	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTTGAATTCCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	135197265	135206061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135197453_135199940_135200017_135205982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020300	chr5	+	299	2	ISM	ENSMUSG00000029681.13	ENSMUST00000111187.10	564	3	2697	56	2674	-56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCAGCCAGTGCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	135199939	135202246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135200017_135202024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020301	chr5	+	253	1	Genic_Genomic	ENSMUSG00000029681.13	novel	NA	NA	NA	NA	4786	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTGTCTATTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	135202051	135202304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_135202100_135202300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020302	chr5	+	342	3	ISM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	8844	1268	8715	-1244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGGTAAGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	135205980	135209441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135206080_135208803_135208975_135209369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020303	chr5	+	253	2	ISM	ENSMUSG00000029681.13	ENSMUST00000111188.5	1434	5	12103	822	12103	-822	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGCAAGCACTAGGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	135209368	135209863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135209450_135209691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020304	chr5	+	200	1	Genic_Genomic	ENSMUSG00000029681.13	novel	NA	NA	NA	NA	13245	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACAGCTTCTTTCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	135210510	135210710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_135210500_135210700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020305	chr5	+	1905	2	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	23475	27835	23475	-27835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAATTTGTCCTGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	135239592	135247148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135239793_135245443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020306	chr5	+	1850	3	ISM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	29459	22906	29459	-22906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTGCTGCAGAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135245576	135252077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135247149_135250811_135250951_135251938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020307	chr5	-	2291	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	3	-1	3	1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTTCTATCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	135280081	135277790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_135277800_135280100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020308	chr5	+	251	2	ISM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	1543	2705	1543	-2705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGAGATGGGAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	135400349	135402947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135400461_135402807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020309	chr5	+	258	3	ISM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	4083	1787	4083	-1787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGAAGGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	135402889	135403865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135402947_135403037_135403154_135403780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020310	chr5	+	233	2	ISM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	5120	1324	5120	-1324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACATTCAGGTAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	135403926	135404328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135403960_135404128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020311	chr5	+	273	2	ISM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	5404	1100	5404	-1100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGGAGCTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	135404210	135404552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135404340_135404408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020312	chr5	+	254	2	ISM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	5614	801	5614	-801	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCCAGCAGAACCATGC	NA	NA	NA	NA	NA	NA	NA	NA	135404420	135404851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135404553_135404729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020313	chr5	+	194	1	Genic_Genomic	ENSMUSG00000000916.16	novel	NA	NA	NA	NA	6659	7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAATATTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	135405465	135405659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_135405500_135405700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020314	chr5	+	4208	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCTCAGTGAATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	135661470	135675230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020315	chr5	+	633	4	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	44736	641	44614	-641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACATCTATGTCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	135762625	135763539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135762777_135762880_135763152_135763236_135763383_135763474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020316	chr5	+	936	4	ISM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	45072	0	44950	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	135762961	135764180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135763152_135763236_135763383_135763474_135763561_135763666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020317	chr5	+	515	1	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	45654	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	135763665	135764180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_135763700_135764200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020318	chr5	+	1137	8	ISM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	5	613	5	-431	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTATCCAGGGCGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	135807338	135818632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020319	chr5	+	329	3	ISM	ENSMUSG00000019179.11	ENST00000443006.5	920	8	6	4167	6	-4167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCAGGGGCAGGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	135807524	135814896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135807656_135813037_135813122_135814782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020320	chr5	+	960	7	ISM	ENSMUSG00000019179.11	ENST00000443006.5	920	8	5525	-183	5525	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTAGATTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135813043	135819246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020321	chr5	+	137	1	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	11410	2	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCCTCGAGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	135818928	135819065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_135818900_135819100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020322	chr5	+	711	3	NNC	ENSMUSG00000004951.11	novel	719	3	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCAAGCTACTGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	135916909	135918394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_135917289_135917902_135917946_135918105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020323	chr5	+	720	3	FSM	ENSMUSG00000004951.11	ENST00000675134.1	719	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCAAGCTACTGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	135916911	135918394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_135917289_135917902_135917946_135918094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020324	chr5	+	749	3	FSM	ENSMUSG00000004951.11	ENST00000674638.1	735	3	0	-14	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCACCGTCTGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	135916911	135918407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_135917289_135917907_135917967_135918094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020325	chr5	+	715	3	FSM	ENSMUSG00000004951.11	ENST00000674547.1	774	3	60	-1	60	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCAAGCTACTGCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	135916971	135918394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_135917289_135917902_135918001_135918094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020326	chr5	+	617	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	248	38	109	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTCAAATAAAAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	135917020	135918379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_135917289_135917902_135917967_135918094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020327	chr5	-	345	2	Antisense	novelGene_ENSMUSG00000004951.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTCATCGGGCAACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	135918001	135917041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_135917286_135917900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020328	chr5	+	328	1	Genic_Genomic	ENSMUSG00000004951.11	novel	NA	NA	NA	NA	1180	2	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCCAGAGTTATTATG	NA	NA	NA	NA	NA	NA	NA	NA	135918091	135918419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_135918100_135918400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020329	chr5	-	979	1	NIC	ENSMUSG00000051391.10	novel	1610	3	NA	NA	25167	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	135938241	135937262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_135937300_135938200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020330	chr5	-	1163	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	56	2301	11	-2301	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCTAGACGGTAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	135963397	135939563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_135940506_135963176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020331	chr5	-	740	1	ISM	ENSMUSG00000029699.14	ENSMUST00000111153.8	2745	11	13568	13	1308	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTTAACTGAGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	135989817	135989077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_135989100_135989800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020332	chr5	+	349	2	ISM	ENSMUSG00000004947.16	ENST00000413936.6	2062	10	15241	20404	15209	-20404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATGACGGATCCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	136038939	136040942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_136039211_136040864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020333	chr5	+	357	2	ISM	ENSMUSG00000004947.16	ENST00000413936.6	2062	10	17482	10702	17450	-10702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGCGCCCCCACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	136041180	136050644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_136041502_136050608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020334	chr5	+	324	3	ISM	ENSMUSG00000004947.16	ENST00000413936.6	2062	10	34307	1216	34275	-1216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCCCTACCCCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	136058005	136060130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_136058077_136059333_136059496_136060039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020335	chr5	+	327	1	ISM	ENSMUSG00000004947.16	ENSMUST00000111142.9	2650	11	37746	0	37669	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGGGAAGTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	136061399	136061726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_136061400_136061700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020336	chr5	+	519	5	FSM	ENSMUSG00000004952.14	ENST00000454572.1	517	5	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTGAGGAGCCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	136120045	136129868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_136120162_136120601_136120664_136125514_136125647_136127541_136127638_136129755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020337	chr5	+	646	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	136145484	136151801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020338	chr5	-	461	1	ISM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	22794	0	22709	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCTCTTGAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	136176773	136176312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136176300_136176800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020339	chr5	-	3071	1	Genic_Genomic	ENSMUSG00000039737.12	novel	NA	NA	NA	NA	17767	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTTGGTTAGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	136210050	136206979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_136207000_136210000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020340	chr5	-	282	2	ISM	ENSMUSG00000005057.14	ENSMUST00000196397.5	2797	9	25047	890	25030	-888	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCGCTGGAGCTTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	136248661	136247890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136248007_136248495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020341	chr5	-	481	1	ISM	ENSMUSG00000029705.18	ENSMUST00000004097.16	12862	24	292174	8376	290138	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGCCGGGCCTCCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	136304125	136303644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136303600_136304100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020342	chr5	-	924	3	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	282352	207	282352	-207	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTTCTGCGTTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	136311911	136303851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136304321_136308283_136308549_136311721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020343	chr5	-	744	3	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	278344	4654	278344	-4654	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCATAATTACAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	136315919	136308298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136308549_136311721_136311911_136315614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020344	chr5	-	501	3	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	260628	8127	260628	-8127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAACAATGTGGAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	136333635	136311771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136311911_136315614_136315918_136333576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020345	chr5	-	1201	4	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	256976	11970	256976	-11970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCCCCATTGCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	136337287	136315614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136315918_136333576_136333634_136334302_136334469_136336612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020346	chr5	-	940	2	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	252400	33231	252400	-33231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAAGCGCTGAGTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	136341863	136336875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136337449_136341496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020347	chr5	-	506	3	ISM	ENSMUSG00000029705.18	ENST00000556210.1	4080	22	249365	37855	249365	-37855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGAGACATGTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	136344898	136341499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_136341863_136343160_136343258_136344852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020348	chr5	+	744	2	ISM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	3606	1972	3554	1310	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGCCTGACAACCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	136940609	136942286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_136940746_136941678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020349	chr5	+	725	1	ISM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	6530	0	6478	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCTCGTCTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	136943533	136944258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_136943500_136944300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020350	chr5	+	902	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	48	-2	48	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	136982176	136995088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020351	chr5	+	786	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTGTGAGCGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	136990931	136995089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020352	chr5	+	771	3	ISM	ENSMUSG00000001739.15	ENST00000401528.5	969	5	0	2241	0	-2241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGGGGACAGAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	136996465	137001339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_136996591_136996697_136997178_137001173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020353	chr5	+	1890	5	FSM	ENSMUSG00000001739.15	ENSMUST00000001790.6	1850	5	-26	-14	-26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGCTGTCATGGG	NA	NA	NA	NA	NA	NA	NA	NA	136996696	137004712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_136997178_137001173_137001339_137003294_137003377_137003463_137003581_137003667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020354	chr5	+	684	3	NNC	ENSMUSG00000001739.15	novel	969	5	NA	NA	-25	-243	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACTGACTTCTTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	136996697	137003337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_136997185_137001184_137001339_137003294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020355	chr5	-	227	1	ISM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	5631	0	4511	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGTCAGGGTTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	137011244	137011017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137011000_137011200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020356	chr5	-	332	2	ISM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	4210	70	4210	36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGACTGTTGTGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	137011545	137011113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137011272_137011371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020357	chr5	-	255	2	ISM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	3951	326	3951	-195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGAGCCTGACCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	137011804	137011369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137011542_137011721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020358	chr5	-	252	2	ISM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	1851	678	1851	-547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGAAGGCTCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	137013904	137011721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137011802_137013732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020359	chr5	-	226	2	ISM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	37	2688	37	-2557	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGGGGGTTAGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	137015718	137013731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137013904_137015664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020360	chr5	-	141	2	ISM	ENSMUSG00000059518.15	ENSMUST00000111090.9	698	4	-12	2680	-12	-2655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCATTGGAGAATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	137016409	137013829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137013904_137016342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020361	chr5	-	534	1	Genic_Genomic	ENSMUSG00000004849.15	novel	NA	NA	NA	NA	10610	1	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTTGGCTTTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	137064379	137063845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_137063800_137064400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020362	chr5	-	922	4	ISM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	2888	308	2888	-308	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAACCAGCCAGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	137072101	137064154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020363	chr5	-	555	4	ISM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	0	2424	0	-2424	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAGCCCGGGACAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	137074989	137066270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137066410_137070622_137070732_137071917_137072097_137074861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020364	chr5	-	486	4	ISM	ENSMUSG00000094840.6	ENSMUST00000179412.2	1881	7	252	1701	252	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCGACAGGTACGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	137246600	137244970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137245053_137245134_137245315_137245828_137245992_137246539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020365	chr5	-	439	4	NNC	ENSMUSG00000094840.6	novel	1439	8	NA	NA	799	-1872	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCTTAAGGCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	137250736	137246843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_137246992_137248719_137248779_137248885_137248996_137250614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020366	chr5	-	811	4	ISM	ENSMUSG00000094840.6	ENST00000379458.9	1619	9	173	3744	173	-3744	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCCTTCAGGGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	137251362	137248715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137248779_137248885_137249002_137250614_137250804_137250919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020367	chr5	-	879	4	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	2473	0	2259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGCTGGTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	137310193	137307915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020368	chr5	-	882	5	ISM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	1313	699	1099	-699	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGGAGGAGACGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	137311353	137308614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020369	chr5	-	508	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	9770	0	9770	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTGGTGAGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	137321171	137319663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137319803_137320657_137320833_137320977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020370	chr5	-	421	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	9505	1069	9505	-1069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTTCGCCTGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	137321436	137320732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137320833_137320977_137321171_137321308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020371	chr5	-	395	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	7273	1321	7273	-1321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCAGGTTGGGGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	137323668	137320984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137321171_137321308_137321434_137323584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020372	chr5	-	368	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	7003	1645	7003	-1645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGGAATAAAGATACATT	NA	NA	NA	NA	NA	NA	NA	NA	137323938	137321308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137321434_137323584_137323668_137323778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020373	chr5	-	380	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	4974	4114	4974	-4114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGCCCTCTGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	137325967	137323777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137323937_137325632_137325745_137325858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020374	chr5	-	528	3	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	3935	5969	3935	-5969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGTGGTGGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	137327006	137325632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137325745_137325858_137325967_137326698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020375	chr5	-	512	2	ISM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	21	7035	21	-7035	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTGAACACCATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	137330920	137326698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137327008_137330717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020376	chr5	+	950	3	ISM	ENSMUSG00000029710.16	ENSMUST00000166239.8	3741	18	21757	36	21674	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGATATGTTCTAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	137370448	137372536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_137370480_137370646_137370803_137371773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020377	chr5	+	868	1	ISM	ENSMUSG00000029710.16	ENST00000616502.4	3695	14	23521	0	23152	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGAGCTGGGGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	137371926	137372794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_137371900_137372800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020378	chr5	+	187	1	FSM	ENSMUSG00000106476.2	ENSMUST00000196458.2	277	1	143	-53	143	53	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGATCAAAATGTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	137431391	137431578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_137431400_137431600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020379	chr5	-	881	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	1	-1	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTCGAATGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	137500779	137499699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_137500342_137500540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020380	chr5	-	857	1	FSM	ENSMUSG00000029715.6	ENSMUST00000111035.2	988	1	131	0	131	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTCGAATGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	137500556	137499699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_137499700_137500600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020381	chr5	-	822	2	NNC	ENSMUSG00000029715.6	novel	881	2	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	137500728	137499700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_137500335_137500540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020382	chr5	-	351	1	ISM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	5033	0	2820	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTCCTTGCTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	137526739	137526388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137526400_137526700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020383	chr5	-	899	3	ISM	ENSMUSG00000029713.16	ENSMUST00000150063.9	1569	9	2091	-372	2091	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTAGTCTCCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	137527468	137526392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137526872_137526952_137527170_137527265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020384	chr5	-	333	3	ISM	ENSMUSG00000029713.16	ENSMUST00000150063.9	1569	9	1787	342	1787	-342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGGCTGATCAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	137527772	137527106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137527170_137527265_137527468_137527704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020385	chr5	-	381	3	ISM	ENSMUSG00000029713.16	ENSMUST00000150063.9	1569	9	1530	554	1530	-554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGCCGACAGACATTC	NA	NA	NA	NA	NA	NA	NA	NA	137528029	137527318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137527468_137527704_137527772_137527864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020386	chr5	-	306	3	ISM	ENSMUSG00000029713.16	ENSMUST00000150063.9	1569	9	444	1680	444	-1680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTGGGTGGCCCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	137529115	137528444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137528553_137528659_137528699_137528956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020387	chr5	-	478	2	ISM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	41	2567	41	-2191	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGCCTGGTGGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	137531731	137528955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137529103_137531400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020388	chr5	-	755	4	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	4263	-9	4263	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1833	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGAGGTTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	137605375	137603360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020389	chr5	-	459	3	NNC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	5574	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTGTCTGAGGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	137604064	137603364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_137603573_137603718_137603890_137603984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020390	chr5	-	429	3	NNC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	5608	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTGTCTGAGGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	137604030	137603364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_137603577_137603718_137603890_137603984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020391	chr5	-	218	1	NIC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	6056	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTGTCTGAGGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	137603582	137603364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_137603400_137603600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020392	chr5	-	339	2	NNC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	4279	-608	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTCTCTCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	137605359	137603984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_137604053_137605088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020393	chr5	-	327	2	NNC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	4291	-608	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTCTCTCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	137605347	137603984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_137604063_137605098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020394	chr5	-	497	3	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	3819	627	3819	-620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTAGCCTAGGTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	137605819	137603996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137604063_137605088_137605370_137605669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020395	chr5	+	424	2	Antisense	novelGene_ENSMUSG00000029718.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCATTAGGCTACGTAG	NA	NA	NA	NA	NA	NA	NA	NA	137605088	137605811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_+_137605375_137605673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020396	chr5	-	364	2	NNC	ENSMUSG00000029718.15	novel	1626	9	NA	NA	3837	-1765	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGACACCAGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	137605801	137605141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_137605370_137605665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020397	chr5	-	735	4	ISM	ENSMUSG00000029718.15	ENST00000223061.6	1451	9	2252	1786	2220	-1786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAACCTAAATCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	137607418	137605162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137605370_137605669_137605807_137606216_137606342_137607152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020398	chr5	-	513	3	ISM	ENSMUSG00000029718.15	ENST00000223061.6	1451	9	894	2829	862	-2829	internal_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTAGGCTGCCCACTA	NA	NA	NA	NA	NA	NA	NA	NA	137608776	137606205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137606342_137607152_137607412_137608658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020399	chr5	+	323	2	Antisense	novelGene_ENSMUSG00000029718.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGAATGGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	137606272	137607414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_+_137606337_137607155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020400	chr5	-	605	3	ISM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	-1	3803	-1	-3791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCGGGCACTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	137609750	137607167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137607412_137608658_137608768_137609498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020401	chr5	-	336	2	ISM	ENSMUSG00000029718.15	ENST00000223061.6	1451	9	-43	5270	36	-5270	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTCCCCATTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	137609713	137608646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_137608768_137609498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020402	chr5	+	473	1	FSM	ENSMUSG00000081228.2	ENSMUST00000117679.2	336	1	9	-146	9	146	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGTGACCTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	137613897	137614370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_137613900_137614400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020403	chr5	+	371	2	ISM	ENSMUSG00000093445.8	ENSMUST00000176667.8	2209	18	16	7390	16	-6471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGGTAGTGGGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	137627455	137631971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_137627689_137631833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020404	chr5	+	600	2	ISM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	126	14254	126	-12278	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCACCACGGACTATGA	NA	NA	NA	NA	NA	NA	NA	NA	137744383	137745416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_137744677_137745109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020405	chr5	+	355	1	Genic_Genomic	ENSMUSG00000029723.17	novel	NA	NA	NA	NA	-643	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGAGCCATCTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	137759317	137759672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_137759300_137759700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020406	chr5	+	696	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	4	347	4	-347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAAGGGATGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137777169	137778025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_137777484_137777563_137777808_137777887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020407	chr5	+	617	3	ISM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	419	0	419	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137777584	137778372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_137777808_137777887_137778025_137778115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020408	chr5	+	254	2	FSM	ENSMUSG00000037053.7	ENST00000454506.2	321	2	2	65	2	-65	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGGCCAGGGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	137979822	137983577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_137979887_137983387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020409	chr5	+	234	1	ISM	ENSMUSG00000037053.7	ENSMUST00000035390.7	1297	4	3608	4853	3588	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGGTCAGTGATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	137983408	137983642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_137983400_137983600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020410	chr5	+	565	2	ISM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	8	8786	8	-8734	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCAGCTTCGGGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	138115206	138123741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138115270_138123239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020411	chr5	+	547	1	ISM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	16803	0	16678	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATTTTATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	138131980	138132527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138132000_138132500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020412	chr5	-	2198	1	ISM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	13845	0	3413	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGGACTTGGGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	138140161	138137963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138138000_138140200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020413	chr5	-	609	1	ISM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	10552	4882	120	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATAGGACCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	138143454	138142845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138142800_138143500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020414	chr5	-	370	2	NNC	ENSMUSG00000037007.18	novel	365	2	NA	NA	0	2	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTTACCTACAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	138143574	138143122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_138143365_138143446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020415	chr5	-	375	2	FSM	ENSMUSG00000037007.18	ENST00000250076.7	365	2	-8	-2	-8	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTTACCTACAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	138143582	138143122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_138143365_138143449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020416	chr5	+	361	2	Antisense	novelGene_ENSMUSG00000037007.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGTGTGGATTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	138143123	138143572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_+_138143353_138143440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020417	chr5	-	359	2	NNC	ENSMUSG00000037007.18	novel	365	2	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTACCTACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138143573	138143123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_138143359_138143449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020418	chr5	-	364	2	NNC	ENSMUSG00000037007.18	novel	365	2	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTACCTACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138143575	138143123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_138143359_138143446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020419	chr5	-	818	3	ISM	ENSMUSG00000037007.18	ENSMUST00000165640.8	1320	4	1600	450	1600	-254	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAACCTTTAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	138149561	138143378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138143975_138148868_138148996_138149466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020420	chr5	-	289	2	ISM	ENSMUSG00000037007.18	ENSMUST00000132318.2	488	4	4407	0	1602	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGGAAGGCAGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	138149559	138149188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138149385_138149466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020421	chr5	+	449	4	ISM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	9	2419	9	-1751	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGCTCAAATATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	138159341	138160489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020422	chr5	+	375	4	NNC	ENSMUSG00000019494.15	novel	1787	10	NA	NA	298	-1601	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGATGTGAGTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	138159659	138160639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_138159760_138159935_138160066_138160398_138160488_138160583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020423	chr5	+	359	4	ISM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	323	1594	323	-1594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTGTTGACCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	138159684	138160646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138159760_138159935_138160068_138160398_138160488_138160583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020424	chr5	+	449	5	ISM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	572	734	572	-734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGAGGGGAATTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	138159933	138161506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020425	chr5	+	656	4	ISM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	2028	-102	2028	102	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCACCTTTTAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	138161389	138162342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138161507_138161588_138161682_138161770_138161872_138161997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020426	chr5	+	404	1	Genic_Genomic	ENSMUSG00000019494.15	novel	NA	NA	NA	NA	3146	3	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTTTTCTTGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	138162507	138162911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_138162500_138162900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020427	chr5	-	708	4	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	4475	-26	4475	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGAGTTTTTAGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	138165034	138162843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020428	chr5	-	281	1	ISM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	7535	24	6360	1	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCTCTTGCTTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	138163149	138162868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138162900_138163100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020429	chr5	-	648	3	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	3808	1301	3808	-1301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTGGGTCCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	138165701	138164170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138164341_138164944_138165029_138165307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020430	chr5	-	700	4	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	3269	2075	3269	-2075	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGGGGTGGAGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	138166240	138164944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138165029_138165307_138165702_138165812_138165897_138166102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020431	chr5	-	730	4	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	3072	2436	3072	-2436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGTAGATGACACCC	NA	NA	NA	NA	NA	NA	NA	NA	138166437	138165305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138165702_138165812_138165897_138166102_138166235_138166319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020432	chr5	-	265	2	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	2765	3450	2765	-3450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGGACCACGAGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	138166744	138166319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138166435_138166594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020433	chr5	-	760	5	ISM	ENSMUSG00000029730.17	ENSMUST00000148879.8	1351	9	2094	3732	1523	-3724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGCGTTTTGAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	138167986	138166593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020434	chr5	-	264	2	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	1947	4279	1947	-4279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGGGGGCGGCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	138167562	138167148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138167210_138167359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020435	chr5	-	1138	5	ISM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	44	4581	44	-4556	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGCCCAGGATGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	138170640	138167425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020436	chr5	-	326	2	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	1589	4639	1589	-4639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCGAGTGATCCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	138167920	138167508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138167736_138167821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020437	chr5	-	288	2	ISM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	325	5707	325	-5707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCAGGATTGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	138169184	138168576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138168659_138168978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020438	chr5	-	637	1	ISM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	60	7143	60	-7118	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGATCTATAGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	138170624	138169987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138170000_138170600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020439	chr5	-	901	3	ISM	ENSMUSG00000036980.14	ENST00000344095.8	2676	15	7254	-2	7251	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGAGCCTCCCGCATC	NA	NA	NA	NA	NA	NA	NA	NA	138178216	138176881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138177410_138177674_138177873_138178041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020440	chr5	+	780	1	ISM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	7648	0	7648	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGTGCATTCCTATA	NA	NA	NA	NA	NA	NA	NA	NA	138177911	138178691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138177900_138178700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020441	chr5	+	435	3	ISM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	29	3325	29	-3325	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTCCAGGAAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	138185775	138188855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138185983_138188531_138188659_138188754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020442	chr5	+	255	3	ISM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	2877	1958	2877	-1958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGATGAGACAGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	138188623	138190222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138188659_138188754_138188852_138190099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020443	chr5	+	466	3	ISM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	4350	932	4350	-932	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTTCTTGGTATGATC	NA	NA	NA	NA	NA	NA	NA	NA	138190096	138191248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138190223_138190822_138190941_138191026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020444	chr5	+	236	1	Genic_Genomic	ENSMUSG00000036968.16	novel	NA	NA	NA	NA	6199	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGTGTAATACATAATAT	NA	NA	NA	NA	NA	NA	NA	NA	138191945	138192181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_138191900_138192200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020445	chr5	+	361	3	ISM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	177	606	177	-350	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGGGTTTCTTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	138253920	138257051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138254066_138254514_138254596_138256916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020446	chr5	+	152	2	NNC	ENSMUSG00000050552.9	novel	317	3	NA	NA	36	-370	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGCTCCTGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	138254549	138257031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_138254587_138256916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020447	chr5	+	267	3	FSM	ENSMUSG00000050552.9	ENST00000460732.5	317	3	57	-7	57	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCACGGGCTGGAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	138254570	138257408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_138254596_138256916_138257052_138257301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020448	chr5	+	201	2	ISM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	3172	274	2402	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTGATGTCTGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	138256915	138257383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138257035_138257301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020449	chr5	+	110	1	NIC	ENSMUSG00000050552.9	novel	877	4	NA	NA	2787	9	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGGCTGGAGAAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	138257300	138257410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_138257300_138257400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020450	chr5	+	137	1	Genic_Genomic	ENSMUSG00000050552.9	novel	NA	NA	NA	NA	3008	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGCACAGAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	138257521	138257658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_138257500_138257700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020451	chr5	+	578	2	ISM	ENSMUSG00000085227.2	ENSMUST00000124298.2	743	3	1820	0	1794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGACACAAGTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	138264124	138264923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138264268_138264488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020452	chr5	+	458	5	ISM	ENSMUSG00000036928.15	ENST00000456374.2	697	7	24	519	24	-519	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACTTTCATTTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	138294985	138296609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020453	chr5	+	474	5	ISM	ENSMUSG00000036928.15	ENST00000456374.2	697	7	921	0	921	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGAGGGTCACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	138295882	138297128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138295965_138296227_138296336_138296540_138296656_138296778_138296889_138297069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020454	chr5	-	394	1	Genic_Genomic	ENSMUSG00000058291.15	novel	NA	NA	NA	NA	15697	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCATTTTAATTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	138602305	138601911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_138601900_138602300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020455	chr5	-	528	1	ISM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	13118	2464	13097	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATCTTTGTTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	138604905	138604377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138604400_138604900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020456	chr5	-	370	2	ISM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	7826	1423	7826	-1423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTCACACACCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	138610176	138605804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138606084_138610085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020457	chr5	+	1592	2	ISM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	299	52098	299	-52098	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTAGCCACCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	138740567	138743734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_138741981_138743555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020458	chr5	-	1351	2	ISM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	15756	-1	15672	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGATGCATCCCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	138965036	138961767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_138962983_138964900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020459	chr5	-	1803	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	258	-1	174	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGATGCATCCCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	138980534	138961767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020460	chr5	+	695	2	ISM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	105	34841	99	-34359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGAGTTTTCTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	139136082	139137424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_139136591_139137237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020461	chr5	+	753	2	ISM	ENSMUSG00000025857.11	ENSMUST00000196441.2	2426	13	34298	-41	34298	41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGGGTTTTGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	139170281	139171824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_139170475_139171264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020462	chr5	+	664	1	ISM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	35624	0	35618	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCCATCTGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	139171601	139172265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_139171600_139172300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020463	chr5	+	2105	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139238080	139255806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020464	chr5	-	333	3	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	51657	0	51657	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAAGAAAGCCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	139259568	139258806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139258832_139259089_139259319_139259489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020465	chr5	-	592	5	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	45815	283	45815	-283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGGGCAGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	139265410	139259089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139259319_139259489_139259562_139260201_139260265_139260483_139260565_139265263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020466	chr5	-	400	4	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	44650	1402	44650	-1402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGGTAGGGGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	139266575	139260208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139260265_139260483_139260565_139265263_139265411_139266459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020467	chr5	-	324	3	ISM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	44825	2853	44673	-1677	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCTGTCCCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	139266552	139260483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139260568_139265263_139265411_139266459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020468	chr5	-	437	4	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	23073	6457	23073	-6457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTGGATGGACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	139288152	139265263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139265411_139266459_139266573_139278890_139278974_139288058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020469	chr5	-	421	4	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	17597	7652	17597	-7652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCCCGCCATGGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	139293628	139266458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139266573_139278890_139278974_139288058_139288151_139293496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020470	chr5	-	497	4	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	0	20083	0	-20083	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGTGCCCTCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	139311225	139278889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139278974_139288058_139288151_139293496_139293628_139311035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020471	chr5	-	1527	1	Genic_Genomic	ENSMUSG00000045438.13	novel	NA	NA	NA	NA	7519	1	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCGTTGAGTAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	139323469	139321942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_139321900_139323500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020472	chr5	-	1750	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	16	695	16	-695	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCCCCTCGGGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	139330972	139322638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_139324131_139328317_139328430_139330826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020473	chr5	-	515	1	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	100249	0	100249	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGACTTTTTGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	139346008	139345493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139345500_139346000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020474	chr5	-	743	3	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	96338	523	96338	-523	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	139349919	139346016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139346486_139347061_139347144_139349727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020475	chr5	+	1157	2	FSM	ENSMUSG00000044197.9	ENST00000444847.2	1514	2	1	356	1	-356	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACGAGGAACACTAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	139366390	139379221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_139366503_139378176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020476	chr5	+	1082	1	ISM	ENSMUSG00000044197.9	ENSMUST00000051293.8	4157	2	12164	2589	2960	4	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACATGATACTTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	139378499	139379581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_139378500_139379600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020477	chr5	+	1430	3	FSM	ENSMUSG00000053647.5	ENSMUST00000066211.5	2537	3	110	997	110	-997	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCCTTGACAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	139409015	139412558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_139409110_139409415_139409628_139411434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020478	chr5	+	1172	1	ISM	ENSMUSG00000053647.5	ENSMUST00000066211.5	2537	3	3478	0	3478	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTGGTCATTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	139412383	139413555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_139412400_139413600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020479	chr5	+	2848	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCTGGATGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	139777268	139788408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_139777468_139784893_139784974_139785839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020480	chr5	-	879	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGACATCATGGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	139812635	139809345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_139809829_139811882_139812120_139812476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020481	chr5	-	643	4	ISM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	205130	0	205130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATCTAGCCTCTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	140091363	139994879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020482	chr5	-	1779	1	FSM	ENSMUSG00000105453.2	ENSMUST00000198772.2	2546	1	767	0	767	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGACTCTGGGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	140017164	140015385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_140015400_140017200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020483	chr5	-	755	1	ISM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	3470	0	3470	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTACTTGTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	140314183	140313428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_140313400_140314200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020484	chr5	-	849	2	ISM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	711	466	711	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCATCCGGGACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	140316942	140313894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_140314536_140316734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020485	chr5	+	857	3	ISM	ENSMUSG00000036639.13	ENSMUST00000110826.8	606	4	2059	-329	2030	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	140320208	140323892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140320375_140321067_140321214_140323347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020486	chr5	+	578	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	232	16806	232	-16806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGTTGGAGTCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	140405314	140412309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140405582_140411016_140411210_140412191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020487	chr5	+	292	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	5996	16537	5996	-16537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTCAAAGACCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	140411078	140412578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140411210_140412191_140412312_140412537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020488	chr5	+	305	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	7108	16218	7108	-16218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGTGTACCAGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	140412190	140412897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140412312_140412537_140412596_140412771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020489	chr5	+	417	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	7688	13180	7688	-13180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGAGTAGACGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	140412770	140415935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140412901_140413164_140413323_140415806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020490	chr5	+	313	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	8126	13032	8126	-13032	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCTGGTTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	140413208	140416083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140413323_140415806_140415939_140416016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020491	chr5	+	248	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	10722	12343	10722	-12343	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGAATGTTTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	140415804	140416772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140415939_140416016_140416084_140416725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020492	chr5	+	302	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	10953	10230	10953	-10230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTTAGTGCTTGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	140416035	140418885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140416084_140416725_140416773_140418678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020493	chr5	+	309	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	13596	6051	13596	-6051	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAATGGCAGTAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	140418678	140423064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140418890_140422002_140422076_140423039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020494	chr5	+	326	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	17955	3326	17955	-3326	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGTGGAGCCACAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	140423037	140425789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140423163_140424070_140424150_140425667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020495	chr5	+	298	3	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	20614	1562	20614	-1562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAAGCTTCAAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	140425696	140427553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140425807_140426740_140426867_140427491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020496	chr5	+	379	2	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	22990	227	22990	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCATGGGGTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	140428072	140428888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140428192_140428628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020497	chr5	+	285	1	ISM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	23748	0	23748	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	140428830	140429115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_140428800_140429100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020498	chr5	+	1490	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	1	840	1	-840	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGCCCTCACGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	140491305	140510639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_140491452_140509295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020499	chr5	+	1386	1	Genic_Genomic	ENSMUSG00000036599.11	novel	NA	NA	NA	NA	18796	7	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATATGTACGGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	140510100	140511486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_140510100_140511500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020500	chr5	-	2469	3	ISM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	31811	1500	22963	-1500	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGGGAACTGGAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	140656322	140649081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_140651249_140651762_140651964_140656221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020501	chr5	-	276	3	ISM	ENSMUSG00000036555.15	ENST00000438376.6	881	9	7434	-4	7434	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAGGTCTAATGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	140671851	140668152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_140668213_140669130_140669295_140671799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020502	chr5	-	716	7	ISM	ENSMUSG00000036555.15	ENST00000438376.6	881	9	597	972	597	-972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTGTGGGCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	140678688	140669128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675679_140675825_140677354_140677426_140678548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020503	chr5	-	336	3	ISM	ENSMUSG00000036555.15	ENST00000325979.11	901	9	6	9198	6	-9198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCACTCTGCTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	140679299	140677354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_140677426_140678548_140678684_140679169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020504	chr5	+	880	4	FSM	ENSMUSG00000050022.17	ENST00000407112.1	875	4	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCGGGGAAGCCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	140726938	140735088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_140727343_140729771_140729940_140733897_140734027_140734909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020505	chr5	+	450	1	Genic_Genomic	ENSMUSG00000029578.16	novel	NA	NA	NA	NA	40547	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGGGGACTGTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	142655894	142656344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_142655900_142656300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020506	chr5	-	416	3	FSM	ENSMUSG00000039477.17	ENST00000399434.2	412	3	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGGACTGTTGTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	142804985	142775802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_142775945_142778759_142778916_142804867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020507	chr5	-	1926	6	NIC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCTCTGTGGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	142892509	142888867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_142889697_142889821_142890004_142890098_142890538_142890987_142891232_142891318_142891448_142892406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020508	chr5	-	1925	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCTCTGTGGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	142892512	142888867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020509	chr5	-	1906	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTCTGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	142892503	142888869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_142889697_142889821_142890004_142890098_142890526_142890987_142891232_142891318_142891448_142892406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020510	chr5	-	1897	6	NNC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTCTGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	142892503	142888869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_142889697_142889821_142890004_142890098_142890538_142891008_142891232_142891318_142891448_142892406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020511	chr5	-	1132	4	ISM	ENSMUSG00000029580.15	ENSMUST00000167721.8	1242	5	1069	0	53	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTGTCTTTTTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	142891388	142889255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_142889697_142889821_142890004_142890098_142890538_142891318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020512	chr5	-	1104	3	ISM	ENSMUSG00000029580.15	ENST00000441772.1	1223	4	207	-1	0	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGTTACTGAGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	142891234	142889551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_142889697_142889821_142890538_142890991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020513	chr5	-	1049	3	NIC	ENSMUSG00000029580.15	novel	1012	4	NA	NA	33	-25	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGCACCGCAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	142891201	142889577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_142889697_142889821_142890538_142890987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020514	chr5	-	689	2	ISM	ENSMUSG00000029580.15	ENST00000432588.6	1205	4	1058	-1	849	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTACGATGAGTCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	142890385	142889601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_142890004_142890098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020515	chr5	-	409	1	NIC	ENSMUSG00000029580.15	novel	1920	6	NA	NA	1224	1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTACGATGAGTCCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	142890010	142889601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_142889600_142890000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020516	chr5	-	1077	3	ISM	ENSMUSG00000029580.15	ENST00000441772.1	1223	4	2	269	2	-219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTAAGCATCCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	142891439	142889821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_142890538_142890991_142891232_142891318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020517	chr5	+	2673	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTGTGTCTCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	142946099	142958940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020518	chr5	+	1293	1	Genic_Genomic	ENSMUSG00000029581.15	novel	NA	NA	NA	NA	11518	1	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTGTGTCTCAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	142957648	142958941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_142957600_142958900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020519	chr5	-	646	1	ISM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	121456	0	106907	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	142977293	142976647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_142976600_142977300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020520	chr5	-	417	4	NNC	ENSMUSG00000045078.13	novel	412	4	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTGGAGGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	143084203	143066706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_143066833_143071625_143071740_143073269_143073377_143084133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020521	chr5	-	457	4	NNC	ENSMUSG00000045078.13	novel	450	4	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGGAAGCTGAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	143084202	143066716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_143066833_143071625_143071791_143073269_143073377_143084133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020522	chr5	-	720	3	ISM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	22301	95719	7766	-6576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCAGGATGACGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	143076434	143073293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143073377_143075497_143075575_143075874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020523	chr5	-	929	4	ISM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	16	99275	2	-9205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTGAGGTAGATCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	143098733	143075922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143076514_143078749_143078881_143084133_143084261_143098653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020524	chr5	-	639	1	Genic_Genomic	ENSMUSG00000039244.11	novel	NA	NA	NA	NA	13517	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATTGTGGGGTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	143287598	143286959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_143287000_143287600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020525	chr5	-	1156	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	7217	209	7217	-209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCACCAACAGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143293898	143287170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143287759_143292520_143292561_143293370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020526	chr5	-	632	2	NNC	ENSMUSG00000039244.11	novel	2208	6	NA	NA	7670	-268	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGGTAAGCCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	143293445	143287229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_143287759_143293342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020527	chr5	-	890	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	980	6413	980	-6413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAAGTGCTGACCCCG	NA	NA	NA	NA	NA	NA	NA	NA	143300135	143293374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143293896_143297465_143297632_143299932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020528	chr5	-	691	3	ISM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	33	10626	33	-10626	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGACTACTGCTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	143301082	143297587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143297632_143299932_143300155_143300657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020529	chr5	-	897	4	ISM	ENSMUSG00000001844.11	ENSMUST00000161915.8	1216	6	2043	-10	2043	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCTCATCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	143310066	143302241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020530	chr5	+	573	2	ISM	ENSMUSG00000089889.3	ENSMUST00000162890.2	600	3	1377	0	1377	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCGAAGGCCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	143316458	143318456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143316641_143318065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020531	chr5	+	1832	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGTCTTTTCTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	143389592	143407659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020532	chr5	+	1806	5	NNC	ENSMUSG00000079111.4	novel	1829	5	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTATGGTCTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	143389609	143407656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_143389802_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020533	chr5	+	283	2	ISM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	2401	32833	2401	-32833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCAGGTGAGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	143452739	143458864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143452860_143458701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020534	chr5	+	294	2	ISM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	8424	31147	8424	-31147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCGTTGGGCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	143458762	143460550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143458874_143460367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020535	chr5	+	258	2	ISM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	17045	21588	17045	-21588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTCAAGCAGGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	143467383	143470109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143467513_143469980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020536	chr5	+	268	2	ISM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	38359	2635	38359	-2635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACGTCATGATTCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	143488697	143489062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143488865_143488961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020537	chr5	+	267	1	Genic_Genomic	ENSMUSG00000039206.14	novel	NA	NA	NA	NA	41108	16	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGCGTTATCAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	143491446	143491713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_143491400_143491700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020538	chr5	-	980	4	ISM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	13250	2833	13207	-985	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTGACAGCTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	143500541	143492221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020539	chr5	+	918	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	1	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGGTGTTTTCCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	143534501	143537693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_143534890_143537163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020540	chr5	+	366	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	163	1669	123	-1669	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTCTGCCTGGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	143534623	143548611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_143534890_143548511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020541	chr5	+	1566	1	ISM	ENSMUSG00000118332.2	ENSMUST00000119488.2	2202	2	14254	4	14216	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGTATGTTCTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	143548716	143550282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143548700_143550300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020542	chr5	+	593	2	ISM	ENSMUSG00000018001.19	ENSMUST00000110727.2	2068	13	56167	-27	56167	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTCAGATATATAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	143693162	143694038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143693305_143693587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020543	chr5	+	459	1	ISM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	87345	0	58551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	143695546	143696005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143695500_143696000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020544	chr5	+	2260	1	FSM	ENSMUSG00000097287.4	ENSMUST00000196629.2	2265	1	6	-1	6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTTCTTGCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143752071	143754331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_143752100_143754300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020545	chr5	-	1074	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTTATTTTATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	143846665	143839520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020546	chr5	-	295	1	ISM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	6747	94	6625	1	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGCTTGTCTTGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	143839910	143839615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143839600_143839900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020547	chr5	-	965	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	15	205	15	-110	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGACTGGGGGCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	143846642	143839726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020548	chr5	-	365	2	ISM	ENSMUSG00000029610.14	ENST00000395236.2	761	3	4	1766	4	-1766	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGTGGGACTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	143846531	143841382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143841615_143846398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020549	chr5	+	421	3	FSM	ENSMUSG00000079109.12	ENST00000394921.8	413	3	-1	-7	-1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATCCCAGCCTTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	143848735	143851628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_143848879_143850219_143850307_143851437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020550	chr5	+	186	1	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	1164	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTCACCATCCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	143851435	143851621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_143851400_143851600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020551	chr5	+	1194	4	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	6055	5086	6055	-5086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGTGTGTTCTTACCGG	NA	NA	NA	NA	NA	NA	NA	NA	143856326	143862891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143856427_143858833_143858919_143860294_143860451_143862038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020552	chr5	+	1187	3	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	10013	2893	10013	-2893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGCACACAGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	143860284	143865084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143860451_143862038_143862892_143864916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020553	chr5	+	1197	4	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	11848	1823	11848	-1823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCGGAAGTCAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	143862119	143866154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_143862892_143864916_143865085_143865759_143865861_143865998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020554	chr5	-	345	1	NIC	ENSMUSG00000029617.11	novel	1683	13	NA	NA	26559	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCCTGTTGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	143925071	143924726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_143924700_143925100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020555	chr5	-	628	3	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	23222	1	23181	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCCTGTTGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	143928449	143924727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143925068_143927455_143927584_143928289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020556	chr5	-	439	3	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	22193	2729	22152	-2722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGGGCCTGGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	143929478	143927455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143927584_143928289_143928449_143929326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020557	chr5	-	425	3	ISM	ENSMUSG00000029617.11	ENST00000628813.2	1683	13	16534	3614	16534	-3556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCCCAGCGACTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	143935096	143928289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143928449_143929326_143929477_143934980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020558	chr5	-	422	4	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	10639	10260	10598	-10253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGTAATGATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	143941032	143934986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143935093_143935361_143935424_143938194_143938277_143940860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020559	chr5	-	439	5	ISM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	3353	13468	3312	-13461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTGCATTCTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	143948318	143938194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020560	chr5	-	433	5	ISM	ENSMUSG00000029617.11	ENST00000626257.2	1726	13	69	21308	9	-21308	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAAATTCTTCCATCG	NA	NA	NA	NA	NA	NA	NA	NA	143951662	143946041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_143946105_143947848_143947897_143948269_143948348_143949811_143949910_143951516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020561	chr5	-	529	2	ISM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	13299	14227	13299	-14227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCCAGCAACTCACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	144147134	144145486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_144145559_144146677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020562	chr5	-	508	4	ISM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	7235	18129	7235	-18129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGCACGTGGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	144153198	144149388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_144149493_144150873_144150975_144151062_144151238_144153070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020563	chr5	+	673	3	FSM	ENSMUSG00000047843.17	ENSMUST00000110695.8	669	3	9	-13	9	13	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCGACCATGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	144181255	144201218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_144181426_144192619_144192723_144200818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020564	chr5	+	573	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	36	346	36	-167	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTTTGTAAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	144192079	144201038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_144192330_144192619_144192723_144200818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020565	chr5	+	464	1	ISM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	8877	0	8877	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGCAGTCAAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	144200920	144201384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_144200900_144201400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020566	chr5	+	2868	8	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	8345	-1	8248	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATGTCTTGTCTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	145059369	145066510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020567	chr5	+	2171	3	NNC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	12414	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCATGTCTTGTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	145063535	145066509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_145063743_145064445_145064531_145064630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020568	chr5	+	1981	2	ISM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	13410	0	13313	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCATGTCTTGTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	145064434	145066509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_145064537_145064630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020569	chr5	+	1889	1	Genic_Genomic	ENSMUSG00000029622.17	novel	NA	NA	NA	NA	13503	4	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTTGTCTGGGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	145064624	145066513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_145064600_145066500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020570	chr5	-	1969	4	ISM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	5086	0	5086	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGATGCTTCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	145071962	145065578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020571	chr5	+	175	2	ISM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	37	6704	37	-6704	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAAGAACACAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	145077261	145078177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_145077374_145078114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020572	chr5	+	376	3	ISM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	889	3050	889	-3050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATGGCTAAATTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	145078113	145081831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_145078247_145079257_145079378_145081708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020573	chr5	+	414	3	ISM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	2030	1461	2030	-1461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCCCAGCGGTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	145079254	145083420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_145079378_145081708_145081832_145083252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020574	chr5	+	538	3	ISM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	4482	-9	4482	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTTTAAGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	145081706	145084890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_145081832_145083252_145083420_145084644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020575	chr5	+	404	2	NNC	ENSMUSG00000038722.18	novel	705	5	NA	NA	6030	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCTTTCTTTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	145083254	145084886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_145083417_145084644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020576	chr5	-	202	1	ISM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	19393	0	19393	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGCGTCTCATATATA	NA	NA	NA	NA	NA	NA	NA	NA	145084525	145084323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_145084300_145084500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020577	chr5	+	247	1	Genic_Genomic	ENSMUSG00000038722.18	novel	NA	NA	NA	NA	7419	2	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTTTAAGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	145084643	145084890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_145084600_145084900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020578	chr5	-	218	2	ISM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	5927	12105	5927	-12105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTCTGCCCTGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	145097991	145096428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_145096504_145097848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020579	chr5	-	251	2	ISM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	1889	13574	1889	-13574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGGGCGCGTCGGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	145102029	145097897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_145097990_145101870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020580	chr5	+	525	1	ISM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	14304	0	14263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	145118326	145118851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_145118300_145118900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020581	chr5	-	688	4	NNC	ENSMUSG00000038690.16	novel	955	4	NA	NA	-199	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTAGTCATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	145128601	145120507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_145120678_145121341_145121459_145123931_145124044_145128312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020582	chr5	-	829	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	126	0	126	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTAGTCATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	145128746	145120507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020583	chr5	-	1065	1	ISM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	5858	0	5611	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTTGTTTCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	145132820	145131755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_145131800_145132800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020584	chr5	-	1380	2	FSM	ENSMUSG00000029627.13	ENST00000426306.2	1376	2	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCCTAGCTTCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	145138433	145131973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_145133010_145138089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020585	chr5	-	1070	2	ISM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	3155	221	2908	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCTCCTAGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	145135523	145131976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_145133010_145135486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020586	chr5	+	233	2	FSM	ENSMUSG00000007812.17	ENST00000449244.5	233	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGACCCTCCTGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	145172114	145172674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_145172202_145172528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020587	chr5	+	155	1	NIC	ENSMUSG00000007812.17	novel	1765	5	NA	NA	408	3	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCCTCCTGTTGATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	145172522	145172677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_+_145172500_145172700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020588	chr5	+	370	1	Genic_Genomic	ENSMUSG00000007812.17	novel	NA	NA	NA	NA	2654	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGATGTCTTGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	145174768	145175138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_145174800_145175100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020589	chr5	+	200	1	ISM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	15380	0	11798	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGACTCTTTGTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	145183912	145184112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_145183900_145184100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020590	chr5	-	793	3	ISM	ENSMUSG00000038656.6	ENST00000354829.7	808	4	425	0	425	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGAGAAAACTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	145387362	145377166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_145377330_145378763_145378991_145386959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020591	chr5	-	1565	1	Genic_Genomic	ENSMUSG00000029634.16	novel	NA	NA	NA	NA	10146	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGCAAACTTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	146147565	146146000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_146146000_146147600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020592	chr5	-	1285	2	ISM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	4829	742	4754	-742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGTAATGGAGATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	146152957	146147508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_146148743_146152906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020593	chr5	+	749	1	FSM	ENSMUSG00000094090.3	ENSMUST00000178171.3	1233	1	488	-4	488	4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTTGTTTTATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	146512185	146512934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_146512200_146512900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020594	chr5	+	1690	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	53	113	53	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAATTGTCATCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	146769752	146773729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020595	chr5	+	1051	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	13	3	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTGAAGTGTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	146770024	146772793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020596	chr5	+	393	3	ISM	ENSMUSG00000041453.13	ENSMUST00000075453.9	899	6	111	1485	104	-1485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCAAGGTAAGTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	146770115	146771310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_146770377_146770993_146771073_146771257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020597	chr5	+	1023	3	ISM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	1780	-626	1780	-420	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAGTCGGCAGTGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	146771791	146773422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_146771915_146772373_146772525_146772673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020598	chr5	-	1021	2	Antisense	novelGene_ENSMUSG00000041453.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGAGCAAAGACCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	146773550	146772371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr5_-_146772513_146772670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020599	chr5	+	1011	2	NNC	ENSMUSG00000041453.13	novel	1856	6	NA	NA	2362	-295	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACATCCTGTTATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	146772373	146773547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_+_146772525_146772687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020600	chr5	+	1101	1	Genic_Genomic	ENSMUSG00000041453.13	novel	NA	NA	NA	NA	2734	4	mono-exon	FALSE	NA	NA	NA	NA	NA	1122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGTGATGGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	146772745	146773846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_146772700_146773800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020601	chr5	+	444	2	ISM	ENSMUSG00000029641.9	ENSMUST00000031646.8	1126	4	779	345	779	-345	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGGCCTCGATCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	146782659	146784191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_146782730_146783817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020602	chr5	+	462	1	Genic_Genomic	ENSMUSG00000029641.9	novel	NA	NA	NA	NA	2195	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTTTTCTGAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	146784075	146784537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_146784100_146784500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020603	chr5	-	742	1	ISM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	11471	0	11435	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTCGGGGAATATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	146889124	146888382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_146888400_146889100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020604	chr5	+	694	5	ISM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	4068	0	4020	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGCTGTTTCCGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	146889534	146892424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020605	chr5	-	1616	3	ISM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	4767	34	4729	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATCCATGAATCATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	146895830	146891363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_146892626_146893596_146893755_146895634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020606	chr5	+	1195	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGAGTGGTTTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	147013860	147015896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_147014504_147015344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020607	chr5	+	1140	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTTTGGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	147014154	147048173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_147014504_147038038_147038114_147047457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020608	chr5	+	266	1	FSM	ENSMUSG00000107336.2	ENSMUST00000202351.2	996	1	730	0	730	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCACCTGGAGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	147365277	147365543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_147365300_147365500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020609	chr5	+	588	1	FSM	ENSMUSG00000106891.2	ENSMUST00000202491.2	1057	1	469	0	469	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAACGGAAGCAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	147366108	147366696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_147366100_147366700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020610	chr5	+	495	5	ISM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	91	3797	-76	-404	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGCACTCAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	147797361	147809469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020611	chr5	+	821	5	ISM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	2091	528	1899	407	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTTAGGTATAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	147799361	147812738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020612	chr5	+	514	1	Genic_Genomic	ENSMUSG00000029649.11	novel	NA	NA	NA	NA	15292	2	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTTGTGGACTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	147812754	147813268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_147812800_147813300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020613	chr5	-	1166	1	Genic_Genomic	ENSMUSG00000001687.16	novel	NA	NA	NA	NA	46863	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTGTTGATGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	148442609	148441443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_148441400_148442600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020614	chr5	-	1764	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	326	447	326	47	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATATGTGTAGATTATAT	NA	NA	NA	NA	NA	NA	NA	NA	148489146	148441891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020615	chr5	-	242	1	Genic_Genomic	ENSMUSG00000108207.3	novel	NA	NA	NA	NA	5720	5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTATGTAATGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	148890794	148890552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_148890600_148890800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020616	chr5	-	579	1	NIC	ENSMUSG00000108207.3	novel	1526	4	NA	NA	4503	-875	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCCGGTCAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	148892011	148891432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr5_-_148891400_148892000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020617	chr5	-	674	2	FSM	ENSMUSG00000085237.3	ENSMUST00000202229.2	767	2	94	-1	94	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCCGGTCAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	148933225	148891432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_148892012_148933130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020618	chr5	-	2843	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTTGTAACTTTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	148989850	148983506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020619	chr5	-	3160	4	NNC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	76	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGTCTTTGTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	148988034	148983511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr5_-_148985724_148986546_148986712_148987104_148987251_148987397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020620	chr5	-	676	1	ISM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	4137	1526	2397	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	148985713	148985037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_148985000_148985700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020621	chr5	-	320	1	Genic_Genomic	ENSMUSG00000066551.13	novel	NA	NA	NA	NA	1582	2	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAAACTTTAAGCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	148986528	148986208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_148986200_148986500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020622	chr5	+	733	2	ISM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	3628	20991	3628	-20814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTACGTACTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	149125153	149131252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_149125284_149130649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020623	chr5	+	2237	2	ISM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	24925	5	24925	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTTTGTTGGTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	149146450	149152238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_149146611_149150161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020624	chr5	+	602	1	ISM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	30273	0	30117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	149151642	149152244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_149151600_149152200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020625	chr5	+	1251	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGAGTCTTTTATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	149201576	149224963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020626	chr5	+	640	3	ISM	ENSMUSG00000029659.17	ENSMUST00000093110.12	2953	5	38	4729	38	-4708	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATGGACATGGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	149335251	149350459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_149335721_149345598_149345709_149350398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020627	chr5	+	777	2	ISM	ENSMUSG00000029659.17	ENSMUST00000201083.2	2669	5	13464	1342	13464	-1342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGCCAGTACTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	149350768	149353825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_149350972_149353251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020628	chr5	+	621	1	Genic_Genomic	ENSMUSG00000029659.17	novel	NA	NA	NA	NA	17267	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTGGGTCCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	149354571	149355192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_+_149354600_149355200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020629	chr5	+	1722	1	FSM	ENSMUSG00000107164.2	ENSMUST00000201035.2	1721	1	1	-2	1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCTTAGTTACTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	149365326	149367048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_+_149365300_149367000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020630	chr5	-	293	1	FSM	ENSMUSG00000080002.3	ENSMUST00000116118.3	459	1	287	-121	287	121	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATATATAGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	149584401	149584108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_149584100_149584400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020631	chr5	+	497	1	ISM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	83873	0	83873	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGGCTTCTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	149685567	149686064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_149685600_149686100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020632	chr5	+	806	2	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	4091	24337	4091	-24337	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTTTTTATTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	150466213	150468456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_150466923_150468359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020633	chr5	+	820	4	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	9859	16308	9859	-16308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCAGCTATGGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	150471981	150476485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_150472348_150474296_150474479_150475671_150475860_150476401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020634	chr5	+	795	3	ISM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	28229	0	28229	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCACCCAGGCCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	150490351	150492793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_+_150490595_150491071_150491234_150492403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020635	chr5	-	2746	1	Genic_Genomic	ENSMUSG00000029655.18	novel	NA	NA	NA	NA	12025	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGTTTCTTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	150562181	150559435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr5_-_150559400_150562200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020636	chr5	-	439	1	ISM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	22607	6595	7736	4	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATTTATTTACATATGA	NA	NA	NA	NA	NA	NA	NA	NA	150566470	150566031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_150566000_150566500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020637	chr5	-	2108	3	FSM	ENSMUSG00000029655.18	ENST00000674327.1	2107	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATCATTTATTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	150585981	150566035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr5_-_150566781_150574079_150574205_150584743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020638	chr5	-	821	5	ISM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	5558	0	5558	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGTATTTTGCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	151569149	151566220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020639	chr6	+	920	2	FSM	ENSMUSG00000032766.10	ENSMUST00000031670.10	919	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTGACTTAAGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	4003902	4008445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_4004412_4008034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020640	chr6	-	1515	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTTCTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	4086971	4076898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020641	chr6	+	195	4	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	10159	24589	10159	-24589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGAGTTAGGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	4515651	4516955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4515683_4515960_4516015_4516391_4516446_4516899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020642	chr6	+	142	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	13298	22210	13298	-22210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTCCCAAGGTAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	4518790	4519334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4518845_4518947_4518993_4519291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020643	chr6	+	199	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	13455	21615	13455	-21615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGTCGTTGACATAAG	NA	NA	NA	NA	NA	NA	NA	NA	4518947	4519929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4518993_4519291_4519346_4519829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020644	chr6	+	246	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	14335	21274	14335	-21274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGGTCACCACCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	4519827	4520270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4519929_4520037_4520083_4520170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020645	chr6	+	199	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	14545	20894	14545	-20894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGTTTTACAGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	4520037	4520650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4520083_4520170_4520270_4520595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020646	chr6	+	262	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	14678	20664	14678	-20664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTCTGAATCCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	4520170	4520880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4520270_4520595_4520650_4520771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020647	chr6	+	219	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	15322	20049	15322	-20049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTCAGATAAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4520814	4521495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4520880_4521230_4521285_4521395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020648	chr6	+	247	4	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	16949	17388	16949	-17388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGACCCCAGGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	4522441	4524156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4522496_4522955_4523055_4523593_4523648_4524116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020649	chr6	+	146	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	20388	14390	20388	-14390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTATTATTTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	4525880	4527154	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4525927_4527054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020650	chr6	+	209	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	21561	13130	21561	-13130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTCGGTGTTAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	4527053	4528414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4527154_4528305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020651	chr6	+	273	4	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	22810	10534	22810	-10534	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAGAAACCACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	4528302	4531010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4528414_4529067_4529122_4530171_4530226_4530956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020652	chr6	+	137	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	24679	10412	24679	-10412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAATGGATTTGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	4530171	4531132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4530226_4530956_4531011_4531103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020653	chr6	+	202	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	25470	10207	25470	-10207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCATCTGTAAGTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	4530962	4531337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4531011_4531103_4531158_4531237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020654	chr6	+	208	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	25745	8755	25745	-8755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAGTGTGAGTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	4531237	4532789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4531346_4531894_4531949_4532743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020655	chr6	+	271	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	26402	7640	26402	-7640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGATTTCAAACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	4531894	4533904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4531949_4532743_4532798_4533741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020656	chr6	+	259	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	28261	6855	28261	-6855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGACGCCATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	4533753	4534689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4533904_4534580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020657	chr6	+	196	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	29088	6076	29088	-6076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGAAGCTGGTCGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	4534580	4535468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4534689_4535380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020658	chr6	+	221	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	29938	5460	29938	-5460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATGTAAATGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4535430	4536084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4535489_4535830_4535885_4535975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020659	chr6	+	167	2	NNC	ENSMUSG00000029661.17	novel	5348	52	NA	NA	30338	-5460	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATGTAAATGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4535830	4536084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_4535889_4535975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020660	chr6	+	273	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	30481	4839	30481	-4839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAAAAAGTGATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4535973	4536705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4536084_4536207_4536262_4536596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020661	chr6	+	272	3	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	31104	4085	31104	-4085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGACTTGGAAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	4536596	4537459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4536705_4537172_4537227_4537349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020662	chr6	+	260	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	31856	3616	31856	-3616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTCTCAATAACCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	4537348	4537928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4537458_4537777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020663	chr6	+	382	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	32347	2734	32347	-2734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTAATTCTCCAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	4537839	4538810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4538037_4538625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020664	chr6	+	364	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	33142	1894	33142	-1894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCTGAGGGCAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	4538634	4539650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4538811_4539462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020665	chr6	+	189	1	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	34024	1839	34024	-1839	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCATGGGAAAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	4539516	4539705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4539500_4539700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020666	chr6	+	331	2	ISM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	34034	877	34034	-877	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCAACCTAAATTAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	4539526	4540667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_4539706_4540515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020667	chr6	+	222	1	Genic_Genomic	ENSMUSG00000029661.17	novel	NA	NA	NA	NA	35834	4	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTTTGATGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	4541326	4541548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_4541300_4541500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020668	chr6	-	593	5	NNC	ENSMUSG00000004631.16	novel	1703	11	NA	NA	55473	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTGTGTTGAGAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	4691622	4674505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_4674633_4677158_4677198_4678066_4678111_4689578_4689768_4691428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020669	chr6	-	129	1	NIC	ENSMUSG00000004631.16	novel	1776	12	NA	NA	72461	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTGTGTTGAGAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	4674634	4674505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_4674500_4674600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020670	chr6	+	188	2	Antisense	novelGene_ENSMUSG00000004631.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAATGATTAACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	4674505	4678110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr6_+_4674635_4678051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020671	chr6	-	524	4	NNC	ENSMUSG00000004631.16	novel	1346	11	NA	NA	55454	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTGCAGCCGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	4691641	4674577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_4674633_4678043_4678111_4689578_4689768_4691428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020672	chr6	-	279	3	ISM	ENSMUSG00000004631.16	ENST00000644116.1	1547	11	57426	2656	57384	-2584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATAATAAAGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4689711	4677161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_4677198_4678066_4678111_4689512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020673	chr6	-	649	5	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	52906	2584	52906	-2584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATAATAAAGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4694189	4677161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_4677198_4678066_4678111_4689578_4689768_4691428_4691641_4694021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020674	chr6	-	736	4	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	39821	15030	39821	-15030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACATGCCGTTGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	4707274	4689607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_4689768_4691428_4691641_4694021_4694185_4707073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020675	chr6	-	579	4	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	35713	16900	35713	-16900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTCCTAATACTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	4711382	4691477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_4691641_4694021_4694185_4707073_4707252_4711307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020676	chr6	-	264	2	ISM	ENSMUSG00000004631.16	ENST00000644116.1	1547	11	35755	32578	35713	-32506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGAGGGGTAAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	4711382	4707083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_4707273_4711307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020677	chr6	-	233	2	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	29015	36730	29015	-36730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATGGAAAGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	4718080	4711307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_4711381_4717920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020678	chr6	-	444	3	ISM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	-42	43338	0	-43338	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGAACAAGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	4747137	4717915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_4718079_4719373_4719497_4746979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020679	chr6	-	1096	3	ISM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	25456	-14	15499	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCCCAAATGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	5230830	5220837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5221723_5230400_5230530_5230748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020680	chr6	-	488	3	ISM	ENSMUSG00000029759.10	ENST00000427422.5	706	5	9331	0	9331	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCTAAAACGTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	5236998	5221562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5221723_5232323_5232525_5236871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020681	chr6	-	543	4	ISM	ENSMUSG00000029759.10	ENST00000427422.5	706	5	0	10764	0	-10764	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGGTTTTTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	5246329	5232326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5232525_5236871_5236999_5240812_5240979_5246277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020682	chr6	-	171	1	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	34138	0	34138	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGTCTTCTCGAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5264317	5264146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5264100_5264300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020683	chr6	-	238	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	32245	1194	32245	-1194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTACTGTGAACTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	5266210	5265340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5265480_5266111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020684	chr6	-	192	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	31411	1982	31411	-1982	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCTGCATCAGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	5267044	5266128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5266241_5266964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020685	chr6	-	202	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	29360	2816	29360	-2816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTAGTTTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5269095	5266962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5267047_5268977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020686	chr6	-	219	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	26003	4941	26003	-4941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGAACCTACACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	5272452	5269087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5269179_5272324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020687	chr6	-	285	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	25288	8187	25288	-8187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAAGGTACTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	5273167	5272333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5272452_5273000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020688	chr6	-	149	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	20529	8926	20529	-8926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGAGAGTCAGCTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	5277926	5273072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5273167_5277871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020689	chr6	-	214	2	ISM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	101	24866	101	-24866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATGGGAAGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5298354	5289012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_5289084_5298211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020690	chr6	-	792	1	ISM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	175109	0	139106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6042009	6041217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_6041200_6042000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020691	chr6	-	254	2	FSM	ENSMUSG00000015112.16	ENST00000538551.1	245	2	-8	-1	-8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAAGGTGGTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	6181123	6152407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_6152505_6180966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020692	chr6	-	225	2	NNC	ENSMUSG00000015112.16	novel	245	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGAAGGTGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6181102	6152408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_6152498_6180966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020693	chr6	-	238	2	NNC	ENSMUSG00000015112.16	novel	245	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGAAGGTGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6181113	6152408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_6152498_6180964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020694	chr6	-	248	2	NNC	ENSMUSG00000015112.16	novel	245	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGAAGGTGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6181116	6152408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_6152505_6180964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020695	chr6	-	240	2	NNC	ENSMUSG00000015112.16	novel	245	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGAAGGTGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	6181112	6152408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_6152507_6180970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020696	chr6	-	233	2	NIC	ENSMUSG00000015112.16	novel	245	2	NA	NA	4	-4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTAAGGAAGGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	6181111	6152412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_6152505_6180970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020697	chr6	-	754	1	Genic_Genomic	ENSMUSG00000042541.11	novel	NA	NA	NA	NA	20622	11	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCAAAGTGATTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	6558036	6557282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_6557300_6558000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020698	chr6	-	980	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	-2	494	-2	-494	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGTGGGAGATTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	6578660	6557787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_6558492_6560407_6560502_6578478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020699	chr6	+	369	2	FSM	ENSMUSG00000042505.7	ENST00000432641.3	369	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGATACATGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	6956020	7039048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_6956205_7038863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020700	chr6	+	237	2	NNC	ENSMUSG00000042505.7	novel	369	2	NA	NA	130	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTGATACATGATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	6956150	7039049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_6956205_7038866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020701	chr6	+	200	1	NIC	ENSMUSG00000042505.7	novel	4323	2	NA	NA	82830	2	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGATACATGATCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	7038850	7039050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_7038800_7039000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020702	chr6	-	360	1	Genic_Genomic	ENSMUSG00000029752.13	novel	NA	NA	NA	NA	13925	2	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGTTGTGGGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	7675526	7675166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_7675200_7675500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020703	chr6	-	1034	6	FSM	ENSMUSG00000029752.13	ENST00000641079.1	1068	6	113	-79	66	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAATAAAAGTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	7689385	7675196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_7675525_7675992_7676149_7681249_7681378_7681933_7682036_7682270_7682457_7689251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020704	chr6	-	696	5	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	11404	0	11404	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTCTGAAGGTCGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	7678047	7675275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020705	chr6	-	359	4	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	9238	1019	9238	-1019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATCATCGGTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	7680213	7676294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_7676317_7677230_7677332_7677939_7678047_7680084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020706	chr6	-	359	3	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	8071	2670	8071	-2670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGGTAAGCGCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	7681380	7677945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_7678047_7680084_7680212_7681249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020707	chr6	-	417	4	ISM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	7122	4808	7122	-4808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGATTTTATTATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	7682329	7680083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_7680212_7681249_7681378_7681933_7682036_7682270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020708	chr6	-	879	5	ISM	ENSMUSG00000029752.13	ENST00000394309.7	1729	11	2	6000	0	3893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGATCTCCTGGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	7689499	7681275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_7681378_7681933_7682036_7682270_7682457_7685168_7685401_7689242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020709	chr6	-	573	3	ISM	ENSMUSG00000029752.13	ENSMUST00000115542.8	2016	12	3346	7227	-24	2773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTATGAAGTTTTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	7689525	7682395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_7682457_7685168_7685407_7689251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020710	chr6	-	247	1	NIC	ENSMUSG00000029752.13	novel	2016	12	NA	NA	4043	7	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTAACTATTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	7685408	7685161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_7685200_7685400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020711	chr6	-	378	2	NIC	ENSMUSG00000029752.13	novel	1729	11	NA	NA	0	-104	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAATAAGAAAGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	7689501	7685272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_7685401_7689251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020712	chr6	-	458	3	ISM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	0	10198	0	-198	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGAGATTATCCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	7693254	7685366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_7685407_7689251_7689524_7693108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020713	chr6	-	228	1	Genic_Genomic	ENSMUSG00000012483.5	novel	NA	NA	NA	NA	3012	2	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGTCAATTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	8256161	8255933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_8255900_8256200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020714	chr6	-	745	5	FSM	ENSMUSG00000012483.5	ENST00000396682.6	626	5	2	-121	2	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAATCTATTATGA	NA	NA	NA	NA	NA	NA	NA	NA	8259510	8256039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999_8259264_8259421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020715	chr6	-	623	2	FSM	ENSMUSG00000089890.2	ENSMUST00000161366.2	626	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCTTCCTTTACTACC	NA	NA	NA	NA	NA	NA	NA	NA	8364133	8354055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_8354405_8363859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020716	chr6	+	139	1	Genic_Genomic	ENSMUSG00000089862.9	novel	NA	NA	NA	NA	158164	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTCATTGCATTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	8428629	8428768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_8428600_8428800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020717	chr6	-	620	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	-7	-3	-7	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAATTTCTCTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	11907489	11900287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020718	chr6	-	601	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	6	2	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGAATTTCTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	11907476	11900288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_11900591_11905200_11905262_11906023_11906108_11907322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020719	chr6	-	605	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	2	2	intron_retention	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGAATTTCTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	11907480	11900288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_11900591_11905200_11905253_11906014_11906108_11907322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020720	chr6	-	566	4	NNC	ENSMUSG00000029632.8	novel	610	4	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGAATTTCTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	11907445	11900288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_11900591_11905200_11905253_11906018_11906108_11907322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020721	chr6	+	1281	2	ISM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	13530	3855	13530	-3855	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTCGATGCTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	13083367	13085413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_13083422_13084186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020722	chr6	+	1272	1	Genic_Genomic	ENSMUSG00000029571.15	novel	NA	NA	NA	NA	18160	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTCATCCTCTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	13087997	13089269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_13088000_13089300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020723	chr6	-	984	1	Genic_Genomic	ENSMUSG00000029569.10	novel	NA	NA	NA	NA	26431	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTCTCAGACTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	13581668	13580684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_13580700_13581700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020724	chr6	-	2045	1	Genic_Genomic	ENSMUSG00000052419.8	novel	NA	NA	NA	NA	1688	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTATTTCTGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	13869776	13867731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_13867700_13869800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020725	chr6	-	2129	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	33	1015	-19	-1015	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACTACTCCAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	13871484	13868748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_13870740_13871054_13871146_13871437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020726	chr6	-	354	1	ISM	ENSMUSG00000029553.11	ENSMUST00000031533.11	1787	7	64227	488	11264	7	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCTGAAAGGAATTATAT	NA	NA	NA	NA	NA	NA	NA	NA	16834213	16833859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_16833900_16834200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020727	chr6	-	447	3	ISM	ENSMUSG00000029553.11	ENST00000393485.5	1730	4	1224	1171	1224	-1171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGATTTTTAATTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	16844253	16835037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_16835349_16840467_16840544_16844193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020728	chr6	+	2429	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	13	-2	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGTCTTTCTATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	17065160	17105824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020729	chr6	+	702	1	ISM	ENSMUSG00000029552.20	ENSMUST00000076654.9	2685	9	39903	0	39903	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTTCTATGTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17105125	17105827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_17105100_17105800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020730	chr6	+	763	2	ISM	ENSMUSG00000000058.7	ENSMUST00000000058.7	2733	3	731	1623	557	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTACATTAACAAAAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	17281914	17287491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_17282082_17286895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020731	chr6	+	741	1	ISM	ENSMUSG00000000058.7	ENSMUST00000000058.7	2733	3	7190	0	7016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATAACAAGGACACGAG	NA	NA	NA	NA	NA	NA	NA	NA	17288373	17289114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_17288400_17289100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020732	chr6	+	1777	3	FSM	ENSMUSG00000007655.17	ENSMUST00000007799.13	2522	3	12	733	2	162	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGCAAAGCCCTTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	17306345	17340590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_17306479_17307879_17308045_17339111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020733	chr6	+	222	2	ISM	ENSMUSG00000007655.17	ENST00000393470.1	582	3	2	31425	2	-158	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATGTTGCTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	17306388	17308044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_17306479_17307912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020734	chr6	+	1737	2	FSM	ENSMUSG00000007655.17	ENSMUST00000115453.2	2746	2	0	1009	0	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATCAAGGTTTAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	17307638	17340442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_17308045_17339111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020735	chr6	+	160	1	ISM	ENSMUSG00000007655.17	ENSMUST00000007799.13	2522	3	32980	1850	31675	4	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTCCCCCCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	17339313	17339473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_17339300_17339500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020736	chr6	+	1515	1	Genic_Genomic	ENSMUSG00000007655.17	novel	NA	NA	NA	NA	32300	2	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGCTAAAAGTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	17339938	17341453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_17339900_17341500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020737	chr6	+	1738	7	ISM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	17123	505	17123	-505	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTCCTATGCATCATA	NA	NA	NA	NA	NA	NA	NA	NA	17654104	17666466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020738	chr6	+	1204	1	Genic_Genomic	ENSMUSG00000015733.14	novel	NA	NA	NA	NA	28787	1	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTAAGTTGTGTGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	17665768	17666972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_17665800_17667000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020739	chr6	+	525	2	Genic_Genomic	ENSMUSG00000071568.6	novel	508	1	NA	NA	-39	82	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTCAGGGTTGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18824511	18825140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_18824933_18825036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020740	chr6	+	524	2	Genic_Genomic	ENSMUSG00000071568.6	novel	508	1	NA	NA	-38	82	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTCAGGGTTGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	18824512	18825140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_18824925_18825028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020741	chr6	-	737	2	FSM	ENSMUSG00000106874.2	ENSMUST00000201775.2	737	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCCGTCTCTTGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	18846762	18845908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_18846507_18846623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020742	chr6	+	776	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	32	-1	32	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTCTTTTCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	18848609	18854053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020743	chr6	+	580	2	NNC	ENSMUSG00000044155.12	novel	807	4	NA	NA	2967	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	18851633	18854052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_18851761_18853599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020744	chr6	-	673	1	Genic_Genomic	ENSMUSG00000029669.15	novel	NA	NA	NA	NA	80022	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGTTTGCGTATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	21772065	21771392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_21771400_21772100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020745	chr6	-	679	2	ISM	ENSMUSG00000029669.15	ENSMUST00000120965.8	2157	7	52162	911	52162	-911	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATGAAGGTTAACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	21799925	21772304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_21772936_21799877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020746	chr6	+	587	2	FSM	ENSMUSG00000062980.16	ENST00000340646.9	584	2	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTGAGTTTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	21985993	21987062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_21986131_21986612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020747	chr6	-	317	1	Genic_Genomic	ENSMUSG00000029672.17	novel	NA	NA	NA	NA	32545	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGTAGTTGCAGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	22306834	22306517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_22306500_22306800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020748	chr6	-	602	6	ISM	ENSMUSG00000029672.17	ENST00000312214.5	660	7	10716	-83	10716	83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCATGTGGCCGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	22328663	22308367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020749	chr6	+	1630	2	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	68685	51445	68685	-3897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCATGGTTCTGTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	22994515	23000780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_22994564_22999198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020750	chr6	+	1806	3	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	75346	36666	75346	11552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAACTAGTGAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	23001176	23016229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_23002746_23007272_23007418_23016137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020751	chr6	+	741	2	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	124565	320	124565	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGTAACTTATGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	23050395	23052575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_23050532_23051970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020752	chr6	+	729	1	ISM	ENSMUSG00000068748.8	ENSMUST00000090568.7	8068	30	176686	0	126356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTTCACTTGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	23052186	23052915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_23052200_23052900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020753	chr6	-	881	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCATGTTATTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	24528013	24518659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020754	chr6	-	318	4	FSM	ENSMUSG00000023089.13	ENSMUST00000118558.5	315	4	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTTATTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	24527568	24518660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_24518824_24519190_24519257_24527271_24527317_24527524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020755	chr6	-	1992	1	Genic_Genomic	ENSMUSG00000029684.15	novel	NA	NA	NA	NA	49193	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTCTCATTTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	24615794	24613802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_24613800_24615800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020756	chr6	-	2061	2	ISM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	46628	590	46607	-590	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTTTTCAGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	24618380	24614393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_24616346_24618271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020757	chr6	+	1584	4	FSM	ENSMUSG00000029680.3	ENST00000223026.9	1584	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCATCCTTTTAAAAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	24748323	24766115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_24748392_24755735_24756738_24763794_24763885_24765691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020758	chr6	-	554	5	ISM	ENSMUSG00000029676.16	ENST00000655761.1	1346	9	30349	0	30349	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGACTTGTTATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25764309	25753146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_25753354_25756161_25756319_25757223_25757269_25758816_25758903_25764250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020759	chr6	-	482	3	NNC	ENSMUSG00000029676.16	novel	1346	9	NA	NA	35756	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGACTTGTTATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25758902	25753146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_25753354_25756161_25756351_25758816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020760	chr6	-	593	5	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	23009	3014	23009	1522	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTTCCCAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	25771649	25756161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020761	chr6	-	709	4	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	18841	5669	18841	-1133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGACAATTTATAACGC	NA	NA	NA	NA	NA	NA	NA	NA	25775817	25758816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_25758903_25764250_25764424_25771517_25771674_25775523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020762	chr6	-	669	4	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	15689	11186	15689	-6650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATCTCCACGGAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25778969	25764333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_25764424_25771517_25771674_25775523_25775815_25778837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020763	chr6	-	579	4	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	6	18463	6	-13927	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGACTTGAGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	25794652	25771610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_25771674_25775523_25775815_25778837_25778969_25794558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020764	chr6	-	338	1	ISM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	5296	0	5296	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAACTCTTGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	28416427	28416089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_28416100_28416400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020765	chr6	+	531	5	ISM	ENSMUSG00000020440.14	ENSMUST00000169841.2	768	7	24	482	24	-482	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTCACGTCCCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	28423612	28425863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020766	chr6	+	841	4	ISM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	1160	0	1130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	28424718	28426601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28424831_28425171_28425244_28425737_28425864_28426070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020767	chr6	+	534	1	Genic_Genomic	ENSMUSG00000020440.14	novel	NA	NA	NA	NA	2480	1	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGTGTTGTCTGTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28426068	28426602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_28426100_28426600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020768	chr6	+	145	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	235	375913	224	-375913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGAAATCTTGCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	28480581	28512918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28480642_28512833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020769	chr6	+	215	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	32512	368598	32501	-368598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGTATGGGATGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	28512858	28520233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28512984_28520143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020770	chr6	+	168	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	39829	365027	39818	-365027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCATGCAACTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	28520175	28523804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28520265_28523725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020771	chr6	+	174	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	45737	361879	45726	-361879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCAGGTCACCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	28526083	28526952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28526213_28526907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020772	chr6	+	127	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	46560	361222	46549	-361222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCCGGAGCCCTTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	28526906	28527609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28527000_28527575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020773	chr6	+	170	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	47257	359881	47246	-359881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGCTGTGTGGACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	28527603	28528950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28527735_28528911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020774	chr6	+	201	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	48564	357331	48553	-357331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCATTCTCAGCATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	28528910	28531500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28529019_28531407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020775	chr6	+	207	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	51059	343234	51048	-343234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAACAGGAAGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	28531405	28545597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28531499_28545483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020776	chr6	+	147	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	65135	262702	65124	-262702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCCTACATGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	28545481	28626129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28545598_28626098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020777	chr6	+	182	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	145749	220186	145738	-220186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGGAATGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28626095	28668645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28626189_28668556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020778	chr6	+	170	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	188210	181730	188199	-181730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCTTCACACTACGATG	NA	NA	NA	NA	NA	NA	NA	NA	28668556	28707101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28668658_28707032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020779	chr6	+	144	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	226686	163891	226675	-163891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAGGTGCCCATCCACC	NA	NA	NA	NA	NA	NA	NA	NA	28707032	28724940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28707144_28724907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020780	chr6	+	168	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	244589	143525	244578	-143525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACCTTCCTGCTGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	28724935	28745306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28724981_28745183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020781	chr6	+	145	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	264863	92975	264852	-92975	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGGGCTTGGTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	28745209	28795856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28745326_28795827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020782	chr6	+	157	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	315492	13914	315481	-13914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGGGCTAACCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	28795838	28874917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28795938_28874859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020783	chr6	+	214	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	394594	8530	394583	-8530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGCACTTCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	28874940	28880301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28875049_28880195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020784	chr6	+	143	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	399938	5485	399927	-5485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGCATTGCCAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	28880284	28883346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28880338_28883256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020785	chr6	+	139	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	402924	4616	402913	-4616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGCCAAAGTGCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	28883270	28884215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28883381_28884186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020786	chr6	+	158	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	403839	3790	403828	-3790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTCATCCAGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	28884185	28885041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28884257_28884954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020787	chr6	+	162	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	404643	2336	404632	-2336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAGCTGCCCCCATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	28884989	28886495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28885069_28886412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020788	chr6	+	176	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	406137	711	406126	-711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGAGTTCTTGCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	28886483	28888120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28886617_28888077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020789	chr6	+	148	2	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	407730	496	407719	-496	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTCCCGCTGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	28888076	28888335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28888123_28888233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020790	chr6	+	136	1	ISM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	408349	0	408338	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGAGCCAGAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	28888695	28888831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_28888700_28888800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020791	chr6	-	1051	1	Genic_Genomic	ENSMUSG00000029701.16	novel	NA	NA	NA	NA	40383	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	29124622	29123571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_29123600_29124600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020792	chr6	-	683	1	ISM	ENSMUSG00000003500.14	ENST00000338791.11	2649	15	15178	3	8149	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	29201118	29200435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29200400_29201100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020793	chr6	+	524	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	34	424	34	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAGAGCCTATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	29272658	29275021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_29272810_29274648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020794	chr6	+	473	1	Genic_Genomic	ENSMUSG00000043421.9	novel	NA	NA	NA	NA	2349	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCCTGTTGACATGC	NA	NA	NA	NA	NA	NA	NA	NA	29274973	29275446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_29275000_29275400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020795	chr6	+	1411	4	ISM	ENSMUSG00000029767.17	ENST00000535011.6	3064	6	13258	1249	13208	-709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACATTGAAAGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29361325	29375419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29361487_29366038_29366206_29366915_29366977_29374397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020796	chr6	+	1988	4	ISM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	18002	90	18002	-90	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCATATCTGAACCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	29366119	29376038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29366206_29366915_29366977_29372469_29372670_29374397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020797	chr6	+	1667	1	ISM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	26903	0	26890	0	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTCTTTTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	29375007	29376674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29375000_29376700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020798	chr6	+	468	2	ISM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	43	27503	43	-27421	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCTTCAGGGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	29397353	29399435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29397586_29399199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020799	chr6	+	469	3	ISM	ENSMUSG00000029769.17	ENSMUST00000181464.8	3444	16	345	20863	345	-20772	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCGAGGGGACTATGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	29399269	29406084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29399449_29399533_29399609_29405869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020800	chr6	+	489	3	ISM	ENSMUSG00000029769.17	ENSMUST00000154619.5	3356	15	3115	16615	3115	-16615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCGACAGAGAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	29405982	29410241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29406191_29409223_29409336_29410072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020801	chr6	+	472	3	ISM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	12768	14405	7211	-14323	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGGAAGGCCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	29410078	29412533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29410242_29411246_29411385_29412362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020802	chr6	+	360	2	ISM	ENSMUSG00000029769.17	ENSMUST00000154619.5	3356	15	9492	13770	9492	-13770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGTACTTCAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	29412359	29413086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29412534_29412900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020803	chr6	+	295	2	ISM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	15588	4842	10031	-4760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGTATTGCTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	29412898	29422096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29413087_29421989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020804	chr6	+	331	2	ISM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	24676	94	19119	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGCCACTCAGACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	29421986	29426844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29422097_29426623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020805	chr6	+	232	1	ISM	ENSMUSG00000029769.17	ENSMUST00000115275.8	3279	16	30078	14	23839	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAATTACACGAGACATT	NA	NA	NA	NA	NA	NA	NA	NA	29426706	29426938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29426700_29426900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020806	chr6	+	710	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	-6	-1	-6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTACTGGTATGGATACGT	NA	NA	NA	NA	NA	NA	NA	NA	29467710	29470512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_29467974_29470065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020807	chr6	+	521	2	ISM	ENSMUSG00000004285.13	ENSMUST00000149646.3	806	3	998	86	998	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCCCAACTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	29469064	29470425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_29469226_29470065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020808	chr6	+	447	1	Genic_Genomic	ENSMUSG00000004285.13	novel	NA	NA	NA	NA	1999	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTACTGGTATGGATACGT	NA	NA	NA	NA	NA	NA	NA	NA	29470065	29470512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_29470100_29470500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020809	chr6	-	164	1	ISM	ENSMUSG00000012535.15	ENSMUST00000115251.8	3989	23	68617	0	68609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	29540989	29540825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29540800_29541000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020810	chr6	-	162	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	57671	14	57671	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCATCCAGGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	29551927	29543274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29543360_29551850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020811	chr6	-	155	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	54689	8664	54689	-8664	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGAGACCACAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	29554909	29551924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29551964_29554793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020812	chr6	-	791	7	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	46663	11560	46663	-11560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGATCATGCAGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29562935	29554820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020813	chr6	-	206	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	43806	21925	43806	-21925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGCATTGAAAAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	29565792	29565185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29565262_29565662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020814	chr6	-	181	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	40629	22530	40629	-22530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATTCATAACATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	29568969	29565790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29565855_29568852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020815	chr6	-	160	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	36932	27788	36932	-27788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGTGGATCCGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	29572666	29571048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29571127_29572584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020816	chr6	-	170	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	30994	31864	30994	-31864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCGACTAGGAGAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	29578604	29575124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29575152_29578461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020817	chr6	-	169	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	27344	36356	27344	-36356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACTAACTTGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	29582254	29579616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29579696_29582164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020818	chr6	-	153	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	21500	42857	21500	-42857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCGGATTGGGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	29588098	29586117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29586194_29588021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020819	chr6	-	167	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	20479	44760	20479	-44760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCATTTGTAATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	29589119	29588020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29588096_29589027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020820	chr6	-	239	2	ISM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	117	45846	117	-45846	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGCTTCTTTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	29609481	29589106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_29589229_29609364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020821	chr6	+	733	5	ISM	ENSMUSG00000058440.15	ENSMUST00000004761.13	1589	10	63	14219	44	-14219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCTCAGTCCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	30089956	30115172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020822	chr6	+	542	4	ISM	ENSMUSG00000058440.15	ENSMUST00000004761.13	1589	10	25115	10364	25096	-10364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCACTGGCAGAAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	30115008	30119027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_30115171_30116094_30116293_30117054_30117157_30118947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020823	chr6	+	814	3	ISM	ENSMUSG00000058440.15	ENSMUST00000167972.9	1541	10	29095	-408	29076	408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTGGGAACAAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	30118988	30152084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_30119106_30126233_30126359_30151512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020824	chr6	+	812	3	ISM	ENSMUSG00000058440.15	ENST00000353868.5	2888	12	36317	1319	36317	-378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCACCTGGTTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	30126229	30152139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_30126359_30140214_30140271_30151512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020825	chr6	+	1237	2	ISM	ENSMUSG00000058440.15	ENST00000353868.5	2888	12	61841	-4	61841	4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30151753	30153462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_30152384_30152855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020826	chr6	+	582	1	ISM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	103957	932	62031	3	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTACAAACTGAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	30151943	30152525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_30151900_30152500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020827	chr6	+	614	1	Genic_Genomic	ENSMUSG00000058440.15	novel	NA	NA	NA	NA	62936	4	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCCCTCTCTCTAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30152848	30153462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_30152800_30153500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020828	chr6	-	928	1	ISM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	92323	0	92306	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAACTTGATCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	30212215	30211287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30211300_30212200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020829	chr6	-	1038	2	ISM	ENSMUSG00000039159.17	ENSMUST00000094543.3	975	5	82725	-685	82725	685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTAGCACGGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	30221796	30214174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30215083_30221666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020830	chr6	-	1024	4	ISM	ENSMUSG00000039130.19	ENSMUST00000152391.9	1673	10	17516	2	17516	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCTGCTGCTAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	30373485	30366384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020831	chr6	-	1041	1	ISM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	27515	0	27447	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGTGAAATCATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	30482267	30481226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30481200_30482300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020832	chr6	-	1208	3	ISM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	20325	-462	20322	462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAACGCCCGGCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	30489392	30481951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30482985_30487373_30487448_30489291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020833	chr6	-	1200	1	ISM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	38147	946	38074	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCACTTTAGGAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	30655601	30654401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30654400_30655600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020834	chr6	-	1595	5	ISM	ENSMUSG00000029790.17	ENST00000676243.1	2447	11	34828	347	34766	-347	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCTTGCTTAAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	30658909	30654800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30655850_30656477_30656694_30657287_30657412_30658355_30658424_30658771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020835	chr6	-	897	5	ISM	ENSMUSG00000029790.17	ENST00000675962.1	1161	9	32693	-3	32660	3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTTTCTTTTAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	30661015	30655434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30655850_30657296_30657412_30658355_30658424_30658771_30658924_30660868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020836	chr6	-	482	3	ISM	ENSMUSG00000029790.17	ENST00000675563.1	1122	10	36319	0	36264	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTGTTTACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	30657411	30655698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30655850_30656477_30656694_30657296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020837	chr6	-	640	5	ISM	ENSMUSG00000029790.17	ENST00000343969.10	957	10	32695	0	32662	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTGTTTACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	30661013	30655698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30655850_30657287_30657412_30658355_30658424_30658771_30658924_30660868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020838	chr6	-	489	4	ISM	ENSMUSG00000029790.17	ENST00000675563.1	1122	10	34870	778	34815	-778	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGACTCTGACCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	30658860	30656476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30656694_30657296_30657412_30658355_30658424_30658771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020839	chr6	-	441	4	ISM	ENSMUSG00000029790.17	ENST00000675935.1	1229	11	32801	1596	32694	-1596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAAGTTGCAGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30660981	30657294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30657412_30658355_30658424_30658771_30658915_30660868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020840	chr6	-	483	5	ISM	ENSMUSG00000029790.17	ENST00000343969.10	957	10	27372	1666	27339	-1666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCAGCCAGGCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30666336	30657364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020841	chr6	-	486	5	ISM	ENSMUSG00000029790.17	ENST00000343969.10	957	10	26267	2668	26234	-2668	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGAGTACGTATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30667441	30658366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020842	chr6	-	478	5	ISM	ENSMUSG00000029790.17	ENST00000343969.10	957	10	22338	3073	22305	-3073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAGAAGGGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	30671370	30658771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020843	chr6	-	423	2	ISM	ENSMUSG00000029790.17	ENSMUST00000115130.3	485	3	13504	0	13480	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTATTCCAGACATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	30680195	30679086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_30679444_30680129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020844	chr6	+	1238	4	ISM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	7040	408	7037	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTACTGTTACTGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	30745088	30748053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_30745183_30745828_30745906_30746260_30746325_30747050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020845	chr6	+	1030	1	ISM	ENSMUSG00000051855.16	ENSMUST00000124665.3	2665	13	9381	2	9381	1	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCCGGCTTCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	30747432	30748462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_30747400_30748500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020846	chr6	-	512	2	ISM	ENSMUSG00000044471.13	ENST00000643452.1	1545	3	1958	0	-41	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCAGGCAGGGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	31195450	31158014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_31158085_31195008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020847	chr6	-	742	2	FSM	ENSMUSG00000044471.13	ENSMUST00000230209.2	1490	2	62	686	47	-686	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTGGTGACTGCAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	31197361	31195694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_31196071_31196995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020848	chr6	+	532	3	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	69424	38760	69424	-38760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGTAAGAATATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31445093	31454986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_31445279_31451233_31451456_31454861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020849	chr6	+	502	1	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	117575	0	117575	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTTGCCAAAATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	31493244	31493746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_31493200_31493700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020850	chr6	-	549	4	ISM	ENSMUSG00000053768.14	ENST00000448878.6	1009	8	167793	-6	167793	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAAAAGAGGAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	32869311	32769604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020851	chr6	-	721	1	NIC	ENSMUSG00000053768.14	novel	1550	8	NA	NA	208006	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAATTATTAGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32829098	32828377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_32828400_32829100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020852	chr6	-	754	2	ISM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	167856	89	167808	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAGATTTAGTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	32869296	32828466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_32829151_32869226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020853	chr6	+	1343	1	ISM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	723552	0	723505	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGTATGTTGTTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	33949571	33950914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_33949600_33950900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020854	chr6	-	911	7	ISM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	6528	0	6528	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34287885	34280868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020855	chr6	+	165	2	ISM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	159	18216	159	-18216	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGAGAACCGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34453300	34464332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_34453358_34464224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020856	chr6	+	120	2	ISM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	11692	1275	11692	-1275	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAACCTGCGTGCCGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	34464833	34481273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_34464886_34481205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020857	chr6	+	113	1	ISM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	29294	0	29294	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTCTAAATCATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34482435	34482548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_34482400_34482500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020858	chr6	+	475	2	ISM	ENSMUSG00000029761.17	ENSMUST00000031775.13	2142	13	32172	27731	32172	-27731	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAGGAGGAGCAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	34718740	34722898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_34718871_34722553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020859	chr6	+	486	2	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	36177	21942	35985	-20163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGCAGAATGGAGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	34722553	34730466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_34722951_34730377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020860	chr6	+	488	3	ISM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	44038	17376	43846	-15597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCCTAAAGGCTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	34730414	34735032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_34730524_34732568_34732834_34734918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020861	chr6	+	1181	4	ISM	ENSMUSG00000029761.17	ENSMUST00000031775.13	2142	13	55376	-448	55376	448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTATTTAGTTTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	34741944	34751077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_34742029_34743037_34743134_34747982_34748064_34750157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020862	chr6	+	977	1	Genic_Genomic	ENSMUSG00000029761.17	novel	NA	NA	NA	NA	64864	1	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGTGCATTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	34751432	34752409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_34751400_34752400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020863	chr6	+	492	2	ISM	ENSMUSG00000038836.16	ENSMUST00000115014.8	805	4	2704	0	1490	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCAGATTATTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	34760527	34762579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_34760566_34762125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020864	chr6	+	457	1	NIC	ENSMUSG00000038836.16	novel	3734	20	NA	NA	3085	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCAGATTATTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	34762122	34762579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_34762100_34762600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020865	chr6	+	2436	2	FSM	ENSMUSG00000057137.10	ENSMUST00000074949.4	2614	2	4	174	4	-174	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCCTGAGCCAACCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	34840084	34851707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_34840276_34849462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020866	chr6	-	680	1	ISM	ENSMUSG00000046806.14	ENSMUST00000055097.11	3681	4	5503	68	5491	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCATAGTAAAACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	34849453	34848773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_34848800_34849500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020867	chr6	+	2273	1	Genic_Genomic	ENSMUSG00000057137.10	novel	NA	NA	NA	NA	9547	19	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGAAAGGTGAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	34849627	34851900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_34849600_34851900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020868	chr6	+	1927	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	6	588	6	-588	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGAGAGCATCCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	35229594	35239843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_35229718_35237344_35237399_35238093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020869	chr6	+	522	3	ISM	ENSMUSG00000073155.13	ENSMUST00000130875.8	690	4	258	83	258	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCACTGTCTAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	35229908	35238489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_35229981_35237344_35237399_35238093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020870	chr6	+	479	1	ISM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	8505	1859	8443	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCTGGTGAATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	35238093	35238572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_35238100_35238600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020871	chr6	+	1780	1	Genic_Genomic	ENSMUSG00000073155.13	novel	NA	NA	NA	NA	9002	1	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGCCACACTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	35238652	35240432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_35238700_35240400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020872	chr6	-	664	5	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	31718	-2	31718	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGACAGTTACCAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	35252673	35245760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251965_35252566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020873	chr6	-	1553	3	FSM	ENSMUSG00000047420.9	ENSMUST00000051176.9	1606	3	55	-2	55	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGGTTCCTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35303021	35289600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_35290805_35292227_35292329_35302773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020874	chr6	-	517	1	Genic_Genomic	ENSMUSG00000029840.9	novel	NA	NA	NA	NA	30469	3	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCTCATAGAAAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	35486354	35485837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_35485800_35486400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020875	chr6	-	694	3	ISM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	17090	2919	17090	-2919	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGTGGCTGCTGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	35499733	35488759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_35489253_35498834_35498919_35499616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020876	chr6	-	546	3	ISM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	3	12993	3	-12993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTCAATGTTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	35516820	35498833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_35498919_35499616_35499731_35516473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020877	chr6	-	1414	5	FSM	ENSMUSG00000029838.12	ENSMUST00000101534.5	1614	5	201	-1	160	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTGTGTACAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	36786954	36691862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_36692698_36718212_36718375_36720261_36720436_36721323_36721441_36786828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020878	chr6	+	577	5	ISM	ENSMUSG00000038641.13	ENST00000411726.6	717	7	14	8632	14	-8632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGACATACCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	37509475	37535469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_37509582_37512963_37513081_37527140_37527219_37534423_37534534_37535303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020879	chr6	+	593	6	ISM	ENSMUSG00000038641.13	ENST00000411726.6	717	7	3507	-1	3507	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAATTTCTTCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	37512968	37544102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_37513081_37527140_37527219_37534423_37534534_37535303_37535470_37541356_37541440_37544058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020880	chr6	+	744	1	FSM	ENSMUSG00000080242.6	ENSMUST00000122373.2	465	1	298	-577	298	577	mono-exon	FALSE	NA	NA	NA	NA	NA	505	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAAGCACCCTGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	37783318	37784062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_37783300_37784100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020881	chr6	+	753	1	ISM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	94733	0	65057	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37942478	37943231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_37942500_37943200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020882	chr6	-	2419	3	ISM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	42570	0	42570	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTATGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	38288638	38282220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_38284392_38288112_38288247_38288524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020883	chr6	-	592	2	ISM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	17990	17131	17660	-17131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGGGGCCATGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	38313548	38309733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_38310124_38313346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020884	chr6	+	474	1	FSM	ENSMUSG00000057696.5	ENSMUST00000119767.2	348	1	-40	-86	-40	86	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATTCTCCCAGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	38353701	38354175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_38353700_38354200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020885	chr6	+	480	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGTTTTTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	38511756	38516384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_38511946_38516093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020886	chr6	+	1356	4	NNC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	26946	-220	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATAATAGCACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38569551	38585959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_38569731_38570312_38570426_38580211_38580404_38585087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020887	chr6	+	1150	5	ISM	ENSMUSG00000029823.17	ENST00000541170.7	1350	10	26999	-352	26975	352	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTAAACACGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	38569580	38585773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020888	chr6	+	917	1	ISM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	56864	225	42658	1	mono-exon	FALSE	NA	NA	NA	NA	NA	291	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTCTGGATTTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	38585263	38586180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_38585300_38586200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020889	chr6	-	692	1	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	31248	0	31248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGACTGGAGTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	39064035	39063343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39063300_39064000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020890	chr6	-	744	2	ISM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	29226	633	29226	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCAGTCTCCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	39066057	39063976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39064575_39065911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020891	chr6	-	1882	1	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	64852	3433	64741	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTTAAAAACAAAATACTCA	NA	NA	NA	NA	NA	NA	NA	NA	39118871	39116989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39117000_39118900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020892	chr6	-	2203	3	ISM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	61164	1361	61164	-1361	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATCTGTAGATAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	39122448	39118350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39120240_39121225_39121494_39122402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020893	chr6	-	2608	7	FSM	ENSMUSG00000029922.16	ENST00000640520.1	1288	7	-14	-1306	-14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	39387100	39374737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381788_39382667_39382895_39387021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020894	chr6	-	804	2	FSM	ENSMUSG00000029922.16	ENST00000480552.5	799	2	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAAATGTCTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	39387150	39377683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_39378359_39387021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020895	chr6	-	678	1	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	8725	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAAATGTCTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	39378361	39377683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_39377700_39378400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020896	chr6	-	715	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	36	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCCGAATGCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	39397196	39382472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_39382895_39387021_39387151_39397032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020897	chr6	-	569	5	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	38690	-1	38690	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATACCTGTAAATGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	39465808	39457111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020898	chr6	-	635	5	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	30388	8599	30388	-8599	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTACCAGGTAAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	39474110	39465711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020899	chr6	-	600	5	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	20775	12843	20775	-12843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCAGCAATTTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	39483723	39469955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020900	chr6	-	1038	4	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	4322	16795	4322	-16795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATACATACTTTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	39500176	39473907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39474109_39483634_39483757_39485175_39485304_39499589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020901	chr6	-	637	2	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	5	43022	5	-43022	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCGTGAGCTGAAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	39504493	39500134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_39500694_39504415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020902	chr6	+	529	1	Genic_Genomic	ENSMUSG00000046947.13	novel	NA	NA	NA	NA	14278	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCCCCTTTTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	39565175	39565704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_39565200_39565700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020903	chr6	+	456	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGTTTCTGATGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	39569516	39576406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020904	chr6	+	297	2	ISM	ENSMUSG00000002416.14	ENSMUST00000135671.8	4371	4	5699	3783	5690	128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACCACGGAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	39575206	39576533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_39575296_39576325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020905	chr6	+	302	1	Genic_Genomic	ENSMUSG00000002416.14	novel	NA	NA	NA	NA	10500	2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCTATCTTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	39580016	39580318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_39580000_39580300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020906	chr6	-	754	1	Genic_Genomic	ENSMUSG00000029918.10	novel	NA	NA	NA	NA	3488	3	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACAGTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	39779488	39778734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_39778700_39779500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020907	chr6	-	1106	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTTTGAGACAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	39787921	39778737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_39779479_39782304_39782546_39787797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020908	chr6	-	167	1	FSM	ENSMUSG00000106936.2	ENSMUST00000202282.2	574	1	32	375	32	-375	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTGGACCTAAAGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	39805675	39805508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_39805500_39805700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020909	chr6	+	156	2	ISM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	69475	934	69475	-934	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGCAAATGCTGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	40371580	40372762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_40371633_40372658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020910	chr6	-	623	1	ISM	ENSMUSG00000037172.15	ENSMUST00000101492.10	6742	9	29201	4937	16890	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAAGTTCAAGGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	40383868	40383245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_40383200_40383900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020911	chr6	+	437	3	ISM	ENSMUSG00000037159.12	ENST00000529830.1	635	5	6	1111	6	-1111	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCATCTATATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	40432018	40438092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_40432183_40433833_40433953_40437938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020912	chr6	+	396	3	ISM	ENSMUSG00000037159.12	ENSMUST00000038907.9	2884	12	12259	5655	43	-1111	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCATCTATATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	40432055	40438092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_40432179_40433833_40433953_40437938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020913	chr6	+	384	3	ISM	ENSMUSG00000037159.12	ENST00000529830.1	635	5	1821	199	1821	-199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTCTATTCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	40433833	40439004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_40433953_40437938_40438090_40438890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020914	chr6	+	353	3	ISM	ENSMUSG00000037159.12	ENST00000529830.1	635	5	5925	-6	5925	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGAGACAGGGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	40437937	40439209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_40438090_40438890_40438999_40439116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020915	chr6	+	327	3	NNC	ENSMUSG00000037159.12	novel	635	5	NA	NA	5934	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATTAGGGAGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	40437946	40439203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_40438090_40438890_40438988_40439116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020916	chr6	+	881	4	ISM	ENSMUSG00000029911.15	ENST00000445848.2	404	5	1750	-586	1750	481	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTAGTTTTCCTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	40453346	40458410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_40453442_40453681_40453755_40454856_40454946_40457786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020917	chr6	+	695	1	Genic_Genomic	ENSMUSG00000029911.15	novel	NA	NA	NA	NA	9344	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTATTTTAAATAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	40460940	40461635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_40460900_40461600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020918	chr6	-	137	1	NIC	ENSMUSG00000029915.15	novel	3747	6	NA	NA	7164	2	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTTACAGAGCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	40555016	40554879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_40554900_40555000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020919	chr6	-	383	3	ISM	ENSMUSG00000029915.15	ENST00000551012.6	539	5	3305	-1	3305	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTTTACAGAGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	40558875	40554880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_40555015_40556306_40556414_40558733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020920	chr6	-	294	3	ISM	ENSMUSG00000029915.15	ENST00000551012.6	539	5	6	3851	6	-3839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCATTAGGATGCTATA	NA	NA	NA	NA	NA	NA	NA	NA	40562174	40558732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_40558871_40561299_40561365_40562083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020921	chr6	+	144	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	706	6347	706	-6347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTCTGGCCAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	41590285	41591089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41590353_41591012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020922	chr6	+	136	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	2152	4922	2152	-4922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCCCATGTCTCCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	41591731	41592514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41591776_41592422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020923	chr6	+	177	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	3503	3985	3503	-3985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGCCACAGCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	41593082	41593451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41593202_41593393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020924	chr6	+	152	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	4195	3157	4195	-3157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCACTGTACTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41593774	41594279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41593845_41594197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020925	chr6	+	149	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	4638	2822	4638	-2822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGAAGGGGAGAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	41594217	41594614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41594313_41594560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020926	chr6	+	131	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	4980	2579	4980	-2579	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGACCCTACATATATCAA	NA	NA	NA	NA	NA	NA	NA	NA	41594559	41594857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41594614_41594780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020927	chr6	+	192	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	5207	2357	5207	-2357	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGGGGGTGCTGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	41594786	41595079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41594901_41595001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020928	chr6	+	200	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	5548	1854	5548	-1854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTGCCTTTGTTCACCG	NA	NA	NA	NA	NA	NA	NA	NA	41595127	41595582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41595250_41595504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020929	chr6	+	192	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	6643	796	6643	-796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCGGCCTCATTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	41596222	41596640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41596315_41596540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020930	chr6	+	215	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	7035	485	7035	-485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACAACTTCTCCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41596614	41596951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41596735_41596856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020931	chr6	+	124	2	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	7402	214	7402	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTGGAAGTGTAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	41596981	41597222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_41597013_41597129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020932	chr6	+	1371	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	38	2540	-3	-2370	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGCAGTGAATGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	42326799	42332956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020933	chr6	+	1237	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	1143	1951	932	-1781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGACCTGTCGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	42327904	42333545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020934	chr6	+	1150	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	1456	1144	1245	-974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACAAGTGTGAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	42328217	42334352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020935	chr6	+	1663	6	ISM	ENSMUSG00000029860.17	ENSMUST00000203401.3	1954	10	1577	-171	1571	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTCCCCTTCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	42328543	42335497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020936	chr6	+	1249	5	NNC	ENSMUSG00000029860.17	novel	2301	9	NA	NA	5931	5	intron_retention	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCCCTTCACTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	42332903	42335501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_42332972_42333095_42333266_42333365_42333545_42334246_42334363_42334785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020937	chr6	+	545	3	ISM	ENSMUSG00000029860.17	ENSMUST00000164375.4	3188	11	7274	1081	7274	570	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGGTTGGCCCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	42334246	42336066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_42334368_42334785_42334920_42335776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020938	chr6	+	318	1	ISM	ENSMUSG00000029860.17	ENSMUST00000164375.4	3188	11	9857	0	9857	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAACACCAGAGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	42336829	42337147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_42336800_42337100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020939	chr6	-	1052	1	FSM	ENSMUSG00000090631.4	ENSMUST00000057251.8	1052	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTAAAGTTACTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	42464148	42463096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_42463100_42464100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020940	chr6	-	940	2	ISM	ENSMUSG00000036667.15	ENSMUST00000121083.8	3342	9	19652	-475	5985	475	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAATTGAAAAGAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	42650369	42646400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_42647258_42650286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020941	chr6	-	1635	2	ISM	ENSMUSG00000036667.15	ENSMUST00000045140.5	5256	8	6100	7392	6100	-5046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGGGTGGGAGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	42663893	42655354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_42656355_42663258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020942	chr6	-	814	4	FSM	ENSMUSG00000029736.16	ENST00000645489.1	832	4	23	-5	23	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTGAGTTTGGGCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	43283735	43281802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_43282104_43282437_43282733_43283212_43283344_43283648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020943	chr6	-	821	5	FSM	ENSMUSG00000029735.18	ENST00000538212.6	821	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCTAACATCAGACTCCG	NA	NA	NA	NA	NA	NA	NA	NA	43500892	43323207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_43323498_43323586_43323835_43400554_43400667_43465808_43465905_43500817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020944	chr6	-	1579	1	FSM	ENSMUSG00000079575.4	ENSMUST00000182751.2	1441	1	-3	-135	-3	135	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTGCAGGTGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	46507731	46506152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_46506200_46507700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020945	chr6	-	1472	2	Genic_Genomic	ENSMUSG00000079575.4	novel	1441	1	NA	NA	-2	134	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGTGCAGGTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	46507730	46506153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_46506601_46506705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020946	chr6	+	297	1	NIC	ENSMUSG00000029686.16	novel	2999	22	NA	NA	139	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTTTTTCAGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	47461815	47462112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_47461800_47462100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020947	chr6	+	875	4	ISM	ENSMUSG00000029686.16	ENST00000666124.1	2774	20	38475	-92	38475	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATATTCCCATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47500151	47503073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_47500221_47500632_47500739_47501450_47501565_47502487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020948	chr6	-	136	2	ISM	ENSMUSG00000029687.17	ENSMUST00000092648.13	2115	18	45849	-4	45849	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTACCTCTTCCCCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	47508745	47507470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_47507536_47508674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020949	chr6	-	141	2	ISM	ENSMUSG00000029687.17	ENSMUST00000092648.13	2115	18	45620	1200	45620	-1200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGTAAAATACACAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	47508974	47508674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_47508760_47508918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020950	chr6	-	141	2	ISM	ENSMUSG00000029687.17	ENSMUST00000092648.13	2115	18	35	46065	35	-46065	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAGCAGCGGAGGATAC	NA	NA	NA	NA	NA	NA	NA	NA	47554559	47553539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_47553599_47554477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020951	chr6	-	1596	6	ISM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	9595	0	9595	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	47780769	47773074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020952	chr6	-	512	1	FSM	ENSMUSG00000094557.2	ENSMUST00000080603.4	333	1	-61	-118	-61	118	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACCACTACCACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	47792627	47792115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_47792100_47792600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020953	chr6	+	1285	1	ISM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	30740	0	30709	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAACAGGGATCATCACAT	NA	NA	NA	NA	NA	NA	NA	NA	47843337	47844622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_47843300_47844600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020954	chr6	+	1754	2	ISM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	8574	256	8574	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCCTGGGCGAGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	47905983	47909317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_47906065_47907644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020955	chr6	+	1675	1	ISM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	10489	0	10489	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACAGGGTGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	47907898	47909573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_47907900_47909600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020956	chr6	+	1105	4	ISM	ENSMUSG00000072653.15	ENST00000434415.6	1145	5	2046	-7	-54	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCATTTCCTCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	47922308	47929003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_47922686_47922770_47922897_47923595_47923686_47928491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020957	chr6	+	1388	1	ISM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	10523	0	10523	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGTCTTGCCTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	47940846	47942234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_47940800_47942200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020958	chr6	-	744	5	FSM	ENSMUSG00000057691.9	ENST00000461958.2	744	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACCTCGACGTGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	48063470	48058676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_48058703_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020959	chr6	-	551	3	FSM	ENSMUSG00000057691.9	ENST00000463567.5	545	3	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGGGAAAAGGTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	48063380	48059082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_48059202_48060239_48060540_48063248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020960	chr6	-	534	3	FSM	ENSMUSG00000057691.9	ENST00000513792.1	542	3	13	-5	13	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGGGAAAAGGTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	48060527	48059082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_48059202_48060026_48060154_48060239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020961	chr6	+	522	4	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	32	8115	32	-8115	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTGACCTAATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	48379846	48382324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48379945_48380311_48380432_48380924_48381075_48382170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020962	chr6	+	479	4	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	574	7073	574	-7073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGGCTGCCTTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	48380388	48383366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48380432_48380924_48381075_48382170_48382324_48383233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020963	chr6	+	538	4	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	1186	6493	1186	-6493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTACCTGGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	48381000	48383946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48381075_48382170_48382324_48383233_48383366_48383767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020964	chr6	+	460	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	3416	5682	3416	-5682	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGCCGCTCACTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	48383230	48384757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48383366_48383767_48383942_48384606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020965	chr6	+	524	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	3951	4779	3951	-4779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTGGGTTATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	48383765	48385660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48383942_48384606_48384757_48385462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020966	chr6	+	532	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	4786	4158	4786	-4158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCCTGGGTTAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	48384600	48386281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48384757_48385462_48385661_48386103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020967	chr6	+	547	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	5651	3610	5651	-3610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGTCCAGCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	48385465	48386829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48385661_48386103_48386278_48386651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020968	chr6	+	387	3	NNC	ENSMUSG00000042810.15	novel	2202	14	NA	NA	5782	-3635	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGGCAACGGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	48385596	48386804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_48385661_48386107_48386278_48386651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020969	chr6	+	511	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	6287	1706	6287	-1706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTATTTGTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	48386101	48388733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48386278_48386651_48386829_48388575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020970	chr6	+	680	4	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	6835	233	6835	-233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGCTGGCATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	48386649	48390206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48386829_48388575_48388729_48389207_48389361_48390011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020971	chr6	+	495	3	ISM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	9391	-2	9391	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGAGTCTCCCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	48389205	48390441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48389361_48390011_48390207_48390296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020972	chr6	+	522	2	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	366	6333	366	-6333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGCCTGGGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	48470433	48471123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48470838_48471005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020973	chr6	+	625	2	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	1969	3970	1969	-3970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTGAGAATGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	48472036	48473486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48472245_48473069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020974	chr6	+	782	3	ISM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	3115	2325	3115	-2325	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCAGGTACCCGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	48473182	48475131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48473607_48474246_48474518_48475044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020975	chr6	+	492	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	-66	-93	-66	93	mono-exon	FALSE	NA	NA	NA	NA	NA	1538	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTACAGAGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	48500385	48500877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_48500400_48500900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020976	chr6	+	1790	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCTCTGCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	48514547	48518735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020977	chr6	+	2078	1	Genic_Genomic	ENSMUSG00000073096.12	novel	NA	NA	NA	NA	13841	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGGTCATGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	48545579	48547657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_48545600_48547700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020978	chr6	+	289	2	ISM	ENSMUSG00000052751.17	ENSMUST00000135151.3	3057	3	962	2615	75	-2613	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCACTGTCGGAAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	48571795	48573400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48571911_48573226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020979	chr6	+	1468	1	ISM	ENSMUSG00000052751.17	ENSMUST00000118229.2	3138	3	3724	0	2828	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48574548	48576016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_48574500_48576000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020980	chr6	+	410	1	Genic_Genomic	ENSMUSG00000007216.7	novel	NA	NA	NA	NA	9646	8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTCAGCGCTAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	48599759	48600169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_48599800_48600200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020981	chr6	-	297	1	Genic_Genomic	ENSMUSG00000029810.16	novel	NA	NA	NA	NA	6873	7	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGGCTCTGCATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	48811041	48810744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_48810700_48811000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020982	chr6	-	288	2	ISM	ENSMUSG00000029810.16	ENSMUST00000164733.4	1648	7	6353	148	6353	33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACCTACTTCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	48811561	48810906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_48811074_48811440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020983	chr6	-	228	2	ISM	ENSMUSG00000029810.16	ENSMUST00000204073.3	986	7	5585	501	5428	-501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTTCGGGAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	48812486	48811440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_48811561_48812378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020984	chr6	-	244	3	ISM	ENSMUSG00000029810.16	ENSMUST00000204073.3	986	7	4802	1592	4645	-1592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGCAAACCAGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	48813269	48812531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_48812610_48812839_48812897_48813160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020985	chr6	+	482	1	Genic_Genomic	ENSMUSG00000029816.11	novel	NA	NA	NA	NA	21026	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTCTGAGTAATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	49034636	49035118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_49034600_49035100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020986	chr6	+	2824	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	2	-7	2	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTTAACTGTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	49050730	49063692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020987	chr6	-	135	1	ISM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	128352	1248	22425	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCAGGGGCTGGGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	49063539	49063404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_49063400_49063500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020988	chr6	-	216	2	NNC	ENSMUSG00000029814.11	novel	1762	8	NA	NA	21148	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTCAGGAGACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	49064816	49064277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_49064375_49064697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020989	chr6	-	225	2	NNC	ENSMUSG00000029814.11	novel	1762	8	NA	NA	20495	-422	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGGCTTCTAAACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	49065469	49064700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_49064816_49065359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020990	chr6	-	451	4	ISM	ENSMUSG00000029814.11	ENST00000619562.4	1762	8	4731	1958	4731	-1084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTACCCTAGCAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	49081233	49065362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_49065496_49067909_49067985_49071073_49071191_49081107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020991	chr6	-	416	4	ISM	ENSMUSG00000029814.11	ENST00000341855.4	964	8	121	6805	121	-6805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGATTAAGGTACTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	49191284	49071083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_49071191_49081107_49081234_49082503_49082633_49191230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020992	chr6	-	183	2	ISM	ENSMUSG00000029814.11	ENST00000619562.4	1762	8	1618	17717	1618	-16843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACAATTTGAGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	49084346	49081121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_49081234_49084275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020993	chr6	-	144	2	ISM	ENSMUSG00000029814.11	ENST00000619562.4	1762	8	40	20915	40	-20041	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCGAGCAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	49085924	49084319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_49084399_49085859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020994	chr6	-	505	1	Genic_Genomic	ENSMUSG00000029817.12	novel	NA	NA	NA	NA	19583	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTGTCTCTTTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	49221361	49220856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_49220900_49221400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020995	chr6	-	630	3	ISM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	18420	377	18400	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGAGCAGTTGAATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	49222544	49221238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_49221666_49221801_49221870_49222409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020996	chr6	-	502	4	ISM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	13040	1598	13040	-1594	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCGAGGCTATGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	49227904	49222455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_49222545_49223782_49223899_49225919_49226109_49227796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020997	chr6	-	594	4	ISM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	68	5056	68	-5052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTACAATTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	49240876	49225913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_49226109_49227796_49227957_49229315_49229450_49240771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020998	chr6	+	1698	2	ISM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	14731	352	14698	-348	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAATTGCTATATAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	49310938	49318164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_49311232_49316759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000020999	chr6	+	1532	1	ISM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	20777	0	20744	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTTATTTTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	49316984	49318516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_49317000_49318500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021000	chr6	+	483	3	ISM	ENSMUSG00000047115.16	ENST00000409653.5	673	5	1	6851	1	-6851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGGAAGCGTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	49344824	49355538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_49344908_49353037_49353229_49355329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021001	chr6	+	765	5	FSM	ENSMUSG00000047115.16	ENST00000344962.9	765	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTATTTGCGGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	49349499	49362389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_49349676_49353037_49353229_49355329_49355537_49359896_49360005_49362306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021002	chr6	-	204	1	ISM	ENSMUSG00000029821.16	ENSMUST00000101405.10	4383	9	61320	0	61320	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGTGTATGGTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	50177407	50177203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_50177200_50177400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021003	chr6	-	1083	3	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	42330	-2	42308	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTGGCTGTTCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	50196419	50184380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_50185187_50193329_50193404_50196216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021004	chr6	-	324	2	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	40651	11842	40629	-11842	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCAGGTATGGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	50198098	50196224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_50196419_50197968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021005	chr6	-	201	2	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	38868	13679	38846	-13679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGTTACCTGCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	50199881	50198061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_50198097_50199715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021006	chr6	-	247	2	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	34387	15355	34365	-15355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTACGAGTTGTAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	50204362	50199737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_50199881_50204258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021007	chr6	-	282	2	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	15733	21880	15711	-21880	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCTCGGCATGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	50223016	50206262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_50206438_50222909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021008	chr6	-	257	2	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	10317	38640	10295	-38640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCAAGCTGAACGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	50228432	50223022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_50223103_50228255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021009	chr6	-	2090	1	Genic_Genomic	ENSMUSG00000063694.6	novel	NA	NA	NA	NA	1891	5	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCTGTCCAGGAAAACGG	NA	NA	NA	NA	NA	NA	NA	NA	50541627	50539537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_50539500_50541600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021010	chr6	-	2346	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	8	769	8	-769	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGTAACCCAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	50543510	50540311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_50542366_50542471_50542649_50543395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021011	chr6	-	712	3	ISM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	5681	-2	5559	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGCACTGCTACAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	51441193	51437909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51438414_51440390_51440474_51441068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021012	chr6	-	939	1	NIC	ENSMUSG00000004980.17	novel	1647	10	NA	NA	7781	1	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTATAAATGCTAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	51438971	51438032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_51438000_51439000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021013	chr6	-	1135	3	ISM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	5309	1467	5236	169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTGCAAAGAGAAACACCT	NA	NA	NA	NA	NA	NA	NA	NA	51441516	51439570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51440474_51441068_51441192_51441407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021014	chr6	-	117	1	ISM	ENSMUSG00000004980.17	ENST00000356674.8	3904	11	7264	1706	6896	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	51439856	51439739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51439700_51439900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021015	chr6	-	823	4	ISM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	5223	0	5223	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	51441529	51439739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021016	chr6	-	146	2	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	4530	1370	4530	-1370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGGGGTAGCAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	51442222	51441109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51441192_51442158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021017	chr6	-	139	2	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	3548	2426	3548	-2426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGGTTAGTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	51443204	51442165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51442222_51443121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021018	chr6	-	173	2	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	3378	3382	3378	-3382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTTCTTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	51443374	51443121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51443203_51443282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021019	chr6	-	153	2	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	3208	3562	3208	-3562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGGAGTGGAAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	51443544	51443301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51443385_51443474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021020	chr6	-	165	2	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	2791	3857	2791	-3857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTTGAAGAGTATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	51443961	51443596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51443686_51443885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021021	chr6	-	196	2	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	2498	4187	2498	-4187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAGGGTAGTTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	51444254	51443926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51444033_51444164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021022	chr6	-	186	2	ISM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	7	4445	7	-4445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTCACAGACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	51446745	51444184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51444276_51446650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021023	chr6	+	1435	4	ISM	ENSMUSG00000029836.16	ENSMUST00000114445.8	1585	5	1148	83	1119	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGAATGTCATCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	51448793	51460601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_51448849_51452210_51452354_51458703_51458799_51459459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021024	chr6	+	1680	5	ISM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	1120	0	1120	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51448794	51460684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021025	chr6	+	1603	4	NNC	ENSMUSG00000029836.16	novel	1889	6	NA	NA	4556	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51452230	51460684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_51452354_51455417_51455581_51458703_51458796_51459459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021026	chr6	+	1142	1	Genic_Genomic	ENSMUSG00000029836.16	novel	NA	NA	NA	NA	11869	1	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGACTTTTTTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	51459543	51460685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_51459500_51460700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021027	chr6	+	205	2	ISM	ENSMUSG00000038301.16	ENSMUST00000114439.8	968	7	35778	751	35778	-751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCGGTGGAAGAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	51557281	51565301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_51557381_51565195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021028	chr6	+	1311	1	ISM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	65468	0	44845	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	51566348	51567659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_51566300_51567700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021029	chr6	-	1028	1	ISM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	154100	0	154066	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	51835429	51834401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_51834400_51835400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021030	chr6	-	2240	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	12	-1	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAAGCATCTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	52135285	52132568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52134070_52134546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021031	chr6	-	793	1	ISM	ENSMUSG00000079560.14	ENSMUST00000114434.9	2591	5	43258	3	31116	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGATCCGTGTCAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	52146837	52146044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52146000_52146800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021032	chr6	-	1097	2	ISM	ENSMUSG00000079560.14	ENST00000317201.7	2759	5	28292	1142	28292	-1142	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGGACCCCACACTTACA	NA	NA	NA	NA	NA	NA	NA	NA	52149661	52147186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52147723_52149100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021033	chr6	-	800	3	ISM	ENSMUSG00000079560.14	ENST00000317201.7	2759	5	12736	3202	12736	-3202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCAAAGTGCCAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	52165217	52149246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52149750_52160687_52160771_52165003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021034	chr6	-	883	3	FSM	ENSMUSG00000000942.11	ENST00000467897.2	881	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGACAACTTTGCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	52190294	52167103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52167610_52177816_52177919_52190019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021035	chr6	+	1053	2	FSM	ENSMUSG00000085696.9	ENST00000524304.1	1940	2	888	-1	888	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCTTTCCCCATCACTA	NA	NA	NA	NA	NA	NA	NA	NA	52188849	52190460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_52189468_52190025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021036	chr6	-	1400	1	Genic_Genomic	ENSMUSG00000038236.9	novel	NA	NA	NA	NA	1562	7	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGACTGCTTTATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	52192870	52191470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_52191500_52192900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021037	chr6	-	1822	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	25	162	25	-162	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAATTCTGTAGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	52194460	52191639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52193011_52194009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021038	chr6	-	740	1	Genic_Genomic	ENSMUSG00000038227.16	novel	NA	NA	NA	NA	2266	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTGTGCGGCTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	52200818	52200078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_52200100_52200800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021039	chr6	-	1252	2	FSM	ENSMUSG00000038227.16	ENSMUST00000048680.8	3226	2	1151	823	-30	198	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAGGAAAGAAAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	52203199	52200902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52201463_52202507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021040	chr6	-	646	3	FSM	ENSMUSG00000038227.16	ENSMUST00000114425.3	851	3	86	119	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGGGCTCATTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52203083	52201219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52201463_52202507_52202598_52202770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021041	chr6	-	239	1	ISM	ENSMUSG00000038227.16	ENSMUST00000048680.8	3226	2	2888	1144	1622	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTAGGGGCTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	52201462	52201223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52201200_52201500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021042	chr6	-	604	3	NNC	ENSMUSG00000038227.16	novel	851	3	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTTAGGGGCTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	52203052	52201223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_52201463_52202507_52202591_52202770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021043	chr6	-	1312	1	ISM	ENSMUSG00000000938.12	ENSMUST00000125581.2	2565	2	2431	0	2431	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTAATTTCACCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	52209488	52208176	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52208200_52209500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021044	chr6	-	2235	2	FSM	ENSMUSG00000000938.12	ENSMUST00000125581.2	2565	2	4	326	4	314	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTGGGGCAAGCAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52211915	52208502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52209761_52210938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021045	chr6	-	1274	2	FSM	ENSMUSG00000000938.12	ENST00000396344.4	1555	2	3	278	3	-193	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTCCCATTGTCGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	52217865	52209094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52209757_52217253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021046	chr6	-	674	2	NIC	ENSMUSG00000000938.12	novel	1555	2	NA	NA	363	-395	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTGGTGTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	52217471	52209296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_52209757_52217257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021047	chr6	-	2253	2	FSM	ENSMUSG00000038210.11	ENSMUST00000048026.10	2287	2	34	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTCAATACTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	52222756	52219085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52220573_52221990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021048	chr6	+	1821	5	FSM	ENSMUSG00000086427.9	ENSMUST00000134512.8	1839	5	24	-6	24	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATTCAGGTGCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52222246	52226755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_52222797_52222964_52223181_52223294_52223512_52223642_52223789_52226063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021049	chr6	+	928	4	ISM	ENSMUSG00000086427.9	ENST00000522863.2	1549	5	742	47	742	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCGTTTTCCCGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	52222964	52226422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_52223181_52223294_52223512_52223652_52223789_52226063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021050	chr6	+	411	1	FSM	ENSMUSG00002076652.1	ENSMUST00020181910.1	177	1	-220	-14	-220	14	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCGAGGCTCGCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	52226058	52226469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_52226100_52226500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021051	chr6	-	356	1	FSM	ENSMUSG00000059159.7	ENSMUST00000118230.2	213	1	-52	-91	-52	91	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGGTGGTGGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	52323979	52323623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_52323600_52324000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021052	chr6	-	208	1	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	93954	0	93954	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGCTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52523420	52523212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52523200_52523400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021053	chr6	-	317	2	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	91407	686	91407	-686	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTCTGACTGCGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	52525967	52523898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52524048_52525799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021054	chr6	-	370	3	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	82476	2586	82476	-2586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAACTGCAGAGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	52534898	52525798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52525957_52533422_52533500_52534763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021055	chr6	-	370	3	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	17425	11551	17425	-11551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGTTGCCGCACAATAA	NA	NA	NA	NA	NA	NA	NA	NA	52599949	52534763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52534898_52596961_52597084_52599835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021056	chr6	-	188	2	NNC	ENSMUSG00000029776.12	novel	1825	8	NA	NA	20291	-11616	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTTGCTGGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	52597083	52534828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_52534898_52596964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021057	chr6	-	273	2	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	10039	76622	10039	-76622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTTCTCAAGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	52607335	52599834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52599946_52607173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021058	chr6	-	341	2	ISM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	39	83971	39	-83971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAACAGGTAAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	52617335	52607183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_52607335_52617145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021059	chr6	+	1259	4	ISM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	43875	0	43875	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	52734588	52743765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_52734714_52735197_52735341_52742005_52742089_52742857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021060	chr6	+	606	2	ISM	ENSMUSG00000004633.18	ENSMUST00000204921.3	861	6	25200	-391	25200	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGATGTATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	54275092	54277620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_54275136_54277057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021061	chr6	+	588	1	ISM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	260561	0	27226	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTCCCCTTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	54277118	54277706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_54277100_54277700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021062	chr6	-	2994	1	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	57606	0	57606	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGAGCCTCTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	54485868	54482874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_54482900_54485900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021063	chr6	-	3447	4	ISM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	43602	501	43602	-501	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGCAGCCAGGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	54499872	54483375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021064	chr6	-	631	1	ISM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	14943	0	14943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTACATGTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	54555219	54554588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_54554600_54555200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021065	chr6	-	772	3	ISM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	3753	1591	3753	-633	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTGTCTTCTCAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	54566409	54556179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_54556672_54562787_54562916_54566257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021066	chr6	+	589	2	FSM	ENSMUSG00000038065.14	ENST00000409688.1	735	2	5	141	0	-141	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTCGAGTTTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	54658738	54676375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_54658917_54675964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021067	chr6	+	463	1	ISM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	17445	4320	17315	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTACCTTTTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54676053	54676516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_54676100_54676500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021068	chr6	-	387	3	FSM	ENSMUSG00000002797.10	ENST00000514941.1	377	3	-3	-7	-3	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCATAACAGACTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	54969795	54962851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_54962987_54963817_54963954_54969679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021069	chr6	-	373	3	NNC	ENSMUSG00000002797.10	novel	377	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAACTGTCATAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	54969792	54962858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_54962987_54963817_54963946_54969675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021070	chr6	-	364	3	NNC	ENSMUSG00000002797.10	novel	377	3	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAACTGTCATAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	54969780	54962858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_54962987_54963817_54963949_54969675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021071	chr6	-	380	3	NNC	ENSMUSG00000002797.10	novel	377	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAACTGTCATAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	54969791	54962858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_54962987_54963817_54963954_54969675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021072	chr6	+	2580	4	FSM	ENSMUSG00000004655.6	ENSMUST00000004774.4	2627	4	47	0	47	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGGCCTCCTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55313463	55325540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_55313860_55322390_55322556_55322797_55322879_55323602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021073	chr6	-	201	1	NIC	ENSMUSG00000004347.18	novel	3907	19	NA	NA	289931	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAGCACCTACCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	56049365	56049164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_56049200_56049400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021074	chr6	-	266	2	ISM	ENSMUSG00000004347.18	ENST00000321453.12	2248	19	271010	0	270878	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTAGCACCTACCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	56068418	56049165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56049361_56068347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021075	chr6	-	370	3	ISM	ENSMUSG00000004347.18	ENSMUST00000114327.9	6821	19	235438	13520	235230	9083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGTAAATGACATTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	56104066	56068347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56068417_56099976_56100055_56103843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021076	chr6	-	519	3	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	222854	20688	222799	-20688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGAGGGGCTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	56116497	56103844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56104066_56114329_56114506_56116375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021077	chr6	-	267	3	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	220191	31285	220136	-31285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTCCCATCAACAATTC	NA	NA	NA	NA	NA	NA	NA	NA	56119160	56114441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56114506_56116375_56116497_56119078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021078	chr6	-	305	3	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	211649	33239	211594	-33239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGGCAGAGGAGATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	56127702	56116395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56116497_56119078_56119161_56127580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021079	chr6	-	262	3	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	210974	35964	210919	-35964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGACAGAAAGTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	56128377	56119120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56119161_56127580_56127702_56128276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021080	chr6	-	354	3	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	205214	44423	205159	-44423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTGTCTCCTGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	56134137	56127579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56127702_56128276_56128379_56134007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021081	chr6	-	305	3	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	203339	45147	203284	-45147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACAGCCCTGCAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	56136012	56128303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56128379_56134007_56134137_56135911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021082	chr6	-	306	3	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	188617	50922	188562	-50922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTACCGCCTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	56150734	56134078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56134137_56135911_56136013_56150587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021083	chr6	-	367	3	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	187336	52753	187281	-52753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTTGAAATGTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	56152015	56135909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56136013_56150587_56150729_56151892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021084	chr6	-	407	4	ISM	ENSMUSG00000004347.18	ENSMUST00000164037.3	3068	16	182113	67534	182058	-67534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTGGGTTACAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	56157238	56150690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56150729_56151892_56152010_56156077_56156145_56157053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021085	chr6	-	432	4	ISM	ENSMUSG00000004347.18	ENSMUST00000164752.8	3449	18	958	74351	459	-73897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGGTGAAACTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	56338837	56157053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56157237_56158668_56158783_56322110_56322138_56338729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021086	chr6	-	180	2	ISM	ENSMUSG00000004347.18	ENST00000321453.12	2248	19	24	289563	24	-255572	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACACCTCCCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	56339404	56338728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56338833_56339328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021087	chr6	-	264	3	ISM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	1659	64	1650	-64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTTGTTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	56680018	56678111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56678275_56679080_56679154_56679990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021088	chr6	+	696	3	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	9	28606	9	-28606	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCCACTGTTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	56809052	56827737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_56809413_56826622_56826769_56827547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021089	chr6	+	482	3	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	17576	27854	17576	-27854	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTAAGTCCTTCTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	56826619	56828489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_56826769_56827547_56827738_56828346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021090	chr6	+	673	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	18504	18556	18504	-18556	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTACCCGCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	56827547	56837787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_56827738_56828346_56828493_56833217_56833408_56837640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021091	chr6	+	403	3	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	19294	18645	19294	-18645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATGAAGGCTTACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	56828337	56837698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_56828493_56833217_56833408_56837640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021092	chr6	+	526	3	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	24173	10450	24173	-10450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGTATCTGGGAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	56833216	56845893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_56833408_56837640_56837787_56845704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021093	chr6	+	903	4	ISM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	36659	921	36659	-921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCAATTGGTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	56845702	56855422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_56845892_56850351_56850498_56852653_56852818_56855018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021094	chr6	+	428	1	Genic_Genomic	ENSMUSG00000029781.8	novel	NA	NA	NA	NA	46873	1	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGCTTTATGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	56855916	56856344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_56855900_56856300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021095	chr6	-	571	1	Genic_Genomic	ENSMUSG00000029780.15	novel	NA	NA	NA	NA	18917	1	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTGTCCAGATCATATT	NA	NA	NA	NA	NA	NA	NA	NA	56859954	56859383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_56859400_56860000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021096	chr6	-	902	3	ISM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	17021	115	17021	-115	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACATTTGCCAGGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	56861850	56859499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_56860044_56860659_56860861_56861693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021097	chr6	-	1098	5	FSM	ENSMUSG00000037826.6	ENST00000295908.11	1098	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGAAGGCCACCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	57502212	57487639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_57487835_57491958_57492104_57492577_57492744_57499733_57499835_57501721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021098	chr6	-	1278	1	FSM	ENSMUSG00000104204.2	ENSMUST00000194579.2	2842	1	-273	1837	-273	-1837	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCATTCTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	57664838	57663560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_57663600_57664800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021099	chr6	-	1284	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	183	2106	183	-2106	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTTCCCCTAAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	57668880	57665666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_57666864_57668793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021100	chr6	-	1864	1	Genic_Genomic	ENSMUSG00000037788.15	novel	NA	NA	NA	NA	95467	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTGCTCCTGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	57706654	57704790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_57704800_57706700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021101	chr6	-	1408	1	Genic_Genomic	ENSMUSG00000037788.15	novel	NA	NA	NA	NA	71465	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGATTTTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	57730656	57729248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_57729200_57730700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021102	chr6	-	1589	3	ISM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	50398	1011	50375	-1011	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATATGTAGTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	57751746	57730260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_57731662_57739419_57739557_57751695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021103	chr6	+	493	1	FSM	ENSMUSG00000071419.8	ENSMUST00000121788.2	438	1	-21	-34	-21	34	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGGGGGGGAAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	57994469	57994962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_57994500_57995000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021104	chr6	+	2567	3	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	48990	-2118	48990	-1047	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTTTTAAAGTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	58666538	58671614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_58666630_58667515_58667605_58669227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021105	chr6	+	2636	1	Genic_Genomic	ENSMUSG00000029802.14	novel	NA	NA	NA	NA	52478	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTCTGTTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	58670026	58672662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_58670000_58672700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021106	chr6	-	291	1	ISM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	91014	1155	69970	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGAGGGTTATGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58910520	58910229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_58910200_58910500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021107	chr6	-	2261	4	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	63345	0	63345	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGAGGGTTATGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58917145	58910229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021108	chr6	-	329	3	ISM	ENSMUSG00000037709.14	ENSMUST00000173193.2	1998	17	78271	3711	57436	-3711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTATGTGTCTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	58923054	58916280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_58916383_58917105_58917303_58923024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021109	chr6	-	296	2	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	48208	20964	48208	-18624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAGGTGGGATGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	58932282	58931193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_58931408_58932200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021110	chr6	+	806	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	137	2064	137	-2064	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCGTTGTCATAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	59185991	59186954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_59186167_59186323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021111	chr6	-	1023	4	FSM	ENSMUSG00000025889.14	ENST00000618500.4	1017	4	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGAATGAAAAGTTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	60804592	60708477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60804464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021112	chr6	-	543	1	Genic_Genomic	ENSMUSG00000025889.14	novel	NA	NA	NA	NA	95562	2	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGGAATGAAAAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	60709023	60708480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_60708500_60709000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021113	chr6	-	976	4	FSM	ENSMUSG00000025889.14	ENST00000345009.8	975	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACTGGAATGAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	60804592	60708482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_60709146_60792600_60792744_60795307_60795350_60804464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021114	chr6	-	1005	4	NNC	ENSMUSG00000025889.14	novel	1017	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACTGGAATGAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	60804583	60708482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_60709146_60710087_60710172_60792600_60792744_60804468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021115	chr6	-	971	4	NNC	ENSMUSG00000025889.14	novel	975	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACTGGAATGAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	60804591	60708482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_60709146_60792600_60792744_60795307_60795350_60804468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021116	chr6	-	256	2	NNC	ENSMUSG00000025889.14	novel	265	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCCTGTTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	60804583	60792599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_60792733_60804460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021117	chr6	-	184	2	NNC	ENSMUSG00000025889.14	novel	265	2	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCCTGTTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	60804512	60792599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_60792736_60804464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021118	chr6	-	263	2	NNC	ENSMUSG00000025889.14	novel	265	2	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCCTGTTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	60804579	60792599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_60792744_60804460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021119	chr6	-	150	1	NIC	ENSMUSG00000025889.14	novel	975	4	NA	NA	11836	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTGCCTGTTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	60792749	60792599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_60792600_60792700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021120	chr6	-	233	2	NNC	ENSMUSG00000025889.14	novel	975	4	NA	NA	27	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGCTGCCTGTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	60804558	60792600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_60792736_60804460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021121	chr6	+	342	2	ISM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	557	79	557	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACCTAACTTTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	65020376	65021108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_65020430_65020819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021122	chr6	+	311	1	ISM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	1057	0	1057	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGCAGAGCATTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	65020876	65021187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_65020900_65021200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021123	chr6	+	600	5	ISM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	626	6689	548	-460	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTTACAACCACAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	66512999	66517515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021124	chr6	+	1333	2	ISM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	3496	-7	3496	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCTTTAAAAGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	66515947	66517982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_66516053_66516754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021125	chr6	+	1228	1	NIC	ENSMUSG00000029910.15	novel	7557	6	NA	NA	4303	7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCTTTAAAAGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	66516754	66517982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_66516800_66518000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021126	chr6	+	576	1	ISM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	11255	0	11177	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATGTGTATGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66523628	66524204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_66523600_66524200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021127	chr6	+	361	1	FSM	ENSMUSG00000107591.2	ENSMUST00000203829.2	457	1	98	-2	98	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGGCCTTTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	66688772	66689133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_66688800_66689100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021128	chr6	+	2132	2	NIC	ENSMUSG00000036402.14	novel	739	5	NA	NA	119175	385	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAGTTTATTACAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	66992707	66996455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_66992832_66994447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021129	chr6	+	292	1	ISM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	122402	2260	122250	4	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGCTCTGAGCGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	66995782	66996074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_66995800_66996100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021130	chr6	+	2103	1	ISM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	122851	0	122699	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCTTTCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	66996231	66998334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_66996200_66998300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021131	chr6	-	1121	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	102	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTCTCAACGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67014288	67012079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021132	chr6	-	448	2	FSM	ENSMUSG00000036390.9	ENST00000648742.1	431	2	-2	-15	-2	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGGCAAAAGGGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	67014310	67012434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_67012757_67014184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021133	chr6	-	319	1	NIC	ENSMUSG00000036390.9	novel	1223	4	NA	NA	1475	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATCCAAGGCAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	67012760	67012441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_67012400_67012800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021134	chr6	+	285	1	FSM	ENSMUSG00000047905.11	ENSMUST00000120174.2	465	1	298	-118	298	118	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTTGTTTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	67182900	67183185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_67182900_67183200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021135	chr6	+	840	5	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	17	11372	17	-11075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGGTTTGTGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	67244011	67249923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021136	chr6	+	3844	6	ISM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	4909	-2810	4849	2810	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCATTAAATCCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	67248903	67264105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021137	chr6	-	1078	4	ISM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	44412	-1	23285	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAGGCTTGATACTAG	NA	NA	NA	NA	NA	NA	NA	NA	67293393	67269200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_67269721_67275891_67276030_67285941_67286143_67293174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021138	chr6	+	3301	1	Genic_Genomic	ENSMUSG00000036371.7	novel	NA	NA	NA	NA	27366	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGTTTATATTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	67271420	67274721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_67271400_67274700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021139	chr6	-	640	1	FSM	ENSMUSG00000051397.6	ENSMUST00000058178.6	1735	1	1096	-1	1096	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTTCTCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	67511684	67511044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_67511000_67511700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021140	chr6	+	316	1	FSM	ENSMUSG00000068396.10	ENSMUST00000121998.2	354	1	132	-94	132	94	mono-exon	FALSE	NA	NA	NA	NA	NA	713	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGAACAATGAAAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	71101725	71102041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_71101700_71102000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021141	chr6	-	566	3	ISM	ENSMUSG00000054474.16	ENST00000449349.5	884	5	2540	-1	2540	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGCGGTGGAAAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	71115788	71105655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_71105837_71111064_71111296_71115634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021142	chr6	-	403	2	NNC	ENSMUSG00000054474.16	novel	884	5	NA	NA	7035	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGCGGTGGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	71111293	71105656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_71105831_71111064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021143	chr6	-	787	4	ISM	ENSMUSG00000054474.16	ENST00000343544.8	1390	7	7163	0	7055	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGCGGTGGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	71111273	71105656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_71105837_71108508_71108758_71108858_71109008_71111064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021144	chr6	-	987	6	ISM	ENSMUSG00000054474.16	ENST00000496844.6	1267	7	1507	49	1399	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGGAGATGACTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	71116929	71105705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_71105837_71108631_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021145	chr6	-	446	3	NNC	ENSMUSG00000054474.16	novel	884	5	NA	NA	1400	-5538	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCGGGTCCTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	71116928	71111194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_71111296_71115634_71115788_71116736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021146	chr6	-	620	4	ISM	ENSMUSG00000054474.16	ENST00000343544.8	1390	7	41	5559	41	-5559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGCTTGAACTCCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	71118395	71111215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_71111296_71115634_71115788_71116732_71116928_71118203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021147	chr6	+	857	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	2	828	2	-827	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGAACGGCCCAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	71248662	71261475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_71248825_71259134_71259302_71260947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021148	chr6	+	593	1	ISM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	13050	0	2447	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTGTGTCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	71261710	71262303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_71261700_71262300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021149	chr6	+	623	5	ISM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	31	3795	31	-2387	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATGGAAGAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	71520811	71554768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021150	chr6	+	1085	5	FSM	ENSMUSG00000053119.12	ENST00000409225.2	1117	5	32	0	-20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATTGTAAATGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	71520880	71557155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_71521018_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021151	chr6	+	535	1	NIC	ENSMUSG00000053119.12	novel	2654	6	NA	NA	35721	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGTAAATGTCACATG	NA	NA	NA	NA	NA	NA	NA	NA	71556621	71557156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_71556600_71557200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021152	chr6	+	516	1	ISM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	37267	0	37147	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATATTATGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	71558047	71558563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_71558000_71558600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021153	chr6	-	2167	1	ISM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	8647	0	8647	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCTTTCTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	71792147	71789980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_71790000_71792100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021154	chr6	-	2471	3	ISM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	4949	1158	4949	-1158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71795845	71791138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_71793272_71794588_71794734_71795652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021155	chr6	+	1421	4	ISM	ENSMUSG00000052337.16	ENSMUST00000166938.8	2413	13	37167	-6	37167	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACTCTATCCCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	71845568	71852240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_71845788_71848410_71848543_71849777_71849908_71851300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021156	chr6	+	942	1	Genic_Genomic	ENSMUSG00000052337.16	novel	NA	NA	NA	NA	42899	1	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCTATCCCTTTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	71851300	71852242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_71851300_71852200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021157	chr6	+	1834	4	ISM	ENSMUSG00000056091.13	ENSMUST00000114112.4	2439	7	44515	-1	13876	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGTTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	72119121	72131556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72119468_72124052_72124240_72126002_72126162_72130414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021158	chr6	+	1088	3	ISM	ENSMUSG00000056091.13	ENST00000639119.1	1329	5	13881	0	13881	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACACGTACTCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	72119126	72130974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72119468_72124052_72124240_72130414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021159	chr6	+	691	1	ISM	ENSMUSG00000056091.13	ENSMUST00000069994.11	2258	7	56289	0	25619	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTGTTTGTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72130864	72131555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72130900_72131600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021160	chr6	-	431	1	ISM	ENSMUSG00000037621.9	ENSMUST00000042646.8	2355	3	28970	0	28970	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCGTGTGTGGTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	72183591	72183160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72183200_72183600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021161	chr6	-	1018	3	FSM	ENSMUSG00000037621.9	ENSMUST00000042646.8	2355	3	822	515	822	-515	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTTCGAGACAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	72211739	72183675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72184140_72200725_72200918_72211377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021162	chr6	-	785	3	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	21588	-387	21588	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGTGGGTGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	72298374	72295660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72296223_72296722_72296810_72298238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021163	chr6	-	662	5	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	15633	0	13462	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCACCATGAAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72306500	72296047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72296223_72296722_72296810_72302628_72302772_72305500_72305690_72306432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021164	chr6	-	567	5	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	11961	675	9790	-675	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGTGGGCCAACGCAG	NA	NA	NA	NA	NA	NA	NA	NA	72310172	72296722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72296810_72302628_72302772_72305500_72305690_72306432_72306501_72310092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021165	chr6	-	858	6	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	5124	6581	5124	-6581	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATCACCCTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	72314838	72302628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021166	chr6	-	606	4	ISM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	5099	17190	2928	-17190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAGTCACCCTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	72317034	72313237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72313469_72314684_72314838_72315375_72315513_72316949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021167	chr6	+	930	3	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	2860	134	2860	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAGGCCCACCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	72335289	72336611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72335419_72335561_72335740_72335988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021168	chr6	+	666	1	Genic_Genomic	ENSMUSG00000055912.9	novel	NA	NA	NA	NA	3651	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGTGTTCTGGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	72336080	72336746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_72336100_72336700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021169	chr6	-	1432	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTGGTTCTGCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	72339412	72336695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021170	chr6	-	625	3	FSM	ENSMUSG00000073002.10	ENSMUST00000101285.10	623	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTCTCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	72357406	72346009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72346454_72347176_72347315_72357363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021171	chr6	-	559	4	FSM	ENSMUSG00000073002.10	ENSMUST00000074231.6	553	4	0	-6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72357451	72346010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72346163_72346272_72346454_72347176_72347315_72357363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021172	chr6	-	583	2	NNC	ENSMUSG00000073002.10	novel	623	3	NA	NA	1804	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72347314	72346010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72346454_72347174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021173	chr6	-	446	1	NIC	ENSMUSG00000073002.10	novel	2619	2	NA	NA	2662	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72346456	72346010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_72346000_72346500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021174	chr6	-	297	1	Genic_Genomic	ENSMUSG00000050732.10	novel	NA	NA	NA	NA	4393	1	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGCTTTACTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72362501	72362204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_72362200_72362500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021175	chr6	-	644	2	FSM	ENSMUSG00000050732.10	ENSMUST00000142613.2	2076	2	1268	164	1268	-164	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCAGATGCCCCAGACGC	NA	NA	NA	NA	NA	NA	NA	NA	72365626	72362374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72362637_72365244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021176	chr6	-	470	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	1	349	1	-344	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCCTTATCATCGTC	NA	NA	NA	NA	NA	NA	NA	NA	72367685	72362554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72362637_72365244_72365404_72367456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021177	chr6	-	268	2	NNC	ENSMUSG00000050732.10	novel	820	3	NA	NA	118	-3034	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGATTGGGAGAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	72367568	72365244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72365401_72367456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021178	chr6	-	637	1	Genic_Genomic	ENSMUSG00000053907.11	novel	NA	NA	NA	NA	1608	3	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTATTACTTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72410415	72409778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_72409800_72410400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021179	chr6	-	637	3	ISM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	4186	1261	-332	233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCATGTAACTGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	72412355	72411042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72411379_72411963_72412098_72412188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021180	chr6	-	105	1	ISM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	5161	1492	645	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGCCTTTTTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72411378	72411273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72411300_72411400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021181	chr6	-	158	2	FSM	ENSMUSG00000053907.11	ENST00000477975.2	158	2	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTAGCCTTTTTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72412021	72411273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72411379_72411968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021182	chr6	-	1086	3	ISM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	3518	1641	-998	105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTAATGCTACATATT	NA	NA	NA	NA	NA	NA	NA	NA	72413021	72411422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72412098_72412188_72412372_72412793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021183	chr6	-	413	3	ISM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	3214	796	-1302	-796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGAGCTCATGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	72413325	72412323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72412372_72412793_72413013_72413179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021184	chr6	-	378	3	ISM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	3051	1340	-1465	-1340	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAAAATACCTTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	72413488	72412867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72413013_72413179_72413324_72413399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021185	chr6	-	341	3	ISM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	2438	1692	-2078	-1692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTACATTGCCTTGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	72414101	72413219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72413324_72413399_72413513_72413977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021186	chr6	-	319	3	ISM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	2104	1871	2104	-1871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACGATGTTTATTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	72414435	72413398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72413513_72413977_72414101_72414353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021187	chr6	-	371	3	NNC	ENSMUSG00000053907.11	novel	3387	8	NA	NA	30	-2458	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAAGGTATGTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	72416509	72413985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72414101_72414356_72414432_72416328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021188	chr6	-	367	3	ISM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	28	2467	28	-2467	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACTCTTCCAAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	72416511	72413994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72414101_72414353_72414432_72416328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021189	chr6	+	1563	1	FSM	ENSMUSG00000108591.2	ENSMUST00000205370.2	1560	1	2	-5	2	5	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTCTGGAGCTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	72416035	72417598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_72416000_72417600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021190	chr6	+	357	3	ISM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	6343	6731	6343	-6729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGTGGCTGGGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	72532598	72533235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72532633_72532733_72532889_72533067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021191	chr6	+	376	3	ISM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	6578	5120	6578	-5118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATCTTGGGGTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	72532833	72534846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72532889_72533067_72533236_72534693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021192	chr6	+	320	3	ISM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	6905	4724	6905	-4722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACTACAGGCCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72533160	72535242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72533236_72534693_72534844_72535147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021193	chr6	+	328	3	ISM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	9532	2	9532	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCCTGTGTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72535787	72539964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72535855_72538010_72538100_72539792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021194	chr6	+	175	1	NIC	ENSMUSG00000056737.15	novel	1247	10	NA	NA	13534	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCCTGTGTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72539789	72539964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_72539800_72540000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021195	chr6	-	631	1	ISM	ENSMUSG00000056698.12	ENSMUST00000114069.8	2164	13	31778	12	19950	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTGGTATTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72543547	72542916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72542900_72543500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021196	chr6	-	209	1	NIC	ENSMUSG00000056698.12	novel	2164	13	NA	NA	19649	2	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGGAGAGACCAGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	72543848	72543639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_72543600_72543800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021197	chr6	-	419	3	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	17168	0	17168	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACGGAGAGACCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	72546329	72543641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72543847_72545797_72545926_72546243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021198	chr6	-	337	3	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	10742	2156	10742	-1265	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCACTTCCTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72552755	72545797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72545926_72546243_72546321_72552623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021199	chr6	-	300	3	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	9138	2633	9138	-1742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCCTTGAGAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	72554359	72546274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72546321_72552623_72552755_72554236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021200	chr6	-	316	3	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	8813	9057	8813	-8166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTACCTGGTCATGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	72554684	72552698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72552755_72554236_72554360_72554547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021201	chr6	-	239	2	NNC	ENSMUSG00000056698.12	novel	1015	9	NA	NA	8833	-9703	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGAAAAGCGCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	72554664	72554235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72554360_72554549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021202	chr6	-	306	3	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	6801	10626	6801	-9735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCATTGGGAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	72556696	72554267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72554360_72554547_72554672_72556606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021203	chr6	-	275	3	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	6144	10913	6144	-10022	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTGAGTGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	72557353	72554554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72554672_72556606_72556695_72557283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021204	chr6	+	588	1	ISM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	9363	0	9210	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGATATCTGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	72584820	72585408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_72584800_72585400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021205	chr6	-	3143	1	Genic_Genomic	ENSMUSG00000056429.5	novel	NA	NA	NA	NA	5430	4	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAAACATTACATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	72588553	72585410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_72585400_72588600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021206	chr6	-	4137	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	291	585	291	-585	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTGATGCATGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72593692	72585999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021207	chr6	-	770	1	ISM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	58096	0	57409	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACTCGAATTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	72818866	72818096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72818100_72818900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021208	chr6	-	593	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	-17	-6	-17	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAATTTTTTAGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	72935488	72934323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72934636_72934895_72935008_72935319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021209	chr6	-	565	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	10	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGTCTGAATTTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	72935461	72934328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72934636_72934891_72935008_72935319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021210	chr6	-	536	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72935448	72934329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72934625_72934895_72935008_72935319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021211	chr6	-	534	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72935442	72934329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72934625_72934891_72935008_72935319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021212	chr6	-	555	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72935461	72934329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72934625_72934889_72935008_72935319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021213	chr6	-	306	1	ISM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	836	0	650	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72934635	72934329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_72934300_72934600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021214	chr6	-	538	3	NNC	ENSMUSG00000079523.9	novel	570	3	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	72935448	72934329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_72934636_72934895_72934999_72935319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021215	chr6	-	687	2	FSM	ENSMUSG00000079523.9	ENSMUST00000114049.2	690	2	4	-1	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGGCGTGGTCTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	72935281	72934334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72934636_72934895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021216	chr6	-	375	1	NIC	ENSMUSG00000079523.9	novel	570	3	NA	NA	275	2	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTGAACAGGAAAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	72935010	72934635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_72934600_72935000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021217	chr6	-	436	2	FSM	ENSMUSG00000079523.9	ENSMUST00000144337.2	433	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCATTGAACAGGAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	72935384	72934636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_72935008_72935319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021218	chr6	+	450	3	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	144	16319	144	-16319	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAACGGCTTCCGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	73225508	73237575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_73225737_73233153_73233258_73237457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021219	chr6	+	298	2	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	12089	12927	12089	-12927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTAATCGGGCCAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	73237453	73240967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_73237575_73240790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021220	chr6	+	322	3	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	15460	7512	15460	-7512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTTGGCCGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	73240824	73246382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_73241004_73241212_73241271_73246297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021221	chr6	+	295	3	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	15848	5788	15848	-5788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTATGTGTGGAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	73241212	73248106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_73241271_73246297_73246382_73247953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021222	chr6	+	343	2	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	22588	1521	22588	-1521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACACGATAGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73247952	73252373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_73248106_73252183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021223	chr6	+	354	2	ISM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	26819	65	26819	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTATTTTCACTTACT	NA	NA	NA	NA	NA	NA	NA	NA	73252183	73253829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_73252373_73253664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021224	chr6	+	207	1	Genic_Genomic	ENSMUSG00000052738.15	novel	NA	NA	NA	NA	28324	1	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAAGACTTTTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	73253688	73253895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_73253700_73253900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021225	chr6	+	352	2	Antisense	novelGene_ENSMUSG00000107951.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGATTTCATTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	75252942	75273306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr6_+_75252987_75272998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021226	chr6	-	370	1	Genic_Genomic	ENSMUSG00000030045.11	novel	NA	NA	NA	NA	7773	35	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGGGGTGGTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	81935166	81934796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_81934800_81935200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021227	chr6	-	486	2	ISM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	3459	4010	3459	-4010	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCGGAAGGCGAGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	81939480	81938841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_81939144_81939296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021228	chr6	+	1090	2	ISM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	29454	382	-20714	-381	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAACTGACACCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	82048057	82069698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_82048224_82068774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021229	chr6	+	1267	2	FSM	ENSMUSG00000035104.15	ENST00000393913.8	1267	2	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTCGTGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	82068771	82070079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_82069360_82069400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021230	chr6	+	1069	1	ISM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	50408	0	240	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCGTGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	82069011	82070080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_82069000_82070100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021231	chr6	-	1021	1	Genic_Genomic	ENSMUSG00000030042.16	novel	NA	NA	NA	NA	5150	1	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTGAAGTGTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	82624701	82623680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_82623700_82624700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021232	chr6	-	1075	3	ISM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	765	385	706	-385	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCACTTTTAGTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	82629145	82624066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_82625018_82628417_82628460_82629063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021233	chr6	-	647	1	ISM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	25831	1407	25780	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTAGCCCTCTGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	82890919	82890272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_82890300_82890900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021234	chr6	-	684	3	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	22369	215	22369	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGACGTCTATCTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	82894330	82890488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_82891086_82891347_82891407_82894302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021235	chr6	-	633	4	ISM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	21036	4295	21036	-4295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTGTATTCGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	82895663	82894568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_82894680_82894803_82895027_82895164_82895313_82895512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021236	chr6	+	835	5	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	11532	23839	11532	-23724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTTCTACCCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	82944946	82983440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021237	chr6	+	861	5	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	25380	3890	25380	-3775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAACCCCTGTGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	82958794	83003389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021238	chr6	+	1205	5	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	49072	-19	49072	19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCAGAACCTTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	82982486	83007298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_82982650_82983298_82983441_83003178_83003390_83005372_83005514_83006750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021239	chr6	+	836	3	ISM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	69750	59	69750	56	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGTGAGGTCAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83003164	83007220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83003390_83005372_83005514_83006750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021240	chr6	-	783	1	Genic_Genomic	ENSMUSG00000068335.7	novel	NA	NA	NA	NA	1757	2	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGCGTATGAATGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	83008695	83007912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_83007900_83008700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021241	chr6	-	1151	4	ISM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	569	391	569	-391	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGCTTGGGACTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83009883	83008305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021242	chr6	+	201	2	ISM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	32	16992	32	-15102	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTATCAGCCCAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	83011185	83012551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83011271_83012435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021243	chr6	+	204	2	ISM	ENSMUSG00000000693.11	ENST00000409986.5	1762	10	209	13150	209	-13150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGATGCCGGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	83012668	83014503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83012779_83014409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021244	chr6	+	314	2	ISM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	3266	14008	1960	-12118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCGGTATGCTGGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	83014419	83015535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83014574_83015375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021245	chr6	+	279	2	ISM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	13918	3823	12612	-1933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCGCATGGGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	83025071	83025720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83025189_83025558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021246	chr6	+	230	2	ISM	ENSMUSG00000000693.11	ENST00000409986.5	1762	10	13129	1725	13129	-1725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTGAGGACTGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	83025588	83025928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83025740_83025849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021247	chr6	+	232	2	ISM	ENSMUSG00000000693.11	ENST00000409986.5	1762	10	13447	1355	13447	-1355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTCTTGGCTACGCCA	NA	NA	NA	NA	NA	NA	NA	NA	83025906	83026298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83026005_83026164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021248	chr6	+	277	2	ISM	ENSMUSG00000000693.11	ENST00000409986.5	1762	10	13720	1065	13720	-1065	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAACCCGCTTCACTGCG	NA	NA	NA	NA	NA	NA	NA	NA	83026179	83026588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83026333_83026464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021249	chr6	+	241	2	ISM	ENSMUSG00000000693.11	ENST00000409986.5	1762	10	14050	776	14050	-776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACTGGCCTTATGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	83026509	83026877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83026628_83026754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021250	chr6	+	211	2	ISM	ENSMUSG00000000693.11	ENST00000409986.5	1762	10	14636	271	14636	-271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGACATCACAGATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	83027095	83027382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83027213_83027288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021251	chr6	+	375	3	ISM	ENSMUSG00000000693.11	ENST00000393937.6	2277	11	14847	374	14847	271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCTTACCACAAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	83027306	83027924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83027426_83027538_83027651_83027780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021252	chr6	+	956	1	ISM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	17434	0	16128	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCGCCCCCCAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	83028587	83029543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83028600_83029500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021253	chr6	-	1510	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	83047201	83045303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_83046273_83046660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021254	chr6	-	970	1	Genic_Genomic	ENSMUSG00000068327.6	novel	NA	NA	NA	NA	933	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGTCTCCAGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	83046273	83045303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_83045300_83046300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021255	chr6	+	146	2	ISM	ENSMUSG00000107499.2	ENSMUST00000101254.9	2317	9	980	5349	980	-5349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAGAAAAGGACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	83079561	83080026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83079620_83079938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021256	chr6	+	151	2	ISM	ENSMUSG00000107499.2	ENSMUST00000101254.9	2317	9	5975	546	5975	-546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCTCTCACTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	83084556	83084829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83084614_83084735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021257	chr6	+	687	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83086028	83086920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_83086185_83086294_83086408_83086502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021258	chr6	+	516	2	NNC	ENSMUSG00000030037.10	novel	695	3	NA	NA	279	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83086299	83086920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_83086398_83086502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021259	chr6	+	131	1	ISM	ENSMUSG00000079511.9	ENSMUST00000101253.6	3628	12	8192	0	8192	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83086789	83086920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83086800_83086900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021260	chr6	+	1299	2	ISM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	1275	677	1275	-677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGGCCTCCACCTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	83093751	83095202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83093806_83093957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021261	chr6	+	1276	1	ISM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	2127	0	2127	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCCTTGCTTTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	83094603	83095879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83094600_83095900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021262	chr6	-	499	1	Genic_Genomic	ENSMUSG00000030035.15	novel	NA	NA	NA	NA	1740	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTAGAGTAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	83096515	83096016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_83096000_83096500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021263	chr6	-	555	3	ISM	ENSMUSG00000030035.15	ENST00000393972.7	1325	5	1169	414	982	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAACTGGTGACTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	83097273	83096431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83096702_83096848_83097026_83097165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021264	chr6	-	371	3	ISM	ENSMUSG00000030035.15	ENSMUST00000151393.7	837	5	28	762	28	361	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAACTCTGGTGTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	83098359	83097178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83097269_83097752_83097858_83098183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021265	chr6	-	771	2	ISM	ENSMUSG00000030034.13	ENSMUST00000032109.5	1038	5	865	-63	865	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATCGAATTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83101145	83098745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83099346_83100974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021266	chr6	-	603	1	NIC	ENSMUSG00000030034.13	novel	1503	5	NA	NA	2662	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATCGAATTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	83099348	83098745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_83098700_83099300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021267	chr6	+	665	1	ISM	ENSMUSG00000034930.17	ENSMUST00000065512.11	2191	12	16103	0	14683	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83128895	83129560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83128900_83129600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021268	chr6	-	190	1	NIC	ENSMUSG00000030032.15	novel	4634	10	NA	NA	3499	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGTCTGAGCACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	83129880	83129690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_83129700_83129900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021269	chr6	-	328	3	ISM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	46	2943	46	-2943	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTAAGGCAAGGAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	83133333	83132633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83132854_83133156_83133228_83133296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021270	chr6	+	1575	2	ISM	ENSMUSG00000030030.6	ENSMUST00000032106.6	2020	4	4848	0	4751	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTGGCAAAGATGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	83138233	83139927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83138420_83138538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021271	chr6	+	608	4	ISM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	9600	2200	9600	-1894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGTGGATATCACTCG	NA	NA	NA	NA	NA	NA	NA	NA	83172527	83174899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83172673_83172922_83173090_83174472_83174607_83174737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021272	chr6	+	274	2	ISM	ENSMUSG00000068323.13	ENST00000377632.5	3019	22	21	59789	21	-59789	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGTGGAAGGAGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	83203202	83217698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83203370_83217591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021273	chr6	+	268	2	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	27622	29501	27622	-29468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTACCAACGCGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	83245211	83248019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83245365_83247904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021274	chr6	+	263	2	ISM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	47683	11290	47683	-11257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGCCCACATCGACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	83265272	83266230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83265434_83266128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021275	chr6	+	232	2	ISM	ENSMUSG00000068323.13	ENST00000377632.5	3019	22	64571	3131	50163	-3131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCAATGGTGAGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	83267752	83274356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83267829_83274200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021276	chr6	-	1726	6	ISM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	5668	0	1598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTGTCTCAGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	83288920	83282672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021277	chr6	-	516	4	ISM	ENSMUSG00000005667.9	ENST00000515074.1	783	6	8	1519	8	-1519	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCTGCACACAGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	83290510	83287432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83287502_83288191_83288345_83288793_83288917_83290339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021278	chr6	+	1835	3	ISM	ENSMUSG00000043131.15	ENSMUST00000038658.15	4119	4	3815	2068	3815	-2068	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATTTTGATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	83306876	83318689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83307016_83315262_83315427_83317157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021279	chr6	+	1547	3	ISM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	8078	2334	8014	-2333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTTTGTATCAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	83311075	83318424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83311192_83315262_83315427_83317157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021280	chr6	+	1523	1	ISM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	16238	0	16174	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTATTATCTACGTC	NA	NA	NA	NA	NA	NA	NA	NA	83319235	83320758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83319200_83320800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021281	chr6	+	574	2	ISM	ENSMUSG00000045160.15	ENSMUST00000120040.8	583	4	3823	-257	3593	232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTGATGCCAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83330020	83335610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83330113_83335128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021282	chr6	+	539	2	NNC	ENSMUSG00000045160.15	novel	2312	4	NA	NA	3594	194	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTAGGTCTCCTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	83330021	83335572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_83330117_83335128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021283	chr6	+	557	1	Genic_Genomic	ENSMUSG00000045160.15	novel	NA	NA	NA	NA	10136	2	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTCCATTCATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	83336563	83337120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_83336600_83337100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021284	chr6	-	777	5	ISM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	16356	0	16325	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	83467595	83457198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021285	chr6	-	640	4	FSM	ENSMUSG00000014554.14	ENST00000629438.2	644	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGTGTAACAGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	83483916	83458327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_83458445_83463965_83464114_83467402_83467591_83483729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021286	chr6	-	1011	6	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	4732	-82	4732	4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	83500240	83489811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021287	chr6	-	799	6	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	1053	3421	1053	-3421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCATTGCTGACAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	83503919	83493314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021288	chr6	-	355	3	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	14092	-3	14092	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATCTATGTGGAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	83533395	83524209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83524313_83528925_83529039_83533256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021289	chr6	-	355	3	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	12942	4736	12942	-4736	internal_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTCCCCAAAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	83534545	83528948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83529039_83533256_83533395_83534418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021290	chr6	-	322	3	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	8738	9078	8738	-9078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGGACTCCTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	83538749	83533290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83533395_83534418_83534544_83538656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021291	chr6	-	405	3	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	8461	10206	8461	-10206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCGGGTGTAACTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	83539026	83534418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83534544_83538656_83538748_83538837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021292	chr6	-	313	3	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	6585	14506	6585	-14506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGCCACCTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	83540902	83538718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83538748_83538837_83539024_83540804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021293	chr6	-	316	3	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	6249	14667	6249	-14667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAAAAAGAACGGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	83541238	83538879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83539024_83540804_83540901_83541162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021294	chr6	-	374	3	ISM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	1	16592	1	-16592	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGCAGAGCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	83547486	83540804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83540901_83541162_83541239_83547284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021295	chr6	-	582	2	ISM	ENSMUSG00000006906.11	ENST00000394073.6	1407	10	27	23071	27	-23071	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAGCTACCGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	83549370	83547283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83547502_83549006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021296	chr6	+	1079	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	163	0	163	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	83688408	83715295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_83688526_83710080_83710269_83714521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021297	chr6	-	1980	1	ISM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	4949	0	4949	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTAGTGTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	83747846	83745866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83745900_83747800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021298	chr6	-	2267	4	ISM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	1949	478	1949	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTATCCTCTCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	83750846	83746344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021299	chr6	+	627	5	ISM	ENSMUSG00000034744.14	ENST00000443938.6	1081	9	2381	0	2381	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCCCTAGCAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	83776268	83779527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_83776366_83777252_83777341_83778072_83778171_83778492_83778559_83779249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021300	chr6	-	1842	1	ISM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	24499	0	24499	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGGCCTCTGTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	83784224	83782382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_83782400_83784200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021301	chr6	+	472	1	FSM	ENSMUSG00000081669.2	ENSMUST00000119728.2	528	1	430	-374	430	374	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTACAGGCTTAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	85053603	85054075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_85053600_85054100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021302	chr6	-	175	1	ISM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	3914	0	3904	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGCGTTGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	85110834	85110659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_85110700_85110800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021303	chr6	-	335	2	ISM	ENSMUSG00000033735.10	ENSMUST00000174286.3	775	4	760	134	754	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGAGCCCATGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	85113984	85111115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_85111271_85113804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021304	chr6	-	293	2	ISM	ENSMUSG00000033735.10	ENSMUST00000174286.3	775	4	178	2967	172	-2967	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGTTAACATCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	85114566	85113948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_85114096_85114420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021305	chr6	-	1802	1	FSM	ENSMUSG00000076012.3	ENSMUST00000102058.3	82	1	-390	-1330	-390	1330	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTTTGTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	85313745	85311943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_85311900_85313700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021306	chr6	-	1861	2	ISM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	37006	482	37006	-477	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGACGTCAGTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85314540	85312425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_85314209_85314462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021307	chr6	+	1055	1	ISM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	13392	0	13392	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACAATGCCTTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85422362	85423417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85422400_85423400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021308	chr6	-	195	1	ISM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	4279	0	4244	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	85423986	85423791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_85423800_85424000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021309	chr6	-	207	2	ISM	ENSMUSG00000030008.10	ENSMUST00000113770.2	610	4	2656	906	2656	-906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGTAAGGAGTGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	85425574	85424922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_85425028_85425472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021310	chr6	+	1120	6	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	0	6384	0	-6140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTCTTCTTCGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	85428495	85439073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021311	chr6	+	962	7	ISM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	7602	2390	2	-2146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAAGAAACCCTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	85436097	85443067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021312	chr6	+	941	6	ISM	ENSMUSG00000030007.9	ENSMUST00000204592.3	1544	11	9934	520	2912	-469	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCGGGCTCGACACGCA	NA	NA	NA	NA	NA	NA	NA	NA	85439007	85444744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021313	chr6	+	609	4	ISM	ENSMUSG00000030007.9	ENST00000406551.2	1571	11	2912	1512	2912	-1512	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGCCTATTGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85439007	85443701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85439180_85441774_85441927_85442881_85443071_85443605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021314	chr6	+	1199	6	ISM	ENSMUSG00000030007.9	ENST00000406551.2	1571	11	5682	-244	5682	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	85441777	85445457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021315	chr6	+	725	2	Genic_Genomic	ENSMUSG00000040078.10	novel	480	1	NA	NA	-84	267	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCCATGAGGCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	85820877	85821708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_85821134_85821239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021316	chr6	+	619	1	FSM	ENSMUSG00000040078.10	ENSMUST00000160012.2	480	1	280	-419	280	419	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTAAAGGAGGCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	85821241	85821860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_85821200_85821900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021317	chr6	+	644	4	FSM	ENSMUSG00000054226.14	ENST00000318190.7	637	4	0	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACAGAAAGCCGGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	85901342	85905856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_85901505_85904139_85904346_85904789_85904967_85905757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021318	chr6	+	1591	4	NNC	ENSMUSG00000054226.14	novel	637	4	NA	NA	13	-445	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTCATTCACACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	85901355	85906819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_85901502_85904139_85904346_85904789_85904967_85905757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021319	chr6	+	320	2	ISM	ENSMUSG00000054226.14	ENST00000318190.7	637	4	2881	862	2881	-90	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAGTAGATGAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	85904223	85904987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85904346_85904789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021320	chr6	+	162	1	NIC	ENSMUSG00000054226.14	novel	814	6	NA	NA	3573	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGACTCATTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	85904915	85905077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_85904900_85905100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021321	chr6	+	281	1	ISM	ENSMUSG00000054226.14	ENSMUST00000089570.7	1216	6	12493	0	3879	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGATTTGGACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	85905221	85905502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85905200_85905500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021322	chr6	+	1205	1	ISM	ENSMUSG00000054226.14	ENSMUST00000113753.8	2222	7	13342	0	4719	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTTATTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	85906061	85907266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_85906100_85907300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021323	chr6	-	1862	1	ISM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	17538	0	17538	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACTATCTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	85921111	85919249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_85919200_85921100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021324	chr6	-	1895	2	ISM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	11870	3794	11870	-3794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACCCTGCATGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85926779	85923043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_85924759_85926599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021325	chr6	+	364	4	FSM	ENSMUSG00000029999.15	ENST00000295400.11	362	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240134	86249478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_86240259_86246911_86247062_86248361_86248389_86249415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021326	chr6	+	348	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240134	86249478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86240259_86246911_86247062_86249404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021327	chr6	+	341	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240134	86249478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86240259_86246911_86247066_86249415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021328	chr6	+	350	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240136	86249478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86240259_86246911_86247066_86249404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021329	chr6	+	356	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240136	86249478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86240259_86246911_86247083_86249415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021330	chr6	+	343	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCGTCCATGCTAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	86240137	86249478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86240257_86246911_86247062_86249404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021331	chr6	+	273	3	NNC	ENSMUSG00000029999.15	novel	362	4	NA	NA	16	-1089	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGCCGTGCCCTCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	86240161	86248389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86240257_86246911_86247062_86248361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021332	chr6	+	328	1	FSM	ENSMUSG00000072940.6	ENSMUST00000119024.2	210	1	-22	-96	-22	96	mono-exon	FALSE	NA	NA	NA	NA	NA	584	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTTACTTAACATCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	86310990	86311318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_86311000_86311300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021333	chr6	+	196	2	Genic_Genomic	ENSMUSG00000072940.6	novel	210	1	NA	NA	136	21976	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTTCCTGTGCATAATA	NA	NA	NA	NA	NA	NA	NA	NA	86311148	86333198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_86311312_86333165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021334	chr6	+	1643	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	86342627	86347040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_86342802_86343591_86343733_86345712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021335	chr6	+	1038	3	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGCAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86348283	86356310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86348601_86353476_86353602_86355714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021336	chr6	+	1042	3	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGCAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86348284	86356310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86348606_86353476_86353602_86355714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021337	chr6	+	1055	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGCAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86348285	86356310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021338	chr6	+	1025	3	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGCAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86348293	86356310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86348601_86353476_86353599_86355714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021339	chr6	+	1029	4	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGCAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86348308	86356310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86348597_86352658_86352682_86353476_86353599_86355714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021340	chr6	+	992	3	NNC	ENSMUSG00000057278.9	novel	1055	4	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCAGCAGGCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	86348355	86356310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_86348627_86353476_86353602_86355714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021341	chr6	-	4356	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	13	-74	0	74	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATATAACCTACTGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	86374123	86362913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021342	chr6	-	706	3	ISM	ENSMUSG00000029998.15	ENST00000264441.9	1205	6	4741	0	4741	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTGTATGAAAGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	86369332	86365728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_86366068_86368657_86368811_86369118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021343	chr6	-	343	1	ISM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	8065	2741	8002	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTGTATGAAAGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	86366071	86365728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_86365700_86366100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021344	chr6	+	606	1	Genic_Genomic	ENSMUSG00000071337.12	novel	NA	NA	NA	NA	28465	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAAAGTTCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	86409782	86410388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_86409800_86410400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021345	chr6	-	260	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	1571	-1	1571	1	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTATTTGAAAGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	86501732	86501472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_86501500_86501700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021346	chr6	-	3843	1	ISM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	18277	0	18277	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCCTGTGTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	86627866	86624023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_86624000_86627900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021347	chr6	-	812	5	ISM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	1545	-2	0	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGACTTGTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	86659959	86652130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021348	chr6	-	449	4	NNC	ENSMUSG00000001158.14	novel	504	4	NA	NA	53	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTTACTTACTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	86659906	86652371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_86652559_86657888_86657969_86658572_86658686_86659837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021349	chr6	-	505	4	FSM	ENSMUSG00000001158.14	ENST00000409116.5	504	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTTTACTTACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86659959	86652372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_86652563_86657888_86657969_86658572_86658686_86659837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021350	chr6	-	964	1	Genic_Genomic	ENSMUSG00000001157.14	novel	NA	NA	NA	NA	40511	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCTGTTTAAAGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	86669711	86668747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_86668700_86669700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021351	chr6	-	551	1	ISM	ENSMUSG00000029994.18	ENSMUST00000113675.8	2030	12	28520	0	28520	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATTCTTTCTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	86714372	86713821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_86713800_86714400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021352	chr6	-	1413	6	ISM	ENSMUSG00000029994.18	ENSMUST00000113675.8	2030	12	14790	1	14790	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATTCTTTCTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	86728102	86713822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021353	chr6	-	615	1	FSM	ENSMUSG00000100164.2	ENSMUST00000185414.2	1042	1	427	0	427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTATTTTTCCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	86825995	86825380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_86825400_86826000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021354	chr6	+	593	5	ISM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	9525	0	9525	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTGCTTCCTCTCACG	NA	NA	NA	NA	NA	NA	NA	NA	86996342	87005441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021355	chr6	+	169	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGTAAGAAGGCTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	87071039	87071208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr6_+_87071000_87071200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021356	chr6	+	1037	4	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	122	3055	119	-3055	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTACCCCTGGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	87707993	87727704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87708523_87709655_87709919_87726113_87726260_87727605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021357	chr6	+	672	4	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	1786	1871	1783	-1871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGGGCCCTAAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	87709657	87728888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87709919_87726113_87726260_87727605_87727705_87728722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021358	chr6	+	252	2	ISM	ENSMUSG00000068263.12	ENST00000683648.1	1502	7	18238	3055	18235	-3055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTACCCCTGGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	87726109	87727704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87726260_87727602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021359	chr6	+	552	4	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	18238	592	18235	-592	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGAACTCGGGGAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	87726109	87730167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87726260_87727605_87727705_87728722_87728888_87730029
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021360	chr6	+	178	2	ISM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	22156	-1	22153	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGGACCGGAACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	87730027	87730760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87730168_87730722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021361	chr6	-	887	1	FSM	ENSMUSG00000068262.5	ENSMUST00000089501.5	1209	1	437	-115	437	115	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAAGCTGGGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	87742749	87741862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_87741900_87742700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021362	chr6	-	1242	2	FSM	ENSMUSG00000030055.17	ENSMUST00000032135.6	1262	2	54	-34	54	34	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCTATCAGTCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	87788707	87770916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_87771780_87788328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021363	chr6	-	527	1	ISM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	24002	1	20955	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAGATTTGTCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	87791778	87791251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_87791300_87791800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021364	chr6	-	1799	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	3	-141	3	141	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTGGCTTGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87828059	87819922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021365	chr6	-	1210	2	ISM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	5701	73	5701	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTTTTAAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	87822311	87820136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_87821139_87822103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021366	chr6	-	1349	4	NNC	ENSMUSG00000030057.16	novel	2175	5	NA	NA	5240	-157	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGTCCTAGAAAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	87822772	87820220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_87821139_87822103_87822303_87822442_87822540_87822637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021367	chr6	-	1248	4	ISM	ENSMUSG00000030057.16	ENSMUST00000113617.3	952	6	5261	-542	5231	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCATTTTCACAGAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	87822781	87820326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021368	chr6	-	480	4	ISM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	-5	2665	-5	-1393	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGGAGCCCAAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	87828093	87822261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_87822303_87822446_87822540_87822637_87822776_87827885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021369	chr6	+	426	3	ISM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	2	18645	2	-18645	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGCGTGTATAGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	87890918	87894966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87890994_87891472_87891678_87894820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021370	chr6	+	354	3	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	306	14978	306	-14978	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAGCAGTTGTGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	87891593	87898633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87891678_87894820_87894965_87898507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021371	chr6	+	308	2	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	7218	10818	7218	-10818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCACTGTTTTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	87898505	87902793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87898634_87902613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021372	chr6	+	370	2	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	11324	3199	11324	-3199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTAGGGACTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	87902611	87910412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87902793_87910223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021373	chr6	+	424	2	ISM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	18933	312	18933	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTAGGCTCCATACCA	NA	NA	NA	NA	NA	NA	NA	NA	87910220	87913299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_87910417_87913071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021374	chr6	+	278	1	Genic_Genomic	ENSMUSG00000030060.15	novel	NA	NA	NA	NA	22047	1	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCTCACCCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	87913334	87913612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_87913300_87913600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021375	chr6	-	1132	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	85	0	85	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTCGTTGTCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	87958534	87957402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_87957400_87958500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021376	chr6	+	1163	2	FSM	ENSMUSG00000084950.8	ENSMUST00000134600.2	1434	2	28	243	28	-243	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGATTGGTGTTTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	87957892	87960919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_87958078_87959941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021377	chr6	+	1127	1	NIC	ENSMUSG00000084950.8	novel	815	3	NA	NA	1375	4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTTTAAGCTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	87960039	87961166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_87960000_87961200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021378	chr6	-	273	1	Genic_Genomic	ENSMUSG00000079477.10	novel	NA	NA	NA	NA	20406	1	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTCTTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87976359	87976086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_87976100_87976400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021379	chr6	-	602	3	ISM	ENSMUSG00000079477.10	ENSMUST00000095048.6	1275	6	14576	333	14576	91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTCGTGCACACAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	87982189	87977254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_87977513_87981152_87981282_87981974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021380	chr6	-	341	2	NNC	ENSMUSG00000079477.10	novel	2159	6	NA	NA	15484	52	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCGAACAGTTACCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	87981281	87977293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_87977506_87981152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021381	chr6	-	606	4	ISM	ENSMUSG00000079477.10	ENSMUST00000203674.3	424	5	-71	4627	1	-4627	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCCGACTGCAGTTACG	NA	NA	NA	NA	NA	NA	NA	NA	88022251	87981972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_87982194_87989288_87989416_87990619_87990681_88022054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021382	chr6	+	1178	3	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	-111	5540	-111	-5540	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTCCAGCTTCACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	88175549	88177791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_88175864_88176498_88176772_88177200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021383	chr6	+	1405	4	ISM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	1591	571	1591	-571	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGACAGGTTTACAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	88177251	88182760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_88177843_88179400_88179547_88181606_88181691_88182176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021384	chr6	-	604	2	Antisense	novelGene_ENSMUSG00000015053.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGAGAGCTGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	88179459	88177291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr6_-_88177835_88179398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021385	chr6	+	615	1	ISM	ENSMUSG00000015053.15	ENSMUST00000170089.8	3135	6	11845	682	7057	1	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCAAAGCGAAAACCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	88182717	88183332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_88182700_88183300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021386	chr6	+	396	1	ISM	ENSMUSG00000015053.15	ENSMUST00000170089.8	3135	6	12746	0	7958	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCCTGTTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88183618	88184014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_88183600_88184000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021387	chr6	-	1193	2	ISM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	164857	-1	164845	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTGATCAAATGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	88258664	88234314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_88235374_88258530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021388	chr6	-	1062	1	Genic_Genomic	ENSMUSG00000033216.10	novel	NA	NA	NA	NA	188133	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTGATCAAATGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	88235376	88234314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_88234300_88235400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021389	chr6	-	1134	4	ISM	ENSMUSG00000033216.10	ENSMUST00000205179.3	2208	8	70116	39700	70116	-39700	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGCCCTTGGGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88353393	88274554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_88275219_88332464_88332630_88335527_88335625_88353185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021390	chr6	+	2251	7	FSM	ENSMUSG00000033174.18	ENST00000453507.6	2255	7	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTCGATGCATGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	88702036	88804043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_88702161_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88800172_88800389_88802632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021391	chr6	-	864	3	ISM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	2688	-328	2688	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	88815223	88812895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_88813435_88813506_88813708_88815099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021392	chr6	-	975	3	ISM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	13915	2	13915	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCCTTTGGTTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88861847	88860457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_88861093_88861357_88861514_88861663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021393	chr6	-	938	6	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	6673	-4324	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAGAGTGGACCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	88869089	88864779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_88864953_88865153_88865248_88865991_88866188_88866769_88866905_88868654_88868863_88868957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021394	chr6	-	899	1	Genic_Genomic	ENSMUSG00000030084.12	novel	NA	NA	NA	NA	40506	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGGCTCTGAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	89294193	89293294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_89293300_89294200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021395	chr6	+	484	1	ISM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	31058	0	30868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTTTTTTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	89652027	89652511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_89652000_89652500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021396	chr6	-	1652	3	FSM	ENSMUSG00000056643.6	ENSMUST00000070890.6	1653	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGGGCTTCTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	90302166	90285330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_90286790_90295240_90295324_90302056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021397	chr6	+	323	2	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	5	39522	5	-39522	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTACCATCCATCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	90534191	90536404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90534334_90536223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021398	chr6	+	340	2	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	2100	38951	2100	-38951	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGAAGGCTGGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	90536286	90536975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90536459_90536807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021399	chr6	+	269	2	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	2620	36224	2620	-36224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTACCAAACCCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	90536806	90539702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90536974_90539600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021400	chr6	+	331	3	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	5413	34461	5413	-34461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACACTGTGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	90539599	90541465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90539703_90540346_90540437_90541327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021401	chr6	+	266	2	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	7139	32180	7139	-32180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACACCTTCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	90541325	90543746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90541466_90543620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021402	chr6	+	370	3	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	9433	29001	9433	-29001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGCCCTGTGACACCA	NA	NA	NA	NA	NA	NA	NA	NA	90543619	90546925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90543747_90546454_90546547_90546774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021403	chr6	+	383	3	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	12586	26965	12586	-26965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCTCCTGTACAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	90546772	90548961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90546923_90547765_90547886_90548848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021404	chr6	+	253	3	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	13646	21088	13646	-21088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGACAAGGCACAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	90547832	90554838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90547886_90548848_90548977_90554766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021405	chr6	+	179	2	NNC	ENSMUSG00000030088.16	novel	2480	20	NA	NA	13649	-26947	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCAGGAATCACCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	90547835	90548979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_90547884_90548848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021406	chr6	+	171	2	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	20578	18371	20578	-18371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCAGGTGAGTGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	90554764	90557555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90554838_90557457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021407	chr6	+	214	3	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	23270	9589	23270	-9589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCAGACCACCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	90557456	90566337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90557564_90560154_90560243_90566318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021408	chr6	+	286	3	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	25965	7043	25965	-7043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCCAGGCTAGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90560151	90568883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90560243_90566318_90566413_90568782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021409	chr6	+	262	2	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	34592	4303	34592	-4303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGGTCAGTCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	90568778	90571623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90568882_90571464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021410	chr6	+	459	3	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	37277	573	37277	-573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGACCTGGGTAACG	NA	NA	NA	NA	NA	NA	NA	NA	90571463	90575353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90571631_90573849_90573956_90575167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021411	chr6	+	226	2	ISM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	41014	-1	41014	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTGTGATACTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	90575200	90575927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90575368_90575868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021412	chr6	+	184	2	ISM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	145	34489	145	-34489	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGACAGAGGAGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	90581851	90588905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90581991_90588860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021413	chr6	+	173	2	ISM	ENSMUSG00000030089.16	ENSMUST00000032177.10	2324	10	21736	4110	21736	-4110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTCTGGCCTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	90617864	90619284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_90617946_90619192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021414	chr6	-	268	1	ISM	ENSMUSG00000034312.16	ENSMUST00000101151.10	6490	14	147409	2849	32132	2	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCTGCCTCCCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	90639696	90639428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_90639400_90639700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021415	chr6	-	294	2	ISM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	26907	253	26907	-253	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCGCCCTATCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	90644921	90639683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_90639938_90644881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021416	chr6	-	398	3	ISM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	25483	5470	25483	-5470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACCTCTCAGAAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	90646345	90644900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_90645059_90645622_90645785_90646267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021417	chr6	-	453	3	ISM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	17929	7976	17929	-7976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGACCTCCTGGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	90653899	90647406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_90647517_90648928_90649102_90653729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021418	chr6	-	1824	5	ISM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	4018	9548	4018	-9548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGGGCAAGAAGCCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	90667810	90648978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021419	chr6	-	1958	5	ISM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	-5	14333	-5	-14333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCTGGAGGACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	90671833	90653763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021420	chr6	-	1807	4	ISM	ENSMUSG00000034312.16	ENST00000273221.8	3040	13	56	19564	56	-18042	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTGGGGGGTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	90693295	90657472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_90657635_90666561_90667809_90671540_90671833_90693189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021421	chr6	-	235	1	FSM	ENSMUSG00000058700.3	ENSMUST00000080061.3	480	1	245	0	245	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATGTACACAAAGAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	90822197	90821962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_90822000_90822200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021422	chr6	+	740	5	FSM	ENSMUSG00000034245.11	ENST00000404040.5	739	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACTCACAGAACATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91134382	91150248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_91134528_91136142_91136244_91146376_91146474_91149146_91149326_91150030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021423	chr6	+	363	3	ISM	ENSMUSG00000034245.11	ENST00000446613.6	996	8	2	7586	2	-6665	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGGGTGGGATGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	91134384	91142661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91134528_91136142_91136244_91142542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021424	chr6	+	370	3	FSM	ENSMUSG00000034245.11	ENST00000402259.5	541	3	6	165	6	-165	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCATCCTCATGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	91134388	91150082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_91134528_91149146_91149326_91150030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021425	chr6	+	404	3	FSM	ENSMUSG00000034245.11	ENST00000405025.5	426	3	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTAGCACAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91134404	91149326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_91134528_91136142_91136244_91149146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021426	chr6	+	297	3	ISM	ENSMUSG00000034245.11	ENST00000446613.6	996	8	1758	5385	1758	-4464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTCTAAACCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	91136140	91144862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91136244_91142542_91142660_91144785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021427	chr6	+	356	4	ISM	ENSMUSG00000034245.11	ENST00000446613.6	996	8	8158	3774	8158	-2853	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTATCCCGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	91142540	91146473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91142660_91144785_91144863_91145790_91145854_91146376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021428	chr6	+	416	4	ISM	ENSMUSG00000034245.11	ENST00000446613.6	996	8	10404	921	10404	0	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTAGCACAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91144786	91149326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91144863_91145790_91145854_91146376_91146474_91149146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021429	chr6	+	182	1	NIC	ENSMUSG00000034245.11	novel	2653	10	NA	NA	14762	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTAGCACAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91149144	91149326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_91149100_91149300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021430	chr6	+	229	1	NIC	ENSMUSG00000034245.11	novel	2653	10	NA	NA	15637	1	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACTCACAGAACATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91150019	91150248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_91150000_91150200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021431	chr6	+	729	2	ISM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	35	39159	35	-38503	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCAAGATCAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	91189471	91210362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91189883_91210044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021432	chr6	+	711	3	ISM	ENSMUSG00000064080.13	ENST00000404922.8	3665	17	801	19315	801	-19315	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGCAAGTCCCACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	91210859	91229550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91211334_91227839_91227952_91229425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021433	chr6	+	585	2	ISM	ENSMUSG00000064080.13	ENST00000404922.8	3665	17	36885	-97	36885	97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGCTGGTTGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	91246943	91248962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91247070_91248503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021434	chr6	+	521	1	ISM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	59565	0	38943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTCTTTGACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	91249001	91249522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91249000_91249500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021435	chr6	-	778	1	ISM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	10597	0	10597	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATGCAGTACATGATCT	NA	NA	NA	NA	NA	NA	NA	NA	91439931	91439153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_91439200_91439900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021436	chr6	-	847	2	ISM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	5765	2394	5765	-2394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATGGGGCTGCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	91444763	91441547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_91442296_91444664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021437	chr6	+	733	4	FSM	ENSMUSG00000034192.6	ENSMUST00000040607.6	743	4	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	91492920	91499608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021438	chr6	+	156	1	ISM	ENSMUSG00000034192.6	ENSMUST00000040607.6	743	4	6537	5	6417	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTTTTTTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	91499446	91499602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91499400_91499600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021439	chr6	+	1840	1	FSM	ENSMUSG00000108526.2	ENSMUST00000206938.2	1836	1	0	-4	0	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTTTCTCAAACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	91686386	91688226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_91686400_91688200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021440	chr6	+	4430	3	ISM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	66215	0	66215	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGTGTGTTTCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	91727248	91736047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91727355_91729267_91729439_91731894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021441	chr6	+	1177	9	FSM	ENSMUSG00000034083.17	ENST00000303688.8	1190	9	14	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTGTCTCATAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	91855135	91876585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91875133_91875281_91876272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021442	chr6	+	347	1	ISM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	21444	0	21356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGGAACTTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	91876477	91876824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_91876500_91876800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021443	chr6	+	826	4	ISM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	69509	-224	69509	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCTAAGAACAGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	92138922	92144910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_92139034_92140101_92140240_92141168_92141275_92144439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021444	chr6	-	356	1	Genic_Genomic	ENSMUSG00000014550.15	novel	NA	NA	NA	NA	27859	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTGCTTAAAACGTC	NA	NA	NA	NA	NA	NA	NA	NA	92164047	92163691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_92163700_92164000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021445	chr6	-	238	1	NIC	ENSMUSG00000045095.17	novel	7209	24	NA	NA	230484	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCATGTGGTTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	93660051	93659813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_93659800_93660100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021446	chr6	-	359	2	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	227855	1400	227855	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCCTTTTTGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	93662680	93659858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93660072_93662534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021447	chr6	-	204	2	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	226915	4079	226915	-2724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTAAGTGACGGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	93663620	93662537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93662679_93663557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021448	chr6	-	247	3	ISM	ENSMUSG00000045095.17	ENST00000497477.6	3217	20	246038	3743	216270	-3743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCTGCTTCTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93674265	93663556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93663619_93663762_93663857_93674174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021449	chr6	-	424	2	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	213746	15779	213746	-14424	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGAGGGCTTTGGGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	93676789	93674237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93674469_93676596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021450	chr6	-	285	2	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	212173	18138	212173	-16783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTCATTCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	93678362	93676596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93676790_93678270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021451	chr6	-	289	2	ISM	ENSMUSG00000045095.17	ENST00000497477.6	3217	20	235122	18457	205354	-18457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTTTTATCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	93685181	93678270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93678363_93684984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021452	chr6	-	376	2	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	166179	64385	166179	-63030	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTATTGTAAATGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	93724356	93722843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93723036_93724172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021453	chr6	-	377	3	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	155790	65723	155790	-64368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGACAGGTGAGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	93734745	93724181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93724356_93731994_93732088_93734635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021454	chr6	-	280	2	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	127913	92129	127913	-90774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGACCAAGAGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	93762622	93750587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93750671_93762425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021455	chr6	-	411	2	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	120999	103967	120999	-102612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTATACCATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	93769536	93762425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93762628_93769327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021456	chr6	-	327	2	ISM	ENSMUSG00000045095.17	ENSMUST00000203688.3	4969	22	97729	110869	97729	-109514	internal_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAGAGATTGCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	93792806	93769327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93769535_93792686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021457	chr6	-	238	2	ISM	ENSMUSG00000045095.17	ENST00000497477.6	3217	20	2	132872	2	-132872	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTCTCCAGCTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	93920301	93792685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_93792807_93920184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021458	chr6	+	217	2	ISM	ENSMUSG00000045100.12	ENST00000336733.10	496	6	10408	58235	10408	-58235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTGCCTTTAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	94487731	94511230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_94487843_94511124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021459	chr6	+	480	2	FSM	ENSMUSG00000030031.15	ENST00000460576.5	955	2	6	469	6	-469	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAACTCTATCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	95094899	95103881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_95094956_95103457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021460	chr6	+	455	1	ISM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	9175	2421	9002	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGTCTTACTATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	95103895	95104350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_95103900_95104400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021461	chr6	-	247	1	FSM	ENSMUSG00000107747.2	ENSMUST00000204737.2	367	1	158	-38	158	38	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCTCGCGCTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	96010192	96009945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_96009900_96010200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021462	chr6	-	1112	1	Genic_Genomic	ENSMUSG00000030059.16	novel	NA	NA	NA	NA	25016	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTAAGTGGCAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	97131067	97129955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_97130000_97131100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021463	chr6	-	1160	2	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	22161	1459	22161	-1459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAATTACTTGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	97133922	97131416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_97132459_97133804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021464	chr6	-	1169	3	ISM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	2420	19211	2420	-19211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATTAAACGCTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	97153663	97149168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_97149301_97150260_97150365_97152730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021465	chr6	-	723	1	ISM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	20841	327	20841	10	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATATCAATAATAGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	97161680	97160957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_97161000_97161700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021466	chr6	-	717	2	ISM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	20250	199	20163	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAACAGTATTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	97162358	97161166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_97161827_97162301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021467	chr6	+	1443	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCTATATGGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	97187649	97210277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_97187958_97206497_97206716_97209360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021468	chr6	+	967	3	NNC	ENSMUSG00000035199.7	novel	1442	3	NA	NA	210	-269	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGGCACCTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	97187859	97210007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_97187958_97206497_97206720_97209360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021469	chr6	+	1141	3	NNC	ENSMUSG00000035199.7	novel	1442	3	NA	NA	241	-58	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCTGTAACTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	97187890	97210218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_97187958_97206497_97206714_97209360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021470	chr6	+	924	1	Genic_Genomic	ENSMUSG00000035199.7	novel	NA	NA	NA	NA	21704	1	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCTATATGGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	97209353	97210277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_97209400_97210300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021471	chr6	-	1978	1	ISM	ENSMUSG00000030067.18	ENSMUST00000113326.9	7029	18	339200	0	100943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTAAGTTTTTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	98904276	98902298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_98902300_98904300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021472	chr6	-	352	1	ISM	ENSMUSG00000030067.18	ENSMUST00000113326.9	7029	18	336701	4125	98444	3	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAATGTATTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98906775	98906423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_98906400_98906800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021473	chr6	-	595	4	ISM	ENSMUSG00000030067.18	ENST00000648426.1	2142	16	221923	-54	87152	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGTCAAAAGTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	98918067	98906949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021474	chr6	-	306	3	ISM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	82831	11446	82830	-11446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTCCGCCATGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	98922389	98918496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_98918619_98921579_98921682_98922307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021475	chr6	-	325	3	ISM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	24928	35937	24927	-35937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCCACATTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	98980292	98942987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_98943076_98955093_98955199_98980160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021476	chr6	-	304	2	ISM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	18203	73164	18202	-73164	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGCATGCCTCTACCAATG	NA	NA	NA	NA	NA	NA	NA	NA	98987017	98980214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_98980366_98986864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021477	chr6	-	307	3	ISM	ENSMUSG00000030067.18	ENSMUST00000177437.8	2468	15	13	85958	13	-85334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGAATGATACATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	99005206	98992384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_98992472_98993488_98993627_99005124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021478	chr6	-	276	1	ISM	ENSMUSG00000093661.2	ENST00000295612.7	2593	9	66864	11	41361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGGCTCATGTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	99602371	99602095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_99602100_99602400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021479	chr6	-	380	2	ISM	ENSMUSG00000093661.2	ENSMUST00000032151.3	2515	7	34360	1694	34360	-1694	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGGTTTCTGCCATCGTA	NA	NA	NA	NA	NA	NA	NA	NA	99609372	99603789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_99604015_99609217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021480	chr6	-	334	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	368	-183	368	183	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCATTTAAATCCAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99854927	99854593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_99854600_99854900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021481	chr6	-	437	1	Genic_Genomic	ENSMUSG00000035378.18	novel	NA	NA	NA	NA	102448	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCTTTATACTGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	100545652	100545215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_100545200_100545700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021482	chr6	-	682	1	ISM	ENSMUSG00000035378.18	ENSMUST00000113312.9	6816	11	97395	4825	97377	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGTGTAAATAATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	100550723	100550041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_100550000_100550700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021483	chr6	+	1714	4	ISM	ENSMUSG00000052144.9	ENST00000356692.10	4770	10	31050	2454	31050	-2454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTCTGAACACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	100841656	100844433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_100841715_100842034_100842179_100842748_100843045_100843217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021484	chr6	+	2481	2	ISM	ENSMUSG00000052144.9	ENST00000356692.10	4770	10	33483	245	33483	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTTAATCATGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	100844089	100846642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_100845343_100845414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021485	chr6	+	1918	1	ISM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	34395	0	34371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTGTGGAATTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	100844977	100846895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_100845000_100846900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021486	chr6	+	2010	1	FSM	ENSMUSG00000107696.2	ENSMUST00000203701.2	2109	1	99	0	99	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTGTCACATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	101515812	101517822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_101515800_101517800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021487	chr6	+	439	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	75709	212837	75709	-212684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTGTGTGGGGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	104545917	104627525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104546055_104619857_104619985_104627350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021488	chr6	+	402	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	149646	162144	149646	-161991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTATGGGTAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	104619854	104678218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104619985_104627350_104627527_104678122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021489	chr6	+	443	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	157140	137160	157140	-137007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCACCTACGCCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	104627348	104703202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104627527_104678122_104678219_104703033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021490	chr6	+	430	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	232876	95519	232876	-95366	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTATGGTGAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	104703084	104744843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104703238_104705226_104705330_104744669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021491	chr6	+	395	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	235053	90708	235053	-90555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGATGTTAGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	104705261	104749654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104705330_104744669_104744855_104749512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021492	chr6	+	450	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	274461	88806	274461	-88653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGTCATTCATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	104744669	104751556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104744855_104749512_104749650_104751428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021493	chr6	+	537	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	279313	58955	279313	-58802	internal_fragment	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCTGTTGTTCTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	104749521	104781407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104749650_104751428_104751559_104753262_104753414_104781279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021494	chr6	+	412	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	283085	30740	283085	-30587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTGGGGGAGTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	104753293	104809622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104753414_104781279_104781408_104809458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021495	chr6	+	425	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	311069	30256	311069	-30103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGCAGAAATGAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	104781277	104810106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104781408_104809458_104809635_104809987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021496	chr6	+	456	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	342447	17520	342447	-17367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGATGGTAAGCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	104812655	104822842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104812815_104815715_104815787_104822616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021497	chr6	+	540	3	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	352406	15197	352406	-15044	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTCACCATAAACC	NA	NA	NA	NA	NA	NA	NA	NA	104822614	104825165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104822852_104822985_104823102_104824978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021498	chr6	+	549	4	ISM	ENSMUSG00000030092.15	ENSMUST00000162872.2	3467	24	352776	1466	352776	-1313	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGCAGTGAGGAAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	104822984	104838896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104823102_104824978_104825166_104836339_104836453_104838764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021499	chr6	+	666	3	ISM	ENSMUSG00000030092.15	ENST00000446702.7	3565	23	366203	17	366131	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAACCACCTCAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	104836339	104840471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_104836453_104838764_104838934_104840087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021500	chr6	+	406	1	Genic_Genomic	ENSMUSG00000030092.15	novel	NA	NA	NA	NA	369879	5	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAGATATGAGACAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	104840087	104840493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_104840100_104840500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021501	chr6	+	1688	5	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	6951	-1	6951	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCGTTATTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	106753077	106759436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021502	chr6	-	863	1	Genic_Genomic	ENSMUSG00000005362.15	novel	NA	NA	NA	NA	19004	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCCTTAATGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	106758022	106757159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_106757200_106758000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021503	chr6	-	1061	3	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	17538	46	17538	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTGAAAAGTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	106759488	106757207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_106758072_106758663_106758796_106759423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021504	chr6	+	1539	1	ISM	ENSMUSG00000034648.10	ENSMUST00000049285.10	3700	2	38908	0	38908	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGCAATAATGTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	107545636	107547175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_107545600_107547200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021505	chr6	+	404	3	ISM	ENSMUSG00000030102.12	ENST00000544951.6	2799	20	304224	30873	304224	-30873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTGTCCCACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	108494482	108496412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108494580_108495650_108495791_108496245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021506	chr6	+	365	1	ISM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	336872	777	336670	8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTAATAGCGAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	108526928	108527293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108526900_108527300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021507	chr6	+	810	2	ISM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	1904	1749	1659	-1749	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCCAGCTTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	108639493	108642137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108639606_108641439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021508	chr6	+	742	1	ISM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	5555	0	5310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGCTGGATTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108643144	108643886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108643100_108643900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021509	chr6	+	1932	3	ISM	ENSMUSG00000030105.9	ENSMUST00000204483.2	695	7	23353	-1527	23353	1527	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAAGTTCTTGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	108795210	108800261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108795274_108795503_108795575_108798463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021510	chr6	+	1853	1	ISM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	40327	0	28529	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGCCTCCTGTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108800386	108802239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108800400_108802200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021511	chr6	+	215	2	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	14350	14382	14350	-14382	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCCTCTGGAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	108819984	108821927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108820060_108821787
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021512	chr6	+	219	2	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	16191	12604	16191	-12604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAGTACCTCTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	108821825	108823705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108821972_108823632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021513	chr6	+	227	2	ISM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	20066	9818	20066	-9818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCTAGTGGAGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	108825700	108826491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_108825792_108826355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021514	chr6	+	200	1	Genic_Genomic	ENSMUSG00000030104.10	novel	NA	NA	NA	NA	30476	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCACTGTGTTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	108836110	108836310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_108836100_108836300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021515	chr6	+	1384	5	FSM	ENSMUSG00000057604.10	ENST00000397386.7	1383	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACACAACACTTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	112250802	112307380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_112250934_112282009_112282099_112292536_112292873_112305623_112305840_112306768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021516	chr6	+	498	2	ISM	ENSMUSG00000057604.10	ENSMUST00000032376.6	1730	6	36740	14596	36655	-14590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAAAAGCCAGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	112287458	112292790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_112287703_112292536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021517	chr6	+	351	1	Genic_Genomic	ENSMUSG00000057604.10	novel	NA	NA	NA	NA	56235	3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTATCTCGTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	112307038	112307389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_112307000_112307400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021518	chr6	-	450	4	ISM	ENSMUSG00000034387.14	ENST00000544814.6	1083	11	7971	0	7971	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGATAGGCACAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	112353447	112346662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112346804_112351739_112351848_112352513_112352620_112353352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021519	chr6	+	340	1	ISM	ENSMUSG00000062694.8	ENSMUST00000075477.8	1157	2	13028	0	13028	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGGATCACTATGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	112449493	112449833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_112449500_112449800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021520	chr6	-	191	1	ISM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	15070	61576	14988	1	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCTAGGAAAGCCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	112658577	112658386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112658400_112658600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021521	chr6	-	305	3	ISM	ENSMUSG00000030254.17	ENST00000418463.5	525	4	3112	101	3051	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACTGGTGACTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	112670514	112658488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112658638_112663676_112663748_112670429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021522	chr6	-	258	3	ISM	ENSMUSG00000030254.17	ENST00000418463.5	525	4	0	5306	0	-5306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGAATTTTGCACGGTA	NA	NA	NA	NA	NA	NA	NA	NA	112673626	112663693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112663748_112670429_112670512_112673504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021523	chr6	-	414	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	90214	0	90214	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAGCACAGAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	112716385	112712794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112712875_112715843_112716072_112716279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021524	chr6	-	512	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	88141	3116	88141	-3116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGCCCTCGGGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	112718458	112715910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112716072_112716279_112716386_112718213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021525	chr6	-	415	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	82661	3505	82661	-3505	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGCTTTCCTCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	112723938	112716299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112716386_112718213_112718457_112723852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021526	chr6	-	362	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	80224	5431	80224	-5431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATGAACAAAGTATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	112726375	112718225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112718457_112723852_112723931_112726322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021527	chr6	-	398	4	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	61117	18742	61117	-18742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTACTTGCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	112745482	112731536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112731635_112736709_112736738_112743828_112743914_112745295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021528	chr6	-	478	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	58072	31028	58072	-31028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTGGAGAGCCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	112748527	112743822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112743914_112745295_112745483_112748327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021529	chr6	-	359	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	55937	32631	55937	-32631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCACTCAGTGGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	112750662	112745425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112745483_112748327_112748526_112750558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021530	chr6	-	462	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	53918	35593	53918	-35593	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAACATCGCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	112752681	112748387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112748526_112750558_112750661_112752459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021531	chr6	-	457	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	52488	37762	52488	-37762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGCTGCTACCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	112754111	112750556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112750661_112752459_112752682_112753980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021532	chr6	-	435	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	48580	39767	48580	-39767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGACTCCCGGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	112758019	112752561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112752682_112753980_112754110_112757833
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021533	chr6	-	355	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	33819	41193	33819	-41193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGATGTGAGCAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	112772780	112753987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112754110_112757833_112758020_112772733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021534	chr6	-	405	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	12892	45039	12892	-45039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAGAGGAATGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	112793707	112757833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112758020_112772733_112772797_112793551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021535	chr6	-	417	3	ISM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	11	59937	11	-59937	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTACCCAGAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	112806588	112772731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_112772797_112793551_112793715_112806399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021536	chr6	-	757	1	ISM	ENSMUSG00000086429.10	ENSMUST00000124246.4	1181	2	6056	0	6037	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	113048115	113047358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113047400_113048100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021537	chr6	-	853	2	FSM	ENSMUSG00000086429.10	ENSMUST00000124246.4	1181	2	27	301	8	-301	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAGGGAAATAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	113054144	113047659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_113048397_113054028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021538	chr6	-	371	1	ISM	ENSMUSG00000042873.12	ENSMUST00000162280.2	4762	4	24309	2615	24276	1	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATGTGTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	113148036	113147665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113147700_113148000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021539	chr6	-	946	3	NNC	ENSMUSG00000042873.12	novel	4762	4	NA	NA	1183	-899	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTGTGTAGACTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	113171129	113148565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_113148920_113153402_113153644_113170778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021540	chr6	-	463	2	ISM	ENSMUSG00000042873.12	ENST00000287585.8	2197	4	1	23355	1	-23355	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGCTACTTCGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	113172311	113171021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113171349_113172175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021541	chr6	+	497	4	ISM	ENSMUSG00000030269.15	ENST00000420925.5	1410	9	14	14862	12	-3224	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTCAAGGAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	113214815	113243297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113215083_113242404_113242472_113242930_113243017_113243220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021542	chr6	+	366	5	FSM	ENSMUSG00000030269.15	ENST00000584299.1	365	5	-1	0	-1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTCCTGTCCCTAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	113232806	113246521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113232900_113233983_113234058_113237548_113237620_113238166_113238235_113246461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021543	chr6	+	780	4	ISM	ENSMUSG00000030269.15	ENST00000420925.5	1410	9	30785	84	12779	-84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTCCTGGGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	113245586	113258075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113245657_113246461_113246521_113246692_113246832_113257563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021544	chr6	+	904	2	ISM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	39992	-3	21988	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTCCCCATCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	113254795	113258356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113254907_113257563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021545	chr6	+	535	1	ISM	ENSMUSG00000030269.15	ENST00000353332.9	2346	18	42840	1	24817	0	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCATTAGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	113257624	113258159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113257600_113258200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021546	chr6	+	637	3	ISM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	184	4778	184	-4778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGGTGCATCCGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	113304116	113306371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113304324_113305325_113305574_113306189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021547	chr6	+	577	3	FSM	ENSMUSG00000030271.15	ENST00000383826.9	575	3	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCATGACCACCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	113305323	113317449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113305574_113306189_113306370_113317302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021548	chr6	+	550	3	ISM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	1454	2235	62	-2235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGTCCAGAGAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	113305386	113308914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113305574_113306189_113306370_113308731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021549	chr6	+	513	3	ISM	ENSMUSG00000030271.15	ENST00000349503.9	757	4	860	0	860	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGTCATGACCACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	113306184	113317448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113306370_113308731_113308914_113317302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021550	chr6	+	501	3	ISM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	6417	0	5025	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	113310349	113311149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113310454_113310591_113310642_113310802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021551	chr6	-	256	1	Genic_Genomic	ENSMUSG00000048930.13	novel	NA	NA	NA	NA	11099	3	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTATCTATCTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	113343238	113342982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_113343000_113343200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021552	chr6	-	268	2	ISM	ENSMUSG00000048930.13	ENSMUST00000043333.9	1708	10	7112	301	7112	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAGTCCACAACATCCT	NA	NA	NA	NA	NA	NA	NA	NA	113347225	113343916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113344142_113347182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021553	chr6	-	255	2	ISM	ENSMUSG00000048930.13	ENSMUST00000043333.9	1708	10	6370	3566	6370	-3566	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGAGGAGTGCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	113347967	113347181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113347369_113347899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021554	chr6	-	347	3	ISM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	2679	6537	2172	-5907	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGCTGGAGGAGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	113352165	113349522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113349568_113351739_113351846_113351969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021555	chr6	-	352	2	ISM	ENSMUSG00000048930.13	ENSMUST00000043333.9	1708	10	1407	8383	1407	-8383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATCCCCAAGAATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	113352930	113351998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113352221_113352800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021556	chr6	-	330	2	ISM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	374	9904	8	-9274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGAGCTGGACACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	113354470	113352889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113353026_113354276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021557	chr6	+	425	4	ISM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	0	6267	0	-4834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGTGCTCTGGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	113355075	113361142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021558	chr6	+	1304	5	FSM	ENSMUSG00000079426.14	ENSMUST00000203578.3	1323	5	20	-1	20	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTGCTCTGTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	113355127	113366614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113355170_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021559	chr6	+	306	4	ISM	ENSMUSG00000079426.14	ENSMUST00000204802.2	794	6	2208	3495	2208	-3495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACACGGAGCAGATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	113357738	113362481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113357806_113358923_113359036_113361042_113361139_113362450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021560	chr6	+	271	2	ISM	ENSMUSG00000079426.14	ENSMUST00000204802.2	794	6	5501	3362	5501	-3362	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAATGTGAGTAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	113361031	113362614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113361139_113362450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021561	chr6	+	298	3	NNC	ENSMUSG00000079426.14	novel	695	4	NA	NA	5570	-150	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCAGCAGCAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	113361100	113365826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_113361133_113362450_113362622_113365731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021562	chr6	+	322	1	Genic_Genomic	ENSMUSG00000079426.14	novel	NA	NA	NA	NA	11563	6	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCTTTTTGGATAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	113367093	113367415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_113367100_113367400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021563	chr6	-	956	6	FSM	ENSMUSG00000051169.15	ENST00000433535.6	927	6	1	-30	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACCAAGGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113394902	113392279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394369_113394803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021564	chr6	-	406	1	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	2218	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACCAAGGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113392685	113392279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_113392300_113392700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021565	chr6	-	574	5	NIC	ENSMUSG00000051169.15	novel	644	6	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACAGTAGACTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	113394880	113392503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_113392684_113393749_113393874_113394101_113394187_113394264_113394373_113394803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021566	chr6	-	600	5	ISM	ENSMUSG00000051169.15	ENST00000424438.5	644	6	128	0	-7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACAGTAGACTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	113394910	113392503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113392684_113393749_113393874_113394101_113394187_113394264_113394369_113394803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021567	chr6	-	305	2	FSM	ENSMUSG00000030278.12	ENST00000505910.1	304	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACTGCTACAAGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	113405491	113405113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_113405260_113405332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021568	chr6	-	298	2	NNC	ENSMUSG00000030278.12	novel	304	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCACTGCTACAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	113405490	113405114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_113405255_113405332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021569	chr6	+	1207	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	-5	-1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGTTGGAGATTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	113419524	113425191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113419759_113424218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021570	chr6	+	856	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	17	274	17	-273	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGCTGTGACACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	113419587	113424896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113419766_113424218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021571	chr6	+	1162	2	FSM	ENSMUSG00000051256.11	ENST00000489724.2	1152	2	-5	-5	-5	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGACTGTCCTGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	113419661	113425174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113419759_113424109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021572	chr6	+	813	1	ISM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	4831	17	4694	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAAGACTGTCCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	113424360	113425173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113424400_113425200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021573	chr6	+	700	3	ISM	ENSMUSG00000043088.17	ENST00000454190.6	1467	11	6010	-4	6010	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTGCTTGAAAAACCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	113445796	113446996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113445919_113445990_113446090_113446517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021574	chr6	+	477	1	NIC	ENSMUSG00000043088.17	novel	2940	15	NA	NA	6729	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGGTGCTTGAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	113446515	113446992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_113446500_113447000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021575	chr6	+	730	3	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	9754	65	9754	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGAGGAATGGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	113458141	113460036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113458197_113459243_113459340_113459457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021576	chr6	+	636	1	ISM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	11078	0	11078	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	113459465	113460101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113459500_113460100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021577	chr6	+	903	3	ISM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	72	5156	72	-5156	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTGGGAGGGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	113460329	113465143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113461038_113461455_113461539_113465031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021578	chr6	-	951	1	ISM	ENSMUSG00000045009.10	ENSMUST00000204268.3	3741	4	6638	656	6573	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGCACCTACGGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	113472206	113471255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113471300_113472200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021579	chr6	-	1035	2	ISM	ENSMUSG00000045009.10	ENST00000412055.6	3064	4	4951	794	4829	-794	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGGCGTGCCCCGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	113473950	113472049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113473027_113473892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021580	chr6	-	146	1	NIC	ENSMUSG00000045009.10	novel	3741	4	NA	NA	4774	3	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAACCTGTGCTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	113474005	113473859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_113473900_113474000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021581	chr6	-	1035	2	ISM	ENSMUSG00000045009.10	ENST00000411976.2	1306	3	3727	77	3622	-77	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGCTGCAAATGGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	113475157	113473939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113474046_113474228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021582	chr6	-	198	2	ISM	ENSMUSG00000045009.10	ENST00000411976.2	1306	3	3	1288	3	-1288	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGGGCAGAGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	113478881	113475150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113475278_113478810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021583	chr6	-	529	1	Genic_Genomic	ENSMUSG00000030286.7	novel	NA	NA	NA	NA	16251	1	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTCTGTGGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	113492362	113491833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_113491800_113492400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021584	chr6	-	725	4	ISM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	11682	652	11682	-652	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCCAAACACCCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	113496931	113492486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021585	chr6	-	513	2	NNC	ENSMUSG00000030286.7	novel	1985	8	NA	NA	14472	-725	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTGTCAGTTATAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	113494141	113492559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_113492989_113494057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021586	chr6	+	674	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	0	421	0	-421	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGTGGTTGCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	113581732	113593491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113581858_113592736_113592820_113593025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021587	chr6	+	488	1	ISM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	11692	0	11692	0	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTTATGATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	113593424	113593912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113593400_113593900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021588	chr6	+	2518	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	33	241	33	-241	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTATTGAAACATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	113600952	113608353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_113601340_113605052_113605176_113606345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021589	chr6	+	2043	1	ISM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	5632	0	5632	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGTGTTGTGTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	113606551	113608594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113606600_113608600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021590	chr6	+	455	2	ISM	ENSMUSG00000060477.15	ENSMUST00000089022.9	2974	12	48229	3974	48229	-2763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGCTTGCACAGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	113663717	113667996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113663920_113667743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021591	chr6	+	427	1	ISM	ENSMUSG00000060477.15	ENSMUST00000059286.14	3196	13	56133	0	56072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGGGTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	113671560	113671987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_113671600_113672000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021592	chr6	-	171	2	FSM	ENSMUSG00000064177.9	ENST00000439975.6	168	2	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCAATCTGAAATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	113698281	113694012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_113694123_113698220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021593	chr6	-	111	1	NIC	ENSMUSG00000064177.9	novel	323	3	NA	NA	530	1	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCAATCTGAAATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	113694123	113694012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_113694000_113694100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021594	chr6	-	362	3	NNC	ENSMUSG00000064177.9	novel	891	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAATCTGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	113696414	113694013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_113694123_113696066_113696188_113696282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021595	chr6	-	614	4	ISM	ENSMUSG00000064177.9	ENSMUST00000064993.8	527	5	-238	934	-238	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAATCTGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	113697079	113694013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113694123_113696070_113696188_113696282_113696416_113696824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021596	chr6	-	673	5	FSM	ENSMUSG00000064177.9	ENST00000430179.5	675	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAATCTGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	113698277	113694013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_113694123_113696070_113696185_113696282_113696416_113696824_113697085_113698220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021597	chr6	-	559	4	NNC	ENSMUSG00000064177.9	novel	675	5	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAATCTGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	113697023	113694013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_113694123_113696066_113696185_113696282_113696416_113696824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021598	chr6	-	231	3	FSM	ENSMUSG00000064177.9	ENST00000449238.6	285	3	0	54	0	-54	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCGGGCCCTGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	113698279	113694067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_113694123_113696070_113696188_113698220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021599	chr6	-	951	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	6057	-3	6057	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCCCACACAGTGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	113711647	113705019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021600	chr6	-	405	1	Genic_Genomic	ENSMUSG00000030298.11	novel	NA	NA	NA	NA	12278	1	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATCCCACACAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	113705426	113705021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_113705000_113705400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021601	chr6	-	667	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	4256	2266	4256	-2266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCTATTTTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	113713448	113707288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021602	chr6	-	498	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	2744	2796	2744	-2796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGACCAACCATCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	113714960	113707818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021603	chr6	-	537	5	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	9	6484	9	-6484	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCAGCCCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	113717695	113711506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021604	chr6	+	170	2	ISM	ENSMUSG00000030310.11	ENST00000642201.1	2025	15	19249	12996	245	-12995	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGGCCTGGGCGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	114279068	114279550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_114279149_114279460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021605	chr6	+	162	2	ISM	ENSMUSG00000030310.11	ENSMUST00000204074.2	1740	13	8676	3674	8676	-3674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCCATCCCCGCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	114287499	114288871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_114287556_114288765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021606	chr6	+	1041	2	ISM	ENSMUSG00000030314.17	ENSMUST00000182428.8	2264	18	133841	-691	133841	-691	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTACTTTTAAGTACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	114753930	114836882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_114754041_114835951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021607	chr6	+	1007	1	Genic_Genomic	ENSMUSG00000030314.17	novel	NA	NA	NA	NA	216482	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTTTCCTACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	114836571	114837578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_114836600_114837600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021608	chr6	-	877	4	FSM	ENSMUSG00000030315.16	ENST00000451674.6	873	4	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGCAACAGAACAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	114852087	114838928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_114839398_114839716_114839841_114840844_114841041_114851999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021609	chr6	-	833	4	NNC	ENSMUSG00000030315.16	novel	873	4	NA	NA	37	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGGCAACAGAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	114852047	114838929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_114839398_114839719_114839841_114840844_114841041_114851999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021610	chr6	-	862	4	NNC	ENSMUSG00000030315.16	novel	873	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGGCAACAGAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	114852078	114838929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_114839398_114839716_114839841_114840844_114841041_114852004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021611	chr6	-	869	4	NNC	ENSMUSG00000030315.16	novel	873	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGGCAACAGAACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	114852076	114838929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_114839398_114839716_114839841_114840844_114841041_114851995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021612	chr6	-	382	3	ISM	ENSMUSG00000030315.16	ENST00000424529.6	749	4	-2	688	-2	-688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACCGGAGACCACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	114843233	114839738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_114839841_114840844_114841041_114843149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021613	chr6	-	385	2	ISM	ENSMUSG00000030315.16	ENSMUST00000032459.14	2028	5	31013	2463	-15685	-1797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTATGTATATGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	114867769	114840847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_114841041_114867577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021614	chr6	-	268	2	ISM	ENSMUSG00000030315.16	ENSMUST00000032459.14	2028	5	307	29313	307	-28647	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGCCCGCCTCCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	114898475	114867697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_114867768_114898277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021615	chr6	-	288	2	FSM	ENSMUSG00000030316.14	ENST00000273037.9	283	2	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGCTTTTTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	114989289	114981363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_114981481_114989118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021616	chr6	-	287	2	NNC	ENSMUSG00000030316.14	novel	283	2	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCATGCTTTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	114989287	114981364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_114981481_114989116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021617	chr6	-	118	1	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	7804	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCATGCTTTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	114981482	114981364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_114981400_114981500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021618	chr6	-	707	5	ISM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	2741	7811	2741	-7787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACCCCGACTGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	115012096	114989152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021619	chr6	+	1067	5	FSM	ENSMUSG00000000440.13	ENST00000397000.6	1063	5	3	-7	3	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTGTGAAAAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	115416802	115467240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115466908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021620	chr6	+	866	2	ISM	ENSMUSG00000000440.13	ENSMUST00000000450.5	1767	7	50832	0	33059	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTATAGTATTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	115449858	115467360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_115450273_115466908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021621	chr6	+	700	4	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	3296	18526	3296	5830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGATCAAAGTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115524920	115537063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_115524992_115526873_115526956_115530951_115530989_115536553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021622	chr6	+	595	6	FSM	ENSMUSG00000042389.14	ENST00000444864.6	591	6	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTCCCACCTCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	115542835	115562610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553949_115562448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021623	chr6	+	575	5	NNC	ENSMUSG00000042389.14	novel	591	6	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCCTCCCACCTCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	115542843	115562610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_115542889_115545656_115545800_115552801_115552935_115553856_115553949_115562448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021624	chr6	+	478	5	ISM	ENSMUSG00000042389.14	ENST00000679367.1	580	7	7290	-1	2816	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTTTTAAAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115545654	115562843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_115545796_115551523_115551561_115552822_115552935_115553856_115554020_115562818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021625	chr6	+	721	2	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	32247	52	11033	-52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAATATGCCGGAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	115553871	115555537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_115553947_115554891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021626	chr6	+	702	1	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	12049	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTCCGACCGGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115554887	115555589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_115554900_115555600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021627	chr6	-	580	1	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	56816	0	56816	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGCAGTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115596109	115595529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_115595500_115596100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021628	chr6	-	760	3	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	56073	323	56073	-302	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCCTGCTTTGGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	115596852	115595852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_115596371_115596519_115596655_115596745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021629	chr6	-	433	4	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	54102	990	54102	-969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAGAGCTCAGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	115598823	115596519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_115596655_115596745_115596878_115597169_115597289_115598776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021630	chr6	-	547	5	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	52420	1225	52420	-1204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGACCAGGTGATCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	115600505	115596754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021631	chr6	+	2241	1	ISM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	18482	0	18482	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACCTACACAAAGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	115597344	115599585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_115597300_115599600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021632	chr6	-	379	3	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	49556	4309	49556	-4288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGTACACGGTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	115603369	115599838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_115600015_115600424_115600510_115603251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021633	chr6	-	327	3	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	40917	14328	40917	-14307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGTTGTACTTTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	115612008	115609857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_115609957_115611513_115611672_115611938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021634	chr6	-	347	3	ISM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	38255	16009	38255	-15988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGAGTAATATCAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	115614670	115611538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_115611672_115611938_115612042_115614559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021635	chr6	-	670	3	ISM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	-36	19003	-36	-19003	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCAGCCAGCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	115653514	115614553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_115614673_115621370_115621604_115653196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021636	chr6	-	324	2	NNC	ENSMUSG00000000441.18	novel	2946	17	NA	NA	31347	-19003	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCCAGCCAGCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	115621578	115614553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_115614673_115621373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021637	chr6	+	1393	1	FSM	ENSMUSG00000107994.2	ENSMUST00000203858.2	1813	1	422	-2	422	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTAGTTTCTCACTAG	NA	NA	NA	NA	NA	NA	NA	NA	115653350	115654743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_115653400_115654700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021638	chr6	-	395	6	FSM	ENSMUSG00000059900.15	ENST00000435218.6	385	6	-6	-4	-6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCGCACGTTTCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	115718544	115707391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115711045_115718501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021639	chr6	-	526	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	-8	-1	-8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGTTTTTGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	115785716	115782464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021640	chr6	-	509	4	NNC	ENSMUSG00000057841.6	novel	517	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATGTTTTTGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	115785708	115782464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_115782650_115783955_115784129_115784762_115784864_115785658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021641	chr6	-	899	3	FSM	ENSMUSG00000057841.6	ENSMUST00000203816.2	906	3	8	-1	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTATTTTCTATGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	115785301	115782471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_115782650_115783946_115784129_115784762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021642	chr6	+	545	2	Genic_Genomic	ENSMUSG00000101878.2	novel	387	1	NA	NA	-91	136	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTAGCCTTCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	116150606	116151220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_116150893_116150961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021643	chr6	+	377	1	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	116151098	116151475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr6_+_116151100_116151500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021644	chr6	+	286	2	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	168	53571	168	-53571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAGTTGTTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	116185166	116186076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116185291_116185914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021645	chr6	+	234	2	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	8006	44879	8006	-44879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGATGTAGGGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	116193004	116194768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116193181_116194710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021646	chr6	+	243	3	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	12496	39441	12496	-39441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGGTAAGTCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	116197494	116200206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116197606_116198776_116198859_116200156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021647	chr6	+	253	2	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	18385	35152	18385	-35152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCACTTTTAGGCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	116203383	116204495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116203448_116204306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021648	chr6	+	253	2	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	30130	21083	30130	-21083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTATTGCAAAGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	116215128	116218564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116215225_116218407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021649	chr6	+	243	2	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	36550	16441	36550	-16441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATAGCACAGAAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	116221548	116223206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116221654_116223068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021650	chr6	+	283	2	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	38108	14543	38108	-14543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGGACGGGAGAAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	116223106	116225104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116223222_116224936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021651	chr6	+	262	3	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	46050	7588	46050	-7588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAGGACCCTCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	116231048	116232059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116231180_116231373_116231455_116232009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021652	chr6	+	235	2	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	48578	4023	48578	-4023	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGAGACCTCAGACCCGT	NA	NA	NA	NA	NA	NA	NA	NA	116233576	116235624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116233790_116235602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021653	chr6	+	262	2	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	52492	229	52492	-229	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCGGAAGCCAGTAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	116237490	116239418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116237630_116239295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021654	chr6	+	221	1	Genic_Genomic	ENSMUSG00000024104.12	novel	NA	NA	NA	NA	54430	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGTGCATGGAAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	116239428	116239649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_116239400_116239600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021655	chr6	-	644	1	ISM	ENSMUSG00000025701.13	ENSMUST00000026795.13	2821	14	50458	0	50304	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGAATTTATGCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	116387681	116387037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_116387000_116387700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021656	chr6	-	897	3	ISM	ENSMUSG00000025701.13	ENSMUST00000026795.13	2821	14	47955	198	47801	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATACCACATGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	116390184	116387235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_116387860_116389420_116389592_116390082
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021657	chr6	-	705	1	Genic_Genomic	ENSMUSG00000059878.13	novel	NA	NA	NA	NA	3986	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGCCAATGTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	116601676	116600971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_116601000_116601700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021658	chr6	-	1208	1	ISM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	2888	888	2590	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGGAAATTGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116603072	116601864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_116601900_116603100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021659	chr6	-	1271	2	FSM	ENSMUSG00000059878.13	ENSMUST00000057540.6	2375	2	110	994	110	-994	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGACATAGTAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	116605773	116602858	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_116604095_116605738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021660	chr6	+	1339	2	FSM	ENSMUSG00000048489.13	ENSMUST00000067354.10	1339	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAATTTTGTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	116627569	116629755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_116627807_116628653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021661	chr6	+	812	1	ISM	ENSMUSG00000048489.13	ENSMUST00000067354.10	1339	2	1374	0	1355	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAATTTTGTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	116628943	116629755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_116628900_116629800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021662	chr6	+	482	3	FSM	ENSMUSG00000061353.12	ENSMUST00000112866.8	1878	3	106	1290	64	-1290	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCCCTGCCCTCGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	117145601	117150740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117145678_117148442_117148561_117150452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021663	chr6	+	305	1	Genic_Genomic	ENSMUSG00000061353.12	novel	NA	NA	NA	NA	6189	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGTGCACATACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	117151726	117152031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_117151700_117152000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021664	chr6	+	1231	1	FSM	ENSMUSG00000104222.2	ENSMUST00000194706.2	2527	1	1318	-22	1318	22	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACAGATTGTGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	117694620	117695851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117694600_117695900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021665	chr6	+	1099	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	0	-1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	117818202	117822917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117818230_117820213_117820354_117821985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021666	chr6	+	1070	3	FSM	ENSMUSG00000059689.16	ENSMUST00000112860.2	1231	3	35	126	35	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTTTACCCAGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	117818276	117822791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117818359_117820213_117820354_117821943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021667	chr6	+	1110	3	ISM	ENSMUSG00000059689.16	ENSMUST00000112861.8	1202	4	810	21	775	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTCCTGTTTATCATT	NA	NA	NA	NA	NA	NA	NA	NA	117819016	117822896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_117819076_117820213_117820354_117821985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021668	chr6	+	859	1	Genic_Genomic	ENSMUSG00000059689.16	novel	NA	NA	NA	NA	3818	1	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTATTTTTCATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	117822059	117822918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_117822100_117822900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021669	chr6	+	2811	4	FSM	ENSMUSG00000042097.18	ENSMUST00000172088.8	2812	4	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCCAATGTGTTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	117840039	117849727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117840104_117843355_117843536_117846178_117846235_117847216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021670	chr6	+	2271	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	1	-1	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	117877301	117902583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021671	chr6	+	896	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	1	1250	1	-1250	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCCTGGGCCTTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	117883756	117901330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021672	chr6	+	1201	3	FSM	ENSMUSG00000042079.14	ENSMUST00000163168.9	2401	3	21	1179	21	-1179	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGGATGAGGTCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	117883830	117901401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117884170_117894430_117894560_117900668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021673	chr6	+	1454	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	20	806	20	-804	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGATACATAGAACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117894274	117901776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117894560_117896059_117896121_117900668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021674	chr6	+	1855	1	FSM	ENSMUSG00000042079.14	ENSMUST00000180341.2	1922	1	68	-1	68	1	mono-exon	FALSE	NA	NA	NA	NA	NA	472	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACAGCTTATGTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	117900729	117902584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_117900700_117902600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021675	chr6	-	449	1	ISM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	31240	0	31240	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	118084861	118084412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118084400_118084900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021676	chr6	-	728	4	ISM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	18043	1545	18043	-1545	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTCTGAAATGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	118098058	118085957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021677	chr6	-	481	2	ISM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	10128	18724	10128	-18724	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCACTTGCGGAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	118105973	118103136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118103300_118105655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021678	chr6	-	1054	1	ISM	ENSMUSG00000030110.14	ENSMUST00000032201.8	5456	20	44247	88	44247	4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATACCGTGTTGACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	118129847	118128793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118128800_118129800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021679	chr6	-	1050	2	ISM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	33948	-81	33846	80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGTCACAGGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	118140248	118131446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118132397_118140148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021680	chr6	-	188	1	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	7515	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTGGTTGGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	118365725	118365537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_118365500_118365700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021681	chr6	-	304	2	ISM	ENSMUSG00000030138.9	ENST00000651585.1	1059	6	4995	177	4995	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCACGAGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	118368245	118365715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118365893_118368118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021682	chr6	-	918	6	ISM	ENSMUSG00000030138.9	ENST00000556075.2	1171	8	3844	0	3286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGGTCACGAGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	118369954	118365716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118365893_118366199_118366348_118368078_118368242_118369278_118369338_118369504_118369686_118369763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021683	chr6	-	775	5	ISM	ENSMUSG00000030138.9	ENST00000651585.1	1059	6	-29	2539	-29	-2361	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGTAGCAGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	118373269	118368077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021684	chr6	-	667	5	ISM	ENSMUSG00000030138.9	ENST00000374336.5	1127	8	4358	-1	4286	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGAGTCTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	118390183	118382224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118382302_118384971_118385102_118388442_118388637_118388915_118389038_118390039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021685	chr6	-	780	5	ISM	ENSMUSG00000030138.9	ENST00000374336.5	1127	8	3660	2745	3588	-2745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTCTACCATTTTACTAA	NA	NA	NA	NA	NA	NA	NA	NA	118390881	118384970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118385102_118388442_118388637_118388915_118389038_118390039_118390183_118390691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021686	chr6	-	885	6	ISM	ENSMUSG00000030138.9	ENST00000374336.5	1127	8	33	6220	33	465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTAAGAAGTGCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	118394508	118388445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021687	chr6	-	473	4	FSM	ENSMUSG00000030138.9	ENST00000444180.3	471	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCTAAAGCACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	118394470	118388909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_118389038_118390039_118390183_118393423_118393504_118394348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021688	chr6	-	440	4	NNC	ENSMUSG00000030138.9	novel	471	4	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCTCTAAAGCACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	118394444	118388910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_118389038_118390039_118390183_118393423_118393491_118394341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021689	chr6	-	933	1	ISM	ENSMUSG00000072623.7	ENSMUST00000161170.2	3968	6	14052	2386	2100	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCAAGTTCAGAACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	118442229	118441296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_118441300_118442200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021690	chr6	+	841	3	ISM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	25543	4718	25534	-4718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGAAGGAGCAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	119177782	119192312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_119177913_119183430_119183560_119191730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021691	chr6	+	913	3	ISM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	39728	0	39719	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCACGTAACCAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	119191967	119197030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_119192568_119194694_119194941_119196963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021692	chr6	+	821	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	2142	0	2142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCCCTTGTATCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	119458770	119459591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_119458800_119459600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021693	chr6	+	553	5	FSM	ENSMUSG00000030166.15	ENST00000545564.5	563	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCACGACAGGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	119889973	119892990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021694	chr6	+	552	2	ISM	ENSMUSG00000030166.15	ENSMUST00000162461.7	1693	12	18126	0	7826	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTTTGGCTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119897789	119899784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_119897990_119899432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021695	chr6	+	354	1	NIC	ENSMUSG00000030166.15	novel	1693	12	NA	NA	9467	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTTTGGCTTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119899430	119899784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_119899400_119899800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021696	chr6	-	1069	1	ISM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	32038	0	32038	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	120302352	120301283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120301300_120302400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021697	chr6	-	527	2	ISM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	28249	62	28206	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGGCTATTTAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	120306184	120302057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120302455_120306054
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021698	chr6	+	586	1	ISM	ENSMUSG00000002897.6	ENSMUST00000002976.5	7752	13	23727	0	23727	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGTGTATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	120463934	120464520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_120463900_120464500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021699	chr6	-	863	5	ISM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	18661	0	14269	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	120781093	120772204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021700	chr6	-	286	1	ISM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	27249	15	22857	2	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTTATGTGGATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	120772505	120772219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120772200_120772500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021701	chr6	-	331	4	ISM	ENSMUSG00000019210.11	ENST00000399796.6	1001	7	10749	2604	10749	-2604	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTACGTGTCGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	120784613	120774825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120774926_120778003_120778099_120780268_120780338_120784546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021702	chr6	-	302	4	ISM	ENSMUSG00000019210.11	ENST00000399796.6	1001	7	9928	5823	9928	-5823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCCAGATTGACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	120785434	120778044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120778099_120780268_120780338_120784546_120784614_120785322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021703	chr6	-	261	4	ISM	ENSMUSG00000019210.11	ENST00000399796.6	1001	7	5	8095	5	-8095	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAATGATCGTGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	120795357	120780316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120780338_120784546_120784614_120785322_120785433_120795294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021704	chr6	-	234	3	NNC	ENSMUSG00000019210.11	novel	1001	7	NA	NA	8	-12324	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGCTCCCAGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	120795354	120784545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_120784614_120785322_120785429_120795294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021705	chr6	+	1463	2	ISM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	40054	4757	40054	-4757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTTAAAATGATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	120853252	120865046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_120853308_120863638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021706	chr6	-	404	1	Genic_Genomic	ENSMUSG00000004446.13	novel	NA	NA	NA	NA	23597	1	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCACCAGTTATCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	120870217	120869813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_120869800_120870200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021707	chr6	-	728	3	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	19490	1068	19490	-1068	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCATTAGGAGAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	120874324	120870882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120871254_120872579_120872793_120874180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021708	chr6	-	560	3	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	16485	2771	16485	-2771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACGTAAGAGCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120877329	120872585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120872793_120874180_120874321_120877116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021709	chr6	-	414	3	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	15064	4370	15064	-4370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTAAGTATGACTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	120878750	120874184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120874321_120877116_120877328_120878683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021710	chr6	-	385	3	ISM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	12	7302	12	-7302	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTCCTGGCCTTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	120893802	120877116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_120877328_120878683_120878750_120893694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021711	chr6	-	1410	4	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	30629	9787	30629	-9787	internal_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGGTGGTGCAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	121390570	121366571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_121366593_121366958_121367082_121387572_121387735_121389466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021712	chr6	-	1164	2	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	3	32708	3	-7707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATCGGCCTCAACCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121421196	121389492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_121390576_121421115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021713	chr6	+	624	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	174	4251	174	-4251	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTCCTGCTGACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	122285852	122290388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122286126_122289192_122289373_122290217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021714	chr6	+	314	2	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	190	-5383	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGAATCCTGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	122285868	122289256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_122286119_122289192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021715	chr6	+	396	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	3576	2513	3576	-2513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTGTCCTGGGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	122289254	122292126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122289373_122290217_122290385_122292015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021716	chr6	+	395	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	4537	2261	4537	-2261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTACTTGTCATGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	122290215	122292378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122290385_122292015_122292126_122292262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021717	chr6	+	369	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	6337	1503	6337	-1503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAGCAAAGTTAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	122292015	122293136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122292126_122292262_122292394_122293008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021718	chr6	+	1612	3	ISM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	6583	0	6583	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTTGTCGTTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	122292261	122294639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122292394_122293008_122293136_122293286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021719	chr6	+	337	1	Genic_Genomic	ENSMUSG00000007458.15	novel	NA	NA	NA	NA	8625	1	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGTCGTTTGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	122294303	122294640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_122294300_122294600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021720	chr6	-	503	2	ISM	ENSMUSG00000040669.15	ENSMUST00000081849.10	3683	13	11323	5815	11323	-5242	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCTACTCAGCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	122302651	122300504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122300773_122302416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021721	chr6	-	667	4	ISM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	13490	2457	7238	-2457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCGAGGGGCAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	122436256	122426846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122426952_122429512_122429723_122433476_122433623_122436050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021722	chr6	+	563	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	-41	-51	-41	51	mono-exon	FALSE	NA	NA	NA	NA	NA	1797	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTTCACAATGCAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	122433821	122434384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_122433800_122434400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021723	chr6	-	691	4	ISM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	75	11666	75	-4837	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGGTAAAGATACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	122449671	122436055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122436255_122437919_122438007_122440936_122441168_122449497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021724	chr6	+	170	2	ISM	ENSMUSG00000040627.15	ENST00000537228.5	509	3	1761	0	743	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTGCCTGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	122538186	122538915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122538271_122538829
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021725	chr6	+	448	1	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGGAGAAGGACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122621294	122621742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr6_+_122621300_122621700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021726	chr6	-	162	1	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	14016	759	14016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTCCCTGGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	122705688	122705526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122705500_122705700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021727	chr6	-	518	1	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	12796	1623	12796	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTAATTTTACCAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	122706908	122706390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122706400_122706900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021728	chr6	-	869	4	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	9883	1862	9883	135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCCTTAGGTTCTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122709821	122706629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021729	chr6	-	248	2	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	7180	4961	7180	-2964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGAGTAGTTCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	122712524	122709728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122709834_122712381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021730	chr6	-	238	2	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	6038	7693	6038	-5696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCACCCAACTACGTCC	NA	NA	NA	NA	NA	NA	NA	NA	122713666	122712460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122712570_122713537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021731	chr6	-	188	2	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	5634	8799	5634	-6802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGGAGGAAGACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	122714070	122713566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122713701_122714016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021732	chr6	-	226	2	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	2783	9394	2783	-7397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCGCTTACTCATTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	122716921	122714161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122714258_122716791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021733	chr6	-	255	2	ISM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	2265	12023	2265	-10026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAGCAGACACTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	122717439	122716790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122716953_122717346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021734	chr6	-	218	2	ISM	ENSMUSG00000003153.11	ENST00000396589.6	2119	10	28	10956	28	-10585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGAGTGTGCCGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	122774812	122717349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_122717440_122774684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021735	chr6	+	385	3	ISM	ENSMUSG00000030327.9	ENST00000639167.1	2070	5	12	5912	12	-5712	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGCTGTAGTTAACGT	NA	NA	NA	NA	NA	NA	NA	NA	122851530	122859956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122851623_122859226_122859336_122859772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021736	chr6	+	719	3	ISM	ENSMUSG00000030327.9	ENST00000639811.1	2055	7	7738	914	7738	-914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTGGCCCCAGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	122859256	122864754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122859336_122859772_122859957_122864298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021737	chr6	+	1269	3	ISM	ENSMUSG00000030327.9	ENST00000639167.1	2070	5	8315	527	8315	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTAGGCTTTGATACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	122859833	122865341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_122859957_122863710_122863814_122864298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021738	chr6	+	1083	1	Genic_Genomic	ENSMUSG00000030327.9	novel	NA	NA	NA	NA	13300	1	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCATCTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	122864818	122865901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_122864800_122865900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021739	chr6	-	914	3	ISM	ENSMUSG00000005069.13	ENST00000400933.2	1635	13	15093	-388	15093	388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCAGTTGTGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	124375905	124374539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124375130_124375302_124375461_124375739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021740	chr6	-	203	1	NIC	ENSMUSG00000005069.13	novel	3148	16	NA	NA	15868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGGATGGGCTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	124375130	124374927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_124374900_124375100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021741	chr6	-	494	3	ISM	ENSMUSG00000005069.13	ENST00000400933.2	1635	13	14583	414	14583	-414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTAGGCATCAGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	124376415	124375341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124375461_124375739_124375906_124376206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021742	chr6	-	398	3	ISM	ENSMUSG00000005069.13	ENST00000400933.2	1635	13	14110	858	14110	-858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTGTGGACTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	124376888	124375785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124375906_124376206_124376414_124376817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021743	chr6	-	378	4	ISM	ENSMUSG00000005069.13	ENST00000400933.2	1635	13	10896	1351	10896	-1351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCTCCTGGGGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	124380102	124376278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124376414_124376817_124376889_124377046_124377191_124380074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021744	chr6	-	380	4	ISM	ENSMUSG00000005069.13	ENST00000400933.2	1635	13	9355	2130	9355	-2130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACATGGAAGTGAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	124381643	124377057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124377191_124380074_124380171_124380770_124380867_124381588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021745	chr6	+	1648	3	ISM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	13776	828	-1458	-828	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTAAGCCAGGAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	124483847	124486774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124483953_124484048_124484124_124485306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021746	chr6	+	1558	1	Genic_Genomic	ENSMUSG00000038527.10	novel	NA	NA	NA	NA	748	9	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGATTCTACTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	124486053	124487611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_124486100_124487600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021747	chr6	+	567	2	ISM	ENSMUSG00000055172.11	ENSMUST00000068593.9	2981	11	37	9584	37	-9584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGACTATGTTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	124489400	124490818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124489760_124490610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021748	chr6	+	469	3	ISM	ENSMUSG00000055172.11	ENSMUST00000068593.9	2981	11	4550	5628	4550	-5628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGGCCAAGGCTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	124493913	124494774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124494112_124494319_124494468_124494651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021749	chr6	+	499	1	ISM	ENSMUSG00000055172.11	ENSMUST00000068593.9	2981	11	10540	0	10540	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTTGTGTTCTGTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	124499903	124500402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124499900_124500400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021750	chr6	-	1358	1	ISM	ENSMUSG00000038521.18	ENSMUST00000160505.8	2946	12	10617	2	10617	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGTCTGCTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	124508663	124507305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124507300_124508700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021751	chr6	-	1384	2	ISM	ENSMUSG00000038521.18	ENSMUST00000160505.8	2946	12	9717	76	9717	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGAAATTAATTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	124509563	124507379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124508700_124509499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021752	chr6	-	903	1	ISM	ENSMUSG00000079343.5	ENSMUST00000068797.3	2662	11	10259	299	10259	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATCTTCCCTCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	124602785	124601882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124601900_124602800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021753	chr6	-	1139	4	ISM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	7812	171	7728	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCACAACAATGGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	124605316	124602053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124602922_124603716_124603792_124604449_124604579_124605249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021754	chr6	-	543	4	NNC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	6603	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	124682538	124681343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_124681617_124681901_124682052_124682120_124682180_124682477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021755	chr6	-	654	5	ISM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	6413	0	6413	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	124682728	124681343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021756	chr6	-	743	5	ISM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	13	558	13	-558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTCTGGGCTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	124689128	124681901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021757	chr6	+	846	4	FSM	ENSMUSG00000004264.18	ENST00000546111.5	839	4	2	-9	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	124689187	124693913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_124689527_124689666_124689752_124692916_124692994_124693568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021758	chr6	+	1229	7	ISM	ENSMUSG00000004264.18	ENST00000399433.7	1517	8	429	-1	354	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAAATTTTGTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	124689672	124693905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692554_124692623_124692916_124692994_124693295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021759	chr6	+	338	1	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	4249	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAAAATTTTGTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	124693567	124693905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_124693600_124693900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021760	chr6	-	244	1	Genic_Genomic	ENSMUSG00000072772.4_ENSMUSG00000107478.2	novel	NA	NA	NA	NA	1949	1	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTCAGTCATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	124716388	124716144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_124716100_124716400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021761	chr6	-	763	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	100	0	100	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTCAGTCATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	124718237	124716145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_124716377_124717481_124717659_124717882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021762	chr6	-	1315	2	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	9336	3172	9336	-3172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGCGCGAGCGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	124724151	124722678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124722825_124722982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021763	chr6	-	1207	2	ISM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	7233	4295	7233	-4295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCATCACCAGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	124726254	124723801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124724953_124726198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021764	chr6	+	782	2	ISM	ENSMUSG00000038451.14	ENSMUST00000047760.10	1213	3	32	698	32	-698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCCAGTGCCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	124785655	124786884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124785743_124786189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021765	chr6	+	1095	2	ISM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	320	0	-72	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTATTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124786188	124787582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124786933_124787231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021766	chr6	-	1603	7	FSM	ENSMUSG00000023456.17	ENSMUST00000172132.10	1607	7	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCCCAGGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	124791254	124787547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021767	chr6	-	632	1	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	13773	7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGGCTGACTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	124792625	124791993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_124792000_124792600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021768	chr6	-	851	3	ISM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	11980	-6	11980	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGGGGCTGACTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	124794418	124791994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124792623_124793946_124794032_124794280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021769	chr6	+	809	5	FSM	ENSMUSG00000023505.14	ENST00000535406.5	809	5	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTGGAGTCATCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	124807491	124810105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_124807614_124808324_124808456_124809108_124809403_124809528_124809633_124809947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021770	chr6	+	681	4	FSM	ENSMUSG00000023505.14	ENST00000540683.1	705	4	26	-2	26	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGGAGTCATCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	124807516	124810106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_124807614_124808324_124808456_124809108_124809403_124809947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021771	chr6	+	750	5	NNC	ENSMUSG00000023505.14	novel	809	5	NA	NA	52	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCTGTGCTGGAGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	124807542	124810101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_124807614_124808328_124808456_124809108_124809403_124809528_124809633_124809947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021772	chr6	+	540	3	ISM	ENSMUSG00000023505.14	ENST00000540683.1	705	4	825	51	825	-51	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGGACCACGACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	124808315	124810053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124808456_124809108_124809403_124809947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021773	chr6	+	695	4	ISM	ENSMUSG00000023505.14	ENST00000535406.5	809	5	825	0	825	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGGAGTCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	124808315	124810104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124808456_124809108_124809403_124809528_124809633_124809947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021774	chr6	+	681	4	NNC	ENSMUSG00000023505.14	novel	809	5	NA	NA	831	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTGGAGTCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	124808321	124810104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_124808456_124809108_124809395_124809528_124809633_124809947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021775	chr6	-	1421	4	ISM	ENSMUSG00000038390.12	ENST00000428545.6	1580	5	1707	0	1707	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGTTCAGCGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	124839087	124835406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124836184_124836454_124836613_124836985_124837176_124838791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021776	chr6	-	1144	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	124894904	124890643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021777	chr6	+	559	4	ISM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	2477	697	2477	-697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCCTGAGAGGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	124910915	124912410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124910971_124911253_124911383_124911548_124911709_124912195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021778	chr6	+	1046	4	ISM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	2814	0	2814	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGATTCTGGCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	124911252	124913107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124911383_124911548_124911709_124912195_124912409_124912564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021779	chr6	+	1027	4	ISM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	2858	-1	2814	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTCTGGCTGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	124911252	124913109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_124911383_124911548_124911709_124912195_124912409_124912585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021780	chr6	+	637	2	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	3823	-26	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAATAAAGGAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	124912261	124913081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_124912409_124912591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021781	chr6	+	622	2	NNC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	3869	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	124912307	124913108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_124912413_124912591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021782	chr6	+	537	1	Genic_Genomic	ENSMUSG00000030120.15	novel	NA	NA	NA	NA	4137	4	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGGCTGTACTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	124912575	124913112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_124912600_124913100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021783	chr6	-	451	1	Genic_Genomic	ENSMUSG00000030127.16	novel	NA	NA	NA	NA	6183	1	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGAACTGGGCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	124936228	124935777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_124935800_124936200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021784	chr6	-	1409	6	ISM	ENSMUSG00000030127.16	ENSMUST00000032220.15	1817	8	2790	0	2790	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124939621	124935778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021785	chr6	-	987	3	ISM	ENSMUSG00000030127.16	ENST00000538410.5	1553	7	4127	82	4102	-65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTCCTGTGGTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	124938309	124935908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124936601_124937053_124937160_124938120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021786	chr6	-	477	3	ISM	ENSMUSG00000030127.16	ENST00000626119.2	1715	7	636	2337	543	-2274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTACTTGTCAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	124941868	124938117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_124938324_124939320_124939410_124941686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021787	chr6	+	1338	1	ISM	ENSMUSG00000038346.19	ENSMUST00000112428.8	3132	11	27185	105	26031	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAATTATACAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	125013385	125014723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125013400_125014700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021788	chr6	+	1217	4	ISM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	7643	-1	7618	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	125024441	125026228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125024551_125024755_125024904_125025138_125025201_125025330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021789	chr6	+	546	1	ISM	ENSMUSG00000108037.3	ENSMUST00000203287.3	3516	9	8691	2490	8691	-2490	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGCATCCTCTGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	125025469	125026015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125025500_125026000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021790	chr6	+	708	1	NIC	ENSMUSG00000072770.10	novel	1498	5	NA	NA	3520	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	125030449	125031157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_125030400_125031200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021791	chr6	+	456	4	FSM	ENSMUSG00000038279.11	ENST00000540228.1	454	4	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAGCACCAATTCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	125109173	125111536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_125109282_125110481_125110528_125110676_125110855_125111412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021792	chr6	+	474	4	ISM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	18	6760	18	175	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCAAGTAGATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	125109192	125111710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125109282_125110481_125110528_125110676_125110766_125111460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021793	chr6	+	417	4	NNC	ENSMUSG00000038279.11	novel	454	4	NA	NA	33	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCGCCCAGCACCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	125109207	125111532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_125109282_125110481_125110532_125110681_125110855_125111412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021794	chr6	+	337	2	NNC	ENSMUSG00000038279.11	novel	1873	14	NA	NA	1499	166	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGGGTATTCTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	125110673	125111701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_125110770_125111460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021795	chr6	+	417	3	ISM	ENSMUSG00000038279.11	ENST00000620535.4	1873	14	1542	4535	1542	2400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCCACAGGCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	125110716	125113935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125110766_125111460_125111710_125113816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021796	chr6	+	462	3	ISM	ENSMUSG00000038279.11	ENST00000620535.4	1873	14	2351	4290	2351	2645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTGAGTGCAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	125111525	125114180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125111710_125113816_125113932_125114017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021797	chr6	+	461	3	NNC	ENSMUSG00000038279.11	novel	1873	14	NA	NA	4651	2929	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGAGGTACCGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	125113825	125114464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_125113932_125114017_125114190_125114281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021798	chr6	-	292	2	Antisense	novelGene_ENSMUSG00000038279.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGGTGGGACTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	125114473	125114091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr6_-_125114184_125114273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021799	chr6	+	377	3	NNC	ENSMUSG00000038279.11	novel	1799	14	NA	NA	4921	3153	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTCCTTTTAATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	125114095	125114688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_125114190_125114281_125114474_125114597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021800	chr6	+	380	3	ISM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	5098	1779	5098	-1779	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCCCCAGCTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	125114272	125116691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125114474_125114597_125114688_125116602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021801	chr6	+	321	3	ISM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	5421	1561	5421	-1561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCAAAGGGCAGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	125114595	125116909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125114688_125116602_125116691_125116768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021802	chr6	+	381	3	ISM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	7423	826	7423	-826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTTCTGAGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	125116597	125117644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125116691_125116768_125116910_125117497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021803	chr6	+	498	4	ISM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	7593	346	7593	-346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTCTGCGGGGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	125116767	125118124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125116910_125117497_125117638_125117752_125117843_125117998
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021804	chr6	+	492	4	ISM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	8419	-1	8419	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGCTCTTCCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	125117593	125118471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125117638_125117752_125117843_125117998_125118122_125118236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021805	chr6	+	240	1	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	9057	1	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGCTCTTCCCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	125118231	125118471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_125118200_125118500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021806	chr6	+	684	2	ISM	ENSMUSG00000038271.18	ENSMUST00000117675.8	2833	10	157	12126	157	-12126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGCAGCCACCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	125122370	125126613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125122993_125126551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021807	chr6	+	514	2	ISM	ENSMUSG00000038271.18	ENSMUST00000117675.8	2833	10	13831	841	13831	-841	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTGGGTATCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	125136044	125137898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125136156_125137495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021808	chr6	+	607	1	ISM	ENSMUSG00000038271.18	ENSMUST00000119527.8	2840	9	15935	0	15925	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGAGCCTGCTTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	125138138	125138745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125138100_125138700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021809	chr6	-	1424	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	-2	-2	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTTGGTTTTAATGCG	NA	NA	NA	NA	NA	NA	NA	NA	125142738	125138814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021810	chr6	-	1390	6	NNC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	125142723	125138815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140423_125142514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021811	chr6	-	173	1	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	23522	0	23522	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	125145142	125144969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125145000_125145100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021812	chr6	-	187	2	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	18268	5043	18268	-5043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCGGCGGCGAGTTCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	125150396	125150012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125150126_125150322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021813	chr6	-	209	3	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	17889	5427	17889	-5427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGATGTTGCAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	125150775	125150396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125150488_125150563_125150649_125150742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021814	chr6	-	185	2	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	17361	5837	17361	-5837	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGACTACAGGCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	125151303	125150806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125150876_125151187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021815	chr6	-	158	2	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	10700	11688	10700	-11688	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAACCGTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125157964	125156657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125156793_125157941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021816	chr6	-	189	2	ISM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	5511	17732	5511	-17732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCACCTATGGAACCACT	NA	NA	NA	NA	NA	NA	NA	NA	125163153	125162701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125162800_125163062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021817	chr6	+	606	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	7	2814	7	-2814	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATCCCAGCAAGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	125169134	125170418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_125169397_125169478_125169590_125170185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021818	chr6	+	317	1	ISM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	3788	0	3788	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTGGGTTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125172915	125173232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125172900_125173200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021819	chr6	+	590	4	FSM	ENSMUSG00000030337.17	ENST00000535180.5	615	4	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCCTGTTGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	125195561	125198694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_125195664_125195873_125196033_125196548_125196605_125198421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021820	chr6	+	510	4	NNC	ENSMUSG00000030337.17	novel	615	4	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCCTGTTGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	125195634	125198694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_125195664_125195873_125196033_125196548_125196605_125198428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021821	chr6	+	313	2	NIC	ENSMUSG00000030337.17	novel	615	4	NA	NA	1014	-10	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGAGCGTATGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	125196550	125198684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_125196601_125198421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021822	chr6	+	324	2	NNC	ENSMUSG00000030337.17	novel	615	4	NA	NA	1014	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCCTGTTGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	125196550	125198694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_125196605_125198424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021823	chr6	+	273	1	ISM	ENSMUSG00000030337.17	ENSMUST00000032487.14	2772	5	5908	575	2885	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCCTGTTGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	125198421	125198694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125198400_125198700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021824	chr6	-	1000	4	ISM	ENSMUSG00000038213.8	ENST00000266556.8	1457	6	2337	0	2337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAACTCTTACTACTATA	NA	NA	NA	NA	NA	NA	NA	NA	125205366	125199052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125199319_125201826_125201914_125203453_125203760_125205025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021825	chr6	+	614	2	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	13	13167	13	-13167	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCCCCGCCCCTCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	125298997	125308147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125299338_125307873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021826	chr6	+	575	3	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	8885	6449	1	-6449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGCTCCCGTCCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	125307869	125314865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125308148_125309055_125309247_125314759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021827	chr6	+	432	3	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	10084	5966	1200	-5966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTATGAGAAAGGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	125309068	125315348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125309247_125314759_125314864_125315198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021828	chr6	+	369	3	ISM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	6891	5633	6891	-5414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAGCCTGTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	125314759	125315900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125314864_125315198_125315363_125315799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021829	chr6	+	337	3	ISM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	7375	5346	7375	-5127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGAGAGCCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	125315243	125316187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125315363_125315799_125315899_125316068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021830	chr6	+	300	3	ISM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	7929	1888	7929	-1669	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGCTTTCCTGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	125315797	125319645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125315899_125316068_125316187_125319564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021831	chr6	+	523	4	ISM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	20579	342	11695	-342	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTAGGCCCCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	125319563	125320972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125319644_125319983_125320040_125320184_125320261_125320661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021832	chr6	+	345	1	ISM	ENSMUSG00000030340.17	ENSMUST00000176655.8	3354	13	23349	487	13102	1	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAACGACCAAACGAACC	NA	NA	NA	NA	NA	NA	NA	NA	125320970	125321315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125321000_125321300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021833	chr6	+	1016	2	ISM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	11574	70	11574	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGAAAGGCGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	125338259	125339377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125338548_125338649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021834	chr6	+	772	1	Genic_Genomic	ENSMUSG00000030341.18	novel	NA	NA	NA	NA	11991	1	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACCCTGGAAAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	125338676	125339448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_125338700_125339400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021835	chr6	-	381	2	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	17216	-4	17216	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGGACCCTGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	125340253	125339698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125339831_125340004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021836	chr6	-	128	1	ISM	ENSMUSG00000038167.7	ENSMUST00000042647.7	3299	17	17926	80	17639	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTGAGGACCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	125339830	125339702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125339700_125339800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021837	chr6	-	539	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	10010	709	10010	-709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCAGAAGGGATCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	125347459	125340411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125340683_125341546_125341699_125347343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021838	chr6	-	358	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	9786	1893	9786	-1893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACACCTTCGCCTTCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	125347683	125341595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125341699_125347343_125347460_125347544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021839	chr6	-	247	2	NNC	ENSMUSG00000038167.7	novel	2710	16	NA	NA	9790	-7641	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGGTGGGTCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	125347679	125347343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_125347456_125347544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021840	chr6	-	363	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	8327	7649	8327	-7649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCAGGTAGGTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	125349142	125347351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125347460_125347544_125347678_125349020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021841	chr6	-	370	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	7885	7869	7885	-7869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTGCCGACCACTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	125349584	125347571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125347678_125349020_125349141_125349440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021842	chr6	-	379	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	7539	9352	7539	-9352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGCGGGTGAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	125349930	125349054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125349141_125349440_125349579_125349775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021843	chr6	-	328	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	7282	9816	7282	-9816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGAGTTTGATGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125350187	125349518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125349579_125349775_125349926_125350069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021844	chr6	-	361	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	5825	10126	5825	-10126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCGCAAGAGAAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	125351644	125349828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125349926_125350069_125350181_125351491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021845	chr6	-	289	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	5482	10390	5482	-10390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTCCACACCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	125351987	125350092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125350181_125351491_125351642_125351936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021846	chr6	-	299	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	5166	11789	5166	-11789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTGGGGAGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125352303	125351491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125351642_125351936_125351988_125352205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021847	chr6	-	317	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	4616	12231	4616	-12231	internal_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAAGCAGAGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	125352853	125351933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125351988_125352205_125352302_125352686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021848	chr6	-	380	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	2967	12542	2967	-12542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGATCTACCTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	125354502	125352244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125352302_125352686_125352852_125354344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021849	chr6	-	441	3	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	1593	13076	1593	-13076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGACCGGAGACACTGG	NA	NA	NA	NA	NA	NA	NA	NA	125355876	125352778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125352852_125354344_125354501_125355664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021850	chr6	-	366	2	ISM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	1	15961	1	-15961	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCGCCTGTGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	125357468	125355663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_125355874_125357312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021851	chr6	-	1231	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGCTGATTGCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	125471756	125437227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021852	chr6	+	311	2	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	96	327429	96	-327429	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGGATGCTCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	125687622	125689313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125687704_125689083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021853	chr6	+	306	2	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	1644	263918	1644	-263918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCTTGAAGATCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	125689170	125752824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125689411_125752758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021854	chr6	+	308	3	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	65230	246168	65230	-246168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAATGGGTGTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	125752756	125770574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125752858_125767203_125767356_125770519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021855	chr6	+	292	2	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	152863	172610	152863	-172610	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGTCATCACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	125840389	125844132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125840521_125843971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021856	chr6	+	280	3	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	156500	159043	156500	-159043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGAGGATGATGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	125844026	125857699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125844133_125849630_125849714_125857608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021857	chr6	+	349	3	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	170112	76039	170112	-76039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGTGTCACAAATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	125857638	125940703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125857717_125932661_125932737_125940507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021858	chr6	+	270	2	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	252980	59612	252980	-59612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCCCCCATCTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	125940506	125957130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125940704_125957057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021859	chr6	+	293	3	NNC	ENSMUSG00000038115.17	novel	3232	24	NA	NA	272146	-46837	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCTGAGTACATGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	125959672	125969905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_125959741_125959885_125959987_125969781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021860	chr6	+	398	3	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	272361	26467	272361	-26467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTTGCCCCTGACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	125959887	125990275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_125959987_125969781_125969928_125990122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021861	chr6	+	252	2	ISM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	326280	396	326280	-396	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCCCACCCAGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	126013806	126016346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_126013917_126016204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021862	chr6	+	292	1	ISM	ENSMUSG00000038115.17	ENSMUST00000160496.8	3925	26	349070	346	328925	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAATTTTCTCGGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	126016451	126016743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_126016500_126016700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021863	chr6	+	175	2	ISM	ENSMUSG00000101659.2	ENST00000654905.1	1230	3	138	11635	138	-169	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTTCGTGTAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	126308856	126311382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_126308935_126311285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021864	chr6	+	257	2	ISM	ENSMUSG00000101659.2	ENST00000654905.1	1230	3	2598	726	2598	-726	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACTGAGGACGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126311316	126322291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_126311442_126322159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021865	chr6	+	170	1	ISM	ENSMUSG00000101659.2	ENST00000654905.1	1230	3	14129	0	14129	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGCTCTTCCAATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	126322847	126323017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_126322800_126323000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021866	chr6	-	859	6	ISM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	12825	0	12825	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGATCTGAATTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	126813263	126798683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021867	chr6	+	786	3	ISM	ENSMUSG00000030344.12	ENSMUST00000202878.4	3023	6	4015	9153	3999	-9151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTCCCGGAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	126834121	126842115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_126834175_126837217_126837314_126841478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021868	chr6	+	987	2	ISM	ENSMUSG00000030344.12	ENSMUST00000202574.2	2879	4	13062	-1	13062	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAAGTGTGGCTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	126843184	126851272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_126843822_126850922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021869	chr6	+	347	1	NIC	ENSMUSG00000030344.12	novel	3153	6	NA	NA	20798	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCATAAGTGTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	126850920	126851267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_126850900_126851300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021870	chr6	+	398	3	ISM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	33588	587	33588	-587	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTACTCAGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	126950516	126952343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_126950577_126951449_126951518_126952073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021871	chr6	+	404	1	Genic_Genomic	ENSMUSG00000030347.7	novel	NA	NA	NA	NA	35599	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCGCCATCTCACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	126952527	126952931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_126952500_126952900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021872	chr6	+	480	2	FSM	ENSMUSG00000097166.2	ENST00000646245.1	652	2	18	154	18	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGGATGTCAGACACG	NA	NA	NA	NA	NA	NA	NA	NA	127126377	127149585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_127126527_127149254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021873	chr6	+	384	1	Genic_Genomic	ENSMUSG00000097166.2	novel	NA	NA	NA	NA	22769	2	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGGTTAGGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	127149357	127149741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_127149400_127149700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021874	chr6	+	932	1	FSM	ENSMUSG00000062365.5	ENSMUST00000071458.5	858	1	1	-75	1	75	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACCAGGAACCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	127210725	127211657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_127210700_127211700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021875	chr6	-	3424	4	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	170224	-1406	170224	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGTTATTTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	127943448	127938358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021876	chr6	-	3108	1	NIC	ENSMUSG00000030352.16	novel	3819	8	NA	NA	172206	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGTTATTTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	127941466	127938358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_127938400_127941500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021877	chr6	+	569	1	FSM	ENSMUSG00000053173.13	ENSMUST00000118863.2	567	1	72	-74	72	74	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAGAAAGAGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128290391	128290960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_128290400_128291000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021878	chr6	-	964	1	ISM	ENSMUSG00000001521.13	ENSMUST00000157005.3	1053	2	12621	0	12621	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTGTTGTTTAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	128320167	128319203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_128319200_128320200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021879	chr6	-	530	1	Genic_Genomic	ENSMUSG00000048668.17	novel	NA	NA	NA	NA	1829	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTGTCTCAGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	128334491	128333961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_128334000_128334500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021880	chr6	-	1572	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCTCGTGCCCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	128339819	128334322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_128335157_128336068_128336318_128339330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021881	chr6	-	1109	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGCAGCCTCGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	128339831	128334326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_128335157_128336068_128336318_128339801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021882	chr6	+	797	3	ISM	ENSMUSG00000001517.15	ENSMUST00000112148.4	2229	6	28	4496	28	-4496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGGCTGGAAGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	128342695	128346433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_128343164_128344249_128344402_128346256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021883	chr6	+	814	3	ISM	ENSMUSG00000001517.15	ENST00000627656.2	3299	7	8099	1283	5356	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACATTGCCTGTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	128348023	128350455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_128348049_128349493_128349567_128349739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021884	chr6	+	809	1	ISM	ENSMUSG00000001517.15	ENST00000627656.2	3299	7	11005	0	8262	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTACAAGCTACAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	128350929	128351738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_128350900_128351700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021885	chr6	+	663	1	ISM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	12517	0	9779	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCAAGGGCTGGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	128352446	128353109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_128352400_128353100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021886	chr6	-	574	1	Genic_Genomic	ENSMUSG00000030357.11	novel	NA	NA	NA	NA	7835	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTGTCAGGCAACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	128407638	128407064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_128407100_128407600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021887	chr6	-	1179	5	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	4882	202	4715	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTGGTATTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	128410758	128407267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021888	chr6	-	628	5	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	4100	1725	4100	-1725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGACCCGTAGGCAGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	128411373	128409463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021889	chr6	-	632	5	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	3636	2339	3636	-2339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACAAGGTAAGATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	128411837	128410077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021890	chr6	-	634	5	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	1963	3623	1796	-2950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGCTGAAGAGCTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	128413677	128410688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021891	chr6	-	724	5	ISM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	84	4232	-83	-3559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTCCATCGTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	128415556	128411297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021892	chr6	-	570	3	ISM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	-167	4928	0	-4928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGATCTCTGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	128415640	128412666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_128412820_128413532_128413678_128415368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021893	chr6	+	1985	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	225	-731	225	731	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCCACCTAAGATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	128622100	128624085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_128622100_128624100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021894	chr6	+	1821	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCCTCTTTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	129510122	129519310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021895	chr6	+	1728	4	NNC	ENSMUSG00000030161.9	novel	1820	4	NA	NA	46	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGCCTCTTTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	129510208	129519310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_129510500_129514453_129514533_129515532_129515645_129518064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021896	chr6	-	139	2	ISM	ENSMUSG00000032899.15	ENSMUST00000049150.8	3380	9	12152	1362	12152	-371	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTGCCGATGACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	131278638	131277466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_131277555_131278587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021897	chr6	-	136	2	ISM	ENSMUSG00000032899.15	ENSMUST00000049150.8	3380	9	11464	2485	11464	-1494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGAGGCTCTTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	131279326	131278589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_131278685_131279285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021898	chr6	-	128	2	ISM	ENSMUSG00000032899.15	ENSMUST00000049150.8	3380	9	6696	5713	6696	-4722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTCCCAAACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	131284094	131281817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_131281885_131284033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021899	chr6	-	135	2	ISM	ENSMUSG00000032899.15	ENSMUST00000049150.8	3380	9	1290	12010	1290	-11019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATGGAGAAAAAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	131289500	131288114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_131288163_131289413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021900	chr6	+	146	2	Antisense	novelGene_ENSMUSG00000032899.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGAAGAGACAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	131289469	131330498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr6_+_131289551_131330433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021901	chr6	-	372	1	ISM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	23212	0	23212	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	131342189	131341817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_131341800_131342200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021902	chr6	+	1058	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	1784	0	1437	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTCCTCATTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	133083655	133084713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_133083700_133084700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021903	chr6	-	707	1	Genic_Genomic	ENSMUSG00000092134.2	novel	NA	NA	NA	NA	9848	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAAAATTTGAGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	134210826	134210119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_134210100_134210800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021904	chr6	+	847	4	FSM	ENSMUSG00000042992.16	ENST00000542728.5	558	4	1	-290	1	198	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTCTGATCTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	134617953	134687516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_134617989_134621291_134621436_134662926_134663085_134687006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021905	chr6	+	387	2	ISM	ENSMUSG00000042992.16	ENST00000542728.5	558	4	44965	0	44965	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCAGGCGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	134662917	134687226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_134663085_134687006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021906	chr6	+	222	1	NIC	ENSMUSG00000042992.16	novel	792	4	NA	NA	69052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCAGGCGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	134687004	134687226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_134687000_134687200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021907	chr6	+	561	1	Genic_Genomic	ENSMUSG00000042992.16	novel	NA	NA	NA	NA	69640	3	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTGATTCTAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	134687592	134688153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_134687600_134688200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021908	chr6	-	2884	5	FSM	ENSMUSG00000030203.18	ENST00000228862.3	2884	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCCATGTAACCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134738393	134694138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134735581_134735721_134737808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021909	chr6	+	642	3	ISM	ENSMUSG00000032652.14	ENST00000228865.3	1362	4	-1	5470	-1	-4931	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTCTATGGCAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	134807113	134828192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_134807408_134826065_134826264_134828042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021910	chr6	+	691	3	ISM	ENSMUSG00000032652.14	ENST00000228865.3	1362	4	18948	381	18845	158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGATTTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134826062	134833281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_134826264_134828042_134828188_134832936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021911	chr6	+	423	1	ISM	ENSMUSG00000032652.14	ENST00000228865.3	1362	4	26125	0	26022	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTAGTAGCATCCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	134833239	134833662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_134833200_134833700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021912	chr6	+	729	2	FSM	ENSMUSG00000003031.15	ENSMUST00000067327.11	4552	2	381	3442	-125	-2611	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAGCTCCGGTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	134897744	134899034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_134898358_134898918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021913	chr6	+	585	2	FSM	ENSMUSG00000003031.15	ENST00000396340.1	901	2	188	128	188	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCATGGGGGTGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	134898057	134901517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_134898358_134901232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021914	chr6	+	335	1	ISM	ENSMUSG00000003031.15	ENSMUST00000067327.11	4552	2	3947	831	3441	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCCTTTCGGTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	134901310	134901645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_134901300_134901600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021915	chr6	+	842	4	ISM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	7358	-1	7358	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCTGTGTGTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	134995932	135000740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_134996075_134997578_134997650_134998411_134998542_135000241
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021916	chr6	+	500	1	Genic_Genomic	ENSMUSG00000030204.11	novel	NA	NA	NA	NA	11666	1	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCTGTGTGTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	135000240	135000740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_135000200_135000700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021917	chr6	+	614	3	ISM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	13435	804	13435	-804	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGGGCATCCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	135056083	135060903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_135056483_135060440_135060497_135060744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021918	chr6	+	436	1	ISM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	18623	0	18623	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATTTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	135061271	135061707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_135061300_135061700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021919	chr6	-	1058	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGACAGTTTTAAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	135145213	135114519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021920	chr6	-	1169	6	FSM	ENSMUSG00000030206.14	ENST00000337630.10	1160	6	0	-9	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCTGTGCCTCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	135224903	135214278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_135214744_135217070_135217183_135218242_135218396_135219171_135219220_135221078_135221398_135224831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021921	chr6	-	993	4	NNC	ENSMUSG00000030206.14	novel	1160	6	NA	NA	3601	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGAACCTCCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	135221302	135214286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_135214744_135217070_135217183_135218242_135218443_135221078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021922	chr6	-	517	1	FSM	ENSMUSG00000082691.7	ENSMUST00000117045.2	342	1	172	-347	172	347	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGAGGATGGGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	135326575	135326058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_135326100_135326600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021923	chr6	+	308	3	ISM	ENSMUSG00000030208.16	ENST00000544053.5	691	4	9	1159	9	-1082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCCAGCTCTTCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	135339960	135357169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_135340101_135356898_135356996_135357098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021924	chr6	+	256	3	ISM	ENSMUSG00000030208.16	ENST00000544053.5	691	4	17008	225	-137	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCATACTCTATATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	135356959	135358103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_135356996_135357098_135357170_135357954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021925	chr6	+	378	2	FSM	ENSMUSG00000030208.16	ENST00000396301.7	368	2	-4	-6	-4	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAAGGAAGAGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	135357092	135358257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_135357261_135358047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021926	chr6	+	1934	2	ISM	ENSMUSG00000030208.16	ENSMUST00000111907.2	2763	5	12606	409	0	-409	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATGTTTAAGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	135357096	135359762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_135357240_135357971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021927	chr6	-	363	2	Antisense	novelGene_ENSMUSG00000030208.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGTGAAGACAAGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135358251	135357099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr6_-_135357263_135358051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021928	chr6	+	361	2	NNC	ENSMUSG00000030208.16	novel	368	2	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAGAGGGAAGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	135357106	135358251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_135357261_135358044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021929	chr6	+	309	2	NNC	ENSMUSG00000030208.16	novel	368	2	NA	NA	24	-21	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGAGAGGGGAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	135357120	135358230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_135357244_135358044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021930	chr6	+	2132	1	ISM	ENSMUSG00000030208.16	ENSMUST00000205156.3	2911	6	18497	0	943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	135358039	135360171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_135358000_135360200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021931	chr6	+	477	1	FSM	ENSMUSG00000071141.8	ENSMUST00000120093.2	321	1	-72	-84	-72	84	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCATCCCTGAGAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	136465732	136466209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_136465700_136466200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021932	chr6	+	475	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	1356	0	1267	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGACAGTGTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	136786597	136787072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_136786600_136787100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021933	chr6	-	224	1	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	14356	0	14356	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	136790875	136790651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136790700_136790900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021934	chr6	-	271	2	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	12111	789	12111	-789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCCCAGATCACCAATC	NA	NA	NA	NA	NA	NA	NA	NA	136793120	136791440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136791640_136793048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021935	chr6	-	302	2	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	11089	2479	11089	-2479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGGCCCACCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	136794142	136793130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136793232_136793941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021936	chr6	-	211	2	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	10200	3477	10200	-3477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACGATGGCCACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	136795031	136794128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136794236_136794927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021937	chr6	-	228	2	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	7596	4281	7596	-4281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGTTAGAAGCAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	136797635	136794932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136795030_136797504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021938	chr6	-	325	2	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	6881	6896	6881	-6896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGAGGACAGTGAGCGCGA	NA	NA	NA	NA	NA	NA	NA	NA	136798350	136797547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136797697_136798174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021939	chr6	-	307	2	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	6569	7552	6569	-7552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGACATGCTGTATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	136798662	136798203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136798375_136798526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021940	chr6	-	226	2	ISM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	5262	7961	5262	-7961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCCTTCCAACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	136799969	136798612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136798661_136799791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021941	chr6	-	834	1	ISM	ENSMUSG00000043298.9	ENSMUST00000068293.4	2056	2	4690	0	4619	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCACTTTCTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	136807758	136806924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136806900_136807800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021942	chr6	-	231	1	Genic_Genomic	ENSMUSG00000030218.3	novel	NA	NA	NA	NA	3160	2	mono-exon	FALSE	NA	NA	NA	NA	NA	457	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAAGTCAGGTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	136849661	136849430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_136849400_136849700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021943	chr6	-	462	4	FSM	ENSMUSG00000030218.3	ENSMUST00000032342.3	617	4	1	154	1	-154	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTGAAGTATACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	136852820	136849586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_136849787_136850164_136850241_136851264_136851298_136852667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021944	chr6	-	143	2	NNC	ENSMUSG00000030218.3	novel	617	4	NA	NA	2607	-254	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTACAACCGCTACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	136850214	136849686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_136849780_136850164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021945	chr6	-	187	2	NNC	ENSMUSG00000030218.3	novel	617	4	NA	NA	48	-753	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGAGCTAAAGCCCAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	136852773	136850185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_136850241_136852641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021946	chr6	-	183	3	NNC	ENSMUSG00000030218.3	novel	617	4	NA	NA	31	-785	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACACCTTTATGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	136852790	136850217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_136850241_136851260_136851298_136852667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021947	chr6	-	311	1	ISM	ENSMUSG00000030220.14	ENSMUST00000111892.8	1153	6	17538	0	17538	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	136900963	136900652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136900700_136901000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021948	chr6	-	1089	5	ISM	ENSMUSG00000030220.14	ENSMUST00000111892.8	1153	6	7728	0	7728	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	136910773	136900652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021949	chr6	-	970	1	ISM	ENSMUSG00000030222.14	ENSMUST00000032347.11	2075	5	114700	3	113888	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTGGAATTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	137032795	137031825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137031800_137032800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021950	chr6	-	983	2	ISM	ENSMUSG00000030222.14	ENSMUST00000119610.4	890	4	111798	-466	111798	466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCCATTTTTCTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	137034885	137032630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137033539_137034810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021951	chr6	-	1392	1	Genic_Genomic	ENSMUSG00000015766.15	novel	NA	NA	NA	NA	59059	1	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGTTGAAAATTAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	137455633	137454241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_137454200_137455600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021952	chr6	-	1249	2	NNC	ENSMUSG00000015766.15	novel	3541	20	NA	NA	58567	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCTATCTCATCAACA	NA	NA	NA	NA	NA	NA	NA	NA	137456125	137454687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_137455623_137455811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021953	chr6	-	1794	5	NNC	ENSMUSG00000015766.15	novel	3541	20	NA	NA	47251	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTCTATCTCATCAACA	NA	NA	NA	NA	NA	NA	NA	NA	137467441	137454687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_137455632_137455815_137456128_137459149_137459280_137460539_137460721_137467214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021954	chr6	-	1056	3	ISM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	87368	644	54045	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAATGAACTGTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	137460647	137455309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137456128_137459149_137459280_137460539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021955	chr6	-	570	2	NNC	ENSMUSG00000015766.15	novel	3560	21	NA	NA	58572	-183	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAGCTTTATTTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	137456120	137455357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_-_137455623_137455815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021956	chr6	-	548	3	ISM	ENSMUSG00000015766.15	ENST00000647224.1	3466	20	37967	5775	37967	-5367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGTGCCCGGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	137476725	137460541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137460721_137467214_137467438_137476579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021957	chr6	-	563	4	ISM	ENSMUSG00000015766.15	ENST00000647224.1	3466	20	32171	12497	32171	-12089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCATTGTGCGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	137482521	137467263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137467438_137476579_137476724_137477532_137477642_137482385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021958	chr6	-	576	5	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	32176	12353	32176	-12095	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGGCAGCATTGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	137482516	137467269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137467438_137470545_137470570_137476579_137476724_137477532_137477642_137482385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021959	chr6	-	686	5	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	25428	21663	25428	-21405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGGGTTCTGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	137489264	137476579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021960	chr6	-	592	5	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	22901	27507	22901	-27249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTTTCAAGTCAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	137491791	137482423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021961	chr6	-	380	4	ISM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	15407	36829	15407	-36571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGACTGTTTCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137499285	137491745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_137491790_137494068_137494196_137496440_137496515_137499150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021962	chr6	+	1258	5	ISM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	28419	0	28401	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTGTTTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	137759974	137814892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021963	chr6	+	446	2	ISM	ENSMUSG00000008540.12	ENSMUST00000204628.3	471	3	-234	8575	4	-8567	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTTCAGAGGTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	138117317	138124815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_138117605_138124656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021964	chr6	+	867	3	ISM	ENSMUSG00000008540.12	ENSMUST00000118091.8	1030	4	6070	-131	6070	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAAATGAAATTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	138124653	138133741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_138124814_138127765_138127861_138133129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021965	chr6	+	479	1	Genic_Genomic	ENSMUSG00000008540.12	novel	NA	NA	NA	NA	14692	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTTTTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	138133275	138133754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_138133300_138133800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021966	chr6	-	1492	4	FSM	ENSMUSG00000030226.13	ENSMUST00000163024.8	1331	4	465	-626	408	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTCCGTGGTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	138399507	138341962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_138343046_138354197_138354324_138393412_138393627_138399438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021967	chr6	+	420	3	ISM	ENSMUSG00000030232.19	ENST00000673824.1	834	7	67	8425	67	-8425	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGCTCACTTAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	140579497	140588084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_140579623_140583385_140583494_140587897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021968	chr6	+	425	3	ISM	ENSMUSG00000030232.19	ENST00000673824.1	834	7	3954	6707	3954	-6707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTGTTTTTCTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	140583384	140589802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_140583494_140587897_140588085_140589673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021969	chr6	+	500	4	ISM	ENSMUSG00000030232.19	ENST00000673824.1	834	7	8473	2686	8473	-2686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAATATACTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	140587903	140593823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_140588085_140589673_140589799_140592535_140592604_140593697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021970	chr6	+	663	4	ISM	ENSMUSG00000030235.18	ENST00000545102.1	1974	12	2909	21596	2909	-21596	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCCACCTTTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	141487812	141493661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_141487965_141490458_141490558_141492402_141492649_141493495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021971	chr6	-	183	1	Genic_Genomic	ENSMUSG00000030243.17	novel	NA	NA	NA	NA	25482	4	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGACCTATCTTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	142307280	142307097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_142307100_142307300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021972	chr6	+	1448	1	Genic_Genomic	ENSMUSG00000041671.14	novel	NA	NA	NA	NA	16159	3	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGTAATAGACTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	142307538	142308986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_142307500_142309000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021973	chr6	-	212	2	ISM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	23439	1384	23388	-1384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGCAGGCGCTAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	142309374	142308485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_142308596_142309272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021974	chr6	-	306	3	ISM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	20288	3199	20237	-3199	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCGCTGAAGCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	142312525	142310300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_142310382_142311241_142311334_142312392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021975	chr6	-	207	2	ISM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	12230	11470	12179	-11470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCAGTGGGGTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	142320583	142318571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_142318741_142320545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021976	chr6	-	255	2	ISM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	8815	15450	8764	-15450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGAAGAGCTTATGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	142323998	142322551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_142322687_142323878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021977	chr6	+	2821	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	142332943	142349584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021978	chr6	+	2811	5	NNC	ENSMUSG00000030245.11	novel	2818	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	142332950	142349584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142342000_142347275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021979	chr6	-	278	2	ISM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	15398	128	15398	-128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCCATGTATGTAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	142438271	142436105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_142436331_142438218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021980	chr6	-	278	2	ISM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	9335	5316	9335	-5316	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAAGAGTTCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	142444334	142441293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_142441468_142444230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021981	chr6	-	769	4	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	80355	0	80336	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTCTGGTACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	142965157	142957535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021982	chr6	+	681	1	ISM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	40636	0	40612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTGGTTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	143153591	143154272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_143153600_143154300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021983	chr6	-	1378	5	ISM	ENSMUSG00000041540.17	ENSMUST00000111748.8	1734	8	85603	-25	85603	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTGTTTGGGGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	143807229	143778535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_143779294_143780921_143781139_143786899_143787074_143790461_143790571_143807109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021984	chr6	-	751	1	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	48910	5317	39735	6	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGATTTGAATCTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	144945628	144944877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_144944900_144945600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021985	chr6	-	913	3	ISM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	41112	5717	31937	-394	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAACTATAACTGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	144953426	144945277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_144946031_144950076_144950152_144953341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021986	chr6	-	368	3	ISM	ENSMUSG00000030268.18	ENST00000539780.5	854	6	24045	0	24045	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAAGAGAAGTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	144961318	144953344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_144953483_144955775_144955862_144961174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021987	chr6	-	519	4	ISM	ENSMUSG00000030268.18	ENST00000539780.5	854	6	6735	2425	6735	-2425	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAACAACATCCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	144978628	144955769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_144955862_144961174_144961318_144964917_144965082_144978508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021988	chr6	-	481	3	ISM	ENSMUSG00000030268.18	ENST00000539780.5	854	6	6	11573	6	-11573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCGGTCCCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	144985357	144964917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_144965082_144978508_144978629_144985160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021989	chr6	-	764	6	ISM	ENSMUSG00000030268.18	ENSMUST00000048252.11	1642	10	97	15177	97	-11676	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTATTTTTCTAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	145021813	144965020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021990	chr6	+	1356	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	18	0	-1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	145156899	145162265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_145156979_145160909_145160998_145161076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021991	chr6	+	571	2	ISM	ENSMUSG00000040370.14	ENSMUST00000111719.2	968	4	3641	244	3641	-244	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTAGAGGCCTTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	145160566	145161216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_145160998_145161076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021992	chr6	+	1638	1	Genic_Genomic	ENSMUSG00000040370.14	novel	NA	NA	NA	NA	4138	36	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATGGAAAGAAGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	145161063	145162701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_145161100_145162700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021993	chr6	-	564	5	FSM	ENSMUSG00000030265.15	ENST00000407852.2	565	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAATTGTGGTTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	145192530	145162409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_145162424_145166349_145166451_145177820_145177981_145179973_145180153_145192420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021994	chr6	-	394	1	ISM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	33147	0	29713	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAATTATGTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	145162818	145162424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_145162400_145162800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021995	chr6	-	569	4	ISM	ENSMUSG00000030265.15	ENST00000407852.2	565	5	1	3921	1	-360	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTACTCTTTCTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	145192530	145166330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021996	chr6	-	268	1	FSM	ENSMUSG00000107756.2	ENSMUST00000203605.2	2561	1	2046	247	2046	-247	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACCTTTTAAGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	145184907	145184639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_145184600_145184900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021997	chr6	-	552	3	FSM	ENSMUSG00000030265.15	ENST00000556131.1	554	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATTACCTTTTAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	145195955	145184642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_145184904_145192420_145192543_145195786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021998	chr6	+	379	1	FSM	ENSMUSG00000067344.8	ENSMUST00000119876.2	378	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTTCAATCAGCTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	145212125	145212504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_145212100_145212500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000021999	chr6	-	2089	1	Genic_Genomic	ENSMUSG00000030256.12	novel	NA	NA	NA	NA	4973	2	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGCTGGTTGCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	145806055	145803966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_-_145804000_145806100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022000	chr6	-	2354	4	ISM	ENSMUSG00000030256.12	ENSMUST00000032386.11	6133	5	500	3424	244	1838	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTGCTGCTGCTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	145810784	145807392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_145809465_145809856_145809969_145810301_145810410_145810722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022001	chr6	+	4427	3	FSM	ENSMUSG00000030255.14	ENSMUST00000032383.14	4431	3	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTGTTGAGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	145879851	145910949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_145880098_145901320_145901408_145906855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022002	chr6	+	4096	1	NIC	ENSMUSG00000030255.14	novel	4415	4	NA	NA	7699	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGGTGTTGAGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	145906853	145910949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_145906900_145910900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022003	chr6	+	1268	1	FSM	ENSMUSG00000107743.2	ENSMUST00000204247.2	1770	1	502	0	502	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATCCATTCATTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	146278416	146279684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_146278400_146279700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022004	chr6	-	631	3	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	24822	-1	24822	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCGGAGTGTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	146454012	146451131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146451484_146452136_146452273_146453869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022005	chr6	-	352	1	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	27350	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTATCGGAGTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	146451484	146451132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_-_146451100_146451500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022006	chr6	-	510	3	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	23120	1003	23120	-1003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTAATTTCCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	146455714	146452135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146452273_146453869_146454010_146455481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022007	chr6	-	520	3	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	22689	2744	22689	-2744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAGGTGAGGACAACCT	NA	NA	NA	NA	NA	NA	NA	NA	146456145	146453876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146454010_146455481_146455713_146455989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022008	chr6	-	546	3	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	22249	4349	22249	-4349	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTGTCCCCTAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	146456585	146455481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146455713_146455989_146456145_146456425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022009	chr6	-	506	3	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	21026	4857	21026	-4857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGCTGTTTTCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	146457808	146455989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146456145_146456425_146456597_146457628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022010	chr6	-	531	4	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	19713	5293	19713	-5293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCTCTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	146459121	146456425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146456597_146457628_146457808_146458748_146458839_146459030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022011	chr6	-	390	4	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	11626	10489	11626	-10489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGCGTTACCCAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	146467208	146461621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146461709_146463226_146463356_146464924_146465016_146467125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022012	chr6	-	426	4	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	10639	12174	10639	-12174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGCTACCAAGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	146468195	146463306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146463356_146464924_146465016_146467125_146467207_146467990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022013	chr6	-	452	3	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	938	16858	938	-16858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCTGCTAATCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	146477896	146467990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_146468194_146476199_146476275_146477722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022014	chr6	+	921	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTGCTTTTCATGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	146479417	146494365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022015	chr6	+	308	3	ISM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	12033	3974	11971	2359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCTATTGAAATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	146491389	146496722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_146491535_146494131_146494246_146496673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022016	chr6	+	371	2	ISM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	17317	1647	17255	-1647	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAATGTATAACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	146496673	146499049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_146496788_146498792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022017	chr6	+	983	1	Genic_Genomic	ENSMUSG00000040242.15	novel	NA	NA	NA	NA	20296	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTCTCAGGGTTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	146499714	146500697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_146499700_146500700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022018	chr6	+	605	3	ISM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	5617	104	5584	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTTTTTATCTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	146549661	146551996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_146549778_146550647_146550749_146551608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022019	chr6	+	396	1	Genic_Genomic	ENSMUSG00000030291.13	novel	NA	NA	NA	NA	7628	1	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTTGTTTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	146551705	146552101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr6_+_146551700_146552100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022020	chr6	+	982	2	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	50441	2293	50400	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTTTTTATTAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	146676933	146678017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_146676990_146677091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022021	chr6	+	981	1	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	52837	0	52796	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTGGGGTGTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	146679329	146680310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_146679300_146680300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022022	chr6	+	484	2	ISM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	141501	1287	141501	-1287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCCCAGATCCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	146931587	146932236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_146931647_146931811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022023	chr6	+	742	1	ISM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	142797	0	142695	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	146932781	146933523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_146932800_146933500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022024	chr6	+	3623	3	ISM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	17373	0	17373	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATACTCTACTTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	146961634	146975489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_146961750_146962920_146962991_146972051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022025	chr6	+	3439	1	NIC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	27789	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATACTCTACTTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	146972050	146975489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_146972000_146975500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022026	chr6	-	501	3	FSM	ENSMUSG00000086021.2	ENSMUST00000153786.2	544	3	44	-1	44	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATATCATGAGAGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	147145255	147144023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_-_147144363_147144498_147144542_147145136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022027	chr6	+	365	4	FSM	ENSMUSG00000030301.18	ENST00000539107.5	364	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGGGTGGCAGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	147464126	147493655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_147464211_147491884_147491978_147492066_147492136_147493536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022028	chr6	+	187	1	NIC	ENSMUSG00000030303.16	novel	3480	12	NA	NA	7662	8	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCAATGGTTTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	148067064	148067251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr6_+_148067100_148067300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022029	chr6	-	642	3	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	29184	2247	29184	-2247	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGTCCTTTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	148084688	148082823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_148083238_148083385_148083469_148084543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022030	chr6	-	516	2	ISM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	32	27454	32	-27454	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCTCAATTCAGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	148113840	148108030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_148108174_148113467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022031	chr6	-	638	1	ISM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	60142	5	60139	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACTCTGTCTGCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	148672823	148672185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_148672200_148672800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022032	chr6	-	653	2	ISM	ENSMUSG00000040029.16	ENST00000256079.9	5096	26	59481	379	59481	-379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTCTCATTTTTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	148673481	148672567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_148673047_148673307
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022033	chr6	-	683	3	ISM	ENSMUSG00000040029.16	ENST00000256079.9	5096	26	54225	1598	54225	-1598	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGAGTTGACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	148678737	148673786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_148674308_148676466_148676592_148678700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022034	chr6	-	1837	1	ISM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	23596	0	10278	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCTCTGGTAAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	148824369	148822532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_148822500_148824400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022035	chr6	-	1966	2	ISM	ENSMUSG00000039985.15	ENSMUST00000203164.3	2442	5	6986	159	6986	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTGCCTGTAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	148827661	148822713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_148824529_148827510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022036	chr6	+	1272	3	ISM	ENSMUSG00000039958.18	ENSMUST00000111551.2	1558	5	2486	0	-14	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACTCAAGTGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	149045629	149052669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_149045941_149048655_149048787_149051839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022037	chr6	+	436	2	FSM	ENSMUSG00000039958.18	ENST00000538391.1	740	2	87	217	87	-217	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGACATAGCATTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	149045730	149052065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_149045941_149051839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022038	chr6	+	248	2	NNC	ENSMUSG00000039958.18	novel	740	2	NA	NA	185	-301	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGTCTTCATCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	149045828	149051981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr6_+_149045941_149051845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022039	chr6	+	253	1	ISM	ENSMUSG00000039958.18	ENSMUST00000179873.8	1576	4	9021	380	6388	2	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTGGTGGATTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	149052031	149052284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_149052000_149052300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022040	chr6	-	612	5	ISM	ENSMUSG00000068250.14	ENST00000541931.5	631	6	5087	-1	5087	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGGCTGATCTCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	149085036	149059249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022041	chr6	+	2569	2	ISM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	15290	6994	-694	-6994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGAGTTCCCTTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	149226261	149229434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr6_+_149226299_149226902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022042	chr6	+	851	2	FSM	ENSMUSG00000003452.16	ENST00000550207.1	846	2	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGTGAATAACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	149310922	149311879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr6_+_149311140_149311245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022043	chr7	+	891	1	FSM	ENSMUSG00000107470.3	ENSMUST00000203929.3	795	1	0	-96	0	96	mono-exon	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	3230841	3231732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3230800_3231700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022044	chr7	-	1748	4	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	8379	10649	8379	-10649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCCTTGGAAGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	3289777	3281795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3281888_3282504_3282676_3283783_3283951_3288459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022045	chr7	-	1637	3	ISM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	23	17691	23	-17691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCTCAACGAAGAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	3298133	3288837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3290141_3293958_3294040_3297880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022046	chr7	-	1318	2	NNC	ENSMUSG00000078817.5	novel	2977	9	NA	NA	4116	-17750	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATGGTTTTTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	3294040	3288896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_3290133_3293958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022047	chr7	+	1355	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	0	1458	0	-394	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTCCACAGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	3339058	3346407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3339156_3341727_3341816_3345237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022048	chr7	+	406	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	9	3612	9	-1455	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTAATATCCACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3339108	3345346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3339318_3341727_3341816_3345237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022049	chr7	+	1159	1	ISM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	7609	1091	5090	2	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGACTCATGCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3346708	3347867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3346700_3347900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022050	chr7	+	314	1	ISM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	9545	0	7026	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTCCAGTTCATAGCG	NA	NA	NA	NA	NA	NA	NA	NA	3348644	3348958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3348600_3349000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022051	chr7	+	318	2	ISM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	21	26038	21	-26025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAAGGTAAGAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3352181	3352845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3352476_3352821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022052	chr7	+	338	3	ISM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	8739	16194	8739	-16181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGGTGGCCGATGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	3360899	3362689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3361062_3362213_3362349_3362648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022053	chr7	+	286	3	ISM	ENSMUSG00000078816.11	ENST00000683513.1	2274	17	19931	464	19808	-464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGGCTTTTTCCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	3371968	3378406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3372111_3375931_3376013_3378343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022054	chr7	+	410	3	ISM	ENSMUSG00000078816.11	ENST00000683513.1	2274	17	23915	0	23792	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCCAGTGCTCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	3375952	3378870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3376013_3378343_3378485_3378661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022055	chr7	+	210	1	NIC	ENSMUSG00000078816.11	novel	2274	17	NA	NA	26500	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCCAGTGCTCCCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	3378660	3378870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_3378700_3378900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022056	chr7	+	239	1	NIC	ENSMUSG00000107985.2	novel	506	4	NA	NA	23425	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAAAGGCAGTCGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	3523297	3523536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_3523300_3523500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022057	chr7	+	483	3	ISM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	243	-2	230	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATCTGTTTATTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	3620614	3623328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3620691_3622428_3622507_3622999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022058	chr7	+	136	2	ISM	ENSMUSG00000035674.14	ENSMUST00000108644.8	351	4	2067	95	2067	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGCCACCCTCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	3622451	3623032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3622507_3622951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022059	chr7	+	330	1	NIC	ENSMUSG00000035674.14	novel	515	4	NA	NA	2612	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAATCTGTTTATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3622996	3623326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_3623000_3623300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022060	chr7	-	360	2	ISM	ENSMUSG00000006335.17	ENST00000391757.1	708	5	8102	-14	8102	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	NA	NA	NA	NA	NA	NA	NA	3623984	3623322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3623474_3623775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022061	chr7	-	602	5	FSM	ENSMUSG00000006335.17	ENST00000391757.1	708	5	107	-1	107	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCCTATGTACACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3631979	3623335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_3623474_3623775_3623946_3624061_3624132_3627597_3627669_3631826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022062	chr7	-	555	2	ISM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	16	8525	16	-8511	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGCCGGGAGATCGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	3632867	3631847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3632086_3632550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022063	chr7	+	1993	4	ISM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	8871	0	8299	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTCAATACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	3641854	3645485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3641930_3642574_3642704_3642787_3642887_3643795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022064	chr7	+	674	1	ISM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	11828	0	11256	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTCAATACTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	3644811	3645485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3644800_3645500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022065	chr7	+	585	3	ISM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	13313	0	6858	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	3661663	3664108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3661741_3662379_3662506_3663726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022066	chr7	-	1212	1	Genic_Genomic	ENSMUSG00000078813.4	novel	NA	NA	NA	NA	4533	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGCACCATCAATACTTA	NA	NA	NA	NA	NA	NA	NA	NA	3664306	3663094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_3663100_3664300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022067	chr7	-	679	1	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	15056	0	15056	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	NA	NA	NA	NA	NA	NA	NA	NA	3681466	3680787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3680800_3681500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022068	chr7	-	714	3	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	7719	655	7719	-655	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTCCAGTTCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	3688803	3681442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3681849_3686807_3686985_3688672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022069	chr7	-	714	2	ISM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	105	14294	105	-14294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATCTCCATCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3696417	3695081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3695118_3695739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022070	chr7	+	1714	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	65	0	65	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTACAACAATCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	3696438	3704023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022071	chr7	+	997	4	FSM	ENSMUSG00000035585.17	ENST00000653273.2	928	4	-69	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGACTGTGTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	3697521	3703714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3697844_3697976_3698227_3698383_3698621_3703526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022072	chr7	+	821	3	ISM	ENSMUSG00000035585.17	ENSMUST00000038521.14	1365	5	1275	110	444	15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTTCCAAATTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	3698038	3703901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3698227_3698362_3698621_3703526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022073	chr7	+	486	1	NIC	ENSMUSG00000035585.17	novel	1779	5	NA	NA	5930	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTATTTTGAGTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	3703524	3704010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_3703500_3704000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022074	chr7	+	755	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGCCTCTGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	3706991	3709900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022075	chr7	+	753	4	FSM	ENSMUSG00000006333.15	ENSMUST00000108625.8	914	4	161	0	-107	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTCCAGCTGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	3707211	3709856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022076	chr7	+	683	4	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3707323	3709896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_3707448_3707644_3707770_3708731_3708919_3709649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022077	chr7	+	672	4	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3707324	3709896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_3707448_3707644_3707760_3708731_3708919_3709649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022078	chr7	+	628	4	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3707373	3709896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_3707448_3707647_3707768_3708731_3708919_3709649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022079	chr7	+	594	4	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3707397	3709896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_3707448_3707644_3707768_3708731_3708919_3709662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022080	chr7	+	332	2	ISM	ENSMUSG00000006333.15	ENSMUST00000108623.8	1347	5	1696	742	1409	-228	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCCAGGCACTCAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	3708732	3709152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3708919_3709006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022081	chr7	+	214	1	ISM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	2689	2	2357	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTATTGGTGTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	3709680	3709894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_3709700_3709900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022082	chr7	-	454	2	ISM	ENSMUSG00000058818.14	ENSMUST00000078451.7	3824	15	3571	4692	3571	-4692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTCAAGACTCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3719810	3719099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3719336_3719592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022083	chr7	-	237	1	NIC	ENSMUSG00000058818.14	novel	3824	15	NA	NA	4044	-4693	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3719337	3719100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_3719100_3719300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022084	chr7	-	237	1	NIC	ENSMUSG00000080917.3	novel	1881	7	NA	NA	3423	-7089	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3799207	3798970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_3799000_3799200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022085	chr7	-	399	2	ISM	ENSMUSG00000089942.10	ENSMUST00000119469.2	2021	9	3409	2783	3409	-2783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3844641	3843983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_3844219_3844477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022086	chr7	-	237	1	NIC	ENSMUSG00000089942.10	novel	3462	10	NA	NA	3830	-2783	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3844220	3843983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_3844000_3844200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022087	chr7	-	937	4	FSM	ENSMUSG00000074417.10	ENST00000396327.7	936	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGTCCTGACATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	3900422	3896977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_3897283_3897541_3897839_3899939_3900246_3900393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022088	chr7	-	904	3	NNC	ENSMUSG00000074417.10	novel	936	4	NA	NA	175	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGTCCTGACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	3900247	3896978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_3897278_3897541_3897839_3899939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022089	chr7	-	908	3	NNC	ENSMUSG00000074417.10	novel	936	4	NA	NA	175	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGTCCTGACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	3900247	3896978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_3897278_3897537_3897839_3899939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022090	chr7	-	902	3	NNC	ENSMUSG00000074417.10	novel	936	4	NA	NA	175	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGTCCTGACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	3900247	3896978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_3897283_3897541_3897839_3899946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022091	chr7	-	1104	4	FSM	ENSMUSG00000074417.10	ENST00000245621.6	1106	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3898772	3897047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_3897283_3897541_3897857_3898092_3898375_3898500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022092	chr7	-	237	1	NIC	ENSMUSG00000074417.10	novel	2128	10	NA	NA	1490	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3897284	3897047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_3897000_3897300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022093	chr7	-	237	1	NIC	ENSMUSG00000030427.18	novel	2281	7	NA	NA	3771	-2863	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTCAAGACTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	3914713	3914476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_3914500_3914700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022094	chr7	+	233	2	ISM	ENSMUSG00000035545.14	ENST00000376514.6	2196	13	4841	1623	4841	-1623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCAAGGGTCGGGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	4146534	4146857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4146697_4146786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022095	chr7	+	190	1	ISM	ENSMUSG00000035545.14	ENSMUST00000037472.13	5105	15	8243	2696	6597	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCACTCTGCTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4148290	4148480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4148300_4148500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022096	chr7	-	1018	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	9	-2	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATTCACTTTACGCGG	NA	NA	NA	NA	NA	NA	NA	NA	4167850	4154256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_4154787_4167091_4167187_4167457
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022097	chr7	-	655	1	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	19328	0	19328	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCATTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4429320	4428665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4428700_4429300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022098	chr7	-	805	3	ISM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	14137	1524	14137	-1524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGTCACTCTGGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	4434511	4430189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4430802_4433392_4433495_4434420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022099	chr7	+	1021	7	FSM	ENSMUSG00000006154.14	ENST00000588359.5	1026	7	14	-9	14	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCATTTGATCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	4476945	4481914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_4477213_4480328_4480459_4480562_4480695_4480888_4480998_4481138_4481314_4481617_4481751_4481839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022100	chr7	-	523	5	ISM	ENSMUSG00000019254.17	ENST00000435544.6	2119	20	7654	3288	7654	-3288	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGGGCAGGAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	4492893	4488248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022101	chr7	-	240	1	Genic_Genomic	ENSMUSG00000064179.14	novel	NA	NA	NA	NA	9561	2	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGAGTACAACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	4507806	4507566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_4507600_4507800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022102	chr7	-	365	3	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	6755	-186	6755	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGGAGTACAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4510612	4507567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4507800_4510381_4510423_4510520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022103	chr7	-	309	3	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	5243	2774	5243	-2774	internal_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGGTGAGACCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	4512124	4510527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4510612_4511472_4511583_4512009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022104	chr7	-	310	3	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	4300	4255	4300	-4255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTAGCCTGTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4513067	4512008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4512124_4512556_4512635_4512950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022105	chr7	-	268	3	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	3985	4797	3985	-4797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCTTTCCCTATAGG	NA	NA	NA	NA	NA	NA	NA	NA	4513382	4512550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4512635_4512950_4513068_4513315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022106	chr7	-	876	5	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	7076	-15	7076	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	4680891	4663519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022107	chr7	-	332	1	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	24116	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	4663851	4663519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_4663500_4663900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022108	chr7	-	887	4	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	397	4166	397	-4166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAGATGGCCTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	4687570	4667700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4667858_4680705_4680931_4684842_4685048_4687270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022109	chr7	-	636	4	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	3	17332	3	-17332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGCTGGAGGGCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	4687964	4680866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4680931_4684842_4685048_4687270_4687566_4687892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022110	chr7	-	443	2	ISM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	30	23751	30	-23736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGTATGAGGACCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	4688037	4687270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4687569_4687892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022111	chr7	+	402	3	ISM	ENSMUSG00000059851.16	ENST00000630497.1	1881	7	18	4385	18	-4385	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGGCAAGGCTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	4744852	4746109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4744981_4745617_4745728_4745945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022112	chr7	+	415	4	ISM	ENSMUSG00000059851.16	ENST00000630497.1	1881	7	779	1577	779	-1577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCTATACCTGTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	4745613	4748917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4745728_4745945_4746110_4746245_4746266_4748800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022113	chr7	+	401	3	NIC	ENSMUSG00000059851.16	novel	1881	7	NA	NA	1196	-1234	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGTGCCTGTTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	4746030	4749260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_4746110_4748800_4748938_4749075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022114	chr7	+	343	3	ISM	ENSMUSG00000059851.16	ENST00000630497.1	1881	7	1410	1234	1410	-1234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGTGCCTGTTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	4746244	4749260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4746266_4748800_4748938_4749075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022115	chr7	+	626	3	ISM	ENSMUSG00000059851.16	ENST00000630497.1	1881	7	3986	795	3986	-795	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTTACCCGCCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	4748820	4749699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4748938_4749075_4749261_4749375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022116	chr7	+	379	1	ISM	ENSMUSG00000059851.16	ENSMUST00000098853.9	2189	9	7006	15	5285	4	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTAAGTCCTTAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	4750119	4750498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4750100_4750500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022117	chr7	-	1375	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCACCTCCAGTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	4792655	4787555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_4788279_4792003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022118	chr7	+	1111	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCCTTTATATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4795871	4798069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022119	chr7	+	1100	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	4	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTCCTTTATATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4795876	4798068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797067_4797182_4797416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022120	chr7	+	1098	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTCCTTTATATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4795878	4798068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797177_4797416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022121	chr7	+	1091	5	NNC	ENSMUSG00000030432.13	novel	1106	5	NA	NA	8	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTCCTTTATATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4795880	4798068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_4795998_4796319_4796399_4796501_4796626_4797062_4797182_4797416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022122	chr7	+	163	2	ISM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	313	968	313	-968	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACCGTCGGAGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	4796301	4796557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4796409_4796501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022123	chr7	-	409	2	ISM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	2021	210	2021	-210	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAGCGAGATAAGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	4813568	4811222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4811484_4813420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022124	chr7	-	309	2	ISM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	138	3524	138	-3524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGCCCCACATCATCCGC	NA	NA	NA	NA	NA	NA	NA	NA	4815451	4814536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_4814556_4815161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022125	chr7	+	1834	2	FSM	ENSMUSG00000074406.6	ENST00000391718.3	3042	2	125	1083	125	-1083	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTCACTTGAAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	4921895	4923813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_4921952_4922035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022126	chr7	+	1797	1	ISM	ENSMUSG00000074406.6	ENSMUST00000116354.4	3523	3	4886	103	1331	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCCCTCCCCGCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	4923101	4924898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_4923100_4924900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022127	chr7	-	2014	1	FSM	ENSMUSG00000051550.11	ENSMUST00000162731.2	2489	1	475	0	475	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGAGTGAGGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4997864	4995850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_4995800_4997900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022128	chr7	-	1803	1	Genic_Genomic	ENSMUSG00000061374.15	novel	NA	NA	NA	NA	4378	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTTTTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	5011859	5010056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_5010100_5011900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022129	chr7	-	2068	2	ISM	ENSMUSG00000061374.15	ENSMUST00000208944.2	2306	3	216	208	216	76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGTCTGACCCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	5016021	5010481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_5012205_5015676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022130	chr7	+	420	1	ISM	ENSMUSG00000051184.8	ENSMUST00000207901.2	1263	3	3653	1	2261	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCACTGTGTGTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5021066	5021486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_5021100_5021500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022131	chr7	+	296	1	Genic_Genomic	ENSMUSG00000055633.7	novel	NA	NA	NA	NA	1440	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTTCTTACTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	5056427	5056723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_5056400_5056700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022132	chr7	+	373	2	ISM	ENSMUSG00000035203.17	ENST00000411543.6	1749	9	6174	4900	6167	-4900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGCACCGTGGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	5092920	5095965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_5093168_5095839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022133	chr7	+	382	2	ISM	ENSMUSG00000035203.17	ENST00000411543.6	1749	9	10154	2612	10147	-2612	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGAGCACCACCATACT	NA	NA	NA	NA	NA	NA	NA	NA	5096900	5098253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_5096982_5097952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022134	chr7	+	414	3	ISM	ENSMUSG00000035203.17	ENST00000411543.6	1749	9	11902	490	11895	-490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCCAAGGCTTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	5098648	5100375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_5098753_5098886_5098974_5100152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022135	chr7	+	643	3	ISM	ENSMUSG00000035203.17	ENST00000411543.6	1749	9	12137	0	12130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCCCTCCCCCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5098883	5100865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_5098974_5100152_5100411_5100570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022136	chr7	+	299	1	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	13816	3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTCCCCCACAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	5100569	5100868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_5100600_5100900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022137	chr7	-	853	1	ISM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	23628	0	18705	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCCTGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	6135342	6134489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_6134500_6135300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022138	chr7	-	573	3	FSM	ENSMUSG00000046792.9	ENSMUST00000207628.2	576	3	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACAACTCGAAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	6158995	6145286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_6145619_6146060_6146150_6158843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022139	chr7	+	797	3	ISM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	11415	603	9893	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGACCTTTCGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	6186926	6192817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_6187202_6191132_6191242_6192404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022140	chr7	+	430	1	ISM	ENSMUSG00000044876.16	ENSMUST00000108567.9	5104	5	17511	3389	15958	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGACTCTCCGGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6192991	6193421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_6193000_6193400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022141	chr7	+	402	1	ISM	ENSMUSG00000044876.16	ENSMUST00000108567.9	5104	5	18467	2461	16914	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCGGTTCTCGTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	6193947	6194349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_6193900_6194300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022142	chr7	-	122	1	NIC	ENSMUSG00000108949.2	novel	317	3	NA	NA	650	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGCTATCCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6285959	6285837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_6285800_6286000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022143	chr7	+	1362	1	ISM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	16294	774	8210	18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATTTGAAAGGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	6382572	6383934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_6382600_6383900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022144	chr7	-	532	1	Genic_Genomic	ENSMUSG00000062116.11	novel	NA	NA	NA	NA	6268	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAATGACTCTTGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	7118219	7117687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_7117700_7118200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022145	chr7	-	559	2	ISM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	4777	1051	4777	-1051	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATTTCTCATCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	7119710	7118739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_7119200_7119611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022146	chr7	-	445	1	ISM	ENSMUSG00000000605.10	ENSMUST00000000619.8	4607	13	16780	0	14128	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7285752	7285307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_7285300_7285800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022147	chr7	-	544	2	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	9121	852	9121	209	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGGCACATTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	7290759	7286844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_7287274_7290644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022148	chr7	-	548	2	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	6294	5921	6294	-4813	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGGTTTGCCCAGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	7293586	7291913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_7292273_7293397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022149	chr7	-	604	2	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	5056	7403	5056	-6295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCATAGGTGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	7294824	7293395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_7293585_7294409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022150	chr7	-	525	3	ISM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	2925	8561	2925	-7453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCAACGACCCCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	7296955	7294553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_7294956_7296036_7296118_7296913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022151	chr7	-	468	2	FSM	ENSMUSG00000030393.9	ENST00000339656.8	460	2	-5	-3	-5	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTCAGTGCTCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	10224308	10223755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_10224023_10224107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022152	chr7	-	467	2	NIC	ENSMUSG00000030393.9	novel	460	2	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTAGTCAGTGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	10224306	10223758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_10224023_10224103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022153	chr7	-	455	2	NNC	ENSMUSG00000030393.9	novel	460	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTAGTCAGTGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	10224301	10223758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_10224023_10224110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022154	chr7	-	453	2	NNC	ENSMUSG00000030393.9	novel	460	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTAGTCAGTGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	10224301	10223758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_10224023_10224112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022155	chr7	-	329	1	ISM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	5217	2620	195	3	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACACATGTGGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	10224104	10223775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_10223800_10224100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022156	chr7	-	435	2	NNC	ENSMUSG00000030393.9	novel	438	2	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGACACATGTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10224292	10223778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_10224023_10224101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022157	chr7	+	340	2	Antisense	novelGene_ENSMUSG00000030393.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTCCAGTATGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	10223778	10224203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_10224047_10224131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022158	chr7	-	607	1	ISM	ENSMUSG00000034071.16	ENSMUST00000080348.12	2591	4	6597	395	2504	6	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGTAGTGATTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	12150081	12149474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12149500_12150100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022159	chr7	-	595	2	ISM	ENSMUSG00000034071.16	ENST00000610548.2	708	3	2345	-2	2345	2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGAATGTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	12150240	12149478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12150058_12150224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022160	chr7	-	714	2	NNC	ENSMUSG00000034071.16	novel	878	2	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGAATGTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	12152590	12149478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_12150072_12152469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022161	chr7	+	709	2	Antisense	novelGene_ENSMUSG00000034071.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACATCCTATCACAATG	NA	NA	NA	NA	NA	NA	NA	NA	12149478	12152584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_12150077_12152473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022162	chr7	+	707	2	Antisense	novelGene_ENSMUSG00000034071.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGACACATCCTATCAC	NA	NA	NA	NA	NA	NA	NA	NA	12149478	12152580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_12150079_12152473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022163	chr7	+	653	2	Antisense	novelGene_ENSMUSG00000034071.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGACACATCCTATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	12149528	12152582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_12150061_12152461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022164	chr7	-	640	2	NIC	ENSMUSG00000034071.16	novel	708	3	NA	NA	2	-35	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCAGAGTGCTAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	12152583	12149531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_12150058_12152469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022165	chr7	-	199	2	NNC	ENSMUSG00000034071.16	novel	878	2	NA	NA	30	-646	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCCGAGTGTGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	12152555	12150142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_12150256_12152469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022166	chr7	+	1307	1	ISM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	14510	0	13788	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGACTATAGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	12583197	12584504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12583200_12584500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022167	chr7	+	420	3	ISM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	-1	1084	-1	-1074	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTTGTCCTTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	12656215	12659529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12656316_12656899_12657009_12659318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022168	chr7	+	522	4	ISM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	64	815	36	-806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGGCTTGTGAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	12656280	12659797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022169	chr7	+	296	2	ISM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	666	1124	638	-1115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCATGCCTTTGAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	12656882	12659488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12657009_12659318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022170	chr7	-	323	2	Antisense	novelGene_ENSMUSG00000012848.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGGAGAATGGCAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	12659528	12656893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_-_12657003_12659314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022171	chr7	+	716	5	ISM	ENSMUSG00000012848.16	ENST00000598495.5	773	6	652	-11	652	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGTGCTTGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	12656896	12660614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12657009_12659268_12659529_12659663_12659793_12660322_12660422_12660498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022172	chr7	+	414	3	NNC	ENSMUSG00000012848.16	novel	794	6	NA	NA	3087	-188	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGGTGGGTCAGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	12659331	12660415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_12659524_12659663_12659793_12660322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022173	chr7	+	287	2	NNC	ENSMUSG00000012848.16	novel	794	6	NA	NA	3115	-810	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCAGAGGCTTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	12659359	12659793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_12659529_12659675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022174	chr7	+	257	3	NNC	ENSMUSG00000012848.16	novel	761	6	NA	NA	3496	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	12659740	12660613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_12659784_12660322_12660422_12660498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022175	chr7	+	117	1	NIC	ENSMUSG00000012848.16	novel	761	6	NA	NA	4252	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	12660496	12660613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_12660500_12660600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022176	chr7	+	406	2	ISM	ENSMUSG00000004500.10	ENSMUST00000210619.2	447	3	-81	1790	-81	-1790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGCCTGAGTTGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	12699948	12702849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12700227_12702721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022177	chr7	+	342	1	ISM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	7643	0	7378	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAGTCAGCACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	12707407	12707749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12707400_12707700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022178	chr7	+	1076	3	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	-87	5248	81	-5248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGATTTGTAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	12758159	12759704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12758989_12759230_12759344_12759570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022179	chr7	+	356	3	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	1012	3271	770	-3271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGAAGGCACACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	12759258	12761681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12759344_12759570_12759704_12761543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022180	chr7	+	352	3	ISM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	1321	3113	1079	-3113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACTTCAGAAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	12759567	12761839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12759704_12761543_12761680_12761759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022181	chr7	+	337	3	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	3053	2923	3053	-2923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGGGGTCGAGTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	12761541	12762029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12761680_12761759_12761877_12761947
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022182	chr7	+	379	3	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	3271	2471	3271	-2471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTAGTGGTGGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	12761759	12762481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12761877_12761947_12762063_12762334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022183	chr7	+	345	3	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	3870	2038	3870	-2038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCTGGGGAGAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	12762358	12762914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12762482_12762590_12762706_12762807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022184	chr7	+	341	2	NNC	ENSMUSG00000005566.15	novel	2582	15	NA	NA	4382	-1463	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCCCTTCCTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	12762870	12763489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_12762915_12763192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022185	chr7	+	302	2	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	4640	1432	4640	-1432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGATGTACAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	12763128	12763520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12763180_12763269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022186	chr7	+	536	2	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	4780	1068	4780	-1068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTGCCACCTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	12763268	12763884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12763523_12763602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022187	chr7	+	1015	5	ISM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	5115	-10	5115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	12763603	12764962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022188	chr7	+	333	1	ISM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	6544	7	6134	3	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTGCTCATGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	12764622	12764955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_12764600_12765000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022189	chr7	-	189	1	ISM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	2449	4	2442	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	12766129	12765940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12765900_12766100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022190	chr7	-	556	4	ISM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	1828	12	1821	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTAATTTACCAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	12766750	12765948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022191	chr7	-	588	4	ISM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	608	279	601	-214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGTTCCAAATCCACC	NA	NA	NA	NA	NA	NA	NA	NA	12767970	12766215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12766278_12766361_12766493_12766568_12766749_12767755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022192	chr7	-	494	3	ISM	ENSMUSG00000033916.6	ENST00000312547.7	817	6	2	567	2	-567	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCCCTCCCAATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	12768683	12766568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12766749_12767755_12767948_12768561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022193	chr7	-	496	3	ISM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	27	653	20	-588	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGCACTATGAACAGACA	NA	NA	NA	NA	NA	NA	NA	NA	12768551	12766589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12766749_12767755_12767970_12768428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022194	chr7	-	346	2	ISM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	5	1851	5	-1790	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCGGACATCAAAAAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	12768729	12767791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12767970_12768561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022195	chr7	-	650	2	ISM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	99	1327	99	-1327	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGTAAAACAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	12772101	12770491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12770588_12771547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022196	chr7	-	228	1	ISM	ENSMUSG00000030380.18	ENSMUST00000069289.15	3597	7	11269	965	9688	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACAGCACTGAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12777422	12777194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12777200_12777400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022197	chr7	-	257	2	ISM	ENSMUSG00000030380.18	ENST00000594234.5	2006	5	816	8464	816	-8464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGACCTATACAGAATATA	NA	NA	NA	NA	NA	NA	NA	NA	12786294	12785658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12785731_12786109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022198	chr7	-	293	2	ISM	ENSMUSG00000030380.18	ENST00000594234.5	2006	5	269	8978	269	-8978	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAGGAATTGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	12786841	12786172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_12786294_12786669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022199	chr7	+	420	4	FSM	ENSMUSG00000005649.18	ENST00000293255.3	421	4	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAGAGAGAGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	13132091	13142426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_13132296_13134629_13134661_13135155_13135243_13142328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022200	chr7	+	391	3	NNC	ENSMUSG00000005649.18	novel	421	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13132102	13142425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_13132310_13135155_13135243_13142328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022201	chr7	-	250	1	Genic_Genomic	ENSMUSG00000041571.11	novel	NA	NA	NA	NA	4949	4	mono-exon	FALSE	NA	NA	NA	NA	NA	466	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTTATTTTGGCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	15651378	15651128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_15651100_15651400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022202	chr7	-	358	3	ISM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	2284	149	2284	-149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCCCACCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	15654043	15651281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_15651465_15653772_15653872_15653967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022203	chr7	-	234	3	ISM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	2038	2640	2038	-2640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGGAGACTGTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	15654289	15653772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_15653872_15653967_15654043_15654229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022204	chr7	-	284	3	NNC	ENSMUSG00000041571.11	novel	736	6	NA	NA	8	-2833	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCGAGTCCTGCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	15656319	15653965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_15654043_15654229_15654284_15656166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022205	chr7	-	301	4	ISM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	5	2834	5	-2834	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCGAGTCCTGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	15656322	15653966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_15654043_15654229_15654284_15654373_15654399_15656176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022206	chr7	+	167	2	Antisense	novelGene_ENSMUSG00000041571.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCGTGCGCACAGCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	15654229	15656278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_15654281_15656162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022207	chr7	+	194	2	Antisense	novelGene_ENSMUSG00000041571.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGACTGCCTCACGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	15654229	15656291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_15654295_15656162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022208	chr7	-	2194	6	ISM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	6523	-12	6523	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTATCGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15673476	15670095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022209	chr7	-	1404	1	ISM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	19206	0	19206	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTGGACTCCGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	15682286	15680882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_15680900_15682300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022210	chr7	-	1447	2	ISM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	15332	2558	15332	-2558	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTTCAGAGCAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	15686160	15683440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_15684718_15685990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022211	chr7	+	224	3	ISM	ENSMUSG00000006024.14	ENST00000595227.5	1220	10	3	4382	3	-4382	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTTGCTTGCTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	15832603	15846556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_15832700_15841477_15841558_15846508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022212	chr7	+	226	3	ISM	ENSMUSG00000006024.14	ENST00000595227.5	1220	10	14435	3447	14435	-3447	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGGCTGTCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	15847035	15847491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_15847115_15847274_15847331_15847400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022213	chr7	+	226	3	ISM	ENSMUSG00000006024.14	ENST00000595227.5	1220	10	14694	2788	14694	-2788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCCCACCAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	15847294	15848150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_15847331_15847400_15847486_15848045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022214	chr7	+	1112	5	ISM	ENSMUSG00000006024.14	ENST00000595227.5	1220	10	14812	-264	14812	264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCACCCTGCAGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	15847412	15851202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022215	chr7	+	231	1	ISM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	18327	960	18109	2	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTGCCTTGGCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	15850709	15850940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_15850700_15850900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022216	chr7	+	867	1	Genic_Genomic	ENSMUSG00000006024.14	novel	NA	NA	NA	NA	18436	3	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCACATCTCATTCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	15851036	15851903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_15851000_15851900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022217	chr7	-	137	1	ISM	ENSMUSG00000006019.16	ENSMUST00000121123.8	3880	17	24754	0	24710	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTAATTGTTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	15931208	15931071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_15931100_15931200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022218	chr7	-	177	2	ISM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	3909	19227	3909	-19227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATCCAGCGTGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	15952009	15950375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_15950456_15951912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022219	chr7	-	1557	1	FSM	ENSMUSG00000091811.3	ENSMUST00000169612.3	1605	1	56	-8	56	8	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTCTGCTCTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	16007486	16005929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_16005900_16007500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022220	chr7	-	279	1	Genic_Genomic	ENSMUSG00000052833.10	novel	NA	NA	NA	NA	60460	3	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCCTCTGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	16061250	16060971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_16061000_16061200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022221	chr7	-	563	4	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	28642	640	28642	-640	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGCTCCCTTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	16093068	16061614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022222	chr7	-	332	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	20877	9665	20877	-9665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCCGATGACTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	16100833	16070639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16070764_16092960_16093067_16100731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022223	chr7	-	350	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	19133	31986	19133	-31986	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACCTGGAGATGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	16102577	16092960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16093067_16100731_16100832_16102433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022224	chr7	-	390	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	17321	39788	17321	-39788	internal_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTCATCAGAGACAACCA	NA	NA	NA	NA	NA	NA	NA	NA	16104389	16100762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16100832_16102433_16102577_16104211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022225	chr7	-	339	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	9306	41552	9306	-41552	internal_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTCACAGAAACAGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	16112404	16102526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16102577_16104211_16104386_16112289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022226	chr7	-	355	3	ISM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	0	43313	0	-43313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATGGTGGATGTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	16121710	16104287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16104386_16112289_16112402_16121565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022227	chr7	+	816	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGACTCTGAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	16186702	16189415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_16187096_16188045_16188139_16189085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022228	chr7	+	814	3	NNC	ENSMUSG00000019158.10	novel	815	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGACTCTGAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	16186708	16189415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_16187100_16188045_16188139_16189085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022229	chr7	+	829	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	12	-5	12	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAGCCCTCATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	16472346	16483224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022230	chr7	+	387	1	NIC	ENSMUSG00000008036.12	novel	836	5	NA	NA	10464	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	16482832	16483219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_16482800_16483200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022231	chr7	+	578	1	Genic_Genomic	ENSMUSG00000001918.18	novel	NA	NA	NA	NA	16358	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTGTCACATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	16531622	16532200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_16531600_16532200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022232	chr7	-	691	1	ISM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	6796	0	6796	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACAGCTTGTTCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	16543861	16543170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16543200_16543900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022233	chr7	-	757	2	ISM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	1626	2017	1626	-2017	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGCCCTGCGCGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	16549031	16545187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16545902_16548988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022234	chr7	-	648	1	Genic_Genomic	ENSMUSG00000019370.11	novel	NA	NA	NA	NA	7884	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGACTCTTCCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	16649950	16649302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_16649300_16650000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022235	chr7	-	1074	5	NNC	ENSMUSG00000019370.11	novel	554	5	NA	NA	26	558	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTGGGAAGAGGCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	16657808	16650280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16657742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022236	chr7	-	497	6	FSM	ENSMUSG00000019370.11	ENST00000594523.5	534	6	37	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGATCTCTTCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	16657797	16650846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651646_16653559_16653591_16657765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022237	chr7	-	357	3	ISM	ENSMUSG00000019370.11	ENST00000598871.5	554	5	0	470	0	-462	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGTCAGCCCTAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	16657869	16651308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16651418_16651509_16651654_16657765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022238	chr7	+	2203	1	FSM	ENSMUSG00000070802.6	ENSMUST00000094807.6	4147	1	1944	0	1944	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGTGGTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	16680550	16682753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_16680600_16682800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022239	chr7	-	342	1	ISM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	22935	0	22821	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	16738906	16738564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16738600_16738900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022240	chr7	-	511	3	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	21593	239	21593	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGAAGGCCAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	16740134	16738817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16739097_16739185_16739268_16739984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022241	chr7	-	309	3	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	20807	1406	20807	-1406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCTACCTCTCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	16740920	16739984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16740164_16740256_16740298_16740831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022242	chr7	-	441	4	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	19087	2251	19087	-2251	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGACTCAGGCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	16742640	16740829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16740920_16741028_16741172_16741650_16741757_16742538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022243	chr7	-	321	3	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	17813	3071	17813	-3071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGAGGGTTTCTCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	16743914	16741649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16741757_16742538_16742638_16743799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022244	chr7	-	173	2	ISM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	18854	3970	18740	-3956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTATCCCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	16742987	16742534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16742638_16742917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022245	chr7	-	374	3	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	12256	3956	12256	-3956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTATCCCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	16749471	16742534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16742638_16743799_16743922_16749322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022246	chr7	-	189	2	ISM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	17919	4353	17805	-4339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGCCCAGGATGGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	16743922	16742917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16742984_16743799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022247	chr7	-	465	3	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	5140	5274	5140	-5274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGCAGTGGTACAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	16756587	16743852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16743922_16749322_16749471_16756339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022248	chr7	-	382	2	ISM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	-47	17778	-47	-17778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGACTACGAGACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	16761774	16756356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_16756582_16761617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022249	chr7	+	1514	1	FSM	ENSMUSG00000108798.2	ENSMUST00000206656.2	1516	1	3	-1	3	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCCCTAATACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	17963704	17965218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_17963700_17965200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022250	chr7	-	257	1	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	19276	0	19276	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	18625064	18624807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18624800_18625100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022251	chr7	-	322	3	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	18314	105	18314	-105	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAGTCTCAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	18626026	18624912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18625099_18625239_18625313_18625963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022252	chr7	-	232	3	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	17886	1156	17886	-1156	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTCATTCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	18626454	18625963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18626025_18626198_18626278_18626362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022253	chr7	-	388	3	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	17065	1555	17065	-1555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAGCCCGGAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	18627275	18626362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18626509_18626922_18626999_18627109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022254	chr7	-	251	2	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	16564	2300	16564	-2300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACCGACCCGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	18627776	18627107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18627274_18627691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022255	chr7	-	255	2	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	16285	2908	16285	-2908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCTGGCCATGTACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	18628055	18627715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18627775_18627859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022256	chr7	-	362	2	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	10699	3060	10699	-3060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGAGGTGAGGGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	18633641	18627867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18628071_18633482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022257	chr7	-	276	2	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	9336	8716	9336	-8716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGCTCGGGAGACGGA	NA	NA	NA	NA	NA	NA	NA	NA	18635004	18633523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18633639_18634843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022258	chr7	-	242	2	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	6863	10035	6863	-10035	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCACAGGGGCGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	18637477	18634842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18635002_18637394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022259	chr7	-	280	2	ISM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	161	12899	161	-12899	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGCTTGCGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	18644179	18637706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18637865_18644057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022260	chr7	+	1784	3	FSM	ENSMUSG00000048481.16	ENST00000322217.6	1885	3	13	88	-1	-88	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGTGTGTCTGACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	18725242	18735599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_18725280_18725982_18726546_18734415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022261	chr7	+	1213	1	ISM	ENSMUSG00000048481.16	ENSMUST00000131087.2	1951	3	9235	0	9235	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGGCTCTGAGACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	18734478	18735691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_18734500_18735700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022262	chr7	+	1822	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	912	0	912	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGTACTGAGATTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	18738880	18740702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_18738900_18740700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022263	chr7	+	860	2	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	10	8394	10	-8394	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCACACACATCAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	18791417	18799811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_18791698_18799231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022264	chr7	+	980	4	ISM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	8016	99	8016	-99	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTGAAGGCTGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	18799423	18808106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_18799997_18801013_18801159_18801958_18802077_18807962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022265	chr7	+	751	1	ISM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	3205	0	3205	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGACTGGATTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	18831723	18832474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_18831700_18832500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022266	chr7	-	249	2	ISM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	5996	1459	5996	-1459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTAGCCTGCAGCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	18877220	18875085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18875225_18877110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022267	chr7	-	254	2	ISM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	4253	4959	4253	-4959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGGAGGGCAGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	18878963	18878585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18878685_18878808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022268	chr7	-	234	2	ISM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	771	7361	771	-7361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGAACGTGGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	18882445	18880987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18881077_18882300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022269	chr7	-	301	2	ISM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	159	8674	159	-8674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGGTTTTATTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	18883057	18882300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18882445_18882900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022270	chr7	+	1432	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	-9	-3	-9	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTCTTTTGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	18883637	18887470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_18883820_18885142_18885323_18886400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022271	chr7	+	1403	3	NNC	ENSMUSG00000040824.4	novel	1420	3	NA	NA	15	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTCTCTTTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	18883661	18887468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_18883820_18885145_18885323_18886400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022272	chr7	+	386	2	FSM	ENSMUSG00000040824.4	ENST00000590212.1	382	2	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCCCTGCCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	18885139	18886576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_18885323_18886373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022273	chr7	+	209	1	NIC	ENSMUSG00000040824.4	novel	1420	3	NA	NA	1226	2	mono-exon	FALSE	NA	NA	NA	NA	NA	547	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTCCCTGCCCTGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	18886368	18886577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_18886400_18886600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022274	chr7	+	822	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	0	2544	0	-2544	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAGAAGCCTTCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	18962258	18979249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_18962510_18978678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022275	chr7	+	576	1	ISM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	18959	0	18910	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCTTCAATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	18981217	18981793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_18981200_18981800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022276	chr7	-	828	1	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	14061	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	18991681	18990853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_18990900_18991700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022277	chr7	-	853	2	ISM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	13912	17	13912	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTATAAATGCAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	18991830	18990870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_18991680_18991786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022278	chr7	+	706	5	ISM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	2586	2	2586	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCATTCTGTGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	19027579	19030083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022279	chr7	-	847	1	Genic_Genomic	ENSMUSG00000047649.10	novel	NA	NA	NA	NA	2628	7	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTACTTTTGATACATG	NA	NA	NA	NA	NA	NA	NA	NA	19090778	19089931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_19089900_19090800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022280	chr7	-	962	2	ISM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	267	1166	267	-1166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCCCCTGGAGTACTCA	NA	NA	NA	NA	NA	NA	NA	NA	19093139	19091104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19091942_19093014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022281	chr7	+	1116	4	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	8562	4268	8562	-4268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGTCTCCCATGAATG	NA	NA	NA	NA	NA	NA	NA	NA	19103723	19105548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_19104230_19104313_19104413_19104490_19104583_19105129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022282	chr7	+	979	3	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	9346	2506	9346	-2506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCATAGGAGGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	19104507	19107310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_19104583_19105129_19105572_19106848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022283	chr7	+	1041	3	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	9966	506	9966	-506	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCCTTCCACCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	19105127	19109310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_19105572_19106848_19107310_19109174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022284	chr7	+	2122	4	ISM	ENSMUSG00000030399.3	ENSMUST00000208710.2	2742	8	5693	-1	5655	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGTTGATCTTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	19150642	19156767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_19150816_19153363_19153488_19154031_19154222_19155132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022285	chr7	-	245	1	ISM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	3637	0	3637	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCATTCCTAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	19238655	19238410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19238400_19238700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022286	chr7	+	3267	4	FSM	ENSMUSG00000060621.7	ENST00000317951.6	3263	4	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGCAAAGACAGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	19253724	19322813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_19254177_19255858_19255991_19256895_19259544_19322778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022287	chr7	-	732	1	NIC	ENSMUSG00000044709.7	novel	1023	3	NA	NA	7291	0	mono-exon	FALSE	NA	NA	NA	NA	NA	238	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	19299602	19298870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_19298900_19299600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022288	chr7	-	1001	3	FSM	ENSMUSG00000044709.7	ENSMUST00000117222.2	1023	3	5	17	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTGGCCTTGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	19307743	19298887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_19299602_19307233_19307470_19307692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022289	chr7	-	864	2	NNC	ENSMUSG00000044709.7	novel	763	2	NA	NA	-141	60	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATCTCTCTTGTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	19307451	19298951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_19299598_19307233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022290	chr7	+	315	2	ISM	ENSMUSG00000011267.9	ENST00000303809.7	1090	3	515	688	515	-688	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGTGCAAGAAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	19311820	19313787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_19311886_19313537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022291	chr7	+	307	1	ISM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	2958	105	2864	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTGAGCCATATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	19314169	19314476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_19314200_19314500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022292	chr7	-	676	3	ISM	ENSMUSG00000061028.8	ENST00000221455.8	2021	19	16371	4049	16371	-4049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCGCCCCCAAGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	19320853	19319083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19319273_19320265_19320536_19320636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022293	chr7	-	512	4	ISM	ENSMUSG00000061028.8	ENST00000221455.8	2021	19	14639	5317	14639	-5317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCAGACGGCGGTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	19322585	19320351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19320536_19320636_19320853_19321749_19321792_19322515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022294	chr7	-	381	1	ISM	ENSMUSG00000002983.18	ENSMUST00000094762.10	2209	12	22841	0	22841	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	19340522	19340141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19340100_19340500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022295	chr7	-	426	3	ISM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	65	13431	65	-13425	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGTACCTGGTCATCACA	NA	NA	NA	NA	NA	NA	NA	NA	19363298	19353572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19353768_19361847_19361896_19363115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022296	chr7	-	463	1	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	33000	0	33000	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCCCCAACTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	19365958	19365495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19365500_19366000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022297	chr7	-	575	3	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	30052	2089	30052	-2089	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCACCACCACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	19368906	19367584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19367888_19367980_19368149_19368802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022298	chr7	-	558	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	29215	2485	29215	-2485	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCCCAGCGGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	19369743	19367980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19368149_19368802_19368939_19369232_19369329_19369585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022299	chr7	-	457	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	27861	3368	27861	-3368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACAAGGGCTGGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	19371097	19368863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19368939_19369232_19369329_19369585_19369777_19371002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022300	chr7	-	600	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	27320	3763	27320	-3763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTTCAACCAAAGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	19371638	19369258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19369329_19369585_19369777_19371002_19371097_19371393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022301	chr7	-	426	3	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	26016	5924	26016	-5924	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATGAGGAGCAGGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	19372942	19371419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19371639_19372041_19372163_19372856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022302	chr7	-	462	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	19032	6569	19032	-6569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCACCCCCACTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	19379926	19372064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19372163_19372856_19372943_19376976_19377095_19379766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022303	chr7	-	463	4	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	9254	11481	9254	-11481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTAACTTCCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	19389704	19376976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19377095_19379766_19379926_19380640_19380765_19389642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022304	chr7	-	889	1	Genic_Genomic	ENSMUSG00000002985.17	novel	NA	NA	NA	NA	1271	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCACTGAGCCACGCCC	NA	NA	NA	NA	NA	NA	NA	NA	19430921	19430032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_19430000_19430900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022305	chr7	-	956	2	ISM	ENSMUSG00000002985.17	ENSMUST00000173739.8	1221	3	757	48	617	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCTGGCCCTCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	19431575	19430244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19431029_19431403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022306	chr7	-	941	5	ISM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	4613	0	4600	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGAGGCCTCGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	19444750	19435237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022307	chr7	-	628	1	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	24745	0	24745	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGTGTTTTGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	19458713	19458085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19458100_19458700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022308	chr7	-	842	3	ISM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	18815	123	18815	-123	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTAGGGGACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	19464643	19458208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19458795_19463962_19464112_19464536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022309	chr7	-	613	5	FSM	ENSMUSG00000049848.8	ENST00000358777.9	610	5	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGCACAGAAGACAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	19620572	19612036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_19612106_19612753_19612811_19615738_19615825_19616499_19616533_19620204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022310	chr7	-	603	4	NNC	ENSMUSG00000049848.8	novel	610	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620567	19612038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_19612106_19612753_19612811_19615738_19615825_19620174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022311	chr7	-	588	4	NNC	ENSMUSG00000049848.8	novel	610	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620571	19612038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_19612106_19612753_19612811_19615738_19615825_19620193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022312	chr7	-	594	5	NIC	ENSMUSG00000049848.8	novel	610	5	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620559	19612038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_19612106_19612753_19612811_19615738_19615825_19616499_19616533_19620208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022313	chr7	+	1931	1	FSM	ENSMUSG00000108942.2	ENSMUST00000207134.2	2465	1	535	-1	535	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTATTCCTGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	19631793	19633724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_19631800_19633700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022314	chr7	-	564	1	ISM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	17019	0	17019	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	19638066	19637502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19637500_19638100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022315	chr7	-	615	2	ISM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	2281	13296	2281	-13296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTGGATCTGCGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	19652804	19650798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_19651096_19652486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022316	chr7	+	231	1	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCCACTGAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	23057774	23058005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr7_+_23057800_23058000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022317	chr7	-	636	1	FSM	ENSMUSG00000066724.4	ENSMUST00000086013.4	645	1	27	-18	27	18	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTATGAACATAGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	23646688	23646052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_23646100_23646700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022318	chr7	-	204	2	ISM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	340	7276	340	-7258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGTGGGTCGTACACC	NA	NA	NA	NA	NA	NA	NA	NA	23998760	23997739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_23997801_23998617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022319	chr7	-	758	1	FSM	ENSMUSG00000055826.6	ENSMUST00000069562.6	855	1	100	-3	100	3	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCGGGGCGTGGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	24033261	24032503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_24032500_24033300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022320	chr7	+	339	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	1	9148	1	-9148	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCGGGCGTCCTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	24161909	24166244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24161993_24164555_24164667_24166099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022321	chr7	+	417	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	2642	3912	2642	-3912	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTCCCATCTGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	24164550	24171480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24164667_24166099_24166244_24171323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022322	chr7	+	411	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	4215	3260	4215	-3260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGGAGCAGGAAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	24166123	24172132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24166244_24171323_24171480_24171997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022323	chr7	+	413	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	9440	1611	9440	-1611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCCTGTGGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24171348	24173781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24171480_24171997_24172133_24173634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022324	chr7	+	566	3	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	10089	445	10089	-445	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTCCATCTTTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	24171997	24174947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24172133_24173634_24173782_24174663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022325	chr7	+	320	1	Genic_Genomic	ENSMUSG00000046223.11	novel	NA	NA	NA	NA	13165	1	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTAGGTCTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	24175073	24175393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_24175100_24175400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022326	chr7	+	259	2	ISM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	3467	542	3467	-542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGGCTATAAGGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24210021	24214563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24210179_24214461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022327	chr7	+	694	2	ISM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	3597	0	3537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGAGCTGCGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24210091	24215107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24210179_24214500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022328	chr7	+	610	1	NIC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	7943	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGAGCTGCGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24214497	24215107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_24214500_24215100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022329	chr7	-	456	1	ISM	ENSMUSG00000066721.4	ENSMUST00000094705.3	2741	4	1665	1683	1665	1	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAGGGCCAGGGAGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	24285401	24284945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24284900_24285400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022330	chr7	-	899	3	ISM	ENSMUSG00000066721.4	ENST00000458714.2	1325	4	720	169	720	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCAAAGCGTTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	24294080	24285115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24285564_24286078_24286315_24293865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022331	chr7	-	674	3	ISM	ENSMUSG00000066721.4	ENST00000458714.2	1325	4	4	1162	4	-1162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCACCTGTCAGGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	24294796	24286108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24286315_24293865_24294073_24294535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022332	chr7	+	1487	8	FSM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTCTGCTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	24286964	24308350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_24287233_24293051_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022333	chr7	+	502	1	FSM	ENSMUSG00000091955.3	ENSMUST00000170837.3	485	1	-14	-3	-14	3	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATTAAACTCCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	24561623	24562125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_24561600_24562100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022334	chr7	+	656	4	ISM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	-2	1340	-2	-1336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCAGGGTTGTGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24583793	24587891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022335	chr7	+	416	3	NNC	ENSMUSG00000040952.17	novel	1284	5	NA	NA	57	-4250	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACTGAGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	24583852	24584977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_24584093_24584560_24584636_24584876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022336	chr7	+	632	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGGATCTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24584140	24589232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022337	chr7	+	366	3	ISM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	413	1340	413	-1336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCAGGGTTGTGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24584551	24587891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24584632_24584876_24584978_24587706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022338	chr7	+	323	3	NNC	ENSMUSG00000040952.17	novel	1284	5	NA	NA	445	-1338	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGCAGGGTTGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24584583	24587889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_24584632_24584876_24584978_24587715
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022339	chr7	+	297	3	NNC	ENSMUSG00000040952.17	novel	774	6	NA	NA	3569	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24587707	24589231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_24587891_24588331_24588387_24589172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022340	chr7	-	269	1	FSM	ENSMUSG00000098802.3	ENSMUST00000183435.3	66	1	59	-262	59	262	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTGGTATTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	24669441	24669172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_24669200_24669400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022341	chr7	-	461	3	ISM	ENSMUSG00000003380.12	ENSMUST00000205871.2	986	4	780	-12	730	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCTGGTATTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	24671283	24669173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24669435_24669511_24669614_24671185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022342	chr7	+	361	2	Antisense	novelGene_ENSMUSG00000098802.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAACAGATGGTGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	24669174	24669614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_24669437_24669515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022343	chr7	-	169	2	ISM	ENSMUSG00000003380.12	ENST00000601891.5	509	4	745	50	745	-50	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTCCTCCAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	24671268	24669348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24669435_24671185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022344	chr7	-	415	3	ISM	ENSMUSG00000003380.12	ENSMUST00000205871.2	986	4	323	325	273	-212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACAGGGTCTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	24671740	24669510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24669614_24671185_24671284_24671526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022345	chr7	-	301	3	NNC	ENSMUSG00000003380.12	novel	986	4	NA	NA	318	-279	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGCGTCTCTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	24671695	24669577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_24669614_24671185_24671284_24671528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022346	chr7	-	520	3	ISM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	-1	2029	-1	-1907	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAAGCTTGTACTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24672180	24671205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24671284_24671526_24671740_24671951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022347	chr7	+	3153	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	50	937	-29	75	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCATTCCTAGCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	24776679	24781980	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_24776812_24778959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022348	chr7	+	3087	1	Genic_Genomic	ENSMUSG00000045252.12	novel	NA	NA	NA	NA	3123	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGAGGGTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	24779831	24782918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_24779800_24782900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022349	chr7	-	903	1	ISM	ENSMUSG00000054499.10	ENSMUST00000058702.7	1828	5	16117	0	16117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	24903167	24902264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24902300_24903200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022350	chr7	-	700	1	ISM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	6151	1350	5630	2	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTGGCCTTCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	24944035	24943335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24943300_24944000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022351	chr7	-	910	3	ISM	ENSMUSG00000040857.16	ENST00000440177.6	2067	4	4030	948	4030	586	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCCGCCCATGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	24945635	24944285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24944957_24945058_24945175_24945512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022352	chr7	+	1765	9	ISM	ENSMUSG00000005442.14	ENST00000416803.1	1964	10	0	4301	0	1	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGAGGAAACCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	24984272	24987896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022353	chr7	-	231	2	Antisense	novelGene_ENSMUSG00000005442.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTTCGGTCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	24986365	24985387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_-_24985483_24986229
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022354	chr7	-	184	2	Antisense	novelGene_ENSMUSG00000005442.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGCCGTTCTGCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	24986599	24986326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_-_24986426_24986514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022355	chr7	+	503	3	ISM	ENSMUSG00000005442.14	ENST00000432801.1	1319	7	1621	235	1621	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCAGTCTCCACCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	24986514	24987660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24986752_24987174_24987279_24987498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022356	chr7	+	405	1	NIC	ENSMUSG00000005442.14	novel	8221	21	NA	NA	2597	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGGAGGAAACCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24987490	24987895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_24987500_24987900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022357	chr7	+	513	2	ISM	ENSMUSG00000005442.14	ENST00000416803.1	1964	10	3276	34	2655	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCAAGTGCGAGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	24987548	24992163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24987896_24991997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022358	chr7	+	134	2	NNC	ENSMUSG00000005442.14	novel	1319	7	NA	NA	2907	-157	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGCTAAATCTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	24987800	24992040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_24987896_24992001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022359	chr7	+	260	2	ISM	ENSMUSG00000005442.14	ENST00000444451.1	1684	9	7226	0	7179	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24992072	24992506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_24992207_24992380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022360	chr7	+	128	1	NIC	ENSMUSG00000005442.14	novel	8221	21	NA	NA	7485	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24992378	24992506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_24992400_24992500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022361	chr7	-	308	1	Genic_Genomic	ENSMUSG00000005447.13	novel	NA	NA	NA	NA	1957	1	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTTCTGCTTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	24994780	24994472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_24994500_24994800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022362	chr7	-	536	3	ISM	ENSMUSG00000005447.13	ENSMUST00000108410.8	689	5	873	34	873	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTCCCTTGATATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	24995864	24994507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24994802_24995545_24995669_24995745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022363	chr7	-	338	3	ISM	ENSMUSG00000005447.13	ENSMUST00000155118.2	679	5	753	156	128	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAGCCTTGGAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	24996609	24995546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24995669_24995745_24995863_24996510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022364	chr7	-	392	4	ISM	ENSMUSG00000005447.13	ENSMUST00000155118.2	679	5	464	195	-161	-195	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAACAAGCTGCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	24996898	24995585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24995669_24995745_24995863_24996510_24996601_24996796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022365	chr7	-	325	3	ISM	ENSMUSG00000005447.13	ENSMUST00000155118.2	679	5	-41	1120	8	-1120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGTCCACCCGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	24997403	24996510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_24996601_24996796_24996896_24997267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022366	chr7	-	1241	1	FSM	ENSMUSG00000003123.16	ENSMUST00000105177.3	1251	1	11	-1	11	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGTCTGTCGAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	25098123	25096882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_25096900_25098100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022367	chr7	-	593	1	FSM	ENSMUSG00000108518.2	ENSMUST00000206270.2	674	1	75	6	75	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAACAGGTCACTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	25119176	25118583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_25118600_25119200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022368	chr7	+	317	2	ISM	ENSMUSG00000057229.12	ENST00000589970.5	369	3	1427	-1	1427	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGAAGGGTCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25323235	25324328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25323364_25324139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022369	chr7	+	189	1	ISM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	5301	648	2331	1	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGAAGGGTCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25324139	25324328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25324100_25324300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022370	chr7	-	663	2	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	27807	0	27807	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25330599	25329370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25329859_25330424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022371	chr7	-	491	1	NIC	ENSMUSG00000060376.8	novel	1899	9	NA	NA	28545	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25329861	25329370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_25329400_25329900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022372	chr7	-	524	3	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	27136	1052	27136	-1052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCCCATTGGAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	25331270	25330422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25330597_25330766_25330909_25331062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022373	chr7	-	619	3	ISM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	1	11510	1	-11510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGGAGCAGGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	25358405	25340880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25340969_25341068_25341252_25358057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022374	chr7	+	452	3	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	4	3584	4	-3584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCCTTTCCCAGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25358592	25363873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25358809_25362561_25362676_25363751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022375	chr7	+	366	3	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	3971	2484	3944	-2484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGCAAGAAAAGGTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	25362559	25364973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25362676_25363751_25363874_25364845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022376	chr7	+	354	3	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	5162	1690	5135	-1690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGTGTGGGGGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	25363750	25365767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25363874_25364845_25364987_25365677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022377	chr7	+	527	3	ISM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	6257	37	6230	-37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCCGTGTTGGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	25364845	25367420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25364987_25365677_25365768_25367124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022378	chr7	+	318	1	NIC	ENSMUSG00000061286.8	novel	1680	7	NA	NA	8525	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTGTCTGGAGAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	25367140	25367458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_25367100_25367500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022379	chr7	-	348	2	ISM	ENSMUSG00000061702.11	ENSMUST00000108404.8	485	4	1387	1282	1387	-1282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTGGGCATCGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25373085	25369948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25370061_25372849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022380	chr7	+	544	1	ISM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	5235	0	4857	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGCCTCCTTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	25385439	25385983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25385400_25386000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022381	chr7	+	754	4	ISM	ENSMUSG00000002603.16	ENST00000677934.1	1081	5	2	830	2	-830	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGAGCCTGGACACA	NA	NA	NA	NA	NA	NA	NA	NA	25387295	25403671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25387649_25391801_25391963_25393647_25393766_25403549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022382	chr7	+	728	4	ISM	ENSMUSG00000002603.16	ENST00000677934.1	1081	5	4507	-1	4507	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGTCTCCGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	25391800	25404502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_25391963_25393647_25393766_25403549_25403704_25404208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022383	chr7	-	274	1	ISM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	33103	216	33034	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCACCACCACCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	25421079	25420805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25420800_25421100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022384	chr7	-	1182	4	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	28472	-30	28472	30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAAGAAGCAAATTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	25425641	25421225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25421789_25422230_25422267_25423979_25424270_25425348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022385	chr7	-	415	2	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	31679	322	31679	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTATCCCAGGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25422434	25421577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25421789_25422230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022386	chr7	-	460	2	ISM	ENSMUSG00000040725.14	ENST00000352456.7	3249	15	31438	1424	29887	-966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAAGATGGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25424226	25422230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25422444_25423979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022387	chr7	-	376	2	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	27799	4163	27799	-4154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGAGGAGGCTTCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	25426314	25425418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25425640_25426159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022388	chr7	-	255	2	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	21543	4948	21543	-4939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGAAGGATGTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25432570	25426203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25426329_25432440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022389	chr7	-	242	2	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	21320	11197	21320	3562	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTAGATCAGGTACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	25432793	25432452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25432570_25432668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022390	chr7	-	385	2	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	19870	11411	19870	3348	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGACCTGTGAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	25434243	25432666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25432792_25433983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022391	chr7	-	443	3	ISM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	11660	12767	11660	1992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCACCATTGGGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	25442453	25434022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25434251_25440252_25440366_25442351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022392	chr7	-	294	3	ISM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	9464	4302	9451	-4302	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGCCGCTTTGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	25444662	25440316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25440366_25442351_25442452_25444517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022393	chr7	-	282	3	ISM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	8278	6371	8265	-6371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCCTTGGACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	25445848	25442385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25442452_25444517_25444658_25445772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022394	chr7	-	281	2	ISM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	3711	11732	3698	-11732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTACATGTGACAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	25450415	25447746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25447902_25450289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022395	chr7	-	904	1	Genic_Genomic	ENSMUSG00000002602.17	novel	NA	NA	NA	NA	30512	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCTTGTGTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	25457600	25456696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_25456700_25457600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022396	chr7	-	1279	4	ISM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	25376	448	25358	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTTTTTAATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	25462754	25457502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022397	chr7	+	856	5	FSM	ENSMUSG00000030483.15	ENST00000593831.1	905	5	49	0	49	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCAGTACTCCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	25610704	25625747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_25610826_25610978_25611129_25616358_25616547_25616712_25616855_25625492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022398	chr7	-	2106	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26866226	26858082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022399	chr7	-	1322	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	15	-1	15	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTGTCTGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	26895655	26886430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022400	chr7	+	210	2	ISM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	6091	17397	6091	-17397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATCCAGTTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	26939220	26939550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26939345_26939464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022401	chr7	+	222	2	ISM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	6340	15403	6340	-15403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAGAGGGGTCGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	26939469	26941544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26939551_26941403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022402	chr7	+	225	2	ISM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	8273	15228	8273	-15228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGCCCCCTCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	26941402	26941719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26941545_26941636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022403	chr7	+	277	3	ISM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	8548	7094	8548	-7094	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATCTCCTTGTGGAACG	NA	NA	NA	NA	NA	NA	NA	NA	26941677	26949853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26941719_26942727_26942822_26949711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022404	chr7	+	334	3	ISM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	9610	6877	9610	-6877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTTTATGATATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	26942739	26950070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26942822_26949711_26949854_26949960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022405	chr7	+	276	3	ISM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	16579	5239	16579	-5239	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCGGGCGTTTGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	26949708	26951708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26949854_26949960_26950069_26951685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022406	chr7	+	564	4	ISM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	16828	0	16828	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGGGACCTCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	26949957	26956947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26950069_26951685_26951752_26956036_26956124_26956647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022407	chr7	+	283	1	ISM	ENSMUSG00000003762.14	ENST00000679130.1	1704	15	25197	0	23535	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGGGACCTCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	26956664	26956947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26956700_26956900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022408	chr7	+	702	4	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	7855	4843	7855	-4843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCACAGGTGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	26966150	26976346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26966227_26968203_26968345_26973379_26973570_26976051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022409	chr7	+	1169	4	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	15084	461	15084	-461	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTCGAGGCCCAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	26973379	26980728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26973570_26976051_26976358_26978928_26979052_26980178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022410	chr7	+	663	1	ISM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	22377	377	22231	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCACTTAAGCCTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	26980526	26981189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_26980500_26981200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022411	chr7	-	790	1	ISM	ENSMUSG00000011751.17	ENST00000352632.7	8601	35	85403	0	37334	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	27056597	27055807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27055800_27056600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022412	chr7	-	859	3	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	34468	356	34468	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCCATGCGGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	27059463	27056163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27056876_27059167_27059211_27059359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022413	chr7	-	356	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	80106	5187	32037	-5186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAACCGGTGAGCGCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	27061894	27060999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27061285_27061823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022414	chr7	-	137	2	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	30330	6055	30330	-6049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGGAGAAAGAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	27063601	27061862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27061894_27063495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022415	chr7	-	116	2	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	19105	17766	19105	-17760	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTAAGCTGTGCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	27074826	27073573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27073661_27074797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022416	chr7	-	348	2	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	2952	18989	2952	-18983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCGGGGCATAGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	27090979	27074796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27075023_27090857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022417	chr7	-	346	2	ISM	ENSMUSG00000011751.17	ENSMUST00000108362.8	4861	18	254	35063	254	-35057	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGTTACAGGTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	27093677	27090870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27091122_27093582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022418	chr7	-	882	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	37662	46415	-8360	-46414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCTGCGGCAAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	27104338	27102227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27102364_27103592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022419	chr7	-	168	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	35376	48452	-10646	-48451	internal_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGCCGAGGTGCGCGC	NA	NA	NA	NA	NA	NA	NA	NA	27106624	27104264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27104344_27106535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022420	chr7	-	906	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	33503	50785	-12519	-50784	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAAGGAGGTCATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	27108497	27106597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27106674_27107667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022421	chr7	-	337	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	25673	58282	-20349	-58281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTACAGGGTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	27116327	27114094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27114234_27116129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022422	chr7	-	376	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	24506	60356	-21516	-60355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGTCTACATGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	27117494	27116168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27116433_27117382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022423	chr7	-	138	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	23980	61994	-22042	-61993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGACAAGGTGAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	27118020	27117806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27117914_27117989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022424	chr7	-	141	2	ISM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	8312	76751	8312	-76750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTGGAGAACGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	27133688	27132563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27132647_27133630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022425	chr7	+	574	4	FSM	ENSMUSG00000040466.17	ENST00000595483.5	574	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGGAAGCCTAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	27147548	27165390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27165144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022426	chr7	+	563	4	NNC	ENSMUSG00000040466.17	novel	574	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGGAAGCCTAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	27147549	27165390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_27147612_27158680_27158846_27158987_27159078_27165144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022427	chr7	-	392	1	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	27168640	27168248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr7_-_27168200_27168600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022428	chr7	+	969	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	10	350	10	-350	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACTGTCCTTATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	27173202	27176439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_27173297_27175564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022429	chr7	+	944	1	ISM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	2653	0	2653	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAATTGTAATTAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	27175845	27176789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27175800_27176800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022430	chr7	+	419	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	3	811	3	-624	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCCTGCCGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	27186337	27188930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_27186504_27188677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022431	chr7	+	358	2	FSM	ENSMUSG00000008384.9	ENST00000357949.5	1001	2	7	636	7	-636	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGAACCCGCACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	27186384	27188918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_27186502_27188677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022432	chr7	+	445	1	Genic_Genomic	ENSMUSG00000008384.9	novel	NA	NA	NA	NA	2920	1	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGCTTCTTTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	27189297	27189742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_27189300_27189700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022433	chr7	-	356	1	Genic_Genomic	ENSMUSG00000003363.16	novel	NA	NA	NA	NA	20858	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATGAGATGGTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	27231779	27231423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_27231400_27231800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022434	chr7	-	542	3	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	19419	192	19419	-192	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTCTCCACTATACTCC	NA	NA	NA	NA	NA	NA	NA	NA	27233218	27231616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27231911_27231999_27232100_27233070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022435	chr7	-	509	3	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	15430	1646	15430	-1646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCACCCATCCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	27237207	27233070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27233237_27235213_27235354_27237004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022436	chr7	-	479	3	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	13734	3780	13734	-3780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGGCAGGACTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	27238903	27235204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27235354_27237004_27237206_27238774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022437	chr7	-	301	2	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	11944	7553	11944	-7553	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGCAACAGCAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	27240693	27238977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27239095_27240509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022438	chr7	-	405	3	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	11222	9084	11222	-9084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGAAGCCTCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	27241415	27240508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27240694_27241110_27241254_27241338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022439	chr7	-	354	4	ISM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	10397	9715	10397	-9715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCAGCCCCCTGCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	27242240	27241139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27241254_27241338_27241414_27241513_27241607_27242168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022440	chr7	-	501	4	ISM	ENSMUSG00000003363.16	ENSMUST00000117611.8	2297	14	58	10089	52	-10089	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGGATGGGATGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	27252585	27241513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27241607_27242168_27242330_27248434_27248519_27252422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022441	chr7	+	700	2	ISM	ENSMUSG00000049643.16	ENSMUST00000187032.2	1871	9	18249	1117	18249	-1117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCACTCGGGAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	27278149	27280402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27278209_27279761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022442	chr7	+	689	1	ISM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	28178	0	20935	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	27280835	27281524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27280800_27281500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022443	chr7	+	1308	3	ISM	ENSMUSG00000004056.16	ENSMUST00000085917.5	1392	12	28270	-1017	28270	-261	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGGCCATGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	27336356	27338612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27336436_27336516_27336620_27337486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022444	chr7	+	1177	1	ISM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	46724	1374	29614	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGTCCACATTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	27337700	27338877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27337700_27338900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022445	chr7	+	721	1	ISM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	48554	0	31444	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTTGTACTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	27339530	27340251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27339500_27340300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022446	chr7	+	3966	2	ISM	ENSMUSG00000057093.15	ENSMUST00000076421.7	1947	4	6175	-2203	6175	-214	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAAATCTCTCCTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	27398101	27405695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27398177_27401804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022447	chr7	+	3918	1	ISM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	13227	0	10065	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	27401991	27405909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27402000_27405900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022448	chr7	-	1793	5	ISM	ENSMUSG00000063047.10	ENSMUST00000205874.2	1907	6	2370	0	-1401	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCATCATGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	27676194	27658559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27660056_27671047_27671147_27673143_27673271_27674177_27674231_27676176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022449	chr7	-	688	5	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	7069	-51	7069	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTTAGGTGTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	27742404	27741130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022450	chr7	-	673	5	ISM	ENSMUSG00000030603.17	ENSMUST00000140053.3	1244	11	1067	1087	1067	-1087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCCACCAAGAGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	27748406	27742268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022451	chr7	-	607	5	ISM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	55	5466	2	-5416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGGACGAGGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	27749471	27746597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022452	chr7	+	1046	3	ISM	ENSMUSG00000002409.19	ENSMUST00000172467.8	2523	11	5566	2	5566	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGCCTGAGCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	27885256	27886717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_27885455_27885786_27885894_27885976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022453	chr7	+	1037	3	NNC	ENSMUSG00000002409.19	novel	2534	11	NA	NA	5569	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGCCTGAGCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	27885259	27886717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_27885459_27885796_27885894_27885976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022454	chr7	+	1048	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	703	0	703	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTGGGTTGTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	27977866	27978914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_27977900_27978900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022455	chr7	-	370	3	FSM	ENSMUSG00000046750.19	ENST00000622070.2	364	3	-4	-2	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCAGCATCTCCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	27987625	27984003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_27984189_27987361_27987468_27987546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022456	chr7	-	360	3	NNC	ENSMUSG00000046750.19	novel	364	3	NA	NA	1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCAGCATCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	27987620	27984004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_27984180_27987356_27987468_27987546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022457	chr7	-	362	3	NNC	ENSMUSG00000046750.19	novel	364	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCAGCATCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	27987621	27984004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_27984186_27987361_27987468_27987546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022458	chr7	-	360	3	NNC	ENSMUSG00000046750.19	novel	364	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCAGCATCTCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	27987621	27984004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_27984189_27987366_27987468_27987546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022459	chr7	-	1587	6	FSM	ENSMUSG00000003436.12	ENST00000205143.4	1607	6	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGTGAGGGCGACACA	NA	NA	NA	NA	NA	NA	NA	NA	28000975	27993774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_27994349_27995712_27995936_27997939_27998162_27998317_27998561_27999591_27999650_28000708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022460	chr7	-	1022	7	ISM	ENSMUSG00000003438.18	ENST00000607714.6	1256	10	3634	-93	3634	93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCATATACTCTATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	28007839	28005082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022461	chr7	-	1009	5	ISM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	22261	-4	22062	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28015870	28014318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022462	chr7	-	589	6	ISM	ENSMUSG00000003435.10	ENST00000402194.6	3318	28	19471	1905	19471	-1905	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGAACACCTATGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	28018461	28016453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022463	chr7	+	1118	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	-7	-2	-7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGGCCTTTATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	28050069	28052582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022464	chr7	+	1102	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTGGCCTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	28050076	28052580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_28050277_28050416_28050512_28051601_28051699_28051787_28051836_28051918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022465	chr7	+	1102	5	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTGGCCTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	28050076	28052580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_28050277_28050423_28050519_28051601_28051699_28051787_28051836_28051918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022466	chr7	+	1087	4	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTGGCCTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	28050076	28052580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_28050277_28050416_28050519_28051601_28051725_28051918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022467	chr7	+	1092	4	NNC	ENSMUSG00000037563.16	novel	1109	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTGGCCTTTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	28050079	28052580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_28050277_28050416_28050519_28051601_28051699_28051884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022468	chr7	-	1053	1	FSM	ENSMUSG00000044786.7	ENSMUST00000209061.2	2465	1	1420	-8	581	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAATTTGTCTTTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	28077260	28076207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28076200_28077300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022469	chr7	-	595	2	FSM	ENSMUSG00000044786.7	ENST00000597629.3	1505	2	910	0	910	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAGATGAAATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28076931	28076214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28076623_28076744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022470	chr7	-	1692	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	172	926	172	-919	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATCCGATCCTGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	28079506	28077134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28077919_28078598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022471	chr7	-	407	1	ISM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	6156	0	6140	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAGCTCCAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	28085977	28085570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28085600_28086000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022472	chr7	-	666	4	FSM	ENSMUSG00000003444.9	ENST00000594368.5	674	4	9	-1	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAGACAGCACAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	28092108	28086090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28086380_28090236_28090322_28090514_28090574_28091875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022473	chr7	-	425	3	ISM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	1561	597	1545	-76	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAACAGGTGGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28090572	28086167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28086450_28090236_28090322_28090514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022474	chr7	+	583	4	ISM	ENSMUSG00000003437.15	ENST00000595564.5	1805	13	9	3703	9	-3703	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACCAGCTCTAAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	28092361	28095103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28092680_28094467_28094561_28094842_28094965_28095053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022475	chr7	+	389	5	ISM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	2843	2748	2843	-2741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTATTTTCTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28095218	28096065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022476	chr7	+	418	4	ISM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	3326	880	3326	-873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGTCAAACACCGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	28095701	28097933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28095813_28096034_28096152_28096245_28096375_28097872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022477	chr7	+	388	4	NNC	ENSMUSG00000003437.15	novel	1805	13	NA	NA	3349	-884	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGCTTGTCGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	28095724	28097922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_28095817_28096034_28096152_28096245_28096375_28097872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022478	chr7	+	446	4	ISM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	3656	639	3656	-632	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGGATTAGTCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	28096031	28098174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28096152_28096245_28096375_28097872_28097979_28098083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022479	chr7	+	696	4	ISM	ENSMUSG00000003437.15	ENST00000595564.5	1805	13	3895	0	3872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATCTCCTAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	28096247	28098806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28096375_28097872_28097979_28098083_28098175_28098434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022480	chr7	+	378	1	ISM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	6057	3	6057	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCCTAAAGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28098432	28098810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28098400_28098800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022481	chr7	-	637	3	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	32559	0	32448	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGATCATTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28103168	28100408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28100838_28101248_28101333_28103044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022482	chr7	-	430	1	ISM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	34778	1462	34778	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGATCATTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	28100838	28100408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28100400_28100800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022483	chr7	-	455	4	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	30316	2656	30205	-2656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCATGTTCCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	28105411	28103064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28103169_28103288_28103488_28104913_28105033_28105378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022484	chr7	-	411	2	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	29610	4969	29499	-4969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACCTTTGCTAGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	28106117	28105377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28105465_28105793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022485	chr7	-	518	3	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	28722	5385	28611	-5385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGTAGTGTCTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	28107005	28105793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28106113_28106655_28106743_28106893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022486	chr7	-	753	3	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	22015	6498	21904	-6498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGTCGCAGGTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	28113712	28106906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28107004_28107360_28107601_28113296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022487	chr7	-	833	2	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	12473	12920	12362	-12920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAACAGTATTGGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	28123254	28113328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28113768_28122860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022488	chr7	-	510	2	ISM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	21	22452	21	-22452	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTCTGCCGCTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	28135706	28122860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28123263_28135598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022489	chr7	-	1271	5	ISM	ENSMUSG00000030602.14	ENST00000358301.7	2527	9	5591	0	5581	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGTGTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	28262081	28258249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28258633_28258722_28259231_28259569_28259705_28260223_28260350_28261962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022490	chr7	-	829	8	FSM	ENSMUSG00000037469.12	ENST00000594229.1	870	8	41	0	41	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGCAGGTGGGAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	28316640	28313644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314497_28314561_28315905_28316089_28316477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022491	chr7	+	1559	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28416301	28437569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022492	chr7	+	747	1	ISM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	20594	0	4898	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28436822	28437569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28436800_28437600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022493	chr7	-	440	1	Genic_Genomic	ENSMUSG00000045948.9	novel	NA	NA	NA	NA	1691	1	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTGCGGTGTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28439504	28439064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_28439100_28439500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022494	chr7	-	879	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28441191	28439065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28439665_28440911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022495	chr7	-	1242	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTTCCTGCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	28465938	28458456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022496	chr7	+	885	3	ISM	ENSMUSG00000015149.15	ENSMUST00000170068.9	1585	13	20764	1	20326	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTTGTGTGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	28487004	28488085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28487079_28487186_28487254_28487341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022497	chr7	+	599	4	ISM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	7583	1586	7583	-1569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCTAGCAATGTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	28517897	28520105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28517958_28518068_28518350_28519577_28519700_28519969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022498	chr7	+	518	2	ISM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	10502	-3	10502	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGTTGTCTGCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	28520816	28521694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28520913_28521272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022499	chr7	-	1147	1	Genic_Genomic	ENSMUSG00000054808.16	novel	NA	NA	NA	NA	67876	1	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCATCTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	28593818	28592671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_28592700_28593800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022500	chr7	-	1464	4	ISM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	66149	19	66078	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATATTTTTAAGAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	28595616	28592691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022501	chr7	-	340	4	ISM	ENSMUSG00000053565.11	ENSMUST00000207683.2	647	7	7117	-2	7103	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTCTCTTGCCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	28674095	28670795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022502	chr7	-	500	5	FSM	ENSMUSG00000053565.11	ENST00000588934.5	459	5	-41	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCTATTGTCTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	28681239	28670799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28670864_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022503	chr7	-	454	5	ISM	ENSMUSG00000053565.11	ENST00000592558.1	652	7	3782	0	3782	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCTATTGTCTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	28677416	28670799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28670864_28671956_28672083_28674027_28674095_28676625_28676701_28677294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022504	chr7	-	348	4	ISM	ENSMUSG00000053565.11	ENSMUST00000208616.2	909	7	4589	495	4498	-495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCCTGGGGCCGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	28676700	28671954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28672083_28673573_28673652_28674027_28674095_28676625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022505	chr7	-	429	5	ISM	ENSMUSG00000053565.11	ENST00000592558.1	652	7	1228	1219	1228	-559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGCAGCCAGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	28679970	28672018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28672083_28674027_28674095_28676625_28676701_28677294_28677416_28679868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022506	chr7	-	343	4	ISM	ENSMUSG00000053565.11	ENSMUST00000208616.2	909	7	3872	2114	3781	-2114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCCTGGTGCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	28677417	28673573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28673652_28674027_28674095_28676625_28676701_28677294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022507	chr7	-	399	5	ISM	ENSMUSG00000053565.11	ENST00000592558.1	652	7	37	3254	37	-2594	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTGAAGACTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	28681161	28674053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022508	chr7	-	1363	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	29	-1	29	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGTATCCAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	28879948	28873611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022509	chr7	-	563	1	Genic_Genomic	ENSMUSG00000030591.18	novel	NA	NA	NA	NA	5732	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGTATCCAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	28874174	28873611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_28873600_28874200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022510	chr7	+	388	3	ISM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	1	2890	1	-2890	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGCACCTGCTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	28937812	28943929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28937862_28943494_28943728_28943823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022511	chr7	+	633	5	ISM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	5682	1572	-1	-1572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCTCCTGCCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	28943493	28945247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022512	chr7	+	687	5	ISM	ENSMUSG00000030588.13	ENST00000592246.5	778	6	522	-139	522	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCACTTCTGACCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	28944016	28946958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022513	chr7	+	366	3	ISM	ENSMUSG00000030588.13	ENST00000592246.5	778	6	732	1322	732	-1322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCAAATCTGGGGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	28944226	28945497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28944265_28945090_28945247_28945325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022514	chr7	+	404	3	ISM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	7363	-2	1680	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTGGCCTCCAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	28945174	28946821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28945247_28945325_28945498_28946661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022515	chr7	-	1455	4	FSM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	13	-2	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGCTCTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28947878	28945983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_28947160_28947321_28947391_28947552_28947666_28947781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022516	chr7	+	297	1	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	3163	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	28946657	28946954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_28946700_28947000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022517	chr7	+	511	3	FSM	ENSMUSG00000037166.6	ENST00000301242.9	506	3	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGTGTCCGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	28988753	28992814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_28988961_28990934_28991020_28992595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022518	chr7	+	460	3	NIC	ENSMUSG00000037166.6	novel	506	3	NA	NA	42	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGGTGTCCGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	28988799	28992813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_28988961_28990934_28991016_28992595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022519	chr7	+	321	3	NNC	ENSMUSG00000037166.6	novel	506	3	NA	NA	123	-55	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTCCACCCCCAAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	28988880	28992758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_28988961_28990941_28991020_28992595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022520	chr7	+	215	3	FSM	ENSMUSG00000037166.6	ENST00000591291.5	391	3	177	-1	177	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGTGTCCGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	28988934	28992814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_28988961_28990934_28991016_28992706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022521	chr7	+	316	2	ISM	ENSMUSG00000037166.6	ENST00000301242.9	506	3	2164	0	2164	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGGTGTCCGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	28990921	28992813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_28991020_28992595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022522	chr7	+	638	1	Genic_Genomic	ENSMUSG00000037166.6	novel	NA	NA	NA	NA	3834	3	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACAATGGGTTTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	28992591	28993229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_28992600_28993200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022523	chr7	+	606	3	ISM	ENSMUSG00000030584.15	ENST00000414789.5	1735	12	6611	-10	6611	3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATATATACAAAGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	29015063	29016331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_29015162_29015668_29015751_29015905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022524	chr7	-	2192	4	ISM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	104309	66903	-33333	-65159	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTCAGAGGAGGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	29100576	29086705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29086753_29087387_29087577_29096575_29096707_29098751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022525	chr7	+	263	1	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAAAGAAAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	29316915	29317178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr7_+_29316900_29317200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022526	chr7	+	1522	1	Genic_Genomic	ENSMUSG00000047473.15	novel	NA	NA	NA	NA	9098	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATGTTAAACATGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	29492606	29494128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_29492600_29494100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022527	chr7	+	2621	1	ISM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	12206	65	12201	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACACTTTTCACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	29527744	29530365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_29527700_29530400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022528	chr7	+	2192	1	NIC	ENSMUSG00000099689.7	novel	2614	5	NA	NA	6099	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGTTTCATAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	29614040	29616232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_29614000_29616200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022529	chr7	-	527	1	FSM	ENSMUSG00000083669.6	ENSMUST00000121822.2	348	1	-28	-151	-28	151	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTGGACATAACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	29665018	29664491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_29664500_29665000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022530	chr7	-	1911	1	Genic_Genomic	ENSMUSG00000053985.11	novel	NA	NA	NA	NA	6467	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCCCAGATTGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	29737692	29735781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_29735800_29737700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022531	chr7	-	1570	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	142	-3	142	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGGCAGTGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	29789810	29776758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022532	chr7	-	1283	1	NIC	ENSMUSG00000078768.3	novel	1709	4	NA	NA	11908	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTGTGTGGCAGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	29778044	29776761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_29776800_29778000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022533	chr7	+	942	2	ISM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	4771	2609	4380	-2601	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTTCCCATGACAACCACC	NA	NA	NA	NA	NA	NA	NA	NA	29798989	29804438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_29799148_29803654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022534	chr7	+	896	1	ISM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	11933	0	11542	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTTGTTTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29806151	29807047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_29806200_29807000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022535	chr7	+	881	3	ISM	ENSMUSG00000074220.11	ENST00000292928.7	1728	4	4944	734	4944	-734	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAGCACGAGCGGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	29830147	29833370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_29830253_29830956_29831050_29832687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022536	chr7	+	1245	1	ISM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	11764	0	7927	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGAAAATGAAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	29833130	29834375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_29833100_29834400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022537	chr7	-	465	1	ISM	ENSMUSG00000001794.14	ENSMUST00000001845.13	1600	12	11405	0	5700	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	29886831	29886366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29886400_29886800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022538	chr7	-	725	5	ISM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	1001	0	-33	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAGTCTCTTGATTCC	NA	NA	NA	NA	NA	NA	NA	NA	29930696	29923555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022539	chr7	-	121	1	NIC	ENSMUSG00000006095.13	novel	1416	6	NA	NA	6887	1	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTGGAAGGAGGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	29923776	29923655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_29923700_29923800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022540	chr7	-	144	2	ISM	ENSMUSG00000006095.13	ENST00000586868.1	302	3	6681	57	6681	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGTCACCGTAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	29923982	29923713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29923773_29923897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022541	chr7	-	235	3	FSM	ENSMUSG00000006095.13	ENST00000586868.1	302	3	0	67	0	-67	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCCATCAGCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	29930663	29923723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_29923773_29923897_29923971_29930550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022542	chr7	-	1099	4	ISM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	0	2740	0	-2639	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCAGGGGCACTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	29931697	29926295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29926461_29927028_29927126_29930550_29930695_29931004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022543	chr7	-	143	1	ISM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	40126	13	40040	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTGGAACCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	29939718	29939575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29939600_29939700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022544	chr7	-	269	2	ISM	ENSMUSG00000037020.17	ENST00000680564.1	4418	29	38964	434	38964	-434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCATGGTGAGCCAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	29940794	29940009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29940140_29940655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022545	chr7	-	171	2	ISM	ENSMUSG00000037020.17	ENST00000680564.1	4418	29	37827	2072	37827	-2072	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCCAAGGGGGCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	29941931	29941647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29941700_29941812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022546	chr7	-	189	2	ISM	ENSMUSG00000037020.17	ENST00000680564.1	4418	29	36374	3322	36374	-3322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTCTTCCGTCAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	29943384	29942897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29942960_29943257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022547	chr7	-	180	2	ISM	ENSMUSG00000037020.17	ENST00000680564.1	4418	29	34894	3783	34894	-3783	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACCCCTCCTACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	29944864	29943358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29943386_29944711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022548	chr7	-	260	2	ISM	ENSMUSG00000037020.17	ENST00000680564.1	4418	29	29530	9628	29530	-9628	internal_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGGGAAGGGGACCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	29950228	29949203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29949338_29950102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022549	chr7	-	174	2	ISM	ENSMUSG00000037020.17	ENST00000680564.1	4418	29	27940	11398	27940	-11398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGGCCATTCGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	29951818	29950973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29951070_29951740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022550	chr7	-	185	2	NNC	ENSMUSG00000037020.17	novel	4418	29	NA	NA	18918	6987	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGCTGTGCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	29960840	29957519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_29957573_29960708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022551	chr7	-	207	2	ISM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	10110	2729	10110	-2729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACGTGGCCCACGGACT	NA	NA	NA	NA	NA	NA	NA	NA	29969648	29967235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29967368_29969573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022552	chr7	-	172	2	ISM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	9611	5122	9611	-5122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTCTGCCAGTTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	29970147	29969628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29969757_29970103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022553	chr7	-	177	2	ISM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	8643	5642	8643	-5642	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCATGTGAGGTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	29971115	29970148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29970242_29971031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022554	chr7	-	198	2	ISM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	41	10051	41	-10051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCACAGGCCATGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	29979717	29974557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_29974619_29979580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022555	chr7	+	458	5	ISM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	4	1933	4	-1819	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAGGGCATCATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	30008145	30011796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022556	chr7	+	702	6	FSM	ENSMUSG00000042831.14	ENST00000485128.5	703	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGACCTTGGAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	30008915	30013615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012053_30012133_30013343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022557	chr7	+	803	6	NNC	ENSMUSG00000042831.14	novel	703	6	NA	NA	6	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTGGATTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30008920	30013730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_30008976_30009410_30009480_30011264_30011326_30011661_30011814_30012053_30012133_30013343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022558	chr7	+	647	3	ISM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	3518	10	2745	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCTTTACTCGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	30011659	30013719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_30011814_30012015_30012133_30013343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022559	chr7	+	391	1	Genic_Genomic	ENSMUSG00000042831.14	novel	NA	NA	NA	NA	4425	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTGGATTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30013339	30013730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_30013300_30013700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022560	chr7	-	2178	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	312	0	312	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTGATTCTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	30023008	30020830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_30020800_30023000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022561	chr7	-	1132	1	ISM	ENSMUSG00000036882.8	ENSMUST00000044338.5	4280	21	10810	13	10810	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGAAATTTGGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30222795	30221663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30221700_30222800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022562	chr7	+	1087	3	FSM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	4	272	4	-272	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTTCCAATTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	30252696	30254596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_30252958_30253686_30253810_30253893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022563	chr7	+	730	1	ISM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	1446	0	1446	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTATGTCTGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	30254138	30254868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_30254100_30254900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022564	chr7	-	667	3	FSM	ENSMUSG00000036835.8	ENSMUST00000207747.2	669	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTTCTTGGGATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	30262510	30261287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_30261560_30261748_30261854_30262220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022565	chr7	-	695	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	14	-1	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGTTCTTGGGATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30262652	30261288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022566	chr7	-	374	1	NIC	ENSMUSG00000036835.8	novel	669	3	NA	NA	575	5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGATCTGTTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30261781	30261407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_30261400_30261800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022567	chr7	-	463	2	FSM	ENSMUSG00000036835.8	ENST00000591949.1	585	2	0	122	0	-122	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCTGGGTGATCATTC	NA	NA	NA	NA	NA	NA	NA	NA	30262364	30261534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_30261854_30262220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022568	chr7	+	576	4	ISM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	877	-4	871	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTTTCCTTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	30263651	30264790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_30263727_30263898_30264033_30264127_30264224_30264519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022569	chr7	-	305	1	Genic_Genomic	ENSMUSG00000036751.8	novel	NA	NA	NA	NA	8951	2	mono-exon	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTATTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	30316588	30316283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_30316300_30316600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022570	chr7	-	378	3	ISM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	1532	145	1495	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAACTACTAATAAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	30324044	30316430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30316588_30322839_30322941_30323924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022571	chr7	-	155	2	NNC	ENSMUSG00000036751.8	novel	354	3	NA	NA	2673	-54	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGGACCCTGAATCATG	NA	NA	NA	NA	NA	NA	NA	NA	30322866	30316452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_30316581_30322839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022572	chr7	-	159	2	NNC	ENSMUSG00000036751.8	novel	354	3	NA	NA	2598	-129	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCCACCTCTCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	30322941	30316527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_30316581_30322835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022573	chr7	+	177	2	Antisense	novelGene_ENSMUSG00000036751.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTTTAGTCTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	30322837	30324000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_30322943_30323928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022574	chr7	-	263	3	ISM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	-2	6609	-2	-6496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTGTGAGTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	30325578	30322894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30322941_30323924_30324039_30325475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022575	chr7	-	1059	6	FSM	ENSMUSG00000006311.9	ENST00000479824.5	1067	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGGGCATCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	30335658	30333095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_30333260_30333413_30333527_30334037_30334515_30334732_30334793_30334976_30335090_30335526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022576	chr7	-	869	4	ISM	ENSMUSG00000036733.17	ENST00000592202.5	1315	8	4911	-62	4911	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACTGGACTTAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	30344584	30340423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022577	chr7	-	225	1	NIC	ENSMUSG00000036733.17	novel	1526	9	NA	NA	8847	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACTGGACTTAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	30340648	30340423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_30340400_30340600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022578	chr7	-	313	3	ISM	ENSMUSG00000036733.17	ENST00000586618.5	648	5	2249	72	2249	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCTAGCTCCTTTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	30347246	30340498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30340646_30340732_30340836_30347183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022579	chr7	-	400	4	ISM	ENSMUSG00000036733.17	ENST00000586618.5	648	5	1	334	1	-275	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCGCGCCATGCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30349494	30340760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30340836_30347183_30347241_30349008_30349145_30349362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022580	chr7	-	581	3	ISM	ENSMUSG00000036733.17	ENST00000589559.5	1195	8	4245	3467	4245	-3467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCCAGCCTGCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	30345250	30343952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30344042_30344250_30344584_30345091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022581	chr7	-	660	4	ISM	ENSMUSG00000036733.17	ENST00000592202.5	1315	8	389	3776	389	-3776	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCTAGAGGTAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30349106	30344261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30344584_30345091_30345247_30347155_30347241_30349008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022582	chr7	-	279	3	ISM	ENSMUSG00000036733.17	ENST00000589559.5	1195	8	2433	4052	2433	-4052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGAAGGACAAGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	30347062	30344537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30344584_30345091_30345247_30346984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022583	chr7	-	778	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	92	0	-22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGTTATGTCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	30428873	30427129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022584	chr7	+	697	4	FSM	ENSMUSG00000046056.16	ENSMUST00000182229.8	732	4	35	0	-27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGGCTCACTGTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30450930	30455559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_30451341_30454233_30454306_30454426_30454472_30455389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022585	chr7	-	998	4	ISM	ENSMUSG00000036634.16	ENST00000392213.8	2300	10	10937	0	10937	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTCTAGACCCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	30601355	30598604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30599124_30600062_30600163_30600487_30600585_30601073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022586	chr7	-	696	3	ISM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	3699	7729	3699	2110	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGTGGAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	30608593	30606346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30606592_30607789_30608048_30608400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022587	chr7	-	688	3	ISM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	934	9804	934	35	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCAGTTTGGACGTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	30611358	30608421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30608698_30610825_30611195_30611315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022588	chr7	-	243	1	NIC	ENSMUSG00000036634.16	novel	2434	13	NA	NA	3594	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCCAACACCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	30608698	30608455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_30608500_30608700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022589	chr7	-	477	4	FSM	ENSMUSG00000036634.16	ENST00000597035.5	482	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTCCCCAACACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	30612287	30608456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_30608698_30611064_30611195_30611315_30611383_30612248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022590	chr7	-	743	4	ISM	ENSMUSG00000001249.15	ENSMUST00000039435.15	1743	13	11087	19	11087	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTTTTGATTAATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	30799335	30798168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022591	chr7	-	279	1	ISM	ENSMUSG00000019194.16	ENSMUST00000211945.2	1501	5	9707	335	8082	0	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGAGGCGAGGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30816562	30816283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30816300_30816600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022592	chr7	-	517	4	ISM	ENSMUSG00000019194.16	ENST00000595652.5	685	5	2280	9	2280	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGGGGCGGTGAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	30822364	30816292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30816562_30816648_30816721_30817130_30817273_30822330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022593	chr7	-	364	3	NNC	ENSMUSG00000019194.16	novel	1501	5	NA	NA	5	-383	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTGAATAGCGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	30824639	30816666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_30816721_30817130_30817273_30824471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022594	chr7	-	370	3	NNC	ENSMUSG00000019194.16	novel	1501	5	NA	NA	15	-385	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGGCTGAATAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30824629	30816668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_30816721_30817130_30817266_30824446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022595	chr7	-	349	4	ISM	ENSMUSG00000019194.16	ENST00000595652.5	685	5	7	416	7	-416	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCGAGAGCAAAGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	30824637	30816699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_30816721_30817130_30817273_30822330_30822359_30824479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022596	chr7	-	340	2	NNC	ENSMUSG00000019194.16	novel	685	5	NA	NA	0	-847	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGGCTGGTAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	30824644	30817130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_30817273_30824446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022597	chr7	-	261	3	NNC	ENSMUSG00000019194.16	novel	1501	5	NA	NA	40	-878	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTACGGAGGCTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	30824604	30817161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_30817273_30822330_30822356_30824479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022598	chr7	-	547	3	FSM	ENSMUSG00000019194.16	ENST00000640135.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCGGGACGTCACCACG	NA	NA	NA	NA	NA	NA	NA	NA	30824649	30820741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_30820814_30822266_30822572_30824479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022599	chr7	-	1279	5	NNC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	20297	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCCCTAGTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	33847100	33840112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022600	chr7	-	685	1	ISM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	44357	0	44148	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAACTATTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	34044755	34044070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34044100_34044800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022601	chr7	-	263	2	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	37954	0	37954	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTACAAACAAGTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	34050949	34045359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34045384_34050710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022602	chr7	-	406	2	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	35915	5351	35915	-5351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATAGCTGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34052988	34050710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34050943_34052814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022603	chr7	-	358	2	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	35628	7455	35628	-7455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGGTTCTGTAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	34053275	34052814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34052987_34053089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022604	chr7	-	362	3	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	31597	7730	31597	-7730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTTTATTTTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	34057306	34053089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34053273_34056858_34056922_34057190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022605	chr7	-	376	3	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	18348	11831	18348	-11831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAACTGAGCTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34070555	34057190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34057368_34065039_34065163_34070479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022606	chr7	-	421	3	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	14084	19678	14084	-19678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGCACTGCCCATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	34074819	34065037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34065163_34070479_34070610_34074653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022607	chr7	-	413	3	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	2	25120	2	-25120	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGGTGATATTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34088901	34070479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34070610_34074653_34074818_34088782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022608	chr7	-	1263	1	Genic_Genomic	ENSMUSG00000030499.10	novel	NA	NA	NA	NA	12409	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCCGTCCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	34339700	34338437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_34338400_34339700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022609	chr7	-	1514	2	ISM	ENSMUSG00000030499.10	ENSMUST00000108070.9	2409	6	10793	158	10640	-154	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGGGTGCCCTGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	34341469	34338597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34339875_34341232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022610	chr7	-	612	3	ISM	ENSMUSG00000030499.10	ENST00000588881.5	940	6	2570	0	2570	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCCCTGGGCTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	34349539	34341230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34341539_34344262_34344408_34349380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022611	chr7	-	960	1	ISM	ENSMUSG00000060402.9	ENSMUST00000238947.2	2699	4	78095	290	78095	1	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTACTCCAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	34375142	34374182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34374200_34375100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022612	chr7	-	1127	3	ISM	ENSMUSG00000060402.9	ENST00000262622.4	2429	4	5549	620	5549	-619	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGATGCCAACTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34447688	34374803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34375691_34376059_34376098_34447486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022613	chr7	-	603	2	NNC	ENSMUSG00000060402.9	novel	2079	3	NA	NA	5583	-1105	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGTACTGTACTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	34447654	34375289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_34375725_34447486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022614	chr7	-	607	3	ISM	ENSMUSG00000060402.9	ENST00000434302.5	2176	5	27	73300	27	-73300	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCGAGGTTGCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	34512082	34447484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34447703_34473250_34473328_34511770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022615	chr7	+	369	3	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	20	120199	20	-119922	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGAGTGGTCCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34611823	34623934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_34611880_34620753_34620938_34623805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022616	chr7	+	377	3	ISM	ENSMUSG00000063931.15	ENST00000397032.8	1392	12	-14	109686	-14	-109686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTAGCTGACTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34620752	34634170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_34620938_34623805_34623934_34634106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022617	chr7	+	392	3	ISM	ENSMUSG00000063931.15	ENST00000397032.8	1392	12	100372	3575	100372	-3575	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTGCATGGTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	34721138	34740281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_34721196_34730767_34730917_34740095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022618	chr7	+	530	3	ISM	ENSMUSG00000063931.15	ENST00000397032.8	1392	12	110000	547	110000	-547	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCTGGGAGCCCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	34730766	34743309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_34730917_34740095_34740281_34743114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022619	chr7	+	633	3	ISM	ENSMUSG00000063931.15	ENST00000397032.8	1392	12	119416	-142	119416	-135	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGTGCTGATTGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	34740182	34743998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_34740281_34743114_34743307_34743655
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022620	chr7	+	365	1	Genic_Genomic	ENSMUSG00000063931.15	novel	NA	NA	NA	NA	123004	2	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCCCATCTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34743770	34744135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_34743800_34744100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022621	chr7	+	1287	1	FSM	ENSMUSG00000034957.11	ENSMUST00000042985.11	2626	1	1339	0	1339	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTGTCTTTTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	34820066	34821353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_34820100_34821400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022622	chr7	-	237	1	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	41668	0	41668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTTGATTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34976197	34975960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34976000_34976200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022623	chr7	-	237	2	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	34782	4796	34782	-4796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCTCAGGGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	34983083	34980756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34980906_34982995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022624	chr7	-	253	2	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	31157	8196	31157	-8196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTTCTGCCCCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	34986708	34984156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34984249_34986547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022625	chr7	-	266	2	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	29756	10703	29756	-10703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCATCTTCGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	34988109	34986663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34986762_34987941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022626	chr7	-	245	2	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	26608	12503	26608	-12503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAGAACCTGTTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	34991257	34988463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34988602_34991150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022627	chr7	-	253	2	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	23053	17178	23053	-17178	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCACGCCAAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34994812	34993138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_34993259_34994679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022628	chr7	-	214	2	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	15146	25042	15146	-25042	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTCTTGGCAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	35002719	35001002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_35001151_35002653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022629	chr7	-	245	2	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	10098	30670	10098	-30670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCCGACAGAAACCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	35007767	35006630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_35006712_35007603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022630	chr7	-	347	1	ISM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	4338	0	4210	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATCCACAGGCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	35091923	35091576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_35091600_35091900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022631	chr7	-	584	3	ISM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	1363	74	1363	-74	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTCCCCTGTCAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	35094770	35092194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_35092517_35094399_35094553_35094661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022632	chr7	-	372	2	ISM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	263	2542	263	-2542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTACCGAGGTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	35095870	35094662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_35094802_35095637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022633	chr7	-	2297	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTTATTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	35255728	35246609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_35247549_35250878_35251087_35254578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022634	chr7	-	605	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	83	-4	83	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATCTGCATTTTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	35346863	35341402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022635	chr7	+	306	2	ISM	ENSMUSG00000044997.4	ENSMUST00000187873.2	696	3	9913	-36	9913	36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTGTCTCCTCACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	35511929	35537535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_35512013_35537312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022636	chr7	-	4666	4	FSM	ENSMUSG00000043456.18	ENST00000355537.4	4810	4	49	95	49	-95	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCATTTATGAATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	37269369	37171652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_37172466_37178705_37180275_37193110_37193264_37267238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022637	chr7	-	827	1	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	58724	0	35904	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	37660243	37659416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_37659400_37660200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022638	chr7	-	1054	2	ISM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	56831	898	34011	54	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGTGTATAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	37662136	37660314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_37661123_37661890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022639	chr7	-	659	1	Genic_Genomic	ENSMUSG00000002068.17	novel	NA	NA	NA	NA	2065	4	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTTAACTCTGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	37798063	37797404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_37797400_37798100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022640	chr7	-	985	4	ISM	ENSMUSG00000002068.17	ENST00000357943.9	1168	5	854	-1	854	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37799274	37797408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_37798063_37798416_37798575_37798671_37798784_37799213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022641	chr7	+	681	2	Antisense	novelGene_ENSMUSG00000002068.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTAAAGAAGTCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	37797536	37798577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_37798060_37798419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022642	chr7	-	791	3	NNC	ENSMUSG00000002068.17	novel	1168	5	NA	NA	1343	-138	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGATGCAGAGCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	37798785	37797547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_37798063_37798412_37798575_37798671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022643	chr7	-	687	4	NNC	ENSMUSG00000002068.17	novel	1168	5	NA	NA	837	-318	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAACACCACTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	37799291	37797727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37799209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022644	chr7	+	306	1	ISM	ENSMUSG00000054676.18	ENSMUST00000178207.10	3340	3	14045	0	10991	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCTCTGTGTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	37896686	37896992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_37896700_37897000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022645	chr7	-	3318	1	Genic_Genomic	ENSMUSG00000074170.6	novel	NA	NA	NA	NA	7737	10	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGAAAGTCGCTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	37919703	37916385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_37916400_37919700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022646	chr7	-	3327	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	28	1908	28	-1908	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAAGCCCATCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	37927412	37918303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_37921583_37927364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022647	chr7	-	278	1	ISM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	9150	0	9150	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCCAGCCTCCAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	37961697	37961419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_37961400_37961700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022648	chr7	-	1128	2	FSM	ENSMUSG00000100431.3	ENSMUST00000211456.2	1180	2	52	0	52	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGCCTTCTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	39447099	39440390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_39441375_39446955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022649	chr7	+	374	1	FSM	ENSMUSG00000056836.9	ENSMUST00000154478.3	395	1	51	-30	51	30	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTATAGTGCTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	39840411	39840785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_39840400_39840800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022650	chr7	-	2038	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	50	-17	-17	17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGCGCTGTGGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	41042753	41023196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022651	chr7	-	1952	1	Genic_Genomic	ENSMUSG00000074166.8	novel	NA	NA	NA	NA	19068	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTTTTTCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41130246	41128294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_41128300_41130200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022652	chr7	+	1963	1	ISM	ENSMUSG00000074165.11	ENSMUST00000100275.10	3177	6	15385	0	1332	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATGTGGTGAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	41298339	41300302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_41298300_41300300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022653	chr7	-	118	1	FSM	ENSMUSG00000091004.3	ENSMUST00000165001.3	700	1	528	54	528	-54	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGCTGATGTCCGATCG	NA	NA	NA	NA	NA	NA	NA	NA	41318203	41318085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_41318100_41318200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022654	chr7	+	211	1	ISM	ENSMUSG00000030468.13	ENSMUST00000005592.7	2569	12	9944	0	9944	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGCTCCTGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	43067571	43067782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43067600_43067800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022655	chr7	+	502	4	ISM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	3	3218	3	-3218	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGGGGTAAGGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	43093509	43104006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022656	chr7	+	542	4	ISM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	8256	1163	8256	-1163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGGTGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	43101762	43106061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43101924_43102222_43102382_43103941_43104005_43105902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022657	chr7	+	544	4	NNC	ENSMUSG00000004610.5	novel	893	6	NA	NA	8258	-1163	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGGTGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	43101764	43106061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_43101924_43102222_43102386_43103941_43104005_43105902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022658	chr7	+	605	4	ISM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	8727	-4	8727	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATGTCCTTGTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	43102233	43107228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43102382_43103941_43104005_43105902_43106062_43106993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022659	chr7	+	232	1	FSM	ENSMUSG00000099210.3	ENSMUST00000184167.3	73	1	72	-231	72	231	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGATGTCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43106992	43107224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_43107000_43107200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022660	chr7	+	1042	3	FSM	ENSMUSG00000038888.9	ENST00000421832.3	1043	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCAAGTTGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43321447	43326307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_43321504_43324541_43325071_43325850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022661	chr7	+	951	2	NNC	ENSMUSG00000038888.9	novel	1043	3	NA	NA	3123	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCAAGTTGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43324569	43326307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_43325064_43325850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022662	chr7	+	302	1	ISM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	5981	0	5974	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTTGGTCTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	43327420	43327722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43327400_43327700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022663	chr7	+	637	3	ISM	ENSMUSG00000064023.5	ENST00000391806.6	926	5	-1	4442	-1	-4442	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGAGCTGGGCCCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	43447481	43448752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43447597_43447949_43448208_43448488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022664	chr7	+	813	4	ISM	ENSMUSG00000064023.5	ENST00000391806.6	926	5	466	0	466	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTGTGTGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	43447948	43453194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43448208_43448488_43448752_43451503_43451638_43453037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022665	chr7	+	1628	2	ISM	ENSMUSG00000045411.17	ENSMUST00000107948.8	2908	6	3516	107	342	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGCCCCTGGCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	43899730	43901630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43899765_43900036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022666	chr7	+	1625	1	ISM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	3973	0	730	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	NA	NA	NA	NA	NA	NA	NA	43900118	43901743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_43900100_43901700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022667	chr7	-	338	1	ISM	ENSMUSG00000004473.11	ENSMUST00000004587.11	2978	4	2029	1849	1892	5	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTCTCTGCCCAGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	43954297	43953959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_43954000_43954300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022668	chr7	-	666	3	ISM	ENSMUSG00000004473.11	ENST00000599973.1	1045	4	288	235	288	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGAGGGGCTCTACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	43955901	43954199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_43954469_43955252_43955445_43955696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022669	chr7	-	437	3	ISM	ENSMUSG00000004473.11	ENST00000599973.1	1045	4	1	1391	1	-1391	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGCGGCAGCTGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	43956188	43955355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_43955445_43955696_43955899_43956042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022670	chr7	+	523	4	ISM	ENSMUSG00000038695.14	ENSMUST00000035844.11	930	5	157	357	43	-241	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGAGTCAGGTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44117560	44120719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44117615_44118233_44118394_44119835_44119962_44120536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022671	chr7	+	667	4	ISM	ENSMUSG00000038695.14	ENSMUST00000118628.8	864	5	817	-4	768	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCCTGGGCTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	44118285	44121076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44118394_44119835_44119962_44120536_44120732_44120838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022672	chr7	-	218	1	ISM	ENSMUSG00000008140.19	ENSMUST00000118808.9	1872	7	6375	0	6252	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTCTTGGTTCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	44139578	44139360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44139400_44139600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022673	chr7	-	299	2	ISM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	4463	830	4356	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCCTTCCTGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44141474	44140191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44140395_44141378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022674	chr7	-	277	2	ISM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	4080	1844	4080	-1844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGGCTCCTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	44141750	44141378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44141473_44141567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022675	chr7	-	398	3	ISM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	3106	2033	3106	-2033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCTGGAGGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	44142724	44141567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44141750_44141977_44142083_44142613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022676	chr7	-	185	2	ISM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	1525	3078	1525	-3078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCCCCAGTGAGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	44144305	44142612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44142724_44144231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022677	chr7	-	276	2	ISM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	-48	4693	-48	-4693	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTGTCTTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	44145878	44144227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44144305_44145679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022678	chr7	+	274	3	ISM	ENSMUSG00000051113.10	ENST00000595790.5	473	4	1	2714	1	492	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCTAAGTCCCAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	44145671	44147064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44145707_44146356_44146458_44146926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022679	chr7	+	238	1	NIC	ENSMUSG00000051113.10	novel	473	4	NA	NA	253	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGTCTCAGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	44146334	44146572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_44146300_44146600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022680	chr7	+	393	3	ISM	ENSMUSG00000051113.10	ENST00000595790.5	473	4	730	0	319	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGCGCCTGAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	44146400	44149778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44146458_44146926_44147058_44149573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022681	chr7	+	217	1	NIC	ENSMUSG00000051113.10	novel	862	5	NA	NA	3484	4	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGCCTGAGGAAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44149565	44149782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_44149600_44149800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022682	chr7	+	325	2	ISM	ENSMUSG00000051113.10	ENSMUST00000107927.5	862	5	3620	86	3543	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGAAATCAAGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44149624	44150478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44149863_44150391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022683	chr7	-	515	3	FSM	ENSMUSG00000008193.14	ENST00000439922.6	505	3	0	-10	0	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGAGCACTCCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	44179354	44177391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_44177682_44178260_44178412_44179280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022684	chr7	-	288	1	NIC	ENSMUSG00000008193.14	novel	2788	6	NA	NA	1668	3	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGGCATGTCTGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	44177686	44177398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_44177400_44177700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022685	chr7	+	429	2	Antisense	novelGene_ENSMUSG00000008193.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGGGAGACCAGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	44177400	44178410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_44177689_44178269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022686	chr7	-	513	4	FSM	ENSMUSG00000008193.14	ENST00000597855.5	507	4	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGCGTCTTCCAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44179355	44177589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_44177682_44178260_44178377_44178802_44179033_44179280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022687	chr7	-	152	1	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	10540	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44182321	44182169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_44182200_44182300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022688	chr7	-	160	2	ISM	ENSMUSG00000038644.15	ENST00000440232.7	3315	26	8951	1174	8951	-1174	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCTGGCCAAGCCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	44183910	44183383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44183442_44183808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022689	chr7	-	160	2	ISM	ENSMUSG00000038644.15	ENST00000440232.7	3315	26	8759	1657	8759	-1657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCCTATGTGATCATTG	NA	NA	NA	NA	NA	NA	NA	NA	44184102	44183866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44183912_44183987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022690	chr7	-	398	3	ISM	ENSMUSG00000038644.15	ENST00000440232.7	3315	26	7644	1804	7644	-1804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCACGTGGAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	44185217	44184013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44184141_44184440_44184617_44185122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022691	chr7	-	344	3	ISM	ENSMUSG00000038644.15	ENST00000440232.7	3315	26	2425	6647	2425	-6647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCAGGTCGGCCGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	44190436	44188856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44188927_44189948_44190054_44190267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022692	chr7	-	164	2	ISM	ENSMUSG00000038644.15	ENST00000440232.7	3315	26	1915	8488	1915	-8488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCCGGGAGCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	44190946	44190697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44190829_44190913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022693	chr7	-	827	3	ISM	ENSMUSG00000060601.14	ENSMUST00000107912.8	1839	9	2840	0	2840	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44200270	44199039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44199556_44199723_44199933_44200168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022694	chr7	-	837	4	ISM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	1302	1683	1065	-1666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACTAGGCTCTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44202045	44200741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44200922_44201023_44201284_44201378_44201661_44201930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022695	chr7	+	152	2	ISM	ENSMUSG00000002205.17	ENST00000601912.5	980	9	69	9848	69	-9848	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCACCTCACTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44403306	44409202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44403380_44409123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022696	chr7	+	160	2	ISM	ENSMUSG00000002205.17	ENST00000601912.5	980	9	5987	8683	5987	-8683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGTCCAGGAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44409224	44410367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44409319_44410301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022697	chr7	+	210	3	ISM	ENSMUSG00000002205.17	ENST00000601912.5	980	9	7062	5426	7062	-5426	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTACAGGTGAGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44410299	44413624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44410367_44412414_44412482_44413548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022698	chr7	+	112	2	ISM	ENSMUSG00000002205.17	ENST00000601912.5	980	9	10361	4767	10361	-4767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGCTTCAGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	44413598	44414283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44413634_44414206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022699	chr7	+	136	2	ISM	ENSMUSG00000002205.17	ENST00000601912.5	980	9	10995	2449	10995	-2449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAATGTCTTTGTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	44414232	44416601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44414313_44416545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022700	chr7	+	557	4	ISM	ENSMUSG00000002205.17	ENST00000316763.8	1366	11	13307	0	13307	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGAGGTTGTTCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	44416544	44424959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44416639_44417866_44418000_44418956_44419127_44424799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022701	chr7	+	95	1	NIC	ENSMUSG00000002205.17	novel	1969	15	NA	NA	15718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAAGATAACTAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44418955	44419050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_44419000_44419000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022702	chr7	+	1169	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	0	1553	0	-882	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCAGTGCTACAGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	44465511	44478683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_44465908_44477910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022703	chr7	+	1328	2	FSM	ENSMUSG00000109511.2	ENSMUST00000208626.2	2708	2	62	1318	62	-650	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTAGCAGCTACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	44465573	44478915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_44465897_44477910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022704	chr7	+	1655	2	FSM	ENSMUSG00000109511.2	ENST00000352066.8	1868	2	2	211	2	-211	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATCATCGAGCACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	44465770	44479354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_44465908_44477836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022705	chr7	+	2217	1	ISM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	12508	0	12213	0	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTGAGTATGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	44478019	44480236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44478000_44480200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022706	chr7	-	1647	1	Genic_Genomic	ENSMUSG00000038520.16	novel	NA	NA	NA	NA	12620	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGTTAGTGCCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	44485690	44484043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_44484000_44485700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022707	chr7	+	689	3	ISM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	-97	1564	-97	-879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGATCCTGGGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	44498550	44503281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44498773_44501994_44502384_44503203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022708	chr7	+	715	3	ISM	ENSMUSG00000011096.18	ENSMUST00000107880.9	1757	5	42	1564	42	-879	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGATCCTGGGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	44499472	44503281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44499721_44501994_44502384_44503203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022709	chr7	+	637	3	ISM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	2942	628	2564	-628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGGGGGGAACGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	44501994	44503532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44502384_44503203_44503282_44503362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022710	chr7	+	896	3	ISM	ENSMUSG00000011096.18	ENSMUST00000107880.9	1757	5	3771	184	3771	-171	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAGGACAGTACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44503201	44504661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44503282_44503362_44503533_44504015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022711	chr7	+	731	1	Genic_Genomic	ENSMUSG00000011096.18	novel	NA	NA	NA	NA	4685	1	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGTGTGAGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44504115	44504846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_44504100_44504800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022712	chr7	+	654	3	ISM	ENSMUSG00000002963.18	ENSMUST00000098478.7	1550	15	-120	3923	63	-3900	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGTGAAGCCCCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	44506645	44508150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44506979_44507586_44507634_44507876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022713	chr7	+	293	2	ISM	ENSMUSG00000002963.18	ENST00000600573.5	1464	15	1119	2822	1119	-2822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGGACATGGGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	44507962	44509228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44508174_44509146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022714	chr7	+	280	4	ISM	ENSMUSG00000002963.18	ENST00000600573.5	1464	15	2474	1716	2474	-1716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGAGGCGCAGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44509317	44510334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44509370_44509500_44509609_44509783_44509856_44510286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022715	chr7	+	249	3	ISM	ENSMUSG00000002963.18	ENST00000600573.5	1464	15	3893	893	3893	-893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGTCCCAAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	44510736	44511157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44510839_44510923_44510986_44511072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022716	chr7	+	292	4	ISM	ENSMUSG00000002963.18	ENST00000600573.5	1464	15	4081	228	4081	-228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCGGACATGGTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	44510924	44511822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44510986_44511072_44511183_44511617_44511706_44511789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022717	chr7	+	629	3	ISM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	5050	0	4789	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACTTAGCAGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44511632	44512416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44511706_44511789_44511852_44511922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022718	chr7	-	302	2	NNC	ENSMUSG00000038502.18	novel	1539	13	NA	NA	5898	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTTGCTGTCCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44513156	44512495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_44512600_44512958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022719	chr7	-	387	3	ISM	ENSMUSG00000038502.18	ENST00000391842.5	1482	12	5195	-2	5166	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTTGCTGTCCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44513888	44512495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44512603_44512958_44513157_44513806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022720	chr7	-	307	3	ISM	ENSMUSG00000038502.18	ENST00000599732.5	1539	13	4017	1689	4017	-1687	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCCGGGGTGCCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	44515037	44514184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44514260_44514336_44514427_44514895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022721	chr7	-	347	3	ISM	ENSMUSG00000038502.18	ENST00000599732.5	1539	13	2720	1841	2720	-1839	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTGCCGGGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	44516334	44514336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44514427_44514895_44515052_44516233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022722	chr7	-	317	3	ISM	ENSMUSG00000038502.18	ENST00000599732.5	1539	13	2519	2399	2519	-2397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCAGCTGAGGGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	44516535	44514894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44515052_44516233_44516342_44516483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022723	chr7	-	420	2	ISM	ENSMUSG00000038502.18	ENST00000599732.5	1539	13	-2	4303	-2	-4301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTGGCTGGGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	44519056	44516798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44516937_44518774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022724	chr7	-	663	1	ISM	ENSMUSG00000002968.10	ENSMUST00000208253.2	3693	18	14964	0	14937	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	44526851	44526188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44526200_44526900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022725	chr7	-	310	2	ISM	ENSMUSG00000002968.10	ENST00000312865.10	2278	18	12265	-3	12259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCTCCCGTGACTGACG	NA	NA	NA	NA	NA	NA	NA	NA	44529529	44528807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44528939_44529350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022726	chr7	-	366	3	ISM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	11260	970	11258	-960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCTCCTGGAGCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	44530530	44529784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44529895_44529990_44530063_44530346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022727	chr7	-	362	3	ISM	ENSMUSG00000002968.10	ENST00000538643.5	1619	13	7601	3752	7601	-3752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGACGAGGTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44534187	44532576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44532609_44533542_44533672_44533986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022728	chr7	-	333	2	ISM	ENSMUSG00000002968.10	ENST00000538643.5	1619	13	-153	12698	-98	-12698	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCGCGGCCGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	44541941	44541522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44541569_44541654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022729	chr7	+	472	4	FSM	ENSMUSG00000011658.17	ENST00000526575.1	469	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTGCCATGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44545613	44547030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_44545787_44545970_44546093_44546684_44546754_44546922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022730	chr7	+	458	1	ISM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	4068	20	3895	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTCCCAGGCGCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44549570	44550028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44549600_44550000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022731	chr7	-	896	1	Genic_Genomic	ENSMUSG00000109324.3	novel	NA	NA	NA	NA	9436	1	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGTTTGCGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	44626307	44625411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_44625400_44626300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022732	chr7	-	984	2	ISM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	8867	133	8694	-133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAGACAAGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44627049	44625545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44626408_44626927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022733	chr7	-	961	6	ISM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	584	0	567	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44646419	44640645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022734	chr7	-	867	4	FSM	ENSMUSG00000003190.13	ENST00000614495.4	865	4	2	-4	2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTTTTTGTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44647355	44640738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_44640879_44645967_44646111_44646301_44646417_44646886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022735	chr7	-	862	4	NIC	ENSMUSG00000003190.13	novel	1090	6	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTATTTTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44647357	44640741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_44640875_44645967_44646111_44646301_44646417_44646886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022736	chr7	-	363	3	ISM	ENSMUSG00000003190.13	ENST00000619007.4	1090	6	3483	-1	3112	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTATTTTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44643874	44640741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44640875_44643553_44643696_44643786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022737	chr7	-	369	3	ISM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	899	2905	882	-1255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGCTGGCGCTGCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	44646104	44643550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44643696_44643786_44643874_44645967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022738	chr7	-	375	1	ISM	ENSMUSG00000007837.12	ENSMUST00000210690.2	1623	8	8719	0	7694	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTCTGGGCGCATT	NA	NA	NA	NA	NA	NA	NA	NA	44703382	44703007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44703000_44703400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022739	chr7	-	430	2	ISM	ENSMUSG00000007837.12	ENSMUST00000210500.2	922	7	7093	-150	7087	147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCGTGTATTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44703989	44703238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44703622_44703942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022740	chr7	+	1418	5	ISM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	13673	-3	13603	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTTGTTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44725552	44727637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022741	chr7	-	459	1	Genic_Genomic	ENSMUSG00000019539.12	novel	NA	NA	NA	NA	8851	1	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTGTCTGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	44732794	44732335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_44732300_44732800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022742	chr7	-	1089	5	ISM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	3520	0	3520	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44738125	44732336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022743	chr7	-	756	5	ISM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	530	785	530	-785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGTTCCGGGATCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	44741115	44733121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022744	chr7	-	575	3	ISM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	3	5584	3	-5584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACCTCGCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44741642	44737920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44738125_44740864_44741113_44741519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022745	chr7	-	517	3	ISM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	52	5584	52	-5584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACCTCGCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44741593	44737920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44738125_44740864_44741113_44741528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022746	chr7	-	1242	5	ISM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	1225	0	1119	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACACCTCTTGATTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	44752050	44742413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022747	chr7	-	1350	6	ISM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	54	792	-52	-718	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATGCAGGATGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44753221	44743205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022748	chr7	-	618	3	ISM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	1260	2108	1260	-2108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACCTAGGTGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44751909	44744595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44744854_44751333_44751610_44751825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022749	chr7	-	788	3	ISM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	501	8846	501	-8846	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCATCTCCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	44752668	44751333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44751610_44751825_44752096_44752426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022750	chr7	-	665	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGAGTCTCATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	44773866	44771801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022751	chr7	-	632	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44773839	44771802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_44771983_44772252_44772383_44772591_44772663_44772842_44772975_44773720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022752	chr7	-	626	5	NNC	ENSMUSG00000003429.12	novel	661	5	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44773834	44771802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772969_44773720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022753	chr7	-	921	6	ISM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	1478	0	1343	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44776707	44774981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022754	chr7	-	1026	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	44778164	44774981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022755	chr7	-	635	7	FSM	ENSMUSG00000074129.15	ENST00000621674.4	661	7	26	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCCAACTAGGGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44778188	44775320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776929_44776993_44778123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022756	chr7	-	408	3	ISM	ENSMUSG00000089989.11	ENSMUST00000209467.2	1477	13	2201	1573	2201	-1573	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTCATTCACCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	44783454	44776918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44776993_44781651_44781837_44783305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022757	chr7	-	458	3	ISM	ENSMUSG00000110206.2	ENSMUST00000211429.2	1358	8	1769	1056	1540	-130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTCCACCCTGGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	44783940	44781667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44781837_44783305_44783451_44783796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022758	chr7	-	467	5	FSM	ENSMUSG00000110206.2	ENSMUST00000211246.2	852	5	-14	399	-14	-399	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGAATTTCTCTCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	44785494	44783348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_44783451_44783796_44783941_44784545_44784600_44785087_44785202_44785441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022759	chr7	-	1204	1	Genic_Genomic	ENSMUSG00000007833.16	novel	NA	NA	NA	NA	12450	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTTTTTGTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	44791531	44790327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_44790300_44791500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022760	chr7	-	358	2	ISM	ENSMUSG00000007833.16	ENST00000540132.5	1633	11	9548	15	9522	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACACTACAGGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	44794459	44793949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44794139_44794290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022761	chr7	-	602	5	ISM	ENSMUSG00000007833.16	ENST00000540132.5	1633	11	7829	965	7803	-965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGTTGCAGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	44796178	44794899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022762	chr7	-	574	4	ISM	ENSMUSG00000007833.16	ENST00000540132.5	1633	11	7048	1681	7022	-1681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCTGAGGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44796959	44795615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44795714_44796046_44796233_44796585_44796739_44796822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022763	chr7	-	426	3	ISM	ENSMUSG00000007833.16	ENST00000455361.6	1968	14	6754	3452	6754	-2133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAAAGCCAAGGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	44797227	44796067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_44796233_44796822_44797005_44797148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022764	chr7	+	312	3	ISM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	392	2283	392	-2282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGCCCTCGGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	44805758	44807206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44805824_44806155_44806223_44807026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022765	chr7	+	328	3	ISM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	3046	264	3046	-263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTCACCGCAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	44808412	44809225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44808544_44808676_44808753_44809104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022766	chr7	+	346	3	ISM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	3308	0	3308	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	44808674	44809489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44808753_44809104_44809249_44809365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022767	chr7	+	1131	4	ISM	ENSMUSG00000030796.18	ENSMUST00000097216.5	1948	11	11553	54	11553	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTATGTTTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	44878187	44883005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_44878237_44880732_44880895_44881606_44881760_44882238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022768	chr7	+	763	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	0	-110	0	110	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGCAGTGGTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	44974388	44975151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_44974400_44975200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022769	chr7	-	499	5	FSM	ENSMUSG00000003872.10	ENST00000391864.7	544	5	45	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGTGTCTTGTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	45019981	45017314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45017423_45017727_45017892_45019338_45019411_45019550_45019670_45019945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022770	chr7	-	672	1	Genic_Genomic	ENSMUSG00000063511.12	novel	NA	NA	NA	NA	17690	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTCTTACTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	45026547	45025875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_45025900_45026500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022771	chr7	-	932	4	ISM	ENSMUSG00000063511.12	ENST00000221448.9	1333	9	10928	0	10928	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTAGTGGACATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	45033309	45026015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45026676_45026779_45026868_45030140_45030243_45033227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022772	chr7	-	897	4	ISM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	11883	175	10954	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATATCTGATGGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	45033283	45026051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022773	chr7	-	485	3	ISM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	12115	-138	12115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGGGGGAGGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	45071932	45071183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45071430_45071515_45071631_45071808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022774	chr7	-	566	2	ISM	ENSMUSG00000003868.15	ENSMUST00000211214.2	2312	18	2756	12491	-717	-12353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTTGGGTGCATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	45084764	45083674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45083781_45084304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022775	chr7	-	543	2	ISM	ENSMUSG00000003868.15	ENSMUST00000211214.2	2312	18	1544	13121	1544	-12983	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGTGAGCTGAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	45085976	45084304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45084762_45085890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022776	chr7	-	979	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	-9	-2	-9	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	3814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTTTCTATATATG	NA	NA	NA	NA	NA	NA	NA	NA	45109317	45107365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022777	chr7	-	972	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	NA	NA	NA	NA	NA	NA	NA	45109308	45107367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_45107708_45107954_45108085_45108507_45108655_45108953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022778	chr7	-	965	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	0	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	NA	NA	NA	NA	NA	NA	NA	45109308	45107367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_45107708_45107958_45108082_45108507_45108655_45108953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022779	chr7	-	970	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	-8	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	NA	NA	NA	NA	NA	NA	NA	45109316	45107367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_45107708_45107958_45108085_45108513_45108655_45108953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022780	chr7	-	955	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	NA	NA	NA	NA	NA	NA	NA	45109308	45107367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_45107708_45107958_45108072_45108507_45108655_45108953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022781	chr7	-	969	4	NNC	ENSMUSG00000050708.17	novel	968	4	NA	NA	-3	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	NA	NA	NA	NA	NA	NA	NA	45109311	45107367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_45107708_45107958_45108106_45108530_45108655_45108953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022782	chr7	-	566	4	ISM	ENSMUSG00000003873.12	ENST00000354470.7	433	5	503	-166	503	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCCTTGTCCGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	45115696	45111118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022783	chr7	-	509	3	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	1510	0	1449	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45114750	45111120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45111387_45112822_45112928_45114612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022784	chr7	-	274	1	NIC	ENSMUSG00000003873.12	novel	801	6	NA	NA	4805	0	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45111394	45111120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_45111100_45111400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022785	chr7	-	476	4	ISM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	772	185	649	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGAAGAAGATGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	45115550	45111305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022786	chr7	-	462	4	ISM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	564	1681	503	3	internal_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGAGACCTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45115696	45112801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45112928_45114612_45114749_45115400_45115548_45115643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022787	chr7	-	136	1	NIC	ENSMUSG00000003873.12	novel	801	6	NA	NA	3262	3	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGAGACCTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45112937	45112801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_45112800_45112900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022788	chr7	-	204	3	FSM	ENSMUSG00000003873.12	ENST00000539787.2	293	3	-1	90	-1	-90	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCATGGGCTGGACACT	NA	NA	NA	NA	NA	NA	NA	NA	45116200	45112894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45112928_45114612_45114749_45116165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022789	chr7	-	485	4	ISM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	1	3498	1	-1814	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGTAGGCAGCCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	45116321	45114618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45114749_45115400_45115548_45115643_45115696_45116165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022790	chr7	-	590	5	FSM	ENSMUSG00000011382.9	ENST00000523250.5	586	5	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGACAGATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45138187	45124684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45124800_45125028_45125177_45128432_45128558_45137483_45137596_45138097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022791	chr7	-	731	5	FSM	ENSMUSG00000011382.9	ENST00000522614.5	730	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCCTGCGACAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	45138187	45124687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45124800_45131212_45131466_45136164_45136329_45137483_45137596_45138097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022792	chr7	-	1325	1	Genic_Genomic	ENSMUSG00000030824.18	novel	NA	NA	NA	NA	11504	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTTGTGATTCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	45141205	45139880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_45139900_45141200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022793	chr7	-	1521	3	ISM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	8506	781	8506	420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTGCCCAAAGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45144203	45142111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45143374_45143540_45143638_45144041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022794	chr7	-	2034	2	FSM	ENSMUSG00000040435.13	ENSMUST00000167273.2	2809	2	780	-5	780	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	45174790	45172340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45172747_45173162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022795	chr7	-	1877	2	ISM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	11	861	11	-856	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGATCAGGACCCCGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45175681	45173201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45174816_45175418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022796	chr7	+	483	3	ISM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	43	13709	43	-13708	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACTAGCTGCTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	45219619	45225426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45219824_45224854_45224930_45225222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022797	chr7	+	372	3	ISM	ENSMUSG00000030826.20	ENSMUST00000211173.2	1684	12	2581	4682	2581	-4682	internal_fragment	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCCAGTCTGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45224873	45234452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45224930_45225222_45225427_45234340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022798	chr7	+	371	3	ISM	ENSMUSG00000030826.20	ENSMUST00000211173.2	1684	12	2994	4480	2994	-4480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCACTGCGATGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	45225286	45234654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45225427_45234340_45234452_45234534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022799	chr7	+	403	3	ISM	ENSMUSG00000030826.20	ENSMUST00000211173.2	1684	12	12041	4132	12041	-4132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAACTTCCCACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	45234333	45235002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45234452_45234534_45234655_45234837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022800	chr7	+	378	3	ISM	ENSMUSG00000030826.20	ENSMUST00000211173.2	1684	12	12291	1919	12291	-1919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTCCCCACGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	45234583	45237215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45234655_45234837_45235002_45237072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022801	chr7	+	355	3	ISM	ENSMUSG00000030826.20	ENSMUST00000211173.2	1684	12	12584	1689	12584	-1689	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCCTGTGTGGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	45234876	45237445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45235002_45237072_45237216_45237358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022802	chr7	+	353	3	ISM	ENSMUSG00000030826.20	ENSMUST00000211173.2	1684	12	14782	1346	14782	-1346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATGAAGGCAAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	45237074	45237788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45237216_45237358_45237445_45237662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022803	chr7	+	344	2	ISM	ENSMUSG00000030826.20	ENSMUST00000211173.2	1684	12	15583	138	15583	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTCAAGGGAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	45237875	45238996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45237953_45238729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022804	chr7	+	311	1	Genic_Genomic	ENSMUSG00000030826.20	novel	NA	NA	NA	NA	16533	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTATCATGCTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	45238825	45239136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_45238800_45239100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022805	chr7	-	950	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	4	-3	4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAGATATGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	45264910	45263306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45263735_45264289_45264394_45264492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022806	chr7	-	429	1	Genic_Genomic	ENSMUSG00000030827.6	novel	NA	NA	NA	NA	1179	3	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAGATATGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	45263735	45263306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_45263300_45263700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022807	chr7	+	186	2	ISM	ENSMUSG00000042918.18	ENST00000356751.8	1511	8	180	2691	180	-2691	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGATCCTCCTCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	45291160	45291722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45291245_45291620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022808	chr7	+	1119	7	ISM	ENSMUSG00000042918.18	ENST00000356751.8	1511	8	768	0	768	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCCTTGGGTCTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	45291748	45294413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022809	chr7	+	127	1	ISM	ENSMUSG00000042918.18	ENSMUST00000148532.4	1606	10	4870	222	3306	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACCCTTGGGTCTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	45294286	45294413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45294300_45294400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022810	chr7	+	1711	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	126	0	-55	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCAAGCTGGGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	45354637	45359627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022811	chr7	-	1782	1	Genic_Genomic	ENSMUSG00000057342.16	novel	NA	NA	NA	NA	3967	8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTCTTCAAATTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45360664	45358882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_45358900_45360700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022812	chr7	+	1626	2	ISM	ENSMUSG00000059070.17	ENSMUST00000210640.2	2989	7	7	3442	7	-3429	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTCAACCAGTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	45364887	45366818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45365267_45365571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022813	chr7	+	1361	2	NNC	ENSMUSG00000059070.17	novel	2989	7	NA	NA	220	-3478	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCGTGCCTTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	45365100	45366769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_45365267_45365574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022814	chr7	+	1744	5	ISM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	-1187	348	-1187	-336	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATCAGAGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	45366307	45369911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022815	chr7	+	292	2	ISM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	220	1488	220	-1483	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCGGGGTGCTACGCC	NA	NA	NA	NA	NA	NA	NA	NA	45367800	45368764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45368005_45368676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022816	chr7	+	611	5	ISM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	1095	-7	1095	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTGTTCATTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	45368675	45370259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022817	chr7	+	483	4	NNC	ENSMUSG00000059070.17	novel	679	6	NA	NA	1416	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTGTTCATTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	45368996	45370259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_45369065_45369343_45369443_45369717_45369912_45370137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022818	chr7	+	427	3	ISM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	1751	-7	1751	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTGTTCATTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	45369331	45370259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45369443_45369717_45369912_45370137
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022819	chr7	-	1443	3	ISM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	6064	-4	5631	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGGAACGCACTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	45457671	45456056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45457273_45457356_45457512_45457599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022820	chr7	-	1218	1	Genic_Genomic	ENSMUSG00000003269.18	novel	NA	NA	NA	NA	6027	3	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTAGGAACGCACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	45457275	45456057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_45456100_45457300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022821	chr7	-	874	1	Genic_Genomic	ENSMUSG00000053801.19	novel	NA	NA	NA	NA	4694	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGAGCTTCTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	45475519	45474645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_45474600_45475500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022822	chr7	-	1189	3	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	3141	-1	3141	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCCTCTGAGCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	45477072	45474649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45475518_45476564_45476763_45476949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022823	chr7	-	683	4	ISM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	648	1946	648	-1946	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAAAGTCTGGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	45479565	45476596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45476763_45476949_45477093_45477203_45477418_45479405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022824	chr7	+	1387	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	212	0	-143	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTCCCTGCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	45522407	45533156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022825	chr7	+	363	2	ISM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	12328	1137	12328	-1137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCGCCCTTCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	45558852	45565696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45559026_45565506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022826	chr7	-	218	1	Genic_Genomic	ENSMUSG00000040212.13	novel	NA	NA	NA	NA	2615	4	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCCTCTTCCTTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	45567660	45567442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_45567400_45567700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022827	chr7	-	776	5	FSM	ENSMUSG00000040212.13	ENSMUST00000164119.3	784	5	10	-2	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTCGGCTCCTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45570265	45567449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570059
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022828	chr7	-	172	2	NNC	ENSMUSG00000040212.13	novel	736	5	NA	NA	852	-1312	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGGCCTCTGCCAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45569423	45568766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_45568883_45569367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022829	chr7	-	318	3	ISM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	4	1972	4	-1964	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTGCACGTGGAACACC	NA	NA	NA	NA	NA	NA	NA	NA	45570824	45569418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45569462_45569712_45569829_45570665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022830	chr7	-	1110	8	FSM	ENSMUSG00000030834.8	ENST00000565566.1	1121	8	12	-1	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCGCCAGGGGCGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45678583	45663491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_45663671_45664837_45665018_45665802_45665939_45666897_45666960_45667988_45668115_45669561_45669691_45669964_45670091_45678411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022831	chr7	-	327	2	ISM	ENSMUSG00000030834.8	ENST00000565566.1	1121	8	8428	6074	8428	-6074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGTGAGTGCAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45670167	45669566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45669691_45669964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022832	chr7	-	401	2	ISM	ENSMUSG00000030834.8	ENST00000546162.6	1216	8	4	6472	4	-6471	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGCTGCTTCTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	45678591	45669963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45670185_45678411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022833	chr7	+	496	5	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	11540	33037	11540	-33037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGCTACAGGGTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45694814	45700108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022834	chr7	+	574	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	16417	26987	16417	-26987	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAAGGTATCAACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	45699691	45706158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45699800_45699969_45700121_45703925_45704101_45706018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022835	chr7	+	703	5	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	16709	25189	16709	-25189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACACGCCATCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	45699983	45707956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022836	chr7	+	463	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	27917	17179	27917	-17179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCGTCCACCCCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	45711191	45715966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45711257_45712390_45712487_45715585_45715805_45715883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022837	chr7	+	560	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	29116	15181	29116	-15181	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTCCCAAAGAGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	45712390	45717964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45712487_45715585_45715805_45715883_45715967_45717802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022838	chr7	+	563	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	32311	14949	32311	-14949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTGGCCGGCGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	45715585	45718196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45715805_45715883_45715967_45717802_45717963_45718095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022839	chr7	+	557	5	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	32608	12875	32608	-12875	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGGAGGGGCAGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	45715882	45720270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022840	chr7	+	506	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	34818	11090	34818	-11090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGGTGAGGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45718092	45722055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45718223_45719346_45719461_45720198_45720327_45721921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022841	chr7	+	478	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	36065	7560	36065	-7560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCATCACTCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	45719339	45725585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45719461_45720198_45720327_45721921_45722064_45725498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022842	chr7	+	467	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	36923	5584	36923	-5584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGTCCTGAAAAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	45720197	45727561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45720327_45721921_45722064_45725498_45725583_45727449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022843	chr7	+	490	5	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	42223	415	42223	-415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGGCTACAACCATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	45725497	45732730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022844	chr7	+	679	3	ISM	ENSMUSG00000030835.7	ENST00000678192.1	3984	30	45770	-4	45639	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCGTTGGTCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	45728913	45733482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45729017_45730818_45730939_45733026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022845	chr7	+	435	4	ISM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	45639	0	45639	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACGCACGTGAGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	45728913	45733145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_45729017_45730818_45730939_45732658_45732752_45733026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022846	chr7	-	418	3	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	74037	-4	74037	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTCTTTGCTACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45755367	45753965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45754186_45754887_45754951_45755232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022847	chr7	-	484	3	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	61909	12387	61909	-12351	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCGCATCATCCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	45767495	45766356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45766497_45766595_45766838_45767393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022848	chr7	-	470	3	ISM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	60898	12625	60898	-12589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAACTGCAGTCCATAACA	NA	NA	NA	NA	NA	NA	NA	NA	45768506	45766594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45766838_45767393_45767494_45768379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022849	chr7	-	479	3	ISM	ENSMUSG00000040136.11	ENSMUST00000033123.8	4877	39	13000	52525	12963	-52525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGGGGTCTAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	45816441	45806530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_45806696_45815342_45815532_45816316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022850	chr7	+	1860	3	FSM	ENSMUSG00000009471.5	ENSMUST00000072514.3	1861	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTGGCTTTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	46025898	46028523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_46026724_46027163_46027243_46027567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022851	chr7	+	959	1	Genic_Genomic	ENSMUSG00000009471.5	novel	NA	NA	NA	NA	1668	1	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTGGCTTTTCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	46027565	46028524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_46027600_46028500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022852	chr7	+	1998	2	FSM	ENSMUSG00000058975.8	ENSMUST00000025202.8	7760	2	653	5109	-498	-5109	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAGGAAGAAATTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	46046573	46077669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_46047672_46076769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022853	chr7	+	1112	2	ISM	ENSMUSG00000058975.8	ENSMUST00000160433.3	3156	4	29771	3296	29771	2054	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCAGGGCGGCGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	46076842	46084832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_46077704_46084581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022854	chr7	-	3661	3	ISM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	17703	-21	17703	21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGGCTCAGGACATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	46342401	46335510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_46338880_46339226_46339320_46342202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022855	chr7	-	503	3	ISM	ENSMUSG00000040026.9	ENSMUST00000006956.9	555	4	594	0	594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCGCTGTCACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	46364530	46361421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_46361689_46362012_46362152_46364433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022856	chr7	+	1588	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	46495262	46505051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022857	chr7	+	463	3	ISM	ENSMUSG00000063229.16	ENSMUST00000005051.6	1766	8	-11	6610	-11	-2955	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGGGCGAGATGATGG	NA	NA	NA	NA	NA	NA	NA	NA	46496543	46498440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_46496813_46497019_46497170_46498396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022858	chr7	+	282	1	ISM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	9507	0	7750	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	46504769	46505051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_46504800_46505100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022859	chr7	+	822	6	FSM	ENSMUSG00000030851.16	ENST00000536880.5	823	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATAAACTCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	46515831	46527291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_46515951_46519064_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022860	chr7	+	537	4	FSM	ENSMUSG00000030851.16	ENST00000546146.5	567	4	33	-3	33	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAAACTCGCCACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	46515863	46527294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_46515951_46522335_46522510_46525099_46525218_46527136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022861	chr7	-	1697	8	ISM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	9185	-8	9185	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGCAAACGTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	46560532	46538688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022862	chr7	+	471	2	ISM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	2399	1009	2399	-1009	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCAGATGCTCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	46702747	46703516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_46702863_46703160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022863	chr7	+	470	1	ISM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	3707	0	3707	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCCTGACTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46704055	46704525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_46704100_46704500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022864	chr7	-	1512	1	FSM	ENSMUSG00000101906.2	ENSMUST00000188039.2	1516	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGTCAAGACAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	47617938	47616426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_47616400_47617900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022865	chr7	-	444	4	FSM	ENSMUSG00000030470.16	ENST00000649842.1	443	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTTCTCACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	48489305	48480374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_48480455_48482309_48482404_48483486_48483620_48489168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022866	chr7	-	451	4	ISM	ENSMUSG00000030470.16	ENSMUST00000167786.4	899	6	8040	230	3946	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCTTTCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	48485359	48480375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_48480455_48482309_48482404_48483486_48483620_48485214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022867	chr7	-	435	4	NNC	ENSMUSG00000030470.16	novel	443	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGCTTTCTCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	48489305	48480375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_48480455_48482309_48482404_48483494_48483620_48489168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022868	chr7	-	537	4	ISM	ENSMUSG00000030470.16	ENSMUST00000167786.4	899	6	4090	2164	-4	-1934	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGGGTTGGACAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	48489309	48482309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_48482404_48483486_48483620_48485214_48485384_48489168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022869	chr7	-	466	4	ISM	ENSMUSG00000030470.16	ENSMUST00000032658.14	877	6	-24	3373	-24	-3145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGCTGCTGAGAAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	48497805	48483520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_48483620_48485214_48485384_48489168_48489307_48497745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022870	chr7	+	420	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	14	61035	14	-60729	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGAGAGGCCAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	49185653	49195840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49185781_49195547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022871	chr7	+	802	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	9904	58783	9904	-58477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCCTTGGCAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	49195543	49198092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49195840_49197586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022872	chr7	+	786	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	12256	55139	12256	-54833	internal_fragment	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGACTCCTTGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	49197895	49201736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49198290_49201344
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022873	chr7	+	450	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	15914	50057	15914	-49751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCGCCGCTTGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	49201553	49206818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49201798_49203962_49204008_49206657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022874	chr7	+	353	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	21015	48231	21015	-47925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATTGAAGGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	49206654	49208644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49206819_49208455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022875	chr7	+	408	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	29323	34674	29323	-34368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGCACCCTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	49214962	49222201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49215029_49220439_49220524_49220881_49220994_49222055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022876	chr7	+	420	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	35253	31307	35253	-31001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTGTCTAATAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	49220892	49225568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49220994_49222055_49222202_49225395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022877	chr7	+	415	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	36474	24170	36474	-23864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGGATACTGAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	49222113	49232705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49222202_49225395_49225569_49232551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022878	chr7	+	418	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	46912	21883	46912	-21577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTCGGATCCTTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	49232551	49234992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49232706_49233797_49233961_49234891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022879	chr7	+	366	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	48153	19324	48153	-19018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTCTCGAGAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	49233792	49237551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49233961_49234891_49234993_49237454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022880	chr7	+	454	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	51863	12674	51863	-12368	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGGCCACCCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	49237502	49244201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49237551_49238897_49239067_49243964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022881	chr7	+	308	2	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	58323	9903	58323	-9597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGATCATCCTGGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	49243962	49246972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49244201_49246902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022882	chr7	+	569	4	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	61637	2495	61637	-2189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGACAGCACTGAAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	49247276	49254380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49247322_49248024_49248222_49248511_49248631_49254172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022883	chr7	+	643	3	ISM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	62935	49	62935	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGAGACACTGAAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	49248574	49256826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49248631_49254172_49254377_49256443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022884	chr7	+	415	1	ISM	ENSMUSG00000052512.18	ENSMUST00000064395.13	11317	38	360529	2955	70826	5	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTTTAAATGGAAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	49256465	49256880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49256500_49256900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022885	chr7	+	329	2	ISM	ENSMUSG00000039745.9	ENST00000531058.1	583	4	0	11325	0	-11325	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACCATTTTCTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	49409331	49411926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49409542_49411807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022886	chr7	+	356	3	ISM	ENSMUSG00000039745.9	ENST00000531058.1	583	4	24	866	24	-866	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTTATGCTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	49409355	49422385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49409542_49411807_49411916_49422323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022887	chr7	+	375	3	ISM	ENSMUSG00000039745.9	ENST00000531058.1	583	4	2475	-1	2475	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGATGTGCCCAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	49411806	49423252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_49411916_49422323_49422386_49423048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022888	chr7	+	205	1	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	13716	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGATGTGCCCAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	49423047	49423252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_49423000_49423300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022889	chr7	+	436	3	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	61448	0	61448	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTATGGAGATGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	51237390	51245208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_51237565_51243371_51243458_51245032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022890	chr7	+	1285	1	FSM	ENSMUSG00000078636.5	ENSMUST00000107041.5	1232	1	-22	-31	-22	31	mono-exon	FALSE	NA	NA	NA	NA	NA	640	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGTAGTTAAAAGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	51396372	51397657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_51396400_51397700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022891	chr7	-	1691	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCTTTGTACAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	51512015	51510324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_51510300_51512000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022892	chr7	+	1275	2	ISM	ENSMUSG00000030498.16	ENSMUST00000208711.2	1962	7	65278	56	65278	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTGTCTCTGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	51602943	51644207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_51603050_51643038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022893	chr7	+	363	1	FSM	ENSMUSG00000074092.6	ENSMUST00000117187.2	264	1	24	-123	24	123	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTTATTGGTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	52405236	52405599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_52405200_52405600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022894	chr7	-	525	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-44	276	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTGCTACTTCAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	54062270	54061629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_54062012_54062127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022895	chr7	+	557	2	FSM	ENSMUSG00000051504.19	ENST00000391797.3	559	2	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCAGCCCAAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	55418157	55418914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_55418470_55418669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022896	chr7	+	392	2	NNC	ENSMUSG00000051504.19	novel	559	2	NA	NA	164	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCCAAGGCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	55418318	55418917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_55418463_55418669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022897	chr7	+	248	1	ISM	ENSMUSG00000051504.19	ENSMUST00000171077.8	1934	5	734	4311	511	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCAGCCCAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55418665	55418913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_55418700_55418900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022898	chr7	+	392	2	ISM	ENSMUSG00000033790.12	ENSMUST00000205796.2	3448	22	35141	313	35141	-313	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCTAAAAGATTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	55479079	55480881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_55479180_55480589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022899	chr7	+	370	1	ISM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	37154	0	37117	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCGGTTCAGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	55481055	55481425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_55481100_55481400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022900	chr7	+	2769	2	ISM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	86116	-16	85932	16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTATAAGCTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55577934	55582366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_55578083_55579745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022901	chr7	-	1196	2	ISM	ENSMUSG00000030452.17	ENST00000426223.1	754	4	7057	-492	7057	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGATTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55585717	55582271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_55583296_55585545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022902	chr7	-	1025	1	NIC	ENSMUSG00000030452.17	novel	2979	7	NA	NA	9477	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTGTGTGATTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	55583297	55582272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_55582300_55583300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022903	chr7	-	1524	5	ISM	ENSMUSG00000030452.17	ENST00000674289.1	1655	6	13879	11	-1657	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTATAAATTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55594431	55582283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022904	chr7	-	754	4	FSM	ENSMUSG00000030452.17	ENST00000426223.1	754	4	3	-3	3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTTCTTAATAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	55592771	55582760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_55583296_55585545_55585630_55587319_55587411_55592727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022905	chr7	+	459	2	Genic_Genomic	ENSMUSG00000078087.6	novel	399	1	NA	NA	-82	29	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTTTGCATCTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	55663681	55664191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_55663726_55663776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022906	chr7	+	481	3	FSM	ENSMUSG00000030451.17	ENST00000619355.1	474	3	-5	-2	-5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCCTAGAAGTACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	55742279	55763273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_55742463_55762851_55763022_55763145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022907	chr7	+	431	2	ISM	ENSMUSG00000030451.17	ENST00000562845.1	723	4	1	1613	1	-250	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTTTTGTTAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55758432	55763021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_55758635_55762792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022908	chr7	+	523	3	ISM	ENSMUSG00000030451.17	ENST00000562845.1	723	4	4359	-1	4359	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGCTGTGTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55762790	55764635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_55763022_55763145_55763271_55764468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022909	chr7	+	287	2	NNC	ENSMUSG00000030451.17	novel	723	4	NA	NA	4711	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGCTGTGTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55763142	55764635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_55763271_55764476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022910	chr7	+	292	2	NNC	ENSMUSG00000030451.17	novel	723	4	NA	NA	4711	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGCTGTGTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55763142	55764635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_55763271_55764471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022911	chr7	-	1837	5	ISM	ENSMUSG00000055078.8	ENSMUST00000206382.2	2607	11	56345	-55	56345	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCATGTAATTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	57102774	57057411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022912	chr7	+	318	2	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATCAACATAAAGATATT	NA	NA	NA	NA	NA	NA	NA	NA	59806336	59813721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr7_+_59806578_59813644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022913	chr7	-	1053	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	1588	-1	1588	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGCCTAACATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62112670	62111617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_62111600_62112700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022914	chr7	-	521	1	NIC	ENSMUSG00000030525.9	novel	2078	10	NA	NA	112504	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATCATGTAGGAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	62749492	62748971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_62749000_62749500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022915	chr7	-	607	3	ISM	ENSMUSG00000030525.9	ENST00000635884.1	1345	8	106049	195	106049	-195	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCCGCTACATCGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	62755947	62749166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_62749491_62754725_62754813_62755751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022916	chr7	+	729	2	ISM	ENSMUSG00000033510.15	ENST00000678495.1	2946	11	104182	865	104154	-865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGCCACGGCCACCGC	NA	NA	NA	NA	NA	NA	NA	NA	63404709	63407747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63404749_63407057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022917	chr7	+	559	1	ISM	ENSMUSG00000033510.15	ENSMUST00000058476.14	3483	14	313555	164	107498	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCCACTCAGGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	63408053	63408612	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63408100_63408600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022918	chr7	-	6404	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	-5	-3	-5	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCCTCGGTTGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	63588668	63536095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_63541546_63587714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022919	chr7	-	6392	2	NNC	ENSMUSG00000052040.11	novel	6396	2	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCCTCGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63588662	63536098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_63541539_63587710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022920	chr7	-	6384	2	NNC	ENSMUSG00000052040.11	novel	6396	2	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCCTCGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63588656	63536098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_63541541_63587714
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022921	chr7	-	6395	2	NNC	ENSMUSG00000052040.11	novel	6396	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCCTCGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63588663	63536098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_63541541_63587710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022922	chr7	-	6404	2	NNC	ENSMUSG00000052040.11	novel	6396	2	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCCTCGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	63588667	63536098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_63541546_63587710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022923	chr7	+	553	3	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	25467	38709	25467	5451	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGAGCTGTGGCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	63874374	63880035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63874404_63876463_63876757_63879804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022924	chr7	+	518	3	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	27666	33933	27666	10227	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGAAGAGAATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	63876573	63884811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63876757_63879804_63880034_63884705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022925	chr7	+	569	4	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	30892	31258	30892	12902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATCTCCTACATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	63879799	63887486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63880034_63884705_63884826_63885493_63885626_63887403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022926	chr7	+	447	2	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	41258	25381	41258	18779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGACTCTCTTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	63890165	63893363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63890420_63893170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022927	chr7	+	482	3	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	46784	20677	46784	-20677	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCAGGCTCTGCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	63895691	63898067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63895837_63897109_63897313_63897933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022928	chr7	+	538	2	ISM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	49026	632	49026	-632	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCTGGCCCCAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	63897933	63918112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63898067_63917707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022929	chr7	+	493	1	ISM	ENSMUSG00000030523.19	ENSMUST00000085222.12	5711	27	114669	779	69344	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGAGCCCGCTCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	63918251	63918744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_63918300_63918700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022930	chr7	-	267	1	Genic_Genomic	ENSMUSG00000030521.12	novel	NA	NA	NA	NA	15476	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGGGCTTATTTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	64026540	64026273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_64026300_64026500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022931	chr7	-	428	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	14873	78	14873	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAATAAAATTCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	64027143	64026352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64026553_64026915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022932	chr7	-	338	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	13422	640	13422	-640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAGGGGAAGCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	64028594	64026914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64027144_64028485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022933	chr7	-	320	3	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	9236	2252	9236	-2252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGTGATGCAGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	64032780	64028526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64028594_64030677_64030789_64032638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022934	chr7	-	207	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	7898	6364	7898	-6364	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGTGACCTCCAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	64034118	64032638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64032777_64034049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022935	chr7	-	211	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	6448	7774	6448	-7774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAAGAACAGAGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	64035568	64034048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64034118_64035426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022936	chr7	-	245	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	4651	9218	4651	-9218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAGAAGCGGCCAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	64037365	64035492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64035569_64037196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022937	chr7	-	326	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	3243	10925	3243	-10925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTAATTATTAGGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	64038773	64037199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64037366_64038613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022938	chr7	-	363	2	ISM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	2582	12374	2582	-12374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCTGAGGAAGCAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	64039434	64038648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64038772_64039194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022939	chr7	+	823	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTATTTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	64042397	64061873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_64042592_64049916_64050255_64061582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022940	chr7	+	115	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	49	227	14	-227	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGGCCAAAATAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	64042536	64061642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_64042592_64061582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022941	chr7	+	292	1	NIC	ENSMUSG00000033429.11	novel	828	3	NA	NA	19055	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	64061577	64061869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_64061600_64061900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022942	chr7	-	782	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	5168	-4	5168	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTTTAATTGAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64517577	64516795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_64516800_64517600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022943	chr7	-	479	1	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	74508	88	74284	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTAGGTGTGAAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	64946479	64946000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64946000_64946500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022944	chr7	-	465	2	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	71200	641	71200	-641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAGAGGTTCAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	64949563	64947096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64947416_64949417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022945	chr7	-	492	2	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	67941	4415	67941	-4415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTCAAAGTCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	64952822	64950870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64951032_64952491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022946	chr7	-	704	3	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	59889	6097	59889	-6097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGATAAGCCTAAATATCAA	NA	NA	NA	NA	NA	NA	NA	NA	64960874	64952552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64952967_64956117_64956285_64960751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022947	chr7	-	487	2	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	58027	15671	58027	-15671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCTCAGAGTCAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	64962736	64962126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64962180_64962302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022948	chr7	-	614	2	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	56916	16877	56692	-16334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTTGAAGAGCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	64964071	64962789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64963173_64963840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022949	chr7	-	492	2	ISM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	56282	17975	56058	-17432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGGTGAAGGACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	64964705	64963887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64964081_64964406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022950	chr7	-	460	2	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	52928	17943	52928	-17943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCATTCGGTGCTTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	64967835	64964398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64964758_64967734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022951	chr7	-	478	3	ISM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	27297	43448	27297	-43448	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGGTATCACTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	64993466	64989903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_64990175_64992364_64992468_64993362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022952	chr7	+	447	3	ISM	ENSMUSG00000078681.11	ENST00000347970.7	876	5	9	4066	9	-4031	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGAACGGAGCGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	65343204	65347619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65343318_65344917_65345076_65347443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022953	chr7	+	381	3	ISM	ENSMUSG00000078681.11	ENSMUST00000206517.2	905	6	1721	2735	1721	-2735	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACTTGACCCTCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	65344945	65348915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65345076_65347443_65347619_65348839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022954	chr7	+	534	3	ISM	ENSMUSG00000078681.11	ENSMUST00000206517.2	905	6	4219	27	4219	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTAAAATAAAGAAATCGAA	NA	NA	NA	NA	NA	NA	NA	NA	65347443	65351623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65347619_65348839_65348916_65351340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022955	chr7	+	350	1	Genic_Genomic	ENSMUSG00000078681.11	novel	NA	NA	NA	NA	8113	2	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGGCAGGGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	65351337	65351687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_65351300_65351700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022956	chr7	+	168	2	ISM	ENSMUSG00000030513.15	ENST00000559417.2	1760	12	67009	52085	66970	-52085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGAGACACAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	65578853	65581514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65578932_65581424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022957	chr7	+	189	2	ISM	ENSMUSG00000030513.15	ENST00000559417.2	1760	12	97073	20899	97034	-20899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCAGCCCCCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	65608917	65612700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65609058_65612651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022958	chr7	+	194	2	ISM	ENSMUSG00000030513.15	ENST00000559417.2	1760	12	108491	3583	108452	-3583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGGCGATCTCCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	65620335	65630016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65620408_65629894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022959	chr7	+	141	1	NIC	ENSMUSG00000030513.15	novel	4405	22	NA	NA	121575	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCCCTCGGCATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	65633458	65633599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_65633500_65633600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022960	chr7	+	577	3	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	6	10741	6	-10741	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTAGAATGGAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	65710091	65713594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65710441_65711871_65712020_65713514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022961	chr7	+	341	4	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	1785	5098	1785	-5098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAGAGTACTGGACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	65711870	65719237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65712020_65713514_65713594_65718914_65718962_65719171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022962	chr7	+	307	4	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	8828	3922	8828	-3922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGATGTGTTGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	65718913	65720413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65718962_65719171_65719275_65719866_65719947_65720337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022963	chr7	+	343	4	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	9097	3261	9097	-3261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAAGCTGTTGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	65719182	65721074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65719275_65719866_65719947_65720337_65720414_65720979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022964	chr7	+	505	4	ISM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	9793	-1	9793	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTGTGTATCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	65719878	65724336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65719947_65720337_65720414_65720979_65721074_65724069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022965	chr7	+	271	1	Genic_Genomic	ENSMUSG00000030512.14	novel	NA	NA	NA	NA	13980	1	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTGTGTATCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	65724065	65724336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_65724100_65724300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022966	chr7	+	1055	5	ISM	ENSMUSG00000075701.11	ENSMUST00000206044.2	911	6	368	-220	368	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCTGGTTTTTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	65730076	65739155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022967	chr7	+	718	2	ISM	ENSMUSG00000075701.11	ENSMUST00000206575.2	1157	6	7512	-2	7229	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65736937	65739153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65737017_65738514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022968	chr7	+	640	1	NIC	ENSMUSG00000075701.11	novel	1191	6	NA	NA	8805	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65738513	65739153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_65738500_65739200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022969	chr7	+	1291	1	ISM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	62993	0	62993	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTTGTCTCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	65822255	65823546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_65822300_65823500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022970	chr7	-	1286	1	ISM	ENSMUSG00000015133.18	ENSMUST00000015277.14	7465	34	128320	0	128320	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTTTGTCTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	65909778	65908492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_65908500_65909800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022971	chr7	+	727	4	ISM	ENSMUSG00000030510.12	ENST00000538112.6	1513	11	28	42186	14	-42178	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTAAGCAGGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	66393265	66429412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_66393500_66413836_66414097_66423337_66423457_66429298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022972	chr7	+	425	3	ISM	ENSMUSG00000030510.12	ENST00000679737.1	1167	10	25414	-1	25414	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTGGCGCCAGGACACT	NA	NA	NA	NA	NA	NA	NA	NA	66439334	66471599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_66439444_66445533_66445688_66471437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022973	chr7	+	156	1	ISM	ENSMUSG00000043831.13	ENSMUST00000207823.2	3772	4	5693	10	5674	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACATGATTCTCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	66878050	66878206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_66878000_66878200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022974	chr7	-	349	1	ISM	ENSMUSG00000030557.18	ENSMUST00000156690.8	5538	12	141280	67	141263	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGTTGTAAGCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	66881326	66880977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66881000_66881300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022975	chr7	-	1037	1	ISM	ENSMUSG00000030557.18	ENSMUST00000156690.8	5538	12	137985	2674	137968	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAAAAAAAAGCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	66884621	66883584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66883600_66884600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022976	chr7	-	1175	3	ISM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	132483	-27	132431	27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACATAACTGTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	66890158	66884025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66884977_66886271_66886399_66890061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022977	chr7	-	444	3	ISM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	121013	2316	120996	-2218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAACTGGAAATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	66901593	66886270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66886399_66890061_66890189_66901404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022978	chr7	-	351	3	ISM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	107943	6122	107926	-6024	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTACAACACTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	66914663	66890076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66890189_66901404_66901593_66914612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022979	chr7	-	365	3	ISM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	106834	17352	106782	-17352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGACCCACTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	66915807	66901404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66901593_66914612_66914673_66915690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022980	chr7	-	566	3	ISM	ENSMUSG00000030557.18	ENST00000557785.5	2842	11	77261	32097	77261	-31630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTGCTCTCTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	66945328	66915682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66915911_66918016_66918149_66945122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022981	chr7	-	396	2	ISM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	55875	61168	55858	-61070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTCATATTTAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	66966731	66945122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66945327_66966539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022982	chr7	-	340	2	ISM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	34	82485	-1	-82485	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAAATTTTAGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	67022607	66966537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_66966731_67022460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022983	chr7	-	1222	2	ISM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	115604	589	115580	-589	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAGCTATTTCCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	67179375	67163746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_67164927_67179333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022984	chr7	+	690	4	ISM	ENSMUSG00000030555.17	ENST00000394129.6	1625	10	63	44250	63	-44201	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGTGAGCTTCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	67297088	67317028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_67297199_67305055_67305318_67312074_67312275_67316910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022985	chr7	-	1717	2	ISM	ENSMUSG00000030551.15	ENST00000394171.6	3507	4	6140	4	5496	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCCTGTTTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	70003461	70001693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_70002315_70002365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022986	chr7	-	2520	3	FSM	ENSMUSG00000030551.15	ENSMUST00000032768.15	4222	3	-204	1906	-204	589	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGGAATGTGTCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	70010545	70003597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_70004680_70007510_70008039_70009635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022987	chr7	-	805	2	NNC	ENSMUSG00000030551.15	novel	1738	3	NA	NA	353	-3415	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATCTTCCAAGAGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	70008604	70007604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_70008039_70008233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022988	chr7	-	211	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	169283	-1	169283	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGATAGTTCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	71740028	71732831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71732933_71739918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022989	chr7	-	102	1	NIC	ENSMUSG00000032776.10	novel	5802	23	NA	NA	176378	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGATAGTTCACCACC	NA	NA	NA	NA	NA	NA	NA	NA	71732933	71732831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_71732800_71732900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022990	chr7	-	162	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	98325	20106	98325	-20106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACATCTTGGAGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	71810986	71752938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71753002_71810887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022991	chr7	-	161	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	96299	78081	96299	50441	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAGGAGTACAATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	71813012	71810913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71811008_71812945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022992	chr7	-	154	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	94852	80136	94852	48386	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCGCAAGCTGTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	71814459	71812968	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71813021_71814357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022993	chr7	-	197	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	75656	81533	75656	46989	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCGGTAAGTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	71833655	71814365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71814460_71833552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022994	chr7	-	149	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	73691	100784	73691	27738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATGAGGATGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	71835620	71833616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71833656_71835510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022995	chr7	-	172	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	59124	102703	59124	25819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTGGAACAAAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71850187	71835535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71835614_71850093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022996	chr7	-	173	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	57197	117260	57197	11262	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAACACAAGGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71852114	71850092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71850188_71852036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022997	chr7	-	225	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	47871	119264	47871	9258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCTGTGTCTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	71861440	71852096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71852224_71861342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022998	chr7	-	370	4	ISM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	78435	0	31469	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGACTGGGCACGTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	71877842	71861354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71861409_71863691_71863857_71873768_71873805_71877727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000022999	chr7	-	206	2	ISM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	45517	128538	45517	-16	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAAAGCATGAGGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	71863794	71861370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71861474_71863691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023000	chr7	-	509	5	ISM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	77084	2336	30118	-2336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTCTGTTAATTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	71879193	71863690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023001	chr7	-	441	4	ISM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	60960	16373	13994	-16373	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGGACCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	71895317	71877727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71877840_71878219_71878297_71879075_71879219_71895208
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023002	chr7	-	830	5	ISM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	46998	16864	32	-16864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATTTTTACCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	71909279	71878218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71878297_71879075_71879219_71895208_71895318_71896851_71896919_71908846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023003	chr7	-	511	2	ISM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	0	47573	0	-47573	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTGGCAGGCATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	71956277	71908927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_71909380_71956218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023004	chr7	+	544	2	FSM	ENSMUSG00000070509.16	ENST00000557420.1	852	2	1	307	1	-307	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCCCGCTCAACCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	73041007	73067371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_73041245_73067064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023005	chr7	+	356	1	ISM	ENSMUSG00000070509.16	ENSMUST00000119206.3	3481	3	42068	1967	26318	2	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGGCCGCCGCCGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	73067324	73067680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_73067300_73067700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023006	chr7	-	466	3	ISM	ENSMUSG00000101970.9	ENST00000629685.2	589	5	14428	-11	839	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGATTCAAGGATTTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	73190655	73165462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_73165561_73169224_73169457_73190519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023007	chr7	-	422	3	NNC	ENSMUSG00000101970.9	novel	589	5	NA	NA	842	-22	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATTTAATGTTAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	73190652	73165495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_73165561_73169224_73169449_73190519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023008	chr7	-	447	4	ISM	ENSMUSG00000101970.9	ENST00000629685.2	589	5	0	3806	0	-3806	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGCCAAAGAGAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	73205083	73169279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_73169457_73190519_73190653_73199344_73199401_73205002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023009	chr7	-	182	1	ISM	ENSMUSG00000101970.9	ENST00000629346.2	871	3	1886	0	1886	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATGATCCAATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	73189608	73189426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_73189400_73189600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023010	chr7	-	244	2	ISM	ENSMUSG00000101970.9	ENST00000629346.2	871	3	874	94	874	28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTAATTTAAAAATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	73190620	73189520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_73189664_73190519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023011	chr7	-	306	2	ISM	ENSMUSG00000101970.9	ENST00000629346.2	871	3	328	1093	328	-971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGCTATCAACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	73191166	73190519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_73190653_73190993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023012	chr7	-	588	2	Genic_Genomic	ENSMUSG00000091890.3	novel	3096	1	NA	NA	-35891	-2568	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCGCACGCACGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	73426663	73390244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_73390563_73426393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023013	chr7	-	477	2	Genic_Genomic	ENSMUSG00000091890.3	novel	3096	1	NA	NA	-35886	-2671	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACTCGGCTCTGCGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	73426658	73390347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_73390560_73426393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023014	chr7	-	841	3	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	46518	-1	46518	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGACAGCCCATGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	73616749	73592926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_73593213_73610439_73610734_73616488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023015	chr7	-	287	1	NIC	ENSMUSG00000025789.10	novel	5368	6	NA	NA	70054	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGACAGCCCATGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	73593213	73592926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_73592900_73593200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023016	chr7	-	569	3	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	41472	17625	41472	-17625	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCCGGGGTGGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	73621795	73610552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_73610734_73616488_73616747_73621665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023017	chr7	-	506	3	ISM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	6	23559	6	-23559	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATCCACCAGCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	73663261	73616486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_73616747_73621665_73621795_73663144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023018	chr7	+	711	5	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	99413	3007	99413	-3007	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGAGCGGCTCAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	75392404	75397728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023019	chr7	+	834	3	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	103514	1477	103514	-1477	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTGTCAGAGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	75396505	75399258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_75396559_75397325_75397776_75398927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023020	chr7	+	1007	3	ISM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	104523	-1	104523	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTCAAGGAGCAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	75397514	75400736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_75397776_75398927_75399259_75400321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023021	chr7	-	612	2	ISM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	1340	-1	1340	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGGTGTTGTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	75430507	75419508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_75419986_75430372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023022	chr7	+	2026	2	FSM	ENSMUSG00000055652.15	ENSMUST00000206019.2	2299	2	22	251	-1	-247	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAGGGACAGACGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75498110	75516988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_75498233_75515084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023023	chr7	+	2016	1	NIC	ENSMUSG00000055652.15	novel	3403	3	NA	NA	17112	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGCTGAAGGAGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	75515223	75517239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_75515200_75517200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023024	chr7	-	684	4	ISM	ENSMUSG00000059146.13	ENSMUST00000193002.6	2678	18	221589	54786	221583	53497	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTCCAGGGACGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	78005948	77896940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_77897147_77900448_77900622_77910031_77910163_78005774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023025	chr7	-	659	5	ISM	ENSMUSG00000059146.13	ENSMUST00000039438.9	3977	14	100050	159741	99851	-159741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCAGGAGGGGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	78127680	78110178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023026	chr7	-	1101	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	35	-2	35	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACCTACTGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	78432802	78424981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023027	chr7	+	743	5	ISM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	462	0	462	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	78433328	78442737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023028	chr7	-	938	2	ISM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	75	15935	75	-15935	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCAACCCTTTCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	78496936	78493156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_78494013_78496854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023029	chr7	+	564	2	ISM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	4	5551	4	-5548	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGACCCTGGGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	78545685	78552578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_78545763_78552091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023030	chr7	+	1188	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6332	738	6332	-738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGCATTAGGAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	78552088	78557388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_78552579_78555590_78555792_78556891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023031	chr7	+	558	3	ISM	ENSMUSG00000039236.19	ENSMUST00000038142.15	1083	4	174	3663	174	-3454	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGTCTCCCGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	78563686	78566481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_78563791_78564069_78564323_78566280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023032	chr7	+	733	3	FSM	ENSMUSG00000039236.19	ENSMUST00000120331.4	845	3	159	-47	65	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCACCACCAGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	78564141	78570144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_78564323_78566280_78566482_78569793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023033	chr7	-	783	1	Genic_Genomic	ENSMUSG00000030605.16	novel	NA	NA	NA	NA	14505	2	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCTCCTCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78784296	78783513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_78783500_78784300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023034	chr7	-	1262	4	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	7262	-1	7262	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGCCTCCTCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	78791539	78783514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023035	chr7	-	668	4	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	6002	2887	6002	-2886	internal_fragment	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCGGTGGGATCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	78792799	78786402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_78786590_78791392_78791538_78792149_78792303_78792616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023036	chr7	-	494	4	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	3673	7997	3673	-7996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCTGAAGGTTAACATG	NA	NA	NA	NA	NA	NA	NA	NA	78795128	78791512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_78791538_78792149_78792303_78792616_78792799_78794994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023037	chr7	-	529	4	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	3308	8696	3308	-8695	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTACAGCCTCGACGGA	NA	NA	NA	NA	NA	NA	NA	NA	78795493	78792211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_78792303_78792616_78792799_78794994_78795127_78795369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023038	chr7	-	540	4	ISM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	6	9151	6	-9150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCAATGCCTGGACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	78798795	78792666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_78792799_78794994_78795127_78795369_78795493_78798642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023039	chr7	-	319	1	ISM	ENSMUSG00000050382.15	ENSMUST00000183846.8	4577	19	17014	290	15452	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCCACTATGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	79348454	79348135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79348100_79348500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023040	chr7	-	609	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	14571	267	14571	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGAAGTGGGCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	79349335	79348402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79348664_79348897_79349045_79349134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023041	chr7	-	480	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	13768	837	13768	-697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTCGACACATGTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	79350138	79348972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79349045_79349134_79349334_79349929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023042	chr7	-	418	2	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	12991	1802	12991	-1662	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAAGGTGGATTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	79350915	79349937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79350137_79350696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023043	chr7	-	401	2	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	11873	2556	11873	-2416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGGGGCGGGGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	79352033	79350691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79350913_79351853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023044	chr7	-	453	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	11179	3769	11179	-3629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGCAGGAGAAGACGGG	NA	NA	NA	NA	NA	NA	NA	NA	79352727	79351904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79352031_79352200_79352327_79352526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023045	chr7	-	442	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	9326	4153	9326	-4013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATCAAGACAGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79354580	79352288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79352327_79352526_79352725_79354374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023046	chr7	-	309	2	NNC	ENSMUSG00000050382.15	novel	4524	18	NA	NA	9370	-4306	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGAAGCGGCGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	79354536	79352581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_79352725_79354370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023047	chr7	-	476	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	7052	6237	7052	-6097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGCTGGGGTCCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	79356854	79354372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79354578_79356483_79356637_79356736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023048	chr7	-	308	2	NNC	ENSMUSG00000050382.15	novel	4524	18	NA	NA	7317	-6104	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGTCAGTGCTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	79356589	79354379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_79354578_79356479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023049	chr7	-	362	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	6479	8415	6479	-8275	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCGGGAACTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	79357427	79356550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79356637_79356736_79356853_79357267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023050	chr7	-	480	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	5513	8627	5513	-8487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTGCCATCCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	79358393	79356762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79356853_79357267_79357426_79358161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023051	chr7	-	369	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	4874	9267	4874	-9127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGCAGAGGTGTTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	79359032	79357402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79357426_79358161_79358389_79358913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023052	chr7	-	648	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	3819	10017	3819	-9877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGTACATCAGGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	79360087	79358152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79358389_79358913_79359031_79359792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023053	chr7	-	592	2	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	3148	11893	3148	-11753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGGGGGCCGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	79360758	79360028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79360313_79360450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023054	chr7	-	771	3	ISM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	54	12413	54	-12273	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCACCCTGCTGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	79363852	79360548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79360845_79361160_79361362_79363578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023055	chr7	-	1015	1	ISM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	6109	0	6014	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79386719	79385704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79385700_79386700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023056	chr7	-	685	3	FSM	ENSMUSG00000030545.10	ENST00000561257.1	683	3	2	-4	2	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGCAGTTCAGTGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	79392731	79387070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_79387566_79389912_79390029_79392657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023057	chr7	-	788	2	FSM	ENSMUSG00000030545.10	ENST00000559170.1	784	2	-1	-3	-1	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGCAGTTCAGTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	79392858	79387071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_79387659_79392657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023058	chr7	-	491	1	ISM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	5263	1370	5168	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTAGCAGTTCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	79387565	79387074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79387100_79387600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023059	chr7	-	607	2	NNC	ENSMUSG00000030545.10	novel	683	3	NA	NA	2699	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCTAGCAGTTCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	79390034	79387074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_79387566_79389918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023060	chr7	-	608	2	ISM	ENSMUSG00000030545.10	ENST00000561257.1	683	3	2690	14	2690	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGGAGGCTTTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	79390043	79387088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79387566_79389912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023061	chr7	-	5085	1	ISM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	40240	0	40240	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTGGCCATGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	79530157	79525072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79525100_79530200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023062	chr7	-	5227	4	ISM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	5447	297	5447	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGCAGAACAGGAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	79564950	79525369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023063	chr7	-	2273	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACTGAGGCTTTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	79585102	79575107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023064	chr7	-	368	1	Genic_Genomic	ENSMUSG00000030541.17	novel	NA	NA	NA	NA	20093	2	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGATGTGTTTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79744959	79744591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_79744600_79745000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023065	chr7	-	665	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	19255	-1	19167	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGATGTGTTTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	79745885	79744592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023066	chr7	-	463	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	17435	770	17347	-557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGGAAACAGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	79747705	79745363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79745462_79745546_79745645_79745770_79745884_79747551
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023067	chr7	-	504	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	17118	951	17030	-738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCATGGGGAGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	79748022	79745544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79745645_79745770_79745884_79747551_79747704_79747883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023068	chr7	-	514	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	16475	1212	16387	-999	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGTCACCCGCCATTAC	NA	NA	NA	NA	NA	NA	NA	NA	79748665	79745805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79745884_79747551_79747704_79747883_79748021_79748518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023069	chr7	-	516	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	16232	3038	16144	-2825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTCAAGTCTTCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	79748908	79747631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79747704_79747883_79748021_79748518_79748663_79748745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023070	chr7	-	549	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	14482	3351	14394	-3138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCATTCTGAAGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	79750658	79747944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79748021_79748518_79748663_79748745_79748907_79750490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023071	chr7	-	486	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	12179	4002	12091	-3789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCAGTGCCAAGGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	79752961	79748595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79748663_79748745_79748907_79750490_79750657_79752869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023072	chr7	-	633	4	ISM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	3	4166	3	-3953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGGCGACCAGGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	79765137	79748759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79748907_79750490_79750657_79752869_79752962_79764909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023073	chr7	+	1105	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	12	200	12	-200	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGTCTTTGTTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	79910974	79914922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_79911172_79911568_79911680_79914125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023074	chr7	+	852	1	Genic_Genomic	ENSMUSG00000047084.9	novel	NA	NA	NA	NA	3309	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTGCTTGGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79914271	79915123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_79914300_79915100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023075	chr7	+	215	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	38	15150	6	-15150	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCGGTTCCTGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	79944258	79950182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79944340_79950048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023076	chr7	+	231	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	5794	15122	5794	-14452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGCTACAAGTGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	79950046	79950880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79950182_79950784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023077	chr7	+	175	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	10070	10781	10038	-10781	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATCACTGGAGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	79954290	79954551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79954343_79954428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023078	chr7	+	239	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	10261	9546	10229	-9546	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGGATCAAAAACCAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	79954481	79955786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79954600_79955665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023079	chr7	+	263	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	11450	9092	11418	-9092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCAGGCTTTTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79955670	79956240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79955816_79956122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023080	chr7	+	185	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	11924	7967	11892	-7967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGACGTTCACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	79956144	79957365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79956271_79957306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023081	chr7	+	200	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	13115	6100	13083	-6100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTAATTCTGGTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	79957335	79959232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79957444_79959140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023082	chr7	+	181	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	14924	4755	14892	-4755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTACAGAACAGTGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	79959144	79960577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79959237_79960488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023083	chr7	+	204	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	16327	4399	16295	-4399	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATCTTCATGCTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	79960547	79960933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79960636_79960817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023084	chr7	+	223	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	16596	3257	16564	-3257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTATATTCCATACAAG	NA	NA	NA	NA	NA	NA	NA	NA	79960816	79962075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79960929_79961964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023085	chr7	+	211	2	ISM	ENSMUSG00000038943.17	ENSMUST00000174199.8	2128	13	17742	2455	17710	-2455	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGGGTACCCTGGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	79961962	79962877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79962076_79962779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023086	chr7	+	180	3	ISM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	18612	1095	18612	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTCAACCAACATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	79962864	79964907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79962957_79963274_79963317_79964861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023087	chr7	+	392	1	ISM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	21418	0	21363	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	79965615	79966007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_79965600_79966000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023088	chr7	-	1123	6	NNC	ENSMUSG00000038930.12	novel	1140	7	NA	NA	8	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCCCTTAGTGGATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79970771	79966645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_79966799_79968586_79968775_79968988_79969090_79969839_79969962_79970049_79970447_79970609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023089	chr7	-	212	1	ISM	ENSMUSG00000030533.17	ENSMUST00000107368.9	3685	23	20506	0	14716	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGTTTGTTGTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	79975251	79975039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79975000_79975300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023090	chr7	-	246	3	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	13890	514	13890	-189	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTGGTGGTGCTGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	79976077	79975556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79975626_79975760_79975917_79976056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023091	chr7	-	233	2	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	12186	2287	12186	-1962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGACCCGCTGGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	79977781	79977329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79977447_79977665
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023092	chr7	-	573	4	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	8472	3727	8472	-3402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGGTACACTCGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79981495	79978769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79978911_79979253_79979396_79980085_79980181_79981300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023093	chr7	-	246	2	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	3798	9439	3798	-9114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGCTTCCGAGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	79986169	79984481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79984612_79986053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023094	chr7	-	244	2	ISM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	3200	11030	3200	-10705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGAGCACCAGTCGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	79986767	79986072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_79986222_79986672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023095	chr7	+	1501	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	10	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGGCTTCTTAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	79992861	79996463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023096	chr7	+	848	4	FSM	ENSMUSG00000030532.7	ENST00000559898.5	847	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTCTCTGTGCCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	79992880	79995527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_79992998_79993286_79993343_79993463_79993799_79995187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023097	chr7	-	496	3	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	7294	8098	7294	-8098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGAGAGGCCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	80012182	80009383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80009507_80010643_80010881_80012046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023098	chr7	-	494	3	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	5625	11684	5625	-11684	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCAGCACCACGATGC	NA	NA	NA	NA	NA	NA	NA	NA	80013851	80012969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80013085_80013214_80013418_80013675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023099	chr7	-	517	3	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	2681	11972	2681	-11972	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTACAAGAGCTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	80016795	80013257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80013418_80013675_80013854_80016616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023100	chr7	-	491	3	ISM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	752	16759	752	-16759	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGCTTTCTCTGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	80018724	80018044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80018134_80018253_80018399_80018467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023101	chr7	-	1479	1	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	8166	0	8166	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGCTCTTCTCGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	80040404	80038925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80038900_80040400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023102	chr7	-	1847	4	ISM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	6463	681	6463	-663	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGCTGATTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80042107	80039606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023103	chr7	-	1491	2	NNC	ENSMUSG00000030530.16	novel	3957	15	NA	NA	7203	-718	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGATCTCAGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80041367	80039661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_80041045_80041259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023104	chr7	-	166	1	ISM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	79744	217	59317	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGCTGTTAGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80105123	80104957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80105000_80105100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023105	chr7	-	180	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	55836	185	55836	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGTGTAACTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	80108604	80105143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80105280_80108560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023106	chr7	-	253	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	50786	5523	50786	-5523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTTCCGTATCCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	80113654	80110481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80110601_80113520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023107	chr7	-	245	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	49868	8597	49868	-8597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAATACAGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	80114572	80113555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80113714_80114485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023108	chr7	-	167	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	33182	25225	33182	-25225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGAGAAGGCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	80131258	80130183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80130244_80131151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023109	chr7	-	230	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	20181	38889	20181	-38889	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCGGTGAAGGTTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80144259	80143847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80143999_80144180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023110	chr7	-	145	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	18657	39222	18657	-39222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTCTCTTGGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	80145783	80144180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80144280_80145737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023111	chr7	-	172	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	14881	42200	14881	-42200	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATGTAAGTTATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	80149559	80147158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80147272_80149500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023112	chr7	-	185	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	12330	44629	12330	-44629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTGCATAATTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	80152110	80149587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80149693_80152030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023113	chr7	-	181	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	5141	50703	5141	-50703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGCATTCTTAGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	80159299	80155661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80155695_80159151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023114	chr7	-	184	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	1824	54259	1824	-54259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGTTCCACCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80162616	80159217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80159312_80162526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023115	chr7	-	202	2	ISM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	24	58162	24	-58162	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTCCACTCCACAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	80164416	80163120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80163243_80164336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023116	chr7	-	1045	1	Genic_Genomic	ENSMUSG00000030536.11	novel	NA	NA	NA	NA	90790	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTATTTTTCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	80362374	80361329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_80361300_80362400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023117	chr7	-	1085	2	ISM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	86297	1387	86297	-1387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGTAGGGTCGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	80366867	80362717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80363694_80366758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023118	chr7	+	1861	3	ISM	ENSMUSG00000038797.14	ENST00000546148.6	1871	4	-1	2041	-1	-233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGCTCCATTCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	80510670	80525899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_80510809_80512912_80513420_80524683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023119	chr7	+	1854	3	NNC	ENSMUSG00000038797.14	novel	1871	4	NA	NA	0	-236	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGGGGCTCCATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80510671	80525896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_80510809_80512915_80513420_80524683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023120	chr7	+	2098	3	NIC	ENSMUSG00000038797.14	novel	1871	4	NA	NA	2	10	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGCTGAGCTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	80510673	80526142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_80510809_80512912_80513417_80524683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023121	chr7	-	1013	5	FSM	ENSMUSG00000025724.13	ENST00000559729.5	1012	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGAATTCTGTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	80597340	80565118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80584774_80584885_80597149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023122	chr7	-	1281	5	FSM	ENSMUSG00000025724.13	ENST00000558134.5	961	5	-319	-1	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCCCTGAATTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80597521	80565123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_80565653_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023123	chr7	-	536	1	NIC	ENSMUSG00000025724.13	novel	1012	5	NA	NA	31543	1	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCCCTGAATTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80565659	80565123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_80565100_80565700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023124	chr7	-	618	3	NNC	ENSMUSG00000025724.13	novel	1057	7	NA	NA	25069	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80572133	80565124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_80565646_80565922_80565981_80572094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023125	chr7	-	717	4	ISM	ENSMUSG00000025724.13	ENST00000560266.5	1057	7	24261	0	24261	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80572941	80565124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80565653_80565922_80565981_80572094_80572133_80572848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023126	chr7	-	907	4	NNC	ENSMUSG00000025724.13	novel	961	5	NA	NA	12314	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80584888	80565124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_80565653_80572848_80572964_80577484_80577635_80584774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023127	chr7	+	577	2	Antisense	novelGene_ENSMUSG00000025724.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAACAAACAAGTAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	80565130	80565981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_+_80565660_80565933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023128	chr7	-	866	5	ISM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	12640	104	12314	-104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCAAACCTGTCGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	80584888	80565228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023129	chr7	+	549	4	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	103576	12671	103576	-12671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGCGTTCCTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	80967031	80970599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_80967196_80968815_80968865_80969070_80969207_80970399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023130	chr7	+	579	4	ISM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	110360	538	110360	-538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGCCTGGGATGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	80973815	80982732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_80973982_80975998_80976129_80977775_80977944_80982617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023131	chr7	-	444	4	ISM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	243	0	243	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	80994759	80992480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023132	chr7	-	254	3	ISM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	-2	1637	-2	-1637	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTCTATCAAGTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	80995004	80994117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80994165_80994604_80994757_80994949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023133	chr7	-	1334	1	ISM	ENSMUSG00000025586.18	ENSMUST00000098331.10	3111	12	106397	2	23840	1	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80998109	80996775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80996800_80998100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023134	chr7	-	1616	6	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	15196	-618	15196	-404	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGGCTGCTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	81006753	80997180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023135	chr7	-	281	2	NNC	ENSMUSG00000025586.18	novel	1772	10	NA	NA	16188	-3515	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTGGTGTATGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	81005761	81001542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_81001685_81005622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023136	chr7	-	603	4	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	12220	7815	12220	-7586	internal_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTAATCCTATATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	81009729	81005613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81005760_81006656_81006747_81007052_81007167_81009476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023137	chr7	-	681	4	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	10386	8864	10386	-8635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGGTAATATGCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	81011563	81006662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81006747_81007052_81007167_81009476_81009730_81011333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023138	chr7	-	827	4	ISM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	-46	9254	-46	-9025	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTGCCTCTGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	81021995	81007052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81007167_81009476_81009730_81011333_81011558_81021759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023139	chr7	-	714	4	ISM	ENSMUSG00000025586.18	ENST00000611031.4	2969	11	0	12828	0	-11577	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCCAACCAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	81086126	81009604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81009730_81011333_81011558_81021759_81021949_81085950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023140	chr7	-	649	4	ISM	ENSMUSG00000025586.18	ENST00000615198.4	2073	12	66	13535	-19	-13306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAATGTGCTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	81104442	81011333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81011558_81021759_81021949_81085950_81086126_81104381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023141	chr7	+	1443	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	10	-1	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTAGTTTTGACAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	81412682	81419240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_81412805_81417274_81417472_81418116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023142	chr7	+	1125	1	NIC	ENSMUSG00000038646.14	novel	1452	3	NA	NA	5084	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	81418114	81419239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_81418100_81419200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023143	chr7	-	765	4	ISM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	900	0	900	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGCAGTTTCGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	81438326	81431929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023144	chr7	-	405	1	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	6892	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGCAGTTTCGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	81432334	81431929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_81431900_81432300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023145	chr7	-	1458	1	ISM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	35900	0	35900	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	81443279	81441821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81441800_81443300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023146	chr7	-	1759	1	ISM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	51358	106	51286	8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCGTCCTTAGATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	81532863	81531104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81531100_81532900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023147	chr7	-	2514	2	ISM	ENSMUSG00000025104.14	ENST00000299633.7	5528	7	48863	1487	48863	-1487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCACAAATTGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81535286	81532599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_81533875_81534047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023148	chr7	+	1129	5	ISM	ENSMUSG00000030638.14	ENST00000324537.5	1442	9	98348	-1	98348	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATAAAAGACTGGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	81923067	81956618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023149	chr7	-	144	1	NIC	ENSMUSG00000038570.16	novel	2783	3	NA	NA	2047	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTCATTGTAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	82292993	82292849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_82292800_82293000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023150	chr7	-	210	2	FSM	ENSMUSG00000038570.16	ENST00000565432.1	391	2	61	120	61	-120	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACCTACAAGCGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	82294979	82292969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_82293058_82294857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023151	chr7	+	1074	2	Genic_Genomic	ENSMUSG00000063902.14	novel	1378	1	NA	NA	620	377	multi-exon	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACATTGGGGGGTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	83405731	83406866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_83406483_83406543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023152	chr7	+	1089	2	Genic_Genomic	ENSMUSG00000063902.14	novel	1378	1	NA	NA	720	492	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTTAGTGAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	83405831	83406981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_83406473_83406533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023153	chr7	+	1095	2	Genic_Genomic	ENSMUSG00000063902.14	novel	1378	1	NA	NA	725	501	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGTGAATCTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83405836	83406990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_83406475_83406533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023154	chr7	+	359	1	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGATTCACTAAAGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	83406656	83407015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr7_+_83406700_83407000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023155	chr7	-	1191	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	3242	0	3242	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAGTTTCTCACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	83530271	83529080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_83529100_83530300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023156	chr7	+	3707	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	59	726	59	-726	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCCACCACTGGAAATCG	NA	NA	NA	NA	NA	NA	NA	NA	83541266	83550014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_83541684_83544737_83544971_83546957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023157	chr7	+	1201	4	FSM	ENSMUSG00000038503.16	ENST00000561312.5	1201	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGAACCAAGTGGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	83544735	83584965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_83544971_83546957_83547550_83581534_83581798_83584854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023158	chr7	+	3101	1	Genic_Genomic	ENSMUSG00000038503.16	novel	NA	NA	NA	NA	2908	4	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTCTGTGCGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	83547643	83550744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_83547600_83550700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023159	chr7	-	1772	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	340	126	340	-126	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTTAAATGTACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	83800761	83758689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_83760010_83763458_83763639_83800489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023160	chr7	+	990	1	Genic_Genomic	ENSMUSG00000097789.3	novel	NA	NA	NA	NA	53589	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTGGTTTTTTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	84231750	84232740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_84231800_84232700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023161	chr7	-	2519	6	ISM	ENSMUSG00000030629.16	ENSMUST00000069537.3	1658	8	44939	-1061	-2	-227	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCGGGCCAGTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	84283620	84263200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023162	chr7	-	1249	4	ISM	ENSMUSG00000030629.16	ENST00000558087.5	841	5	416	-579	398	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84283202	84264252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023163	chr7	-	1243	4	NNC	ENSMUSG00000030629.16	novel	1466	6	NA	NA	398	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84283202	84264252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_84265177_84267057_84267166_84281863_84281965_84283092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023164	chr7	-	1476	6	FSM	ENSMUSG00000030629.16	ENST00000430846.5	1466	6	-10	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTTTCCCTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84328587	84264252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283189_84283446_84283618_84328517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023165	chr7	-	194	1	ISM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	74718	1280	19153	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACGTTTCCCTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84264447	84264253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_84264300_84264400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023166	chr7	-	149	1	NIC	ENSMUSG00000030629.16	novel	2955	7	NA	NA	18420	1	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACTCCTGCTGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	84265180	84265031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_84265000_84265200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023167	chr7	-	572	4	NNC	ENSMUSG00000030629.16	novel	841	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCTCTGTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	84283618	84266975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_84267166_84281863_84281965_84283092_84283202_84283446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023168	chr7	-	639	5	FSM	ENSMUSG00000030629.16	ENST00000558688.5	637	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCTCTGTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	84328579	84266975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023169	chr7	-	629	5	NNC	ENSMUSG00000030629.16	novel	637	5	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGCCTCTGTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	84328572	84266975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_84267172_84281863_84281965_84283092_84283199_84283446_84283618_84328517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023170	chr7	-	254	3	NNC	ENSMUSG00000030629.16	novel	841	5	NA	NA	78	-14903	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGACCTGCAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84283522	84281879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_84281965_84283092_84283186_84283446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023171	chr7	-	253	2	ISM	ENSMUSG00000030629.16	ENST00000616533.4	1569	6	12	19250	12	-16538	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAGTATGCTATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	84302239	84283514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_84283618_84302089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023172	chr7	-	732	2	ISM	ENSMUSG00000091239.3	ENSMUST00000165771.2	2562	6	15866	3495	15866	-3495	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGAGGAATTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	85879543	85877908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_85878094_85878996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023173	chr7	-	191	1	ISM	ENSMUSG00000001773.15	ENSMUST00000001824.7	3125	19	56095	681	53459	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATTCTACAGAATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	86369056	86368865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86368900_86369100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023174	chr7	-	233	2	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	47857	-1	47857	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATTCTACAGAATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	86374658	86368865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86369057_86374616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023175	chr7	-	267	2	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	47246	5744	47246	-5744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAATCAATCAATTAATT	NA	NA	NA	NA	NA	NA	NA	NA	86375269	86374610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86374699_86375090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023176	chr7	-	332	3	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	41488	6342	41488	-6342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTGCTTCCCTTTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	86381027	86375208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86375356_86378281_86378373_86380933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023177	chr7	-	226	3	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	39146	9442	39146	-9442	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAGCCCGATATACTAA	NA	NA	NA	NA	NA	NA	NA	NA	86383369	86378308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86378373_86380933_86381026_86383299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023178	chr7	-	224	3	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	36793	12069	36793	-12069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTACAGCAACAACACAAC	NA	NA	NA	NA	NA	NA	NA	NA	86385722	86380935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86381026_86383299_86383368_86385656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023179	chr7	-	200	3	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	31052	14450	31052	-14450	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACCTAACAAAAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	86391463	86383316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86383368_86385656_86385721_86391378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023180	chr7	-	185	2	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	26424	26453	26424	-26453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGGAGTATGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86396091	86395319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86395406_86395992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023181	chr7	-	278	2	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	11421	37281	11421	-37281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAAGTTTGACAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86411094	86406147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86406240_86410908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023182	chr7	-	279	2	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	1418	48487	1418	-48487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACCAGAGGTAACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	86421097	86417353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86417446_86420910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023183	chr7	-	238	2	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	15	52088	15	-52088	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATCCTAACTATATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	86422500	86420954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_86421098_86422405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023184	chr7	+	1034	2	FSM	ENSMUSG00000049583.16	ENST00000393294.3	1028	2	-5	-1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATACTTTCCAACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87233574	87252413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_87233749_87251553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023185	chr7	+	858	1	NIC	ENSMUSG00000049583.16	novel	1026	2	NA	NA	-96	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGATACTTTCCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	87251552	87252410	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_87251600_87252400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023186	chr7	+	460	3	ISM	ENSMUSG00000030560.18	ENST00000678915.1	1101	5	0	10327	0	8201	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCCAATGCCTCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87930601	87948806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_87930741_87946290_87946458_87948652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023187	chr7	+	364	3	ISM	ENSMUSG00000030560.18	ENST00000678915.1	1101	5	15764	7622	15764	-7622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAACAAATGTCTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	87946365	87951511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_87946458_87948652_87948806_87951392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023188	chr7	+	457	3	ISM	ENSMUSG00000030560.18	ENST00000678915.1	1101	5	18093	296	18093	-296	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGTCCACGATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	87948694	87958837	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_87948806_87951392_87951509_87958607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023189	chr7	+	264	1	ISM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	31577	963	28268	0	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTCTTTATCACTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	87958869	87959133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_87958900_87959100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023190	chr7	-	1545	1	Genic_Genomic	ENSMUSG00000039428.12	novel	NA	NA	NA	NA	197505	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTTTTATTTCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	88790463	88788918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_88788900_88790500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023191	chr7	-	1590	4	ISM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	190785	867	190758	-867	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGTGTTATGACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	88797210	88789788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023192	chr7	-	2399	1	ISM	ENSMUSG00000039405.8	ENSMUST00000041761.7	3228	2	7405	0	7405	0	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTCCCAGTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	89159389	89156990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89157000_89159400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023193	chr7	-	1670	2	FSM	ENSMUSG00000039405.8	ENSMUST00000041761.7	3228	2	1	1557	1	-237	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAGTCATATATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	89166793	89158547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_89160079_89166654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023194	chr7	-	1560	2	NNC	ENSMUSG00000039405.8	novel	3228	2	NA	NA	59	-286	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACACAGGGAATATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	89166735	89158596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_89160076_89166654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023195	chr7	-	1204	2	FSM	ENSMUSG00000039405.8	ENSMUST00000207932.2	1937	2	7	726	7	-726	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGACATGAATGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	89176388	89159036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_89160079_89176226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023196	chr7	-	150	1	NIC	ENSMUSG00000039391.12	novel	2439	15	NA	NA	21158	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTGAACCTACTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	89515855	89515705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_89515700_89515900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023197	chr7	-	228	2	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	18089	17	18089	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCGTGTAGAACTCAACGC	NA	NA	NA	NA	NA	NA	NA	NA	89518924	89515722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89515855_89518828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023198	chr7	-	235	2	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	11999	3146	11999	-3146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGGAAAAGGCCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89525014	89518851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89518955_89524882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023199	chr7	-	199	2	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	11638	9278	11638	-9278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGATGGAGGCAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	89525375	89524983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89525104_89525296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023200	chr7	-	156	2	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	10328	9588	10328	-9588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGATAGTGATCATTATT	NA	NA	NA	NA	NA	NA	NA	NA	89526685	89525293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89525376_89526611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023201	chr7	-	190	2	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	7571	10996	7571	-10996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATGGAAAGCAAACGGG	NA	NA	NA	NA	NA	NA	NA	NA	89529442	89526701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89526785_89529335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023202	chr7	-	193	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	21956	13630	6104	-13630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTCGTTAAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	89530909	89529335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89529441_89530821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023203	chr7	-	215	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	21275	15139	5423	-15139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGCTTTCTTCAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	89531590	89530844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89530969_89531499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023204	chr7	-	183	2	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	1546	15816	1546	-15816	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATCATAATAAGGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	89535467	89531521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89531591_89535353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023205	chr7	-	240	2	ISM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	8	19648	8	-19648	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCAGTGACTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	89537005	89535353	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89535478_89536889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023206	chr7	-	199	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	13186	21187	-2666	-21187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTAGGCCAATGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	89539679	89536892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89537012_89539599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023207	chr7	-	206	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	6823	23893	6784	-23893	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTTGCTCTACGGG	NA	NA	NA	NA	NA	NA	NA	NA	89546042	89539598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89539680_89545917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023208	chr7	-	188	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	5556	30232	5517	-30232	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGGACTCAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	89547309	89545937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89546062_89547245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023209	chr7	-	197	2	ISM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	339	31542	300	-31542	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGGCTTTATATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	89552526	89547247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89547308_89552389
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023210	chr7	-	213	1	ISM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	23463	0	23281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTACCTTGACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	89566949	89566736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89566700_89566900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023211	chr7	-	308	2	ISM	ENSMUSG00000062797.15	ENSMUST00000075010.12	715	6	20828	-98	20828	98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAAAATGTTCAATATT	NA	NA	NA	NA	NA	NA	NA	NA	89569402	89568029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89568216_89569280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023212	chr7	-	278	2	ISM	ENSMUSG00000062797.15	ENSMUST00000075010.12	715	6	17306	1147	17306	-1147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATTCCAATCTCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	89572924	89569274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89569400_89572771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023213	chr7	-	319	2	ISM	ENSMUSG00000062797.15	ENSMUST00000075010.12	715	6	5124	4649	5124	-4649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGGTGATGCACACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	89585106	89572776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89572924_89584934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023214	chr7	-	359	2	ISM	ENSMUSG00000062797.15	ENSMUST00000207309.2	835	4	-36	17112	-36	-16880	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAGCTCCTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	89590370	89585007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89585173_89590176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023215	chr7	-	891	3	ISM	ENSMUSG00000030619.11	ENST00000327320.8	1941	12	24200	-4	24200	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89605623	89603938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89604364_89604507_89604813_89605462
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023216	chr7	-	427	1	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	25458	4	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89604365	89603938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_89603900_89604400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023217	chr7	-	612	4	ISM	ENSMUSG00000030619.11	ENST00000528180.5	1733	10	13208	0	12824	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTGCTTTTAATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89616999	89603971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89604272_89604738_89604813_89605462_89605622_89616920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023218	chr7	-	573	4	ISM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	15922	412	15835	-412	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATATACCAAACGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	89613988	89604556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89604813_89605462_89605622_89611463_89611570_89613936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023219	chr7	-	802	3	ISM	ENSMUSG00000030619.11	ENST00000528180.5	1733	10	34	17465	11	-17292	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCGGGTGGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	89630173	89621436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_89621532_89626104_89626258_89629619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023220	chr7	+	202	3	ISM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	18	20632	18	-20632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGCAGGACATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90036460	90038123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_90036561_90036710_90036765_90038075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023221	chr7	+	203	3	ISM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	268	17088	268	-17088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGCTTTGAACCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	90036710	90041667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_90036765_90038075_90038124_90041566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023222	chr7	+	318	3	ISM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	1642	12890	1642	-12890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGACTCGCCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90038084	90045865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_90038124_90041566_90041662_90045681
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023223	chr7	+	446	3	ISM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	9237	7979	9237	-7979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTCAGATTCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90045679	90050776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_90045852_90048391_90048495_90050605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023224	chr7	+	355	3	ISM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	14158	2537	14158	-2537	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACATTCATGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	90050600	90056218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_90050777_90052238_90052318_90056118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023225	chr7	+	388	3	ISM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	15794	985	15794	-985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTTACAGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	90052236	90057770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_90052318_90056118_90056219_90057563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023226	chr7	+	712	3	ISM	ENSMUSG00000030616.17	ENST00000529581.5	1728	12	19734	0	19694	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCACATGTTTCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	90056136	90059033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_90056219_90057563_90057770_90058609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023227	chr7	+	153	1	NIC	ENSMUSG00000030616.17	novel	3757	19	NA	NA	22160	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCAGCCGATTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	90058602	90058755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_90058600_90058800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023228	chr7	-	799	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	90106437	90099907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023229	chr7	-	491	1	Genic_Genomic	ENSMUSG00000030614.9	novel	NA	NA	NA	NA	8074	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGAGGTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	90117135	90116644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_90116600_90117100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023230	chr7	-	873	4	ISM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	3278	1283	3278	-1283	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGAAATGATCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	90121931	90117928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023231	chr7	+	435	4	FSM	ENSMUSG00000052572.20	ENST00000530800.5	431	4	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAATGTTCCTTTAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	91935694	92064839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_91935814_92024761_92024939_92036122_92036199_92064776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023232	chr7	+	567	6	FSM	ENSMUSG00000030613.14	ENST00000529073.5	568	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTTTCAGAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	92216831	92227746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92224504_92224591_92227631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023233	chr7	+	2556	5	FSM	ENSMUSG00000030643.15	ENST00000260056.6	1399	5	126	-1283	126	-517	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAATGATTCAACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	92426617	92486802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_92426899_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023234	chr7	+	2236	3	ISM	ENSMUSG00000030643.15	ENST00000534141.5	3031	5	82224	425	3904	-425	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATTATTACCAGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	92473031	92486894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_92473090_92478733_92478914_92484896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023235	chr7	+	2831	1	ISM	ENSMUSG00000030643.15	ENSMUST00000032879.15	9456	5	94455	5647	16138	2	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATAGAGCCAATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	92485265	92488096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_92485300_92488100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023236	chr7	-	295	3	FSM	ENSMUSG00000030641.11	ENST00000524921.5	280	3	-8	-7	-8	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAAAGTGTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92523468	92511525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_92511695_92515778_92515858_92523421
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023237	chr7	-	179	1	NIC	ENSMUSG00000030641.11	novel	3387	6	NA	NA	11751	7	mono-exon	FALSE	NA	NA	NA	NA	NA	1795	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAAAGTGTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92511704	92511525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_92511500_92511700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023238	chr7	+	779	3	ISM	ENSMUSG00000061119.8	ENSMUST00000207594.2	2245	9	52457	540	52457	-540	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCCTTGGTTCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	92576964	92582682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_92577053_92577812_92578001_92582179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023239	chr7	-	875	2	FSM	ENSMUSG00000087412.5	ENSMUST00000133910.3	849	2	0	-26	0	26	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGCCTTTTAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	92833383	92828163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_92828866_92833210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023240	chr7	-	708	1	FSM	ENSMUSG00000087412.5	ENSMUST00000140687.2	625	1	-19	-64	-19	26	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGCCTTTTAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	92828871	92828163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_92828200_92828900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023241	chr7	-	849	2	NNC	ENSMUSG00000087412.5	novel	849	2	NA	NA	19	23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGGCCTTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	92833364	92828166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_92828862_92833210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023242	chr7	+	1332	1	ISM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	16555	0	16555	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGTCTGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	96998088	96999420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_96998100_96999400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023243	chr7	+	679	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTCCTGGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	97049214	97057010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_97049565_97056072_97056217_97056825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023244	chr7	+	156	1	FSM	ENSMUSG00000083974.2	ENSMUST00000120511.2	188	1	136	-104	136	104	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAATTCTCACCACACCTG	NA	NA	NA	NA	NA	NA	NA	NA	97055482	97055638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_97055500_97055600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023245	chr7	-	166	1	ISM	ENSMUSG00000035642.17	ENSMUST00000178078.8	723	4	25157	0	14794	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCATTAGCGATCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	97199703	97199537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_97199500_97199700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023246	chr7	-	546	3	FSM	ENSMUSG00000035642.17	ENST00000533193.5	537	3	0	-9	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGCTGTCTTACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	97214497	97199772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_97199949_97207337_97207463_97214252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023247	chr7	-	206	2	ISM	ENSMUSG00000035642.17	ENSMUST00000138060.3	467	3	33	14637	-8	-14604	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGACTGGAGAGAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	97228656	97214385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_97214508_97228572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023248	chr7	+	785	5	FSM	ENSMUSG00000025439.6	ENST00000532069.5	784	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCAGCTGCAAGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	97345951	97367685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_97346077_97354795_97354933_97363113_97363288_97365657_97365747_97367425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023249	chr7	+	1270	6	ISM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	8953	0	8842	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	97354793	97368086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023250	chr7	+	521	2	ISM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	127	57234	127	-57234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTACTTTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	97437874	97503856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97438182_97503642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023251	chr7	+	513	3	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	3	46802	3	-46306	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGTGTTAGTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	97492155	97514784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97492349_97503642_97503857_97514678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023252	chr7	+	465	3	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	11488	46170	11488	-45674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAAGATTGTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	97503640	97515416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97503857_97514678_97514780_97515268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023253	chr7	+	276	3	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	23110	28824	23110	-28328	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGCTCCACGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	97515262	97532762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97515417_97520781_97520820_97532678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023254	chr7	+	251	2	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	40525	25949	40525	-25453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCTAAAATGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	97532677	97535637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97532796_97535504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023255	chr7	+	579	5	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	51018	7544	51018	-7048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTTCTCATCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	97543170	97554042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023256	chr7	+	486	4	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	57438	4457	57438	-3961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCTAAAGAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	97549590	97557129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97549665_97552843_97552944_97553844_97554042_97557014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023257	chr7	+	866	4	ISM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	60692	647	60692	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTTTTTCTTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97552844	97560939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97552944_97553844_97554042_97557014_97557153_97560507
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023258	chr7	+	593	3	ISM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	61766	965	61755	-467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAACTGATGAGCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	97553907	97560623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97554042_97557014_97557153_97560302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023259	chr7	+	933	1	ISM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	68514	0	68503	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97560655	97561588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_97560700_97561600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023260	chr7	-	878	4	ISM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	35757	0	35757	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCACGCCCCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	97775557	97772742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023261	chr7	-	241	3	ISM	ENSMUSG00000030760.15	ENST00000533873.1	740	10	85446	-1	85446	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTAGTTCTGCCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	97873223	97866007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_97866098_97867262_97867309_97873118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023262	chr7	-	258	3	ISM	ENSMUSG00000030760.15	ENST00000533873.1	740	10	82957	1254	82957	-1254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATGTTGTAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	97875712	97867262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_97867309_97873118_97873224_97875605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023263	chr7	-	246	3	ISM	ENSMUSG00000030760.15	ENST00000533873.1	740	10	65448	7137	65448	-7137	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCTTATCTTCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	97893221	97873145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_97873224_97875605_97875708_97893155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023264	chr7	-	235	4	ISM	ENSMUSG00000030760.15	ENST00000533873.1	740	10	50002	27145	50002	-27145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTTGGGTTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	97908667	97893153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_97893215_97901096_97901133_97906902_97906985_97908611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023265	chr7	-	300	4	ISM	ENSMUSG00000030760.15	ENST00000533873.1	740	10	3	40894	3	-40894	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTATAATTTATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	97958666	97906902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_97906985_97908611_97908665_97910793_97910847_97958554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023266	chr7	-	2596	2	FSM	ENSMUSG00000049580.13	ENSMUST00000167405.3	2597	2	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATTTGCTGACAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	98010497	97999873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_98002338_98010365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023267	chr7	-	2299	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGACTCTGTTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	98010484	98000074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_98002338_98010448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023268	chr7	-	2267	1	NIC	ENSMUSG00000049580.13	novel	2760	4	NA	NA	6945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGACTCTGTTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	98002341	98000074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_98000100_98002300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023269	chr7	+	2254	5	FSM	ENSMUSG00000030753.16	ENST00000551685.2	2276	5	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAGATTTTAAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	98352619	98366106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362107_98364188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023270	chr7	+	315	2	FSM	ENSMUSG00000030753.16	ENST00000447914.2	2028	2	24	1689	24	-1687	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCAGGCGCTCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	98359356	98364419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_98359441_98364188
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023271	chr7	+	251	1	ISM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	13549	1160	6526	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATTTTAAAAATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	98365858	98366109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_98365900_98366100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023272	chr7	+	474	1	ISM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	14486	0	7463	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	98366795	98367269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_98366800_98367300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023273	chr7	-	1739	1	ISM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	254382	0	254382	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGAGAGTTAAAAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	98535966	98534227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98534200_98536000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023274	chr7	-	1746	2	ISM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	234555	1921	234555	-1921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTGCAACGTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	98555793	98536148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98537800_98555698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023275	chr7	-	981	1	ISM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	28081	0	27971	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	98803845	98802864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98802900_98803800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023276	chr7	-	1414	4	ISM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	23683	211	23573	-211	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCTCTTCACAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	98808243	98803075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023277	chr7	+	3226	3	FSM	ENSMUSG00000055407.15	ENSMUST00000122101.8	3233	3	11	-4	11	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCTGGCTCTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	98916664	98986347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_98918521_98964895_98965110_98985191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023278	chr7	-	869	1	ISM	ENSMUSG00000070436.13	ENSMUST00000169437.9	2274	5	6870	0	5626	0	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAGCCTGTGATTTATG	NA	NA	NA	NA	NA	NA	NA	NA	98995451	98994582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98994600_98995500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023279	chr7	-	1836	4	ISM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	3642	194	2398	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTATGTTGGGCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	98998679	98994795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023280	chr7	-	833	2	ISM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	5947	438	4703	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATATTTATGGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	98996374	98995039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98995630_98996131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023281	chr7	-	949	3	ISM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	0	1876	0	-347	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGTCTTGCTAGACGGT	NA	NA	NA	NA	NA	NA	NA	NA	99002446	98996471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98996572_98998009_98998672_99002259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023282	chr7	-	787	3	ISM	ENSMUSG00000070436.13	ENST00000530284.5	1039	4	11	349	11	-349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGACGTCTTGCTAGACG	NA	NA	NA	NA	NA	NA	NA	NA	99001066	98996473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98996572_98998009_98998663_99001030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023283	chr7	-	299	2	ISM	ENSMUSG00000070436.13	ENSMUST00000208119.2	2173	6	85	3924	85	-2396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCGACCACACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	99002236	98998520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_98998672_99002088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023284	chr7	-	1901	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	12	-5	12	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATGCAATTATTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	99132933	99127097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023285	chr7	-	1065	1	Genic_Genomic	ENSMUSG00000030744.14	novel	NA	NA	NA	NA	3744	2	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTATGCAATTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	99128165	99127100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_99127100_99128200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023286	chr7	-	1169	2	NNC	ENSMUSG00000030744.14	novel	673	5	NA	NA	3278	-19	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAACCTTCATCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	99128631	99127129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_99128148_99128480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023287	chr7	-	1185	2	NNC	ENSMUSG00000030744.14	novel	673	5	NA	NA	3249	-43	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGGTATTATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	99128660	99127153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_99128148_99128469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023288	chr7	-	242	1	ISM	ENSMUSG00000030737.18	ENSMUST00000032985.11	4381	14	51591	1704	36060	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGAGATGAGATTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	99308956	99308714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99308700_99309000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023289	chr7	-	607	3	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	34218	1376	34218	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAACCTGGAACCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	99310798	99308971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99309384_99310310_99310432_99310724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023290	chr7	-	1068	7	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	24764	1690	24764	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCACTGTAAAGAGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	99320252	99309285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023291	chr7	-	1040	6	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	12922	3129	12922	-1439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTGCTTGCCCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	99332094	99310724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023292	chr7	-	1149	6	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	9687	6388	9687	-4698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCAACCTCCCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	99335329	99313983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023293	chr7	-	330	2	ISM	ENSMUSG00000030737.18	ENST00000454962.6	2068	10	17587	23186	6809	-22615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCACCCTCCATGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	99338207	99331900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99332093_99338069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023294	chr7	-	200	2	ISM	ENSMUSG00000030737.18	ENST00000532236.5	2143	12	41	29096	41	-28783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGACTGGGCAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	99355753	99338068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99338233_99355717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023295	chr7	-	2456	2	ISM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	14141	-4	14063	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCCTTTCAGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	99494043	99486771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99489091_99493906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023296	chr7	-	2321	1	Genic_Genomic	ENSMUSG00000035227.8	novel	NA	NA	NA	NA	19011	1	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTTTTCCTTTCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	99489095	99486774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_99486800_99489100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023297	chr7	-	986	1	ISM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	38469	0	38331	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	99732303	99731317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99731300_99732300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023298	chr7	-	1129	4	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	27936	-364	27936	364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCAGAAATGACTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99742698	99732235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023299	chr7	+	580	2	FSM	ENSMUSG00000030725.5	ENSMUST00000032967.4	1663	2	136	947	136	-947	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATCCTTGGGATGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	99808619	99809625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_99808955_99809380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023300	chr7	+	319	1	Genic_Genomic	ENSMUSG00000030725.5	novel	NA	NA	NA	NA	1772	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTCGCCTCAATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	99810255	99810574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_99810300_99810600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023301	chr7	-	1096	1	Genic_Genomic	ENSMUSG00000030718.10	novel	NA	NA	NA	NA	44476	1	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGAGGAGCTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	99977038	99975942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_99975900_99977000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023302	chr7	+	1372	7	FSM	ENSMUSG00000047248.21	ENST00000680645.1	1372	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTAGCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100021463	100045056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044512_100044961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023303	chr7	+	1131	2	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	5445	1789	5445	-1789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGCACACTGGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100147988	100149438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_100148124_100148442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023304	chr7	+	1001	1	ISM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	7683	0	7683	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCAGGGTTTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100150226	100151227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_100150200_100151200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023305	chr7	+	1283	1	Genic_Genomic	ENSMUSG00000044881.8	novel	NA	NA	NA	NA	1856	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTAGTCTGCTTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	100188294	100189577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_100188300_100189600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023306	chr7	-	1656	1	FSM	ENSMUSG00000030706.18	ENSMUST00000064334.3	1865	1	215	-6	215	1	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTGCTTGAGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	100196612	100194956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_100195000_100196600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023307	chr7	-	1698	2	ISM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	32468	2029	-3014	929	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTCCTGTGACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	100199841	100196986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100198590_100199746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023308	chr7	+	497	1	FSM	ENSMUSG00000081359.2	ENSMUST00000119872.2	353	1	-37	-107	-37	107	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTATTGACAGCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	100229436	100229933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_100229400_100229900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023309	chr7	-	363	3	FSM	ENSMUSG00000030706.18	ENST00000540547.1	360	3	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAATGACCGCAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	100257503	100256526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_100256565_100257097_100257252_100257332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023310	chr7	-	196	2	NNC	ENSMUSG00000030706.18	novel	360	3	NA	NA	250	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAATGACCGCAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	100257253	100256527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_100256568_100257097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023311	chr7	+	707	2	ISM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	-43	14657	-43	-14657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTGCCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	100256853	100275818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_100257501_100275758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023312	chr7	+	312	2	NNC	ENSMUSG00000030704.15	novel	3214	8	NA	NA	200	-32988	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCAGAGCGGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	100257096	100257487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_100257262_100257340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023313	chr7	+	798	3	ISM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	26953	1379	26953	-1379	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGAGGGCAGAACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	100283849	100289096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_100283946_100285901_100285969_100288461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023314	chr7	+	1783	1	Genic_Genomic	ENSMUSG00000030704.15	novel	NA	NA	NA	NA	31797	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTTCACATTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	100288693	100290476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_100288700_100290500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023315	chr7	-	254	2	ISM	ENSMUSG00000030701.18	ENST00000543085.5	470	5	11138	0	11138	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGGATGTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	100294881	100294127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100294277_100294776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023316	chr7	-	151	1	NIC	ENSMUSG00000030701.18	novel	2793	6	NA	NA	11741	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGGATGTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	100294278	100294127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_100294100_100294300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023317	chr7	-	247	3	ISM	ENSMUSG00000030701.18	ENST00000543085.5	470	5	2107	646	2107	-646	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCCTAGCATGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	100303912	100294773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100294877_100302860_100302901_100303808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023318	chr7	-	156	2	NNC	ENSMUSG00000030701.18	novel	470	5	NA	NA	2160	-686	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGTCCGCAGCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	100303859	100294813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_100294919_100303808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023319	chr7	-	166	2	ISM	ENSMUSG00000030701.18	ENST00000543085.5	470	5	15	9681	15	-9681	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCAGATTCAGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100306004	100303808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100303912_100305941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023320	chr7	-	761	1	ISM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	16839	0	16839	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGAGCTTTTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100495814	100495053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100495100_100495800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023321	chr7	-	480	1	ISM	ENSMUSG00000032875.9	ENSMUST00000107032.3	10190	21	59499	2377	22082	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTCCCCCGGGCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	100521815	100521335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100521300_100521800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023322	chr7	-	477	2	ISM	ENSMUSG00000032875.9	ENSMUST00000209041.2	4516	21	18005	1258	18005	-1258	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGCCCAGGACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	100525892	100522599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100522804_100525619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023323	chr7	-	471	2	ISM	ENSMUSG00000032875.9	ENST00000263674.4	7779	21	3085	18330	3085	-18324	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCGTATGTGGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100578206	100539665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100539706_100577775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023324	chr7	-	632	1	ISM	ENSMUSG00000048779.6	ENSMUST00000060174.6	1946	3	25592	538	3398	5	mono-exon	FALSE	NA	NA	NA	NA	NA	1074	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGCCCCAGAGGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	100588006	100587374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_100587400_100588000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023325	chr7	-	1187	2	FSM	ENSMUSG00000048779.6	ENST00000680955.1	1177	2	-8	-2	-8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAGGCCCCAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	100591412	100587377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_100588392_100591239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023326	chr7	-	1170	2	NNC	ENSMUSG00000048779.6	novel	1177	2	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGAGGCCCCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100591400	100587378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_100588392_100591243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023327	chr7	-	569	2	FSM	ENSMUSG00000048779.6	ENST00000349767.6	959	2	-4	394	-4	-394	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACGGTCATCGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	100614509	100587773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_100588324_100614490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023328	chr7	+	839	4	ISM	ENSMUSG00000030691.16	ENST00000409263.5	902	5	187	0	187	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTTTCCTCAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100926030	100932102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_100926211_100927557_100927688_100927778_100927862_100931656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023329	chr7	+	500	1	ISM	ENSMUSG00000030691.16	ENSMUST00000032931.9	4453	21	175168	5	7264	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCAAGTGTCCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	100933107	100933607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_100933100_100933600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023330	chr7	-	448	2	FSM	ENSMUSG00000110239.2	ENSMUST00000209980.2	468	2	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACACTTGCATAAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	100997171	100996615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_100996946_100997053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023331	chr7	+	321	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	3	28216	3	-27229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGCTGCCACAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	101100504	101133808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101100676_101130577_101130668_101133748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023332	chr7	+	295	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	30073	9406	30073	-8419	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCCTGCCTTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	101130574	101152618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101130668_101133748_101133838_101152505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023333	chr7	+	278	4	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	33274	8782	33274	-7795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCAGAAGTGGGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	101133775	101153242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101133838_101152505_101152618_101153030_101153071_101153178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023334	chr7	+	251	2	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	53083	8069	53083	-7082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCGACTCGTGGTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	101153584	101153955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101153658_101153777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023335	chr7	+	326	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	53274	6866	53274	-5879	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCAGCCACCTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	101153775	101155158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101153956_101154163_101154277_101155125
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023336	chr7	+	316	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	53661	5598	53661	-4611	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTGGCCCTTCCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	101154162	101156426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101154277_101155125_101155204_101156302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023337	chr7	+	245	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	54651	5070	54651	-4083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGCCCCGCACTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	101155152	101156954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101155204_101156302_101156426_101156883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023338	chr7	+	250	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	55849	4707	55849	-3720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTCCAACTACCTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	101156350	101157317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101156426_101156883_101156955_101157213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023339	chr7	+	260	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	56381	4311	56381	-3324	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCCTTCCAGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	101156882	101157713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101156955_101157213_101157337_101157648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023340	chr7	+	260	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	56711	4078	56711	-3091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGCCATCCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	101157212	101157946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101157337_101157648_101157737_101157898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023341	chr7	+	297	4	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	57396	2439	57396	-1452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAGACAAAGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	101157897	101159585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101157947_101158923_101158999_101159141_101159242_101159512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023342	chr7	+	250	3	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	58643	1849	58643	-862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCCCGTGGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	101159144	101160175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101159242_101159512_101159626_101160135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023343	chr7	+	318	2	ISM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	59818	1152	59818	-165	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCCCTCTAGGGACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	101160319	101160872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101160428_101160662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023344	chr7	+	267	1	ISM	ENSMUSG00000110195.2	ENSMUST00000163751.10	4218	31	90864	6	61260	4	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCACAGGAGGTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	101161761	101162028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101161800_101162000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023345	chr7	+	1680	4	ISM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	122345	-1076	122326	1074	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGCATTCTACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	101435305	101438091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101435381_101435493_101435614_101435852_101435958_101436711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023346	chr7	+	289	1	ISM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	123889	2358	123749	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCCACCTTGCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	101436728	101437017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101436700_101437000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023347	chr7	+	1389	1	ISM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	125147	0	125007	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTGAGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	101437986	101439375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101438000_101439400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023348	chr7	-	625	4	NNC	ENSMUSG00000032725.11	novel	629	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATGACATCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	101493047	101489471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_101489602_101489797_101489934_101490018_101490205_101492874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023349	chr7	-	625	4	NNC	ENSMUSG00000032725.11	novel	629	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATGACATCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	101493046	101489471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_101489606_101489797_101489925_101490012_101490205_101492874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023350	chr7	-	634	4	NNC	ENSMUSG00000032725.11	novel	629	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATGACATCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	101493047	101489471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_101489606_101489797_101489934_101490018_101490205_101492869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023351	chr7	-	630	4	FSM	ENSMUSG00000032725.11	ENST00000449475.6	629	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATGACATCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	101493048	101489471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_101489606_101489797_101489934_101490018_101490205_101492874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023352	chr7	-	622	4	NNC	ENSMUSG00000032725.11	novel	629	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATGACATCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	101493045	101489471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_101489606_101489797_101489934_101490018_101490200_101492874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023353	chr7	-	630	4	NNC	ENSMUSG00000032725.11	novel	629	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATGACATCTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	101493048	101489471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_101489606_101489797_101489934_101490018_101490200_101492869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023354	chr7	+	2860	5	FSM	ENSMUSG00000030649.19	ENST00000542531.5	751	5	-4	-2105	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGCTATCCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	101546934	101550847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023355	chr7	+	608	1	ISM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	4825	0	3447	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTCCAGACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	101550448	101551056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101550400_101551100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023356	chr7	+	1122	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGTCCTGCCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	101555109	101561112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023357	chr7	+	1095	5	NNC	ENSMUSG00000030842.13	novel	1119	5	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	101555128	101561110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_101555248_101558870_101559017_101559235_101559308_101559626_101559754_101560479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023358	chr7	-	289	1	Genic_Genomic	ENSMUSG00000064307.14	novel	NA	NA	NA	NA	2550	4	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACAGTGAAGGCAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	101562426	101562137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_101562100_101562400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023359	chr7	-	773	4	FSM	ENSMUSG00000064307.14	ENST00000538478.5	728	4	4	-49	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCACAGTGAAGGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	101569980	101562138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_101562416_101562637_101562791_101564768_101564975_101569843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023360	chr7	-	454	3	ISM	ENSMUSG00000064307.14	ENSMUST00000106965.8	743	5	5561	-9	131	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTACCTTGTTAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	101564845	101562187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101562416_101562641_101562791_101564768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023361	chr7	-	1274	1	ISM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	44748	0	40066	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTTTTTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	101669617	101668343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101668300_101669600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023362	chr7	-	1726	5	FSM	ENSMUSG00000070426.13	ENST00000533380.5	846	5	9	-889	9	-75	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCCATTTGAAGGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	101714354	101668433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101688756_101688899_101714272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023363	chr7	-	832	5	NNC	ENSMUSG00000070426.13	novel	846	5	NA	NA	13	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGGCCTAACCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	101714350	101669321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_101669700_101672518_101672621_101673221_101673354_101688756_101688899_101714272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023364	chr7	-	489	1	ISM	ENSMUSG00000063550.9	ENSMUST00000210682.2	6694	33	90286	4	89977	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCTGGTGGTATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	101769097	101768608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101768600_101769100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023365	chr7	-	570	2	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	89280	814	88995	-814	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101770079	101769422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101769879_101769965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023366	chr7	-	558	4	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	81133	5728	80848	-5728	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCCTACACATTGACA	NA	NA	NA	NA	NA	NA	NA	NA	101778226	101774336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101774532_101775656_101775800_101776970_101777115_101778150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023367	chr7	-	512	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	80089	8400	79804	6401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGGGCTCTCAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	101779270	101777008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101777115_101778150_101778309_101779022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023368	chr7	-	555	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	77292	9641	77007	5160	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCACCATGCAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	101782067	101778249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101778309_101779022_101779290_101781838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023369	chr7	-	768	3	ISM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	75157	10575	74872	4226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGTAGAAGAGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101784202	101779183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101779290_101781838_101782069_101783770
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023370	chr7	-	572	2	ISM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	71260	95	70985	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATCGTGAGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	101788089	101783779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101784201_101787938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023371	chr7	-	471	3	ISM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	64453	4253	64178	-4253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTATAAATGTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	101794896	101787937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101788093_101788674_101788858_101794763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023372	chr7	-	499	4	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	56290	1870	56007	-1870	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTACTTAATCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	101803067	101796404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101796585_101801524_101801664_101802342_101802457_101803001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023373	chr7	-	512	4	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	40706	11733	40423	-11733	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAAAGGTGAGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	101818651	101806267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101806376_101809747_101809936_101812895_101813030_101818569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023374	chr7	-	503	5	ISM	ENSMUSG00000063550.9	ENSMUST00000211022.2	3132	20	26628	18374	26345	-18374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAAGAGGTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	101832729	101812908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023375	chr7	+	596	3	ISM	ENSMUSG00000030990.19	ENST00000464261.5	749	5	20	794	20	-794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGACTTTCTAATAGG	NA	NA	NA	NA	NA	NA	NA	NA	101875495	101885840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101875653_101885300_101885554_101885654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023376	chr7	+	1555	4	FSM	ENSMUSG00000111339.2	ENST00000490830.5	681	4	8	-882	8	882	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAGGGGGAAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	101885306	101887623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_101885554_101885654_101885838_101886328_101886438_101886607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023377	chr7	+	417	3	ISM	ENSMUSG00000030990.19	ENST00000493547.6	1089	5	10179	242	6449	108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGATGCTGGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	101885654	101886742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_101885828_101886328_101886438_101886607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023378	chr7	+	1083	1	Genic_Genomic	ENSMUSG00000030990.19_ENSMUSG00000111339.2	novel	NA	NA	NA	NA	1397	4	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTATGTTGCTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	101886695	101887778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_101886700_101887800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023379	chr7	-	683	1	ISM	ENSMUSG00000073982.12	ENSMUST00000106923.2	1321	3	10283	0	10283	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCTCCCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	101889012	101888329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_101888300_101889000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023380	chr7	-	559	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	5	705	5	-705	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGGGCCAGGCACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	101899325	101889034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_101889520_101899251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023381	chr7	-	222	1	FSM	ENSMUSG00000044814.7	ENSMUST00000061482.6	1130	1	759	149	759	7	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCACCCCAAGACAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	102126350	102126128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_102126100_102126400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023382	chr7	-	2929	2	FSM	ENSMUSG00000042909.5	ENSMUST00000216612.3	2929	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	103832599	103826804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_103829637_103832502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023383	chr7	+	645	4	FSM	ENSMUSG00000030897.6	ENST00000533426.5	642	4	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGTAGGGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105054094	105056369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_105054198_105054376_105054484_105055261_105055335_105056007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023384	chr7	+	642	4	NNC	ENSMUSG00000030897.6	novel	642	4	NA	NA	6	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGTAGGGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105054101	105056369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_105054198_105054376_105054488_105055261_105055335_105056007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023385	chr7	+	619	4	NNC	ENSMUSG00000030897.6	novel	642	4	NA	NA	22	7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTAGGGACAGGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	105054117	105056374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_105054190_105054376_105054484_105055261_105055335_105056007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023386	chr7	+	543	3	NNC	ENSMUSG00000030897.6	novel	642	4	NA	NA	276	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACTGGTAGGGACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105054371	105056369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_105054468_105055249_105055335_105056007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023387	chr7	+	1686	4	FSM	ENSMUSG00000030898.16	ENST00000532715.5	1712	4	32	-6	32	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCCCTCCTGCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	105075172	105085164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_105075383_105083201_105083452_105083726_105083885_105084096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023388	chr7	+	381	2	ISM	ENSMUSG00000030898.16	ENST00000334619.7	1876	5	26	2116	26	-2116	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGAGACAAACACTATC	NA	NA	NA	NA	NA	NA	NA	NA	105075254	105083042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105075383_105082789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023389	chr7	+	507	2	ISM	ENSMUSG00000030898.16	ENST00000334619.7	1876	5	7558	1705	7558	-1705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAAGTCCCATTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	105082786	105083453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105083042_105083201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023390	chr7	+	1067	1	NIC	ENSMUSG00000030898.16	novel	2573	5	NA	NA	8867	4	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTCCCTCCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105084095	105085162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_105084100_105085200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023391	chr7	-	1665	2	FSM	ENSMUSG00000037060.4	ENSMUST00000047040.4	1662	2	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGATCTTGTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105131507	105129286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_105130427_105130982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023392	chr7	-	1536	2	NNC	ENSMUSG00000037060.4	novel	1662	2	NA	NA	122	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTAGATCTTGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	105131385	105129287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_105130421_105130982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023393	chr7	-	1590	2	NNC	ENSMUSG00000037060.4	novel	1662	2	NA	NA	71	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTAGATCTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	105131436	105129288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_105130421_105130978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023394	chr7	-	1606	2	NNC	ENSMUSG00000037060.4	novel	1662	2	NA	NA	58	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTAGATCTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	105131449	105129288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_105130424_105130978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023395	chr7	-	1653	2	NNC	ENSMUSG00000037060.4	novel	1662	2	NA	NA	7	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTAGATCTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	105131500	105129288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_105130424_105130982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023396	chr7	-	1667	2	NNC	ENSMUSG00000037060.4	novel	1662	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTAGATCTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	105131507	105129288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_105130427_105130978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023397	chr7	+	1563	2	Genic_Genomic	ENSMUSG00000109735.2	novel	1316	1	NA	NA	-1845	-1041	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATCTGGGCTGGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	105129288	105131408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_105130433_105130989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023398	chr7	+	1652	2	Genic_Genomic	ENSMUSG00000109735.2	novel	1316	1	NA	NA	-1845	-947	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAGGCCGAGCAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	105129288	105131502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_105130433_105130994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023399	chr7	+	1589	2	Genic_Genomic	ENSMUSG00000109735.2	novel	1316	1	NA	NA	-1845	-1013	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTCCCCTAGTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	105129288	105131436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_105130433_105130991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023400	chr7	+	304	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	310	3032	310	-3032	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGCCCATCAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	105203876	105204564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105204045_105204428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023401	chr7	+	186	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	1535	1797	1535	-1797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCTTGATCAACTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	105205101	105205799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105205202_105205713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023402	chr7	+	185	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	2214	1392	2214	-1392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATAGAGGGCTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	105205780	105206204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105205886_105206124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023403	chr7	+	185	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	2558	932	2558	-932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGCCCAGTGCTACAACCT	NA	NA	NA	NA	NA	NA	NA	NA	105206124	105206664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105206202_105206556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023404	chr7	+	257	2	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	2987	658	2987	-658	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAAGCTGGAAGCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	105206553	105206938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105206703_105206830
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023405	chr7	+	207	1	ISM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	3823	0	3823	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTCCTATTTCTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	105207389	105207596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105207400_105207600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023406	chr7	-	641	2	ISM	ENSMUSG00000037032.17	ENSMUST00000188368.7	1970	14	9572	0	9572	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105208412	105207690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105208258_105208338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023407	chr7	-	799	2	ISM	ENSMUSG00000037032.17	ENSMUST00000081165.14	2530	13	82	9108	82	-8776	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAAGAGTCCCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	105223527	105216800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105216961_105222888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023408	chr7	-	706	2	ISM	ENSMUSG00000037032.17	ENSMUST00000191601.7	2690	15	30	15341	30	-15007	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTCACAGACGGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	105230455	105223031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105223624_105230341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023409	chr7	-	351	1	ISM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	5863	0	5763	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTTATTGTATTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	105283760	105283409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105283400_105283800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023410	chr7	-	1329	6	ISM	ENSMUSG00000030881.16	ENST00000423813.6	1404	7	1307	-93	1209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAATAGTGTTGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	105288314	105285044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023411	chr7	-	360	3	ISM	ENSMUSG00000030881.16	ENST00000525235.1	851	7	859	1045	848	-1045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATTCAAGTGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	105288675	105287415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105287535_105288215_105288313_105288531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023412	chr7	+	1621	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	13	1639	13	149	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCAGCTCTCTACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	105289275	105291205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_105289830_105289968_105290065_105290234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023413	chr7	+	698	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCTTTCTTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	105289653	105291053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023414	chr7	+	399	3	ISM	ENSMUSG00000089847.9	ENSMUST00000210350.2	529	4	269	0	230	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCTTGTCTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	105290026	105291056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105290065_105290234_105290368_105290828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023415	chr7	+	1033	1	ISM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	2549	0	2015	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTTCCTTTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	105291811	105292844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105291800_105292800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023416	chr7	-	729	1	Genic_Genomic	ENSMUSG00000030888.15	novel	NA	NA	NA	NA	4324	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCATGTTTGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	105381664	105380935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_105380900_105381700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023417	chr7	-	876	3	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	3766	49	3162	-49	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTAGTCCAAGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	105382826	105381659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105382351_105382558_105382656_105382738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023418	chr7	-	800	2	ISM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	2327	1619	1723	-1619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCAAAGATCTCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	105384265	105383229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105383661_105383896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023419	chr7	-	815	2	ISM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	19	2977	19	-2303	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTTGACCAAACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	105385969	105383913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105384264_105385504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023420	chr7	+	378	3	ISM	ENSMUSG00000030890.17	ENST00000528995.5	1483	10	2	2332	2	-2301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAAGACCAGGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	105386306	105389793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105386445_105389383_105389550_105389719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023421	chr7	+	1140	8	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	4269	-3	3896	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTGGGGACAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105390200	105392132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023422	chr7	+	414	1	NIC	ENSMUSG00000030890.17	novel	1795	13	NA	NA	5413	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGTGTGGGGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	105391717	105392131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_105391700_105392100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023423	chr7	-	1532	1	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	5892	1	5386	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTGTATTGTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	105395550	105394018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105394000_105395600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023424	chr7	-	1823	3	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	4683	431	4177	-431	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACATGCACAAAATACTG	NA	NA	NA	NA	NA	NA	NA	NA	105396759	105394448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105395980_105396149_105396276_105396593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023425	chr7	-	614	5	ISM	ENSMUSG00000030894.6	ENST00000644810.1	1563	9	2303	1124	2303	-1124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATCTACCACCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	105398633	105396720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023426	chr7	-	642	4	ISM	ENSMUSG00000030894.6	ENST00000642892.1	1886	12	2090	2491	1741	-2491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTCTACCATAAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	105399195	105398087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105398279_105398431_105398631_105398743_105398920_105399119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023427	chr7	-	1099	1	ISM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	6795	0	6692	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTCCTGTGATGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	105453511	105452412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_105452400_105453500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023428	chr7	-	1389	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	52	5859	-51	615	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCCTATTTCAACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	105460254	105458271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_105459352_105459656_105459726_105460014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023429	chr7	+	398	2	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	73	5126	73	-5126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATTTAAGCAGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	108533696	108537032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_108534015_108536952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023430	chr7	+	500	4	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	180	4405	180	-4405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCCTGGGCACGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	108533803	108537753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023431	chr7	+	387	4	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	3328	2665	3328	-2665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCTGCTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	108536951	108539493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_108537024_108537242_108537323_108537615_108537754_108539396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023432	chr7	+	412	4	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	3654	2171	3654	-2171	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATTGGGGAGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	108537277	108539987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_108537323_108537615_108537754_108539396_108539489_108539850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023433	chr7	+	350	3	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	5770	1940	5770	-1940	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCGTGGCTGCACCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	108539393	108540218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_108539489_108539850_108539988_108540100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023434	chr7	+	559	3	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	6225	1185	6225	-1185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACTGTGGGGAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	108539848	108540973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_108539988_108540100_108540215_108540667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023435	chr7	+	321	2	ISM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	6467	1294	6467	-1294	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAATAAACATAGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	108540090	108540864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_108540215_108540667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023436	chr7	+	347	1	Genic_Genomic	ENSMUSG00000031029.7	novel	NA	NA	NA	NA	8191	3	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCAGAGAGTACTATGC	NA	NA	NA	NA	NA	NA	NA	NA	108541814	108542161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_108541800_108542200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023437	chr7	-	448	1	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	44398	3	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCTTGGGAAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	108638095	108637647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_108637600_108638100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023438	chr7	-	858	4	FSM	ENSMUSG00000048330.15	ENST00000425599.6	864	4	8	-2	8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCTGCTTGGGAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	108682485	108637648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_108638091_108655950_108656024_108656989_108657217_108682369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023439	chr7	-	641	3	ISM	ENSMUSG00000036111.9	ENSMUST00000208136.2	772	4	26844	-58	26844	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTACAGTCTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	108742875	108737881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_108738184_108739788_108739915_108742662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023440	chr7	-	528	3	ISM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	82	1907	82	-1849	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGCCAGAGCCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	108774332	108739788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_108739915_108742662_108742877_108774144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023441	chr7	+	1162	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAATCTGGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	109118353	109121578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023442	chr7	+	1095	5	NNC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	19	-36	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGTAAATAAATAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	109118372	109121538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_109118430_109118799_109118856_109119124_109119201_109119674_109119850_109120807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023443	chr7	+	1075	4	NNC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	437	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109118790	109121574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_109118856_109119124_109119201_109119682_109119850_109120807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023444	chr7	+	1087	4	NNC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	437	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109118790	109121574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_109118860_109119124_109119201_109119674_109119850_109120807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023445	chr7	+	1030	3	ISM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	759	0	759	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109119112	109121574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_109119201_109119674_109119850_109120807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023446	chr7	+	1024	3	NNC	ENSMUSG00000046364.15	novel	1158	5	NA	NA	769	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	109119122	109121574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_109119201_109119674_109119854_109120807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023447	chr7	-	401	1	Genic_Genomic	ENSMUSG00000031021.14	novel	NA	NA	NA	NA	16052	7	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTCTCCAGCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	109335434	109335033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_109335000_109335400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023448	chr7	-	557	3	ISM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	6860	846	6860	-844	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTAATATATTAATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	109344626	109335886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109336199_109342753_109342889_109344516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023449	chr7	-	516	4	ISM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	9	7733	9	-7731	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCGATGATGACGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	109351477	109342773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109342889_109344516_109344626_109349219_109349312_109351277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023450	chr7	-	156	2	ISM	ENSMUSG00000034825.15	ENST00000531090.5	691	5	19717	-1	19671	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTCAGGGCATTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	109361081	109360846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109360949_109361027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023451	chr7	-	150	2	ISM	ENSMUSG00000034825.15	ENST00000531090.5	691	5	15052	3825	15006	-3825	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGCCATTTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	109365746	109364672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109364756_109365679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023452	chr7	-	244	1	ISM	ENSMUSG00000035901.15	ENSMUST00000106722.2	4862	22	66355	22	66151	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAACACCTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	109493252	109493008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109493000_109493300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023453	chr7	-	315	2	ISM	ENSMUSG00000035901.15	ENST00000679568.1	4788	23	63924	809	63895	-185	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACCCAGAAAGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	109495508	109493817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109494023_109495398
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023454	chr7	-	248	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	63213	1775	63213	-1775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATAGGGTGGGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	109496190	109495407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109495619_109496153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023455	chr7	-	207	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	62210	2521	62210	-2521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGGTCTAGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	109497193	109496153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109496278_109497110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023456	chr7	-	226	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	61032	4159	61032	-4159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCGCACTCCGCCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	109498371	109497791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109497897_109498250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023457	chr7	-	230	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	60327	4653	60327	-4653	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTCAGGAATGAGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	109499076	109498285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109498370_109498930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023458	chr7	-	235	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	54896	6652	54896	-6652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCTTTACAACCATCCGT	NA	NA	NA	NA	NA	NA	NA	NA	109504507	109500284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109500389_109504376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023459	chr7	-	218	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	54413	10743	54413	-10743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCCAGGCTCCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	109504990	109504375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109504506_109504902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023460	chr7	-	288	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	45342	17488	45342	-17488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGGTCTAGCCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	109514061	109511120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109511275_109513927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023461	chr7	-	226	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	43892	20295	43892	-20295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTGGGTACTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	109515511	109513927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109514060_109515417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023462	chr7	-	233	2	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	42665	21793	42665	-21793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAGGTAAGACGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	109516738	109515425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109515512_109516591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023463	chr7	-	1099	5	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	33193	22957	33193	-22957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAACCGTAGAGATTCC	NA	NA	NA	NA	NA	NA	NA	NA	109526210	109516589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023464	chr7	-	1371	4	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	25924	24847	25924	-24847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGATAAAGTAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	109533479	109518479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109518685_109520400_109520719_109526033_109526222_109532819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023465	chr7	-	1027	4	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	25392	27017	25392	-27017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGGAGTTTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	109534011	109520649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109520719_109526033_109526222_109532819_109533478_109533899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023466	chr7	-	1029	4	ISM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	24642	32401	24642	-32401	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAAGAGAAGTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	109534761	109526033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109526222_109532819_109533478_109533899_109534010_109534688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023467	chr7	-	1445	1	Genic_Genomic	ENSMUSG00000047554.15	novel	NA	NA	NA	NA	12629	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAATTTTCCCACCAAT	NA	NA	NA	NA	NA	NA	NA	NA	109572837	109571392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_109571400_109572800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023468	chr7	-	1512	2	ISM	ENSMUSG00000047554.15	ENSMUST00000119929.8	2346	8	9526	275	9526	-94	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCAAAGCCTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	109575940	109572785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_109574159_109575801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023469	chr7	+	315	2	ISM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	13330	19514	-10455	-18019	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTACTTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	109630810	109636302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_109630974_109636150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023470	chr7	+	1050	1	FSM	ENSMUSG00000109904.2	ENSMUST00000210940.2	1751	1	702	-1	702	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGCCGACCCAAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	109719898	109720948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_109719900_109720900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023471	chr7	+	295	2	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	34132	19398	34132	-19398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGGGCCATAGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	109855049	109863315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_109855116_109863086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023472	chr7	+	301	2	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	42177	17590	42177	-17590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGCGAGGATCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	109863094	109865123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_109863315_109865042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023473	chr7	+	291	2	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	48188	10139	48188	-10139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTGAGAACCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	109869105	109872574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_109869289_109872466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023474	chr7	+	327	2	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	52923	4168	52923	-4168	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAGTTGGAGCGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	109873840	109878545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_109874009_109878386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023475	chr7	+	258	2	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	57466	2884	57466	-2884	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCCATCATGAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	109878383	109879829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_109878586_109879773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023476	chr7	+	255	1	ISM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	61541	0	61541	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACTGGTTACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	109882458	109882713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_109882500_109882700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023477	chr7	+	604	4	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	13496	10507	13496	-10287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTAGCTCTGCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	110390496	110400045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_110390555_110392846_110393067_110394885_110395016_110399849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023478	chr7	+	573	4	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	17886	8148	17886	-7928	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACTCACCCAACATGCG	NA	NA	NA	NA	NA	NA	NA	NA	110394886	110402404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_110395016_110399849_110400045_110401638_110401771_110402287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023479	chr7	+	581	4	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	24635	6366	24635	-6146	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGCAGGTGGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	110401635	110404186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_110401771_110402287_110402452_110402933_110403061_110404031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023480	chr7	+	1086	5	ISM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	27079	48	27079	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTTAAACCCCCACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	110404079	110410504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023481	chr7	+	573	1	ISM	ENSMUSG00000005686.18	ENSMUST00000170374.8	3489	15	42581	560	32993	14	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCTGTTGATGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	110409993	110410566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_110410000_110410600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023482	chr7	-	1598	1	ISM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	29329	0	22401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	110414335	110412737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_110412700_110414300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023483	chr7	-	1676	2	ISM	ENSMUSG00000030788.17	ENSMUST00000175981.8	2333	6	16165	140	16165	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGAAAGTCTTACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	110420571	110414492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_110416058_110420460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023484	chr7	-	2898	1	Genic_Genomic	ENSMUSG00000005610.18	novel	NA	NA	NA	NA	12377	7	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAACACAGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	110669847	110666949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_110666900_110669800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023485	chr7	-	3206	3	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	8765	-2043	8765	2043	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAGATGGATGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	110673459	110669095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_110671965_110673035_110673158_110673244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023486	chr7	+	585	1	ISM	ENSMUSG00000059263.10	ENST00000339865.9	5736	27	87412	284	87235	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	111710006	111710591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_111710000_111710600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023487	chr7	+	678	5	ISM	ENSMUSG00000038244.15	ENSMUST00000037991.12	3352	24	49306	29891	-47703	-29891	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCAGGCCAGTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	111919811	111923291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_111919941_111920552_111920644_111921722_111921871_111922684_111922885_111923181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023488	chr7	+	748	4	ISM	ENSMUSG00000038244.15	ENST00000527546.5	3187	20	75503	0	-21527	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTACGTAGTAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	111945987	111953533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_111946116_111948600_111948690_111950531_111950635_111953105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023489	chr7	+	297	2	ISM	ENSMUSG00000030770.16	ENSMUST00000106643.8	2222	14	365	45387	164	-44728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACCCCGAGGACACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	112027076	112143449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_112027308_112143383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023490	chr7	+	344	3	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	27826	21092	27826	-21092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATGCACGCTACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	112146733	112167085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_112146821_112159135_112159277_112166969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023491	chr7	+	281	3	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	40258	16046	40258	-16046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGTATGTCAACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	112159165	112172131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_112159277_112166969_112167086_112172077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023492	chr7	+	175	2	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	57233	9211	57233	-9211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGAGAGGTCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	112176140	112178966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_112176212_112178862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023493	chr7	+	1223	3	ISM	ENSMUSG00000030770.16	ENSMUST00000106640.2	1465	13	60008	-670	60008	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTCCTTTTTGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112178915	112188847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_112178965_112180156_112180230_112187746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023494	chr7	+	1106	1	NIC	ENSMUSG00000030770.16	novel	4454	13	NA	NA	68837	14	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTTTTTGCCTTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	112187744	112188850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_112187700_112188800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023495	chr7	+	275	1	ISM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	163712	0	71717	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCGCTGTTTCTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	112190624	112190899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_112190600_112190900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023496	chr7	-	357	1	ISM	ENSMUSG00000038187.15	ENSMUST00000117577.8	2384	8	31286	17	31286	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGACCAACTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	112915206	112914849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_112914800_112915200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023497	chr7	-	350	2	ISM	ENSMUSG00000038187.15	ENSMUST00000117577.8	2384	8	14430	14228	14430	-14211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGTTTGTTTATATT	NA	NA	NA	NA	NA	NA	NA	NA	112932062	112929060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_112929165_112931816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023498	chr7	-	2274	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGCTTGACGGCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	113717015	113646016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023499	chr7	-	185	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	38146	297	38146	-297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATGCTTAAAATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	113815800	113815090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113815173_113815697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023500	chr7	-	114	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	37068	968	37068	-968	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTTCACCAGGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	113816878	113815761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113815854_113816856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023501	chr7	-	142	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	35124	2073	35124	-2073	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAGAAGGTAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	113818822	113816866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113816947_113818760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023502	chr7	-	136	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	33008	4038	33008	-4038	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCAGCCTGCAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	113820938	113818831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113818907_113820877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023503	chr7	-	112	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	27705	11172	27705	-11172	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGCAACTAACTGCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	113826241	113825965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113826018_113826181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023504	chr7	-	162	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	22442	11549	22442	-11549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCAATTACTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	113831504	113826342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113826410_113831409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023505	chr7	-	145	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	21413	16694	21413	-16694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTCCCTCGCCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	113832533	113831487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113831531_113832431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023506	chr7	-	131	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	19696	17745	19696	-17745	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAATAACTGTTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	113834250	113832538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113832593_113834173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023507	chr7	-	131	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	17827	19444	17827	-19444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTGCAGTACAAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	113836119	113834237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113834271_113836021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023508	chr7	-	126	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	17392	21274	17392	-21274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGAGAAGATGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	113836554	113836067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113836168_113836528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023509	chr7	-	144	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	17100	21823	17100	-21823	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGACAAATACCGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	113836846	113836616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113836676_113836761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023510	chr7	-	143	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	16284	22011	16284	-22011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTAGCACTGGATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	113837662	113836804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113836870_113837584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023511	chr7	-	147	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	14004	22847	14004	-22847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGACCGCTTGGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	113839942	113837640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113837705_113839859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023512	chr7	-	186	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	9198	25108	9198	-25108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACACTGGTAACACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	113844748	113839901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113839998_113844658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023513	chr7	-	175	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	7890	29877	7890	-29877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATTTATAAGGTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	113846056	113844670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113844752_113845962
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023514	chr7	-	142	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	5843	31203	5843	-31203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCATTTATGATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	113848103	113845996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113846078_113848042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023515	chr7	-	136	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	4595	33354	4595	-33354	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAATTGCTGGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	113849351	113848147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113848213_113849280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023516	chr7	-	150	2	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	719	34690	719	-34690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTGAAGAAAGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	113853227	113849483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_113849511_113853104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023517	chr7	-	928	2	FSM	ENSMUSG00000091900.4	ENST00000422734.1	916	2	-1	-11	-1	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGATGAGAGCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	115683794	115682653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_115683220_115683432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023518	chr7	-	859	2	NNC	ENSMUSG00000091900.4	novel	916	2	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGACACCAAAGAAGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	115683744	115682664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_115683220_115683440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023519	chr7	-	159	1	ISM	ENSMUSG00000091900.4	ENSMUST00000111755.5	978	2	933	100	932	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCCACTAGTGACTACC	NA	NA	NA	NA	NA	NA	NA	NA	115682860	115682701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_115682700_115682900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023520	chr7	+	1479	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115692535	115704445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023521	chr7	+	1241	4	NNC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	6096	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGATTGTGATGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	115698674	115704443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_115698748_115701178_115701240_115702445_115702556_115703446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023522	chr7	+	385	3	ISM	ENSMUSG00000030663.13	ENST00000525684.1	567	4	6096	0	6096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGATGATGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	115698674	115703637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_115698759_115702445_115702556_115703446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023523	chr7	+	1249	4	NNC	ENSMUSG00000030663.13	novel	1479	5	NA	NA	6096	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	115698674	115704445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_115698759_115701178_115701240_115702445_115702551_115703446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023524	chr7	-	465	4	FSM	ENSMUSG00000045659.19	ENST00000532079.1	465	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGAGGCCAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	115907579	115734257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_115734475_115735152_115735248_115907324_115907384_115907485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023525	chr7	-	361	3	ISM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	1086	0	1024	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTGGTTCTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	115932344	115930739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_115930819_115931613_115931715_115932163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023526	chr7	-	377	4	ISM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	422	51	360	-46	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAATGCTGTTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	115933008	115930790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023527	chr7	-	374	4	ISM	ENSMUSG00000090862.4	ENSMUST00000205490.2	1317	5	185	894	185	-894	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGCTCCCACCTAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	115933183	115931638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_115931715_115932163_115932334_115932930_115933010_115933134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023528	chr7	-	409	4	ISM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	0	1424	0	-1419	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGCGGACAACAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	115933430	115932163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_115932334_115932930_115933010_115933134_115933184_115933319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023529	chr7	+	291	1	FSM	ENSMUSG00000108461.2	ENSMUST00000206201.2	750	1	459	0	459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGGATGAAGTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	116043268	116043559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_116043300_116043600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023530	chr7	+	124	2	ISM	ENSMUSG00000030659.15	ENST00000458064.6	1276	11	6187	11678	6187	-11571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTAAGTGGTCGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	116127256	116128107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_116127326_116128052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023531	chr7	+	100	2	ISM	ENSMUSG00000030659.15	ENSMUST00000183175.8	1913	13	28703	4526	11283	-4526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTATCCAAGAGAACG	NA	NA	NA	NA	NA	NA	NA	NA	116132352	116135152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_116132397_116135096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023532	chr7	-	1279	1	FSM	ENSMUSG00000107383.2	ENSMUST00000201488.2	1342	1	68	-5	68	5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCAGTCGCCTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	116425018	116423739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_116423700_116425000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023533	chr7	-	256	1	Genic_Genomic	ENSMUSG00000008683.17	novel	NA	NA	NA	NA	10630	1	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTGAATGGCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	117703849	117703593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_117703600_117703800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023534	chr7	-	734	5	FSM	ENSMUSG00000008683.17	ENSMUST00000106588.8	640	5	6	-100	6	100	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCATGACCATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117714894	117708186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117714694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023535	chr7	-	234	3	ISM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	32	10418	32	-5726	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGTAAGACATCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	117715379	117714012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117714088_117714331_117714470_117715358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023536	chr7	-	378	1	Genic_Genomic	ENSMUSG00000030654.10	novel	NA	NA	NA	NA	7995	2	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTTAACTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	117718489	117718111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_117718100_117718500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023537	chr7	-	533	3	ISM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	7618	1191	5217	118	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTTGTACAGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	117721267	117719304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117719634_117720383_117720469_117721148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023538	chr7	-	212	1	NIC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	6850	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGCCAGGCTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	117719634	117719422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_117719400_117719600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023539	chr7	-	259	2	FSM	ENSMUSG00000030654.10	ENST00000562819.5	317	2	-1	59	-1	-59	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAAGTGTTACAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	117726485	117719481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_117719634_117726378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023540	chr7	-	325	3	ISM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	3147	2268	746	-959	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCGTTGAAGAAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	117725738	117720381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117720469_117721148_117721267_117725618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023541	chr7	-	373	3	ISM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	2394	3035	-7	-1726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTATTTATTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	117726491	117721148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117721267_117725618_117725739_117726356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023542	chr7	-	425	3	ISM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	24	7504	24	-6195	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGGCTCTGCATGATAA	NA	NA	NA	NA	NA	NA	NA	NA	117728861	117725617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117725739_117726356_117726491_117728691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023543	chr7	-	652	3	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	17017	0	17017	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTATGTATTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	117795258	117792617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117792943_117794258_117794361_117795033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023544	chr7	-	489	3	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	14686	1655	14686	-1633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGAAAAAGAGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	117797589	117794272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117794361_117795033_117795259_117797413
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023545	chr7	-	497	3	ISM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	12293	2417	12293	-2395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGAATTACTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	117799982	117795034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117795259_117797413_117797588_117799883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023546	chr7	-	503	1	ISM	ENSMUSG00000058420.9	ENST00000355377.7	2946	7	67001	0	62342	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGAGTTATCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	117980441	117979938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_117979900_117980400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023547	chr7	-	911	3	ISM	ENSMUSG00000058420.9	ENSMUST00000203485.3	1932	7	5724	26127	1062	-26127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTCAGGTAAGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	118041721	118033064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_118033676_118036045_118036195_118041570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023548	chr7	-	1114	5	ISM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	7128	-1	7128	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGATCTTCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	118297873	118287766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023549	chr7	-	928	5	ISM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	49	3037	49	-3037	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTAGAAGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	118304952	118290804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023550	chr7	+	1049	3	ISM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	74047	-549	74047	549	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGAGTCATAACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	118437393	118441259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_118437455_118439777_118439925_118440418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023551	chr7	+	904	1	ISM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	101837	0	77939	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCACTGTGATGCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	118441285	118442189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_118441300_118442200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023552	chr7	-	1952	1	Genic_Genomic	ENSMUSG00000030980.18	novel	NA	NA	NA	NA	6517	5	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTTGAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118443391	118441439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_118441400_118443400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023553	chr7	-	322	1	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	4587	5	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTGTTCTTCAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	118445321	118444999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_118445000_118445300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023554	chr7	-	401	2	ISM	ENSMUSG00000030980.18	ENST00000568230.5	456	3	2101	0	2101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTGTCTTGTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	118447807	118445004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_118445318_118447719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023555	chr7	+	1332	2	ISM	ENSMUSG00000073856.12	ENSMUST00000106547.2	2026	9	85809	-1	85809	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGGGTTATTCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	118540806	118571876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_118540920_118570657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023556	chr7	-	624	1	ISM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	5082	0	5082	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	119314939	119314315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_119314300_119314900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023557	chr7	-	1151	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	114	1424	114	-1424	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTCTCAGGGGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	119319907	119315739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023558	chr7	+	2188	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-70	-1146	-70	19	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGCTTGGGAATGACAC	NA	NA	NA	NA	NA	NA	NA	NA	119339280	119341468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_119339300_119341500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023559	chr7	+	459	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	26	43513	26	-43513	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTAAACTTATTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	119398811	119404511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119398901_119400452_119400580_119401963_119402061_119404365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023560	chr7	+	446	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	1678	30330	1678	-30330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTAATGCTTTTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	119400463	119417694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119400580_119401963_119402061_119404365_119404510_119417605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023561	chr7	+	446	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	3178	29254	3178	-29254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCGTTACTTCCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	119401963	119418770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119402061_119404365_119404510_119417605_119417695_119418654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023562	chr7	+	527	5	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	5641	24657	5641	-24657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCACGTTATAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	119404426	119423367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023563	chr7	+	343	3	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	24191	23159	24191	-23159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTGACCAGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	119422976	119424865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119423118_119423267_119423363_119424758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023564	chr7	+	410	3	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	24486	20599	24486	-20599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTGAATGACCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	119423271	119427425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119423363_119424758_119424866_119427213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023565	chr7	+	567	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	25972	14400	25972	-14400	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGATGAGAAAATTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	119424757	119433624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119424866_119427213_119427430_119431893_119431999_119433486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023566	chr7	+	464	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	28475	5508	28475	-5508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCATGAATGGCAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	119427260	119442516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119427430_119431893_119431999_119433486_119433625_119442464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023567	chr7	+	430	4	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	33109	4859	33109	-4859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATTGGTGAAACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	119431894	119443165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119431999_119433486_119433625_119442464_119442558_119443070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023568	chr7	+	549	4	NNC	ENSMUSG00000030924.17	novel	2008	14	NA	NA	33110	-4737	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTTACTATTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	119431895	119443287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_119431997_119433486_119433625_119442464_119442558_119443070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023569	chr7	+	499	3	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	43678	4355	43678	-4355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGAGTGTGTCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	119442463	119443669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119442558_119443070_119443288_119443481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023570	chr7	+	486	3	ISM	ENSMUSG00000030924.17	ENST00000564274.5	2175	17	44323	3300	44323	-3300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATTTGATGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	119443108	119444724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119443288_119443481_119443670_119444605
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023571	chr7	+	417	3	ISM	ENSMUSG00000030924.17	ENST00000261377.11	2214	17	44696	-1	44696	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAATGATGGCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	119443481	119448064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119443670_119444605_119444725_119447954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023572	chr7	+	318	2	ISM	ENSMUSG00000030922.13	ENST00000568663.5	789	5	0	20469	0	-20469	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCGTCTCCAAGTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	119494489	119495100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119494582_119494874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023573	chr7	+	484	3	ISM	ENSMUSG00000030922.13	ENST00000568663.5	789	5	392	2081	-202	-2081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATGAGCGCCGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	119494881	119513488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119495114_119509026_119509186_119513395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023574	chr7	+	317	2	NNC	ENSMUSG00000030922.13	novel	875	4	NA	NA	-135	-6384	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGGCCCCATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	119494948	119509185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_119495114_119509033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023575	chr7	+	846	3	ISM	ENSMUSG00000030922.13	ENSMUST00000106516.2	1069	4	9696	22	9696	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGCTTTAGATTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	119509026	119515957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119509186_119513395_119513489_119515363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023576	chr7	+	232	2	NNC	ENSMUSG00000030922.13	novel	875	4	NA	NA	9696	-2094	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCACGCCCTGTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	119509026	119513475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_119509186_119513402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023577	chr7	+	212	1	ISM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	20280	381	16033	6	mono-exon	FALSE	NA	NA	NA	NA	NA	512	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCAGACCTCCAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	119515363	119515575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119515400_119515600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023578	chr7	+	364	1	ISM	ENSMUSG00000030922.13	ENSMUST00000106516.2	1069	4	16285	0	16285	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTTGTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	119515615	119515979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119515600_119516000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023579	chr7	+	1475	5	NNC	ENSMUSG00000030917.14	novel	1484	5	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTTTTCTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119701588	119720209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_119701739_119703852_119704057_119714608_119714778_119715442_119715582_119719396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023580	chr7	+	410	3	ISM	ENSMUSG00000030917.14	ENST00000261388.7	541	4	1	3948	1	-3948	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTCTCTGCGTCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119703838	119715469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119704053_119714608_119714778_119715442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023581	chr7	+	258	3	ISM	ENSMUSG00000030917.14	ENST00000261388.7	541	4	10839	0	10839	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACGTCGACTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	119714676	119719417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_119714778_119715442_119715582_119719399
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023582	chr7	+	452	3	FSM	ENSMUSG00000030889.15	ENST00000563755.1	449	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGACAGCAGAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	120398227	120399695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_120398377_120398727_120398877_120399541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023583	chr7	+	391	3	NNC	ENSMUSG00000030889.15	novel	449	3	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAACGACAGCAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120398279	120399693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_120398370_120398727_120398877_120399541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023584	chr7	+	1226	1	ISM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	63394	0	55036	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTGATTTGTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	120505447	120506673	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120505400_120506700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023585	chr7	+	290	3	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	10119	14769	10103	-14769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTGCTGACAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	120527127	120530209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120527227_120527650_120527734_120530101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023586	chr7	+	271	3	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	13101	13501	13085	-13501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACAGCGCAGGATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	120530109	120531477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120530210_120530483_120530534_120531356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023587	chr7	+	291	4	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	14349	11882	14333	-11882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCGTACATTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120531357	120533096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120531477_120532529_120532616_120532908_120532954_120533055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023588	chr7	+	324	4	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	15541	10862	15525	-10862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGCTTGGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120532549	120534116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120532616_120532908_120532954_120533055_120533148_120533995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023589	chr7	+	292	3	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	16050	8071	16034	-8071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATCTAGGCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120533058	120536907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120533148_120533995_120534117_120536825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023590	chr7	+	302	3	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	19815	6459	19799	-6459	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGGCTTGTGGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	120536823	120538519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120536908_120538218_120538279_120538361
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023591	chr7	+	586	3	ISM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	21353	5088	21337	-5088	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGACAGTTTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	120538361	120539890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120538520_120538971_120539034_120539524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023592	chr7	+	887	4	ISM	ENSMUSG00000030880.15	ENST00000418581.6	2514	20	22615	129	22615	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTACAATTTGAAATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120539639	120544972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120540049_120541712_120541791_120543769_120543896_120544698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023593	chr7	+	728	1	ISM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	27783	1138	27765	4	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCTGTGCTTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	120544789	120545517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120544800_120545500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023594	chr7	+	306	2	ISM	ENSMUSG00000030877.12	ENST00000420133.2	1087	3	10	4240	10	-4240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACGCAGTGGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	120588218	120590518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120588359_120590352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023595	chr7	+	359	2	ISM	ENSMUSG00000030877.12	ENST00000420133.2	1087	3	2722	0	2722	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAATGCCAGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	120590930	120594758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120591134_120594602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023596	chr7	+	167	1	NIC	ENSMUSG00000030877.12	novel	1883	8	NA	NA	6391	8	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGTCCCTTTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	120594599	120594766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_120594600_120594800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023597	chr7	+	1035	4	ISM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	4	19514	4	-19514	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGTGTCTTGGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	120633671	120656544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023598	chr7	+	1276	4	ISM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	13409	0	13409	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	120647076	120676058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120647252_120651309_120651520_120656437_120656623_120675352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023599	chr7	+	710	1	Genic_Genomic	ENSMUSG00000030876.8	novel	NA	NA	NA	NA	41683	2	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCACCATGTTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	120675350	120676060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_120675400_120676100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023600	chr7	+	583	4	ISM	ENSMUSG00000034990.16	ENST00000550753.5	1417	10	19930	-1	19930	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAAGCCAGTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	120755065	120762309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_120755135_120755650_120755749_120759552_120759749_120762089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023601	chr7	-	212	1	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	34289	0	34289	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTGTCACTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121586156	121585944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121585900_121586200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023602	chr7	-	271	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	30696	2912	30696	-2912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTGTTGTAATGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	121589749	121588856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121589025_121589646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023603	chr7	-	251	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	29590	3701	29590	-3701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCGGGATCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	121590855	121589645	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121589758_121590716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023604	chr7	-	249	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	26222	4850	26222	-4850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTGTTGTTGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	121594223	121590794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121590887_121594066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023605	chr7	-	275	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	23815	8122	23815	-8122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGTTTGTACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	121596630	121594066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121594225_121596513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023606	chr7	-	197	2	NNC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	23118	-10568	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTTCTGGGCCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	121597327	121596512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_121596668_121597285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023607	chr7	-	227	3	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	22259	11037	22259	-11037	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAAGCTGTTCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121598186	121596981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121597013_121597285_121597376_121598080
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023608	chr7	-	193	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	21037	12136	21037	-12136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGAGCTAAAAGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	121599408	121598080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121598207_121599341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023609	chr7	-	219	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	18473	15355	18473	-15355	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAATCTCCAGTTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	121601972	121601299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121601436_121601889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023610	chr7	-	214	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	13853	17165	13853	-17165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGACCTCCCCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	121606592	121603109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121603211_121606479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023611	chr7	-	176	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	10463	21609	10463	-21609	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTCTGGACATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	121609982	121607553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121607653_121609905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023612	chr7	-	253	2	ISM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	66	25427	66	-25427	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAGCTCCTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	121620379	121611371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121611457_121620211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023613	chr7	-	226	1	ISM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	28217	0	28217	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	121638269	121638043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121638000_121638300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023614	chr7	-	249	2	ISM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	27417	224	27417	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGAGCCTCTAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	121639069	121638267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121638382_121638934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023615	chr7	-	239	2	ISM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	20554	5693	20554	-5693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGGTTAGGGCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	121645932	121643736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121643890_121645846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023616	chr7	-	249	2	ISM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	19003	7822	19003	-7822	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCCAGAATTTAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	121647483	121645865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121645956_121647324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023617	chr7	-	246	2	ISM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	4266	16751	4266	-16751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGACACCCCGGTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	121662220	121654794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121654972_121662151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023618	chr7	+	264	2	ISM	ENSMUSG00000030870.13	ENST00000567264.1	641	4	0	1248	0	-1248	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTGGTGGATCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	121666666	121667109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_121666708_121666886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023619	chr7	+	541	2	ISM	ENSMUSG00000030870.13	ENST00000567264.1	641	4	219	144	219	-144	internal_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACCATTCGGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	121666885	121668213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_121667217_121668003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023620	chr7	+	278	2	ISM	ENSMUSG00000030870.13	ENST00000567264.1	641	4	1334	-5	1334	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTTGTCATCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	121668000	121668362	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_121668213_121668296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023621	chr7	-	718	1	ISM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	15766	0	15731	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTCCTAACATGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	121685343	121684625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_121684600_121685300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023622	chr7	-	850	1	Genic_Genomic	ENSMUSG00000030869.12	novel	NA	NA	NA	NA	10949	3	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGAGCATCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	121690125	121689275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_121689300_121690100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023623	chr7	-	1228	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	84	104	84	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTTATAATTTTAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	121700990	121689382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023624	chr7	+	1422	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	110	0	110	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	121732373	121748267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023625	chr7	+	995	1	NIC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	15009	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	121747272	121748267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_121747300_121748300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023626	chr7	+	1049	2	ISM	ENSMUSG00000030779.17	ENST00000381039.7	3371	11	19203	1248	19142	-1248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAGCTGAGGGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	122589282	122600532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_122589606_122599806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023627	chr7	+	920	1	ISM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	31074	0	30720	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTGCAAATGTATATTA	NA	NA	NA	NA	NA	NA	NA	NA	122600860	122601780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_122600900_122601800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023628	chr7	+	413	2	FSM	ENSMUSG00000030752.9	ENST00000568965.1	609	2	197	-1	197	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGGAAAGGACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	125051659	125060430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_125051901_125060258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023629	chr7	+	652	2	ISM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	16235	628	8620	384	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCCTCACTGCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	125060082	125060813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_125060180_125060258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023630	chr7	+	177	1	NIC	ENSMUSG00000030752.9	novel	2389	8	NA	NA	8793	3	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAAAGGACCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	125060255	125060432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_125060300_125060400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023631	chr7	-	589	4	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	20337	0	20337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTGTGTGAGGTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	125070431	125066811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023632	chr7	-	464	4	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	19643	639	19643	-639	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGGCCTCCAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	125071125	125067450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_125067572_125068200_125068318_125070284_125070432_125071046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023633	chr7	-	402	4	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	19430	1388	19430	-1388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCAGGCAGCAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	125071338	125068199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_125068318_125070284_125070432_125071046_125071125_125071279
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023634	chr7	-	423	4	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	5111	3545	5111	-3545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAAAAAGATGAGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	125085657	125070356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_125070432_125071046_125071125_125071279_125071402_125085509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023635	chr7	-	508	4	ISM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	23	4235	23	-4235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACAGTACTCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	125090745	125071046	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_125071125_125071279_125071402_125085509_125085657_125090584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023636	chr7	+	1001	1	ISM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	26354	0	26354	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTCTCAGAGAGACAATT	NA	NA	NA	NA	NA	NA	NA	NA	125177645	125178646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_125177600_125178600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023637	chr7	+	1511	4	FSM	ENSMUSG00000042978.12	ENST00000671413.3	1512	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGCAGCGCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	125848034	125891821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_125848285_125889028_125889262_125890214_125890418_125890996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023638	chr7	-	111	2	NNC	ENSMUSG00000030742.8	novel	588	7	NA	NA	4122	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125963602	125963372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_125963437_125963555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023639	chr7	-	392	5	ISM	ENSMUSG00000030742.8	ENST00000395456.7	512	8	415	-2	415	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGAGTGGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	125967309	125963372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023640	chr7	-	130	2	ISM	ENSMUSG00000030742.8	ENST00000395456.7	512	8	192	3945	192	-3945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGACCTGTCCAGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	125967532	125967319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_125967388_125967470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023641	chr7	-	101	2	ISM	ENSMUSG00000030742.8	ENST00000566177.5	588	7	10	4105	10	-4105	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGATGGTAAGGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	125967714	125967479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_125967533_125967666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023642	chr7	+	621	2	ISM	ENSMUSG00000030727.13	ENSMUST00000106405.2	2279	12	15383	98	15383	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATTTGTCCGTAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	126043994	126044975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126044109_126044468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023643	chr7	-	656	3	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	12775	2434	12775	-2434	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAATGGTACTGGCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	126049505	126047463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126047555_126047708_126048045_126049276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023644	chr7	-	649	5	ISM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	3415	10617	3415	-10617	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGAGTCTGCCCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126058865	126055646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126055716_126055891_126056190_126056285_126056372_126057079_126057161_126058750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023645	chr7	-	450	1	Genic_Genomic	ENSMUSG00000030733.11	novel	NA	NA	NA	NA	7380	1	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGGCTGATATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	126066614	126066164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_126066200_126066600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023646	chr7	-	787	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	5853	371	5853	-365	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAGCCTTAAGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	126068141	126066541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126066946_126067644_126067814_126067927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023647	chr7	-	634	3	ISM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	6460	468	6179	-459	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGGGGGCAACGGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126067815	126066635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126066946_126067121_126067222_126067591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023648	chr7	-	642	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	5491	1420	5491	-1414	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGCCAGGAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	126068503	126067590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126067814_126067927_126068140_126068296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023649	chr7	-	434	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	3524	1916	3524	-1910	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCTATCCTTGGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	126070470	126068086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126068140_126068296_126068501_126070293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023650	chr7	-	373	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	3334	2227	3334	-2221	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCTCCTCGAATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	126070660	126068397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126068501_126070293_126070470_126070566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023651	chr7	-	324	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	3019	4171	3019	-4165	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATCTGCTGCTGGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	126070975	126070341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126070470_126070566_126070659_126070871
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023652	chr7	-	548	3	ISM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	2340	4452	2340	-4446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCGCTTCATGTGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	126071654	126070622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126070659_126070871_126070974_126071244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023653	chr7	-	515	2	ISM	ENSMUSG00000030733.11	ENSMUST00000205440.2	3089	11	1501	5697	1233	-5686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGAGAGCTGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	126072761	126071862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126072267_126072650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023654	chr7	-	563	2	ISM	ENSMUSG00000030733.11	ENST00000618521.4	2947	9	32	5696	-26	-5688	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTTGAGAGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	126074328	126071864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126072267_126074167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023655	chr7	+	834	5	ISM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	1773	69	1756	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTCTCCTGCTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	126088305	126089830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023656	chr7	+	793	4	ISM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	1966	0	1949	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTTGTCTTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	126088498	126089899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126088613_126088723_126088876_126088963_126089084_126089492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023657	chr7	-	452	1	ISM	ENSMUSG00000032637.16	ENST00000340394.12	3798	23	11241	0	10255	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	126091331	126090879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126090900_126091300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023658	chr7	-	325	2	ISM	ENSMUSG00000032637.16	ENST00000340394.12	3798	23	10512	260	9526	52	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCCTGCTCTGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126092060	126091139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126091388_126091983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023659	chr7	-	316	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	9035	1187	9035	-882	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCCCAAGGCGCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	126092551	126092073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126092174_126092335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023660	chr7	-	325	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	8742	1457	8742	-1152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCCAGGTAGGAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126092844	126092343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126092549_126092724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023661	chr7	-	390	3	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	7926	2046	7926	-1741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGGTGCCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	126093660	126092932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126093063_126093310_126093502_126093591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023662	chr7	-	125	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	7780	2711	7780	-2406	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGTGAGCAGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	126093806	126093597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126093665_126093748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023663	chr7	-	124	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	7171	2929	7171	-2624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGCTCTACAGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	126094415	126093815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126093896_126094371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023664	chr7	-	133	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	6064	4106	6064	-3801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAAGCATGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	126095522	126094992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126095064_126095460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023665	chr7	-	167	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	4805	5600	4805	-5295	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTATCTTCACCCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	126096781	126096486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126096537_126096664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023666	chr7	-	162	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	3193	6501	3193	-6196	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCGCCTACGGATTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	126098393	126097387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126097478_126098321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023667	chr7	-	129	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	2192	7492	2192	-7187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAGGAGAACTATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	126099394	126098378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126098414_126099300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023668	chr7	-	129	2	ISM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	1102	9388	1102	-9083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTGTACTCAAATTAGG	NA	NA	NA	NA	NA	NA	NA	NA	126100484	126100274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126100347_126100427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023669	chr7	-	405	4	NNC	ENSMUSG00000030720.17	novel	792	9	NA	NA	5605	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACAGGAGTTGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	126174431	126171444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_126171554_126171638_126171784_126174165_126174260_126174374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023670	chr7	-	480	5	ISM	ENSMUSG00000030720.17	ENST00000355477.10	945	11	5446	0	5446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACAGGAGTTGCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	126174590	126171444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023671	chr7	-	464	6	ISM	ENSMUSG00000030720.17	ENST00000355477.10	945	11	2984	213	2984	-213	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGCTCTGGAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	126177052	126171657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023672	chr7	-	352	4	ISM	ENSMUSG00000030720.17	ENST00000637100.1	803	9	2939	0	2939	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCACACCCACCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	126177097	126174146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126174260_126174374_126174431_126174642_126174709_126176980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023673	chr7	-	377	5	ISM	ENSMUSG00000030720.17	ENST00000395653.9	792	9	635	2924	635	-222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGCAGGTGGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	126179401	126174368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126179315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023674	chr7	-	464	5	ISM	ENSMUSG00000030720.17	ENST00000637100.1	803	9	452	2866	452	-2866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGCACCGAGACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126179584	126177012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023675	chr7	-	1301	3	NNC	ENSMUSG00000030720.17	novel	803	9	NA	NA	2	-5168	intron_retention	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTACGAAGCTGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	126184877	126179314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_126179402_126179504_126179585_126183743
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023676	chr7	+	1163	2	NNC	ENSMUSG00000042759.13	novel	457	3	NA	NA	-4609	-2711	intron_retention	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGGCAGCTGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	126179504	126184831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_126179603_126183766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023677	chr7	-	831	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCGTGTGTTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	126224848	126222418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126222752_126224061_126224206_126224494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023678	chr7	+	323	3	FSM	ENSMUSG00000030714.15	ENST00000549950.5	314	3	-6	-3	-6	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTAGGCTTGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	126270700	126271861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126270840_126270905_126270970_126271741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023679	chr7	+	309	3	NNC	ENSMUSG00000030714.15	novel	314	3	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGCTGGTAGGCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126270705	126271859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_126270833_126270905_126270970_126271741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023680	chr7	+	309	3	NNC	ENSMUSG00000030714.15	novel	314	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGCTGGTAGGCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126270706	126271859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_126270840_126270905_126270970_126271747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023681	chr7	+	396	3	FSM	ENSMUSG00000030714.15	ENST00000649930.1	392	3	0	-4	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTAGGCTTGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	126270710	126271861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126270840_126270905_126271053_126271741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023682	chr7	-	232	1	ISM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	6085	0	6085	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGGCTTCAGGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	126288871	126288639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126288600_126288900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023683	chr7	-	267	2	ISM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	3978	1989	3978	-1989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCTTACCTTTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	126290978	126290628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126290828_126290910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023684	chr7	+	240	2	FSM	ENSMUSG00000047721.9	ENSMUST00000106369.2	642	2	-13	415	-13	-415	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCGGGAGCCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	126295131	126295454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126295272_126295354
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023685	chr7	+	518	1	NIC	ENSMUSG00000047721.9	novel	1266	3	NA	NA	207	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTCAGTGTGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	126295351	126295869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_126295400_126295900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023686	chr7	+	224	2	ISM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	746	379	209	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAAACCTGGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	126295353	126295851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126295453_126295726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023687	chr7	+	169	1	Genic_Genomic	ENSMUSG00000047721.9	novel	NA	NA	NA	NA	918	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAATGCACGCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	126296062	126296231	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_126296100_126296200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023688	chr7	+	739	5	NNC	ENSMUSG00000063065.14	novel	1267	7	NA	NA	130	-194	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACCAGCGGCGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	126359898	126363822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_126360084_126362206_126362397_126362912_126363028_126363405_126363538_126363705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023689	chr7	+	727	6	ISM	ENSMUSG00000063065.14	ENST00000395200.5	960	7	1146	-1	260	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAACAGACACCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	126360028	126364017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126360086_126362206_126362397_126362912_126363028_126363405_126363538_126363705_126363816_126363894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023690	chr7	+	972	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCTCACATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126376127	126379686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023691	chr7	+	1682	7	FSM	ENSMUSG00000030699.17	ENST00000627355.2	1718	7	39	-3	39	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCTAATGGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	126380697	126384732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126380797_126380884_126381120_126382016_126382285_126382376_126382548_126383663_126383783_126383863_126384048_126384126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023692	chr7	+	1224	5	ISM	ENSMUSG00000030699.17	ENST00000627355.2	1718	7	1349	130	1349	68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCAAATGGGGCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126382007	126384599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126382285_126382376_126382548_126383663_126383783_126383863_126384048_126384126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023693	chr7	-	980	5	ISM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	4161	-2	4161	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126387351	126385037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023694	chr7	-	146	1	ISM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	3875	0	2385	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	126394551	126394405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126394400_126394600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023695	chr7	-	658	3	ISM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	3015	-2	1638	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	126395298	126394405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126394687_126394784_126394985_126395121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023696	chr7	-	1100	6	ISM	ENSMUSG00000030695.17	ENST00000569798.5	1270	7	242	23	242	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCACTTGCTATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	126396694	126394545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023697	chr7	-	129	2	ISM	ENSMUSG00000030695.17	ENST00000569798.5	1270	7	1454	739	1454	-739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTCTATCTGGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	126395482	126395261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126395297_126395388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023698	chr7	-	535	4	ISM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	62	2099	62	-1984	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGGCAGACTCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	126398251	126396506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126396721_126396815_126396949_126397145_126397299_126398216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023699	chr7	-	265	2	ISM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	68	2420	-45	-2303	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCACCGGTGCGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	126398358	126396825	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126396949_126398216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023700	chr7	-	1721	4	ISM	ENSMUSG00000030689.16	ENSMUST00000050833.14	1944	5	3510	0	3510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGCTTGGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	126457125	126450751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023701	chr7	-	1333	1	ISM	ENSMUSG00000030689.16	ENSMUST00000050833.14	1944	5	8549	2	8549	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTTGTGCTTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	126452086	126450753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126450800_126452100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023702	chr7	+	724	2	ISM	ENSMUSG00000052301.15	ENST00000564944.5	1660	11	3741	-113	3741	113	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTACCTCCCGAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	126450878	126451687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126450978_126451062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023703	chr7	+	625	1	ISM	ENSMUSG00000052301.15	ENSMUST00000064110.14	2538	11	4520	8	4107	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGAAGTGGGCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126451244	126451869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126451200_126451900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023704	chr7	-	295	3	ISM	ENSMUSG00000030689.16	ENST00000567705.5	827	7	4007	239	3671	-239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCACATACAATCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	126456964	126452051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126452164_126456397_126456464_126456847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023705	chr7	-	259	3	ISM	ENSMUSG00000030689.16	ENST00000567705.5	827	7	3846	4584	3510	-4584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGATGTGGGACTATA	NA	NA	NA	NA	NA	NA	NA	NA	126457125	126456396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126456464_126456847_126456960_126457045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023706	chr7	-	233	3	ISM	ENSMUSG00000030689.16	ENST00000567705.5	827	7	504	5049	168	-5049	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCTGAGCTCGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126460467	126456861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126456960_126457045_126457125_126460411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023707	chr7	-	217	3	ISM	ENSMUSG00000030689.16	ENST00000567705.5	827	7	253	5219	-83	-5219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTCCAGGGCAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126460718	126457031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126457125_126460411_126460465_126460647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023708	chr7	-	218	3	ISM	ENSMUSG00000030689.16	ENST00000567705.5	827	7	1	8599	1	-8599	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCAAAGTCATGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	126460970	126460411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126460465_126460647_126460719_126460876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023709	chr7	-	925	1	ISM	ENSMUSG00000059981.13	ENST00000279394.7	4274	19	17673	0	17673	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGATGTCTCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	126465773	126464848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126464800_126465800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023710	chr7	-	974	2	ISM	ENSMUSG00000059981.13	ENST00000279394.7	4274	19	17094	449	17094	-448	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTCAAATATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	126466352	126465297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126466088_126466168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023711	chr7	-	550	1	ISM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	14648	3	14219	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACACCTTTGGCCCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	126469227	126468677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126468700_126469200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023712	chr7	-	580	2	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	12368	1431	12279	-1431	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAGGAGTCTGGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	126471167	126470323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126470814_126471077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023713	chr7	-	630	3	ISM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	9906	2285	9817	-2285	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGGAGGCAGCGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	126473629	126471177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126471282_126471368_126471735_126473469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023714	chr7	-	791	5	FSM	ENSMUSG00000060538.15	ENSMUST00000120007.8	1087	5	294	2	294	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	NA	NA	NA	NA	NA	NA	NA	NA	126496302	126485391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023715	chr7	+	512	3	ISM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	168	4209	168	-4209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCCTGGAGCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	126528218	126540594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126528471_126529804_126529975_126540504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023716	chr7	+	626	2	ISM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	13265	320	13265	-320	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGCTCTTCAGAAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126541315	126544483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126541515_126544056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023717	chr7	+	554	1	Genic_Genomic	ENSMUSG00000030685.6	novel	NA	NA	NA	NA	16200	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGACTCTCGGGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	126544250	126544804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_126544200_126544800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023718	chr7	+	1033	4	ISM	ENSMUSG00000030682.5	ENSMUST00000206346.2	806	6	-443	655	231	-655	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCACTTCCTGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	126575316	126578168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023719	chr7	+	950	4	ISM	ENSMUSG00000030682.5	ENSMUST00000205830.2	805	5	1405	-341	1405	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGTGTTTACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126577429	126579334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_126577588_126578086_126578169_126578493_126578576_126578706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023720	chr7	+	631	1	NIC	ENSMUSG00000030682.5	novel	1974	6	NA	NA	2679	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGTGTTTACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126578703	126579334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_126578700_126579300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023721	chr7	-	649	4	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	25718	0	25718	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTTTCCCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	126588075	126586031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023722	chr7	-	605	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	24703	1470	24703	-1470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGAGACGGTAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	126589090	126587501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126587617_126587997_126588115_126588717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023723	chr7	-	655	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	22148	2014	22148	-2014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCTGAAAAAGCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	126591645	126588045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126588115_126588717_126589105_126591446
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023724	chr7	-	810	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	21827	2702	21827	-2702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGCAGCAGCCAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	126591966	126588733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126589105_126591446_126591645_126591725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023725	chr7	-	629	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	20871	5460	20871	-5460	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCAGATCATGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	126592922	126591491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126591645_126591725_126591971_126592691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023726	chr7	-	595	3	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	18774	5738	18774	-5738	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCAGCGGTGCAGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126595019	126591769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126591971_126592691_126592974_126594907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023727	chr7	-	250	1	NIC	ENSMUSG00000092534.9	novel	693	5	NA	NA	1202	-13553	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCAGGAGGCAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	126614454	126614204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_126614200_126614500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023728	chr7	-	504	3	FSM	ENSMUSG00000107068.2	ENSMUST00000202798.2	1412	3	682	226	682	-226	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGACTGGTGCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	126615842	126614448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126614642_126615371_126615455_126615614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023729	chr7	-	888	1	ISM	ENSMUSG00000045114.11	ENSMUST00000159916.5	2501	4	2598	195	1744	1	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCCAGCTGCGATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	126617785	126616897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126616900_126617800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023730	chr7	-	990	2	ISM	ENSMUSG00000045114.11	ENST00000637403.1	1942	3	1331	157	1331	-157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTTTGTAAACAGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	126618198	126617055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126617903_126618055
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023731	chr7	-	1614	3	FSM	ENSMUSG00000045114.11	ENST00000637403.1	1942	3	0	328	0	36	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGGTCCCAAAGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	126619529	126617226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126617903_126618055_126618189_126618724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023732	chr7	-	860	3	FSM	ENSMUSG00000045114.11	ENST00000637565.1	1537	3	1	676	1	301	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATCTCTCCCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	126619528	126617574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126617903_126618055_126618178_126619118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023733	chr7	+	1850	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	1	81	1	-81	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTTGTTTCATTATT	NA	NA	NA	NA	NA	NA	NA	NA	126690531	126693077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126690645_126691340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023734	chr7	+	1749	1	Genic_Genomic	ENSMUSG00000045165.7	novel	NA	NA	NA	NA	815	1	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGTATGACCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126691410	126693159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_126691400_126693200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023735	chr7	-	2271	3	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	1475	32	1412	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTGTGGTAATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	126793635	126791199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126793103_126793186_126793294_126793374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023736	chr7	-	599	2	ISM	ENSMUSG00000042502.11	ENSMUST00000035771.5	1309	7	972	545	972	-545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGGAGGGCACGGG	NA	NA	NA	NA	NA	NA	NA	NA	126794075	126793374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126793814_126793915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023737	chr7	+	732	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	34	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGTTCATGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	126810813	126813470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023738	chr7	+	1867	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	41	1434	41	-1298	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCACCTGGTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126832273	126835917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126832659_126834435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023739	chr7	+	1666	1	Genic_Genomic	ENSMUSG00000045598.11	novel	NA	NA	NA	NA	3260	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTGTCATAGACAACTA	NA	NA	NA	NA	NA	NA	NA	NA	126835686	126837352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_126835700_126837400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023740	chr7	+	1486	3	FSM	ENSMUSG00000054716.5	ENSMUST00000052509.6	1484	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGATGCCTGTAAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	126843445	126853977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126843781_126844156_126844307_126852976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023741	chr7	+	1124	3	FSM	ENSMUSG00000054716.5	ENST00000434417.1	1121	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGACTGGCACCTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	126843657	126853814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_126843781_126844143_126844307_126852976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023742	chr7	+	1114	3	NNC	ENSMUSG00000054716.5	novel	1121	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGACTGGCACCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126843658	126853813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_126843781_126844143_126844307_126852984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023743	chr7	+	1096	3	NNC	ENSMUSG00000054716.5	novel	1121	3	NA	NA	19	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTGGGACTGGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	126843677	126853810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_126843781_126844143_126844311_126852984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023744	chr7	+	1094	3	NNC	ENSMUSG00000054716.5	novel	1484	3	NA	NA	19	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGACTGGCACCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126843677	126853813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_126843785_126844156_126844307_126852976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023745	chr7	+	1085	3	NNC	ENSMUSG00000054716.5	novel	1121	3	NA	NA	22	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGACTGGCACCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	126843680	126853813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_126843781_126844143_126844292_126852976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023746	chr7	-	680	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTTTCTTGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	126859883	126856128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126856509_126858529_126858641_126859694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023747	chr7	-	671	3	NNC	ENSMUSG00000042462.5	novel	676	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCGATTTTTCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126859880	126856130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_126856505_126858529_126858641_126859694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023748	chr7	-	1952	1	FSM	ENSMUSG00000049091.8	ENSMUST00000082428.6	2177	1	227	-2	227	2	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTAATGTTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	126873000	126871048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126871000_126873000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023749	chr7	-	2226	3	FSM	ENSMUSG00000047371.8	ENST00000380412.7	2231	3	9	-4	9	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCCTTAAGATGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	126944551	126941962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126943643_126943723_126944039_126944320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023750	chr7	-	587	1	ISM	ENSMUSG00000047371.8	ENST00000380412.7	2231	3	2007	0	2007	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCGTCCTTAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	126942553	126941966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_126942000_126942600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023751	chr7	-	618	2	FSM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	148	1590	113	-1590	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAACTCAAAGTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	126944447	126943556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126944048_126944320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023752	chr7	-	147	1	Genic_Genomic	ENSMUSG00000054381.6	novel	NA	NA	NA	NA	3335	5	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTGCTCCTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	126971850	126971703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_126971700_126971800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023753	chr7	-	2064	3	FSM	ENSMUSG00000078580.4	ENSMUST00000074249.7	2063	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGACATGTACCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	126992801	126990077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126991688_126992172_126992287_126992461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023754	chr7	-	481	2	FSM	ENSMUSG00000078580.4	ENST00000252799.3	476	2	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCAACATAGAGGGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	126992618	126990596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_126990632_126992172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023755	chr7	-	634	2	ISM	ENSMUSG00000045757.7	ENSMUST00000059199.7	2508	3	617	1398	617	-1398	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCTGCTTCAGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	127005377	127004237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_127004832_127005337
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023756	chr7	-	678	1	ISM	ENSMUSG00000045251.14	ENST00000563276.5	807	2	1896	0	1896	0	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGGGAGGGCTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	127018792	127018114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_127018100_127018800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023757	chr7	-	983	3	FSM	ENSMUSG00000045251.14	ENST00000223459.11	978	3	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCCAGTGTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127021184	127018144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_127018793_127020559_127020691_127020980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023758	chr7	-	968	3	NNC	ENSMUSG00000045251.14	novel	978	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCCCCAGTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	127021177	127018145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_127018793_127020566_127020691_127020980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023759	chr7	-	1013	1	ISM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	6010	0	5845	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGCTCCTTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	127042320	127041307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_127041300_127042300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023760	chr7	+	373	1	ISM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	6016	0	4897	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTCCTTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127075558	127075931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127075600_127075900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023761	chr7	-	896	5	ISM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	9	778	9	-778	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGTTCCAGAATTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	127308096	127304927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023762	chr7	+	1355	3	FSM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTCCATGTGGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127311904	127317364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_127311952_127313096_127313216_127316175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023763	chr7	+	1189	1	ISM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	4268	0	4060	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTCCATGTGGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127316175	127317364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127316200_127317400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023764	chr7	+	1417	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	28	551	28	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCAGATGAGCCACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	127369014	127373771	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_127369389_127372728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023765	chr7	+	1184	1	Genic_Genomic	ENSMUSG00000043964.15	novel	NA	NA	NA	NA	4155	3	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTATTCCCAGACTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	127373141	127374325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_127373100_127374300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023766	chr7	+	1081	2	ISM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	1620	101	1318	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCCTCTCCTAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	127401405	127402873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127401571_127401957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023767	chr7	+	936	1	ISM	ENSMUSG00000108815.2	ENSMUST00000154987.8	5188	19	17259	0	17259	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	127402038	127402974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127402000_127403000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023768	chr7	-	1628	2	ISM	ENSMUSG00000049728.15	ENSMUST00000106261.8	2410	3	7218	416	7218	-416	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGCTCACACCCGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	127467600	127465580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_127466536_127466927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023769	chr7	-	752	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCATATGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127494793	127492234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_127492664_127493676_127493787_127494580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023770	chr7	+	515	3	ISM	ENSMUSG00000030802.15	ENSMUST00000124533.3	1792	10	30	3127	30	-3127	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCGGAGGGGACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127503963	127504653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127504298_127504393_127504463_127504541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023771	chr7	+	758	4	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	3192	1620	2512	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCCTCTTGGGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	127506445	127507773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127506520_127506613_127506704_127507092_127507252_127507338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023772	chr7	+	494	1	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	5646	0	4966	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTAGTGCCTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	127508899	127509393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127508900_127509400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023773	chr7	+	558	3	NNC	ENSMUSG00000030801.11	novel	1579	11	NA	NA	12275	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATTCCTCGCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	127523962	127525009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_127524119_127524284_127524436_127524758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023774	chr7	+	475	3	ISM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	12280	82	12280	-82	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGACTTTGGAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	127523967	127524927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127524119_127524280_127524436_127524758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023775	chr7	-	263	1	ISM	ENSMUSG00000070371.12	ENSMUST00000118755.8	3028	15	13825	0	2550	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	127532072	127531809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_127531800_127532100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023776	chr7	-	311	2	ISM	ENSMUSG00000070371.12	ENSMUST00000118755.8	3028	15	9956	3687	-1319	-3526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTGAGAATCCATACAT	NA	NA	NA	NA	NA	NA	NA	NA	127535941	127535496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_127535627_127535760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023777	chr7	+	473	3	ISM	ENSMUSG00000030795.19	ENST00000380244.7	1791	16	2228	9739	2207	-9739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGTGGTGGAGGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	127568886	127571462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127569044_127571012_127571155_127571288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023778	chr7	-	375	1	Genic_Genomic	ENSMUSG00000030785.9	novel	NA	NA	NA	NA	579	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTTGTGTTAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	127804980	127804605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_127804600_127805000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023779	chr7	-	460	2	ISM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	364	42	364	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTTATACAAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	127805195	127804648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_127804985_127805071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023780	chr7	-	1342	1	FSM	ENSMUSG00000062944.5	ENSMUST00000078816.5	3574	1	2232	0	2232	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTGTTTATGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	127834971	127833629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_127833600_127835000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023781	chr7	+	3209	5	ISM	ENSMUSG00000030782.18	ENSMUST00000164710.8	3788	10	2488	-8	1124	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAAAAGAGGAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	127848471	127854879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023782	chr7	+	615	1	NIC	ENSMUSG00000030782.18	novel	3788	10	NA	NA	4922	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCCAGAGAACCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	127852269	127852884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_127852300_127852900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023783	chr7	-	866	5	FSM	ENSMUSG00000030844.12	ENSMUST00000033133.12	880	5	14	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTAGTCATTTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	128019883	127975344	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_127975767_127990687_127990832_128004893_128004981_128006082_128006202_128019789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023784	chr7	+	2516	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	46	0	46	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	128125385	128148705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023785	chr7	+	869	3	ISM	ENSMUSG00000042105.19	ENST00000637174.1	2011	6	3227	776	3227	-776	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACACGGACTGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	128293969	128296490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_128294107_128295368_128295461_128295850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023786	chr7	+	2074	1	ISM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	82992	0	5333	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGCTGTAGCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128296075	128298149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_128296100_128298100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023787	chr7	-	226	2	ISM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	41140	1941	41131	-615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACATTGTTTTATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	128301079	128300105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_128300295_128301042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023788	chr7	-	214	2	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	36881	4538	36881	-4538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGATCTACCTGACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	128305329	128304028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_128304132_128305218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023789	chr7	-	212	2	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	35895	5763	35895	-5763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCATCACATCTGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	128306315	128305253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_128305353_128306202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023790	chr7	-	222	2	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	33330	6765	33330	-6765	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTGGTCATTGACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	128308880	128306255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_128306369_128308771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023791	chr7	-	377	3	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	30559	9292	30559	-9292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCCAGCAGTAAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	128311651	128308782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_128308890_128310805_128310930_128311505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023792	chr7	-	233	2	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	24414	16678	24414	-16678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTCCTCTGCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128317796	128316168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_128316275_128317669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023793	chr7	-	196	2	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	15287	26333	15287	-26333	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGACAGTTAACCAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	128326923	128325823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_128325933_128326836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023794	chr7	-	249	2	ISM	ENSMUSG00000048170.15	ENSMUST00000119081.2	2347	17	158	27379	158	-27379	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGCTGAAGGAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	128342052	128326869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_128326923_128341856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023795	chr7	+	1164	1	ISM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	38730	0	38730	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128385396	128386560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_128385400_128386600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023796	chr7	+	912	1	ISM	ENSMUSG00000042055.14	ENSMUST00000084519.7	4550	29	42964	0	42964	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTGAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	129236550	129237462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_129236600_129237500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023797	chr7	-	627	1	ISM	ENSMUSG00000030849.19	ENSMUST00000120187.9	4311	16	103172	14	46598	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTTTTTTAATACTCG	NA	NA	NA	NA	NA	NA	NA	NA	129764821	129764194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129764200_129764800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023798	chr7	-	329	1	ISM	ENSMUSG00000030849.19	ENSMUST00000120187.9	4311	16	102769	715	46195	5	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTTGATTTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129765224	129764895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129764900_129765200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023799	chr7	-	765	3	ISM	ENSMUSG00000030849.19	ENST00000682772.1	3374	13	39864	1086	39864	157	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGTATAAATATATATT	NA	NA	NA	NA	NA	NA	NA	NA	129771555	129765281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129765854_129769432_129769539_129771468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023800	chr7	-	373	3	ISM	ENSMUSG00000030849.19	ENST00000682772.1	3374	13	31823	9159	31823	-7666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAGCGATGTGTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	129779596	129773354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129773413_129774546_129774670_129779404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023801	chr7	-	390	3	ISM	ENSMUSG00000030849.19	ENST00000682772.1	3374	13	29205	10395	29205	-8902	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGGATATCAACAACATA	NA	NA	NA	NA	NA	NA	NA	NA	129782214	129774590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129774670_129779404_129779596_129782094
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023802	chr7	-	723	5	ISM	ENSMUSG00000030849.19	ENST00000682772.1	3374	13	13311	15263	13311	-13770	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCCTGCACCTACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	129798108	129779458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023803	chr7	-	536	3	ISM	ENSMUSG00000030849.19	ENST00000682772.1	3374	13	8515	33710	8515	-32217	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAAAGTAGATAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	129802904	129797905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129798105_129800148_129800294_129802712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023804	chr7	-	388	3	ISM	ENSMUSG00000030849.19	ENST00000346997.6	2463	17	42737	34534	-9434	-34534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGAATATACGTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	129820853	129800222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129800294_129802712_129802904_129820727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023805	chr7	-	413	3	ISM	ENSMUSG00000030849.19	ENST00000346997.6	2463	17	33065	37099	-19106	-37099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGATCAAGCACGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	129830525	129802787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129802904_129820727_129820852_129830352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023806	chr7	-	534	3	ISM	ENSMUSG00000030849.19	ENST00000356226.8	3528	16	4255	55850	-7	-55062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTACCACCTCGATGTCG	NA	NA	NA	NA	NA	NA	NA	NA	129863741	129820750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129820852_129830352_129830523_129863478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023807	chr7	-	531	2	ISM	ENSMUSG00000030849.19	ENST00000356226.8	3528	16	204	98577	103	-97789	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCATGCGTGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	129867792	129863477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129863740_129867523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023808	chr7	-	2076	1	ISM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	125962	0	125893	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	129995298	129993222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129993200_129995300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023809	chr7	-	233	1	ISM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	125551	2254	125482	1	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTAGTGTTCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129995709	129995476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129995500_129995700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023810	chr7	-	412	2	ISM	ENSMUSG00000030850.18	ENST00000540606.6	2132	13	125552	42	125043	-42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCCTGCCTATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	129996148	129995519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129995710_129995926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023811	chr7	-	402	3	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	55228	1	55228	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCTGCACCTCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	130065963	129996288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_129996467_130020177_130020299_130065860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023812	chr7	-	373	3	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	52021	23923	52021	-23923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGCCGTTTCAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	130069170	130020210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130020299_130065860_130065961_130068985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023813	chr7	-	188	2	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	52132	69559	52132	-69559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGTGCCAGTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	130069059	130065846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130065961_130068985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023814	chr7	-	335	3	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	15609	72709	15609	-72709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCATTAAGGTAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	130105582	130068996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130069168_130083412_130083446_130105451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023815	chr7	-	383	3	ISM	ENSMUSG00000030850.18	ENSMUST00000178534.8	1530	12	12260	87124	11760	-87124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGATTGCTCTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130109431	130083411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130083446_130105451_130105581_130109211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023816	chr7	-	402	2	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	10248	112947	10248	-112947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCATCGCACAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	130110943	130109234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130109430_130110736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023817	chr7	-	395	3	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	5635	114475	5635	-114475	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTCATATTGGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	130115556	130110762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130110989_130112540_130112645_130115491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023818	chr7	-	232	3	ISM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	3292	116253	3292	-116253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATGAGATCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	130117899	130112540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130112645_130115491_130115555_130117834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023819	chr7	-	201	3	ISM	ENSMUSG00000030850.18	ENSMUST00000178534.8	1530	12	13	119202	13	-119202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCTACAATGAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	130121678	130115489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130115555_130117834_130117899_130121606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023820	chr7	+	1888	6	NNC	ENSMUSG00000030852.19	novel	3464	15	NA	NA	30	-20492	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACGTGTACGATGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	130318460	130342687	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_130318570_130330252_130331589_130335235_130335297_130336678_130336881_130341541_130341604_130342569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023821	chr7	+	395	2	ISM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	43	36043	43	-32707	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAGGTGAGCACGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	130318473	130330472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130318570_130330173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023822	chr7	+	1438	3	ISM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	11928	29660	11928	-26324	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATTCAATTCACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	130330358	130336855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130331559_130335235_130335297_130336678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023823	chr7	+	317	3	ISM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	23144	22484	23144	-19148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCCTGAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	130341574	130344031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130341604_130342569_130342686_130343859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023824	chr7	+	427	3	ISM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	24146	13450	24146	-10114	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCTGTGGTGTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	130342576	130353065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130342686_130343859_130344032_130352919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023825	chr7	+	346	3	ISM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	25455	12896	25455	-9560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGGAAGTGGTGGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	130343885	130353619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130344032_130352919_130353064_130353563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023826	chr7	+	318	3	ISM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	42526	4759	42526	-1423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAAGGTGAGAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	130360956	130361756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130361056_130361263_130361371_130361644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023827	chr7	+	432	2	ISM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	43210	225	43210	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTCAGATTCTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	130361640	130366290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130361766_130365983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023828	chr7	+	460	1	ISM	ENSMUSG00000030852.19	ENST00000360561.7	3908	16	71863	0	47625	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	130366055	130366515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130366100_130366500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023829	chr7	+	149	2	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	7669	19363	7669	-17540	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTTTTTTTGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	130487130	130494011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130487179_130493910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023830	chr7	+	164	2	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	19699	10984	19699	-9161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCTTACCTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	130499160	130502390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130499181_130502246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023831	chr7	+	743	2	ISM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	30602	162	30602	-162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATATGACTCCCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	130510063	130513212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130510156_130512561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023832	chr7	+	693	1	ISM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	45197	1667	33221	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTGTCCAGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	130512682	130513375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_130512700_130513400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023833	chr7	+	1132	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	130972872	130989568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023834	chr7	-	3629	2	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	16652	-2	16652	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTTTTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	130994147	130990376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130991448_130991589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023835	chr7	-	2898	3	ISM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	12243	1375	12243	343	internal_fragment	TRUE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGGCAACACTTTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	130998556	130991753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_130994310_130995483_130995667_130998397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023836	chr7	+	1337	1	Genic_Genomic	ENSMUSG00000030861.16	novel	NA	NA	NA	NA	23160	22	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACCTTATGTTTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	131049358	131050695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_131049400_131050700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023837	chr7	+	622	1	ISM	ENSMUSG00000050100.15	ENSMUST00000183219.8	1546	3	7195	0	1907	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGGGATGGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	131157696	131158318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_131157700_131158300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023838	chr7	+	1261	4	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	6004	274	5516	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTCTTGTGGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	131167954	131173347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_131168081_131169912_131170091_131170233_131170451_131172607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023839	chr7	+	733	2	ISM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	8274	507	7786	221	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGAGGCCTGGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	131170224	131173114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_131170451_131172607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023840	chr7	+	777	1	Genic_Genomic	ENSMUSG00000066979.7	novel	NA	NA	NA	NA	10408	2	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGGTGTGTTACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	131172846	131173623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_131172800_131173600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023841	chr7	-	1634	1	ISM	ENSMUSG00000030930.15	ENSMUST00000077472.10	5041	8	79301	0	79301	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGCCAGTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	131839142	131837508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_131837500_131839100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023842	chr7	-	677	1	Genic_Genomic	ENSMUSG00000030934.10	novel	NA	NA	NA	NA	11953	3	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGAATCTATTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	132159880	132159203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_132159200_132159900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023843	chr7	-	877	3	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	15535	233	9241	-233	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACTAAATTACACTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	132162592	132159439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_132160060_132161374_132161520_132162480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023844	chr7	-	413	4	ISM	ENSMUSG00000030934.10	ENST00000445444.1	615	5	8192	-1	8192	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCCTCCCCTTGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	132163641	132159978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_132160060_132161374_132161464_132162480_132162595_132163512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023845	chr7	-	530	4	ISM	ENSMUSG00000030934.10	ENST00000445444.1	615	5	5	1395	5	-1395	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCCACAGCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	132171828	132161374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_132161464_132162480_132162595_132163512_132163642_132171630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023846	chr7	-	650	4	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	6254	6767	-40	-5994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAACCATCCCATATAAC	NA	NA	NA	NA	NA	NA	NA	NA	132171873	132165973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_132166064_132168497_132168594_132168794_132169020_132171634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023847	chr7	+	417	3	ISM	ENSMUSG00000030946.14	ENSMUST00000106170.8	999	7	19813	29013	0	-29013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGCTGCCCCAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	132232208	132243325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_132232399_132235729_132235884_132243252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023848	chr7	+	407	4	ISM	ENSMUSG00000030946.14	ENST00000368839.1	598	5	3522	0	3522	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTTCAGAGACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	132235730	132307417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_132235884_132243252_132243317_132244215_132244309_132307320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023849	chr7	+	106	1	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	75103	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTTCAGAGACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	132307311	132307417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_132307300_132307400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023850	chr7	-	867	4	ISM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	1963	0	1906	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	132452439	132429185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023851	chr7	+	1638	3	ISM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	19327	616	19327	-616	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTACGCTTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	132480280	132486224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_132480343_132482495_132482611_132484763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023852	chr7	+	1581	1	ISM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	24306	0	24306	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATATTTTAGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	132485259	132486840	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_132485300_132486800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023853	chr7	-	435	2	ISM	ENSMUSG00000030970.17	ENSMUST00000169570.8	3604	9	25139	459	25139	-130	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGGTATCTGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	132591838	132589765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_132590081_132591718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023854	chr7	-	284	1	ISM	ENSMUSG00000030979.14	ENSMUST00000106144.8	1045	7	16642	0	16541	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGTTGCTTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	133294146	133293862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_133293900_133294100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023855	chr7	-	143	2	ISM	ENSMUSG00000030979.14	ENSMUST00000106144.8	1045	7	7175	8680	7074	-8680	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCGGGCGTGGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	133303613	133302542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_133302640_133303567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023856	chr7	-	159	2	ISM	ENSMUSG00000030979.14	ENSMUST00000106144.8	1045	7	-61	10289	-51	-10289	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTCTTTTAGAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	133310849	133304151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_133304199_133310737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023857	chr7	+	913	5	ISM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	5627	-1	5627	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAAGTGTTCATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	133316688	133322875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023858	chr7	+	441	1	NIC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	11372	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTGTTCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	133322433	133322874	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_133322400_133322900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023859	chr7	-	2389	1	ISM	ENSMUSG00000054555.12	ENSMUST00000067680.11	7675	23	339510	0	339510	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGTGTGTTCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	133487316	133484927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_133484900_133487300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023860	chr7	+	161	2	ISM	ENSMUSG00000041836.11	ENST00000471218.5	351	4	11	6936	11	-6936	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTACACTGGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	135253489	135253893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_135253576_135253818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023861	chr7	+	196	2	ISM	ENSMUSG00000041836.11	ENST00000471218.5	351	4	340	5081	153	-5081	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCAATGTGAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	135253818	135255748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_135253893_135255626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023862	chr7	+	120	2	ISM	ENSMUSG00000041836.11	ENST00000471218.5	351	4	2228	-20	2041	20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATACCCCAACATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135255706	135260849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_135255759_135260781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023863	chr7	-	503	1	ISM	ENSMUSG00000010476.15	ENSMUST00000169486.9	4994	16	120262	8	73355	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAATGAATTGGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	136795912	136795409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_136795400_136795900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023864	chr7	-	558	3	ISM	ENSMUSG00000010476.15	ENST00000440978.2	5109	17	115872	2342	68982	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCACCGTTTTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	136800285	136797751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_136798132_136799159_136799273_136800220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023865	chr7	-	477	3	ISM	ENSMUSG00000010476.15	ENSMUST00000210774.2	2994	16	113424	3341	66976	-2698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACAGAAGAGCGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	136802291	136800310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_136800419_136800822_136801012_136802111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023866	chr7	-	566	2	ISM	ENSMUSG00000010476.15	ENSMUST00000210774.2	2994	16	-201	118276	-201	-117633	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTACACCGGCGATCG	NA	NA	NA	NA	NA	NA	NA	NA	136915916	136915245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_136915404_136915508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023867	chr7	+	146	2	ISM	ENSMUSG00000031068.9	ENSMUST00000211496.2	3440	10	18	21940	18	-21940	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATGAACGATGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	137039401	137046754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_137039501_137046707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023868	chr7	+	112	2	ISM	ENSMUSG00000031068.9	ENSMUST00000211496.2	3440	10	15096	13462	15096	-13462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTACTAATGAACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	137054479	137055232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_137054501_137055141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023869	chr7	+	128	2	ISM	ENSMUSG00000031068.9	ENSMUST00000211496.2	3440	10	15883	7792	15883	-7792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTGATATCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	137055266	137060902	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_137055344_137060851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023870	chr7	+	110	2	ISM	ENSMUSG00000031068.9	ENSMUST00000211496.2	3440	10	21578	7438	21578	-7438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTAGAGGAAAGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	137060961	137061256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_137061025_137061209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023871	chr7	+	95	2	ISM	ENSMUSG00000031068.9	ENSMUST00000211496.2	3440	10	21844	5569	21844	-5569	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAGGTAAAGAACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	137061227	137063125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_137061272_137063074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023872	chr7	+	98	2	ISM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	26839	619	26798	-619	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAGTGAACATAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	137066181	137069704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_137066237_137069661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023873	chr7	-	614	1	Genic_Genomic	ENSMUSG00000078566.9	novel	NA	NA	NA	NA	7383	1	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGCTGTACTGGCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	138493177	138492563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_138492600_138493200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023874	chr7	-	905	4	ISM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	11427	561	752	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTAGAAGCTAAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	138499808	138493125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023875	chr7	-	243	2	NIC	ENSMUSG00000078566.9	novel	482	4	NA	NA	4116	-1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGGGTAAGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	138496444	138496117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_138496255_138496338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023876	chr7	-	378	4	ISM	ENSMUSG00000078566.9	ENSMUST00000130500.8	719	5	10679	196	15	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCGTTATGAAGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	138500545	138496205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_138496259_138496338_138496446_138499724_138499807_138500409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023877	chr7	-	344	3	ISM	ENSMUSG00000078566.9	ENST00000597863.1	482	4	9	209	9	-209	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTCTTAGTCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	138500551	138496325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_138496446_138499724_138499807_138500409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023878	chr7	+	336	2	ISM	ENSMUSG00000015980.15	ENSMUST00000016124.15	2113	11	229	28020	-55	-14049	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCCAGATGCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	138793132	138794875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_138793184_138794590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023879	chr7	+	376	2	ISM	ENSMUSG00000015980.15	ENSMUST00000016124.15	2113	11	13028	15030	12744	-1059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACCTCCCTTCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	138805931	138807865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_138806278_138807835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023880	chr7	+	263	1	ISM	ENSMUSG00000015980.15	ENSMUST00000016124.15	2113	11	29729	0	29445	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTCTTCTGTCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	138822632	138822895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_138822600_138822900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023881	chr7	+	238	1	ISM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	19256	0	19251	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGCTTCTCTCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	138847653	138847891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_138847700_138847900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023882	chr7	-	685	4	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	26744	8763	26744	-8763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGACCTCAAGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	139586955	139584725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_139584893_139585182_139585364_139585927_139586074_139586764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023883	chr7	-	721	4	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	26158	9218	26158	-9218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTCACTTTGTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	139587541	139585180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_139585364_139585927_139586074_139586764_139586955_139587339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023884	chr7	-	840	5	ISM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	2635	10861	2635	-10861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACTTCGAGATCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	139611064	139586823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023885	chr7	+	750	4	ISM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	865	0	865	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	139617189	139620515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_139617335_139617428_139617554_139619238_139619359_139620155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023886	chr7	-	239	1	Genic_Genomic	ENSMUSG00000025466.20	novel	NA	NA	NA	NA	2696	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTGGTGAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	139679620	139679381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_139679400_139679600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023887	chr7	-	310	2	ISM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	2489	1	2451	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCTTGTGGTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	139679865	139679383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_139679620_139679791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023888	chr7	-	668	1	ISM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	10099	0	10099	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	139686290	139685622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_139685600_139686300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023889	chr7	-	1058	5	ISM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	4684	0	4684	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	139691705	139685622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023890	chr7	+	945	4	FSM	ENSMUSG00000025464.16	ENST00000480071.2	942	4	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCCACCTCCACTATAT	NA	NA	NA	NA	NA	NA	NA	NA	139705653	139711672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139711559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023891	chr7	+	272	1	ISM	ENSMUSG00000025481.13	ENSMUST00000211372.2	688	4	2423	0	2398	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAATCTGAACCTATCATT	NA	NA	NA	NA	NA	NA	NA	NA	140417607	140417879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140417600_140417900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023892	chr7	-	2269	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTCTCTATGTCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	140437022	140433305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023893	chr7	+	481	4	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	1393	1320	1393	-1320	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTTATGTTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	140438773	140441107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140438868_140439351_140439503_140440789_140440886_140440967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023894	chr7	+	470	3	ISM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	3827	0	3827	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGCTGGGGAGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	140441207	140442427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140441354_140441752_140441873_140442223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023895	chr7	-	870	5	FSM	ENSMUSG00000025486.18	ENST00000524564.5	866	5	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACACGTTTACAAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	140457800	140443896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_140443997_140444828_140445098_140449401_140449564_140456266_140456368_140457562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023896	chr7	-	651	4	ISM	ENSMUSG00000025486.18	ENST00000532956.5	834	5	258	-1	-5	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACACGTTTACAAACATGA	NA	NA	NA	NA	NA	NA	NA	NA	140457802	140443896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140443997_140444887_140445098_140456266_140456368_140457562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023897	chr7	-	823	5	NNC	ENSMUSG00000025486.18	novel	866	5	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACACGTTTACAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	140457758	140443897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140443997_140444832_140445098_140449401_140449564_140456266_140456368_140457562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023898	chr7	-	522	3	ISM	ENSMUSG00000025486.18	ENST00000532956.5	834	5	6	12366	6	-12366	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACCTCAGGAAATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	140458054	140456263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140456368_140457562_140457796_140457869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023899	chr7	-	314	2	FSM	ENSMUSG00000025488.10	ENSMUST00000026561.10	360	2	46	0	46	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCTCGTGCAGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	140480313	140478857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_140479003_140480144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023900	chr7	+	847	3	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	15	3140	15	-3140	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTACATCCTACCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	140522289	140523622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140522479_140522898_140523110_140523175
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023901	chr7	+	627	3	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	779	2084	779	-2084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGAATGGGGCCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	140523053	140524678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140523110_140523175_140523626_140524557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023902	chr7	+	600	6	ISM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	3091	0	3091	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTCTTCCGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140525365	140526762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140525441_140525868_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023903	chr7	+	458	1	ISM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	5626	0	4845	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGATGGATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	140527119	140527577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140527100_140527600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023904	chr7	-	767	2	FSM	ENSMUSG00000025489.6	ENSMUST00000026562.6	765	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGGCTCTTCCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	140530205	140528869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_140529362_140529930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023905	chr7	-	660	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACTCACTGTTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	140535903	140534747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_140535087_140535582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023906	chr7	-	643	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535895	140534749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140535076_140535578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023907	chr7	-	650	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535900	140534749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140535082_140535582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023908	chr7	-	659	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535905	140534749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140535082_140535578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023909	chr7	-	612	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	44	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535856	140534749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140535082_140535576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023910	chr7	-	621	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535877	140534749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140535082_140535588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023911	chr7	-	647	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535898	140534749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140535087_140535588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023912	chr7	-	589	2	NNC	ENSMUSG00000060591.10	novel	655	2	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140535830	140534749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140535087_140535578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023913	chr7	+	487	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	204	45	-9	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGTGGACTCAATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	140548156	140549693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_140548352_140549401
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023914	chr7	+	505	2	FSM	ENSMUSG00000025491.15	ENST00000681198.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGACTTTCTGCCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	140548165	140549720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_140548357_140549406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023915	chr7	+	444	2	FSM	ENSMUSG00000025491.15	ENST00000680209.1	538	2	2	92	2	-92	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTAGACTTAGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	140548167	140549628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_140548352_140549368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023916	chr7	+	340	1	NIC	ENSMUSG00000025491.15	novel	882	3	NA	NA	1233	0	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTCCTGTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	140549398	140549738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_140549400_140549700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023917	chr7	-	684	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	-1	-5	-1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTATTCCTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	140590684	140589493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_140589803_140590309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023918	chr7	-	321	1	Genic_Genomic	ENSMUSG00000025492.7	novel	NA	NA	NA	NA	869	5	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTATTCCTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	140589814	140589493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_140589500_140589800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023919	chr7	-	675	2	NNC	ENSMUSG00000025492.7	novel	678	2	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCTTTTATTCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	140590683	140589496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140589798_140590309
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023920	chr7	-	569	2	NNC	ENSMUSG00000025492.7	novel	678	2	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGCTTTTATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	140590575	140589498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140589798_140590305
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023921	chr7	-	396	2	NNC	ENSMUSG00000025492.7	novel	678	2	NA	NA	276	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGCTTTTATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	140590407	140589498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_140589803_140590315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023922	chr7	-	455	1	ISM	ENSMUSG00000059108.5	ENSMUST00000209328.2	678	3	1765	6	749	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATTGTGGTGAGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	140596072	140595617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140595600_140596100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023923	chr7	-	473	2	FSM	ENSMUSG00000059108.5	ENSMUST00000081924.5	663	2	14	176	14	-176	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAATGGACTACTAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	140596807	140595794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_140596073_140596612
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023924	chr7	-	526	4	ISM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	3803	0	3803	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGACCTTCACAGATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	140684495	140683017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140683148_140683904_140684058_140684154_140684298_140684395
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023925	chr7	+	832	3	ISM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	23371	1673	23371	-1673	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCAAAGTGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	140734569	140735846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140734616_140734723_140734910_140735246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023926	chr7	+	708	1	Genic_Genomic	ENSMUSG00000025495.16	novel	NA	NA	NA	NA	25626	13	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTGTTGTAGAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	140736824	140737532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_140736800_140737500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023927	chr7	-	245	1	Genic_Genomic	ENSMUSG00000038650.16	novel	NA	NA	NA	NA	8124	5	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGTCGTTCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	140740478	140740233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_140740200_140740500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023928	chr7	-	868	5	ISM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	5471	-4	5471	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTTGTCGTTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	140743131	140740234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023929	chr7	-	790	5	ISM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	4049	2557	4049	-2555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCCTGGCTGTCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	140744553	140742795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023930	chr7	-	287	3	ISM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	1912	3832	1912	-3830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGGCTGTGGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	140746690	140744070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140744092_140744416_140744588_140746595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023931	chr7	-	215	2	ISM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	7	6356	7	-6354	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCAACCTTGGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	140748595	140746594	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140746701_140748486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023932	chr7	-	391	2	ISM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	1713	313	648	-312	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCCTGCAGTCAGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	140772205	140771151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140771381_140772043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023933	chr7	+	1315	4	ISM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	1138	0	1104	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	140796910	140798571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140797626_140797798_140797931_140798002_140798082_140798182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023934	chr7	+	1500	3	FSM	ENSMUSG00000025505.17	ENSMUST00000132061.2	667	3	256	-1089	256	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTGTCTTCATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	140913549	140917069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_140913645_140913923_140914017_140915757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023935	chr7	+	1314	1	NIC	ENSMUSG00000025505.17	novel	1805	4	NA	NA	2462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTGTCTTCATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	140915755	140917069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_140915800_140917100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023936	chr7	+	657	5	ISM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	8	1207	8	-1205	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCTTTCAGGTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	140972119	140981674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023937	chr7	+	431	4	NNC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	3853	-1312	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCGGGCGTGACGCTC	NA	NA	NA	NA	NA	NA	NA	NA	140975964	140981567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_140976082_140978407_140978516_140980200_140980333_140981493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023938	chr7	+	615	4	ISM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	6295	897	6295	-897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGCCAAGGGTGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	140978406	140981982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140978516_140980200_140980333_140981493_140981670_140981784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023939	chr7	+	545	4	ISM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	8197	636	8197	-636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCCTGAGTGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	140980308	140982243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140980333_140981493_140981670_140981784_140981983_140982096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023940	chr7	+	625	4	ISM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	9502	0	9502	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	NA	NA	NA	NA	NA	NA	NA	NA	140981613	140982881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_140981670_140981784_140981983_140982096_140982243_140982656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023941	chr7	-	1009	1	Genic_Genomic	ENSMUSG00000051007.16	novel	NA	NA	NA	NA	5268	1	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTACACATTGGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	140988714	140987705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_140987700_140988700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023942	chr7	-	1090	2	ISM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	4936	193	4869	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCGTGTCTCACACCCGG	NA	NA	NA	NA	NA	NA	NA	NA	140989113	140987899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_140988878_140989001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023943	chr7	-	164	2	ISM	ENSMUSG00000019082.19	ENSMUST00000106007.10	2546	10	1863	2296	1863	-2296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAAGATGCAGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	141012644	141011957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141012053_141012575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023944	chr7	-	160	2	ISM	ENSMUSG00000019082.19	ENSMUST00000106007.10	2546	10	374	4182	374	-4182	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAATGGCCAGCGCATG	NA	NA	NA	NA	NA	NA	NA	NA	141014133	141013843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141013939_141014068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023945	chr7	+	967	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTGCTCTGCTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	141027281	141031500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023946	chr7	+	431	2	ISM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	40	3545	40	-3310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTTGGACCCGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	141027322	141027953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141027621_141027820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023947	chr7	+	739	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	-119	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCACTGCTCTGCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	141027505	141031499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031147
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023948	chr7	+	418	4	FSM	ENSMUSG00000025508.14	ENSMUST00000106003.2	449	4	31	0	31	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	141027793	141031263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_141027945_141028638_141028688_141030916_141031016_141031144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023949	chr7	-	425	2	Antisense	novelGene_ENSMUSG00000025508.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTTGCCAACACCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	141031488	141030930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr7_-_141031010_141031142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023950	chr7	+	372	1	Genic_Genomic	ENSMUSG00000025508.14	novel	NA	NA	NA	NA	3366	2	mono-exon	FALSE	NA	NA	NA	NA	NA	494	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTGCTCTGCTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	141031128	141031500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_141031100_141031500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023951	chr7	+	401	2	NNC	ENSMUSG00000025508.14	novel	449	4	NA	NA	3388	1299	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGCCAGGCAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	141031150	141032797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_141031500_141032745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023952	chr7	+	749	1	ISM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	4797	0	4788	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTATCCTGTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	141039907	141040656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141039900_141040700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023953	chr7	+	401	1	ISM	ENSMUSG00000048200.13	ENSMUST00000053670.12	1698	10	5119	0	2802	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGCTCTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	141046125	141046526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141046100_141046500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023954	chr7	+	683	5	ISM	ENSMUSG00000025510.15	ENST00000528011.2	764	6	202	-1	202	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGATGTCAGGCCGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	141049370	141050613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141049571_141049849_141049925_141050033_141050139_141050222_141050376_141050463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023955	chr7	+	1259	4	ISM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	1110	7	676	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAGCACTCGAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	141049844	141051378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141049925_141050033_141050139_141050222_141050382_141050463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023956	chr7	+	452	1	ISM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	3628	1	1765	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCGAATCAGCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	141050933	141051385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141050900_141051400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023957	chr7	-	1675	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	0	-25	0	25	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCCTTAGGCTAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	141055045	141051747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_141053318_141054940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023958	chr7	-	1642	2	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	19	23	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGCCTTAGGCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	141055026	141051749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_141053318_141054952
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023959	chr7	+	1455	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	141055163	141073340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023960	chr7	+	371	4	ISM	ENSMUSG00000025511.16	ENSMUST00000117634.2	1281	8	23	2617	23	-2149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGCTCTTCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	141056335	141070717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141056392_141062399_141062480_141069464_141069657_141070674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023961	chr7	+	360	3	ISM	ENSMUSG00000025511.16	ENST00000346501.8	677	6	7106	1091	7106	-1048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGAGCTTTTCCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	141069503	141071818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141069657_141070674_141070750_141071686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023962	chr7	+	334	4	ISM	ENSMUSG00000025511.16	ENST00000346501.8	677	6	8313	33	8313	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTTCTCTGCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	141070710	141072876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141070750_141071686_141071819_141071892_141071977_141072797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023963	chr7	+	385	1	ISM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	17797	6	10552	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAACTGAGGAAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	141072949	141073334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141072900_141073300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023964	chr7	-	702	1	ISM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	45979	0	45967	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGGTGTCTGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	141073750	141073048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141073000_141073800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023965	chr7	-	736	2	ISM	ENSMUSG00000025512.16	ENSMUST00000118694.8	3910	11	43391	2316	43391	-2316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATGAGATCAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	141076326	141075366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141076060_141076283
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023966	chr7	+	601	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	-15	32811	0	-32811	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGCCGTGAGATGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	141142085	141178749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023967	chr7	+	375	3	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	35335	29327	35335	-29327	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATCTCGTGTGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	141177435	141182233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141177529_141178614_141178809_141182145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023968	chr7	+	454	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	36595	21732	36595	-21732	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTTCCCCGAAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	141178695	141189828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141178809_141182145_141182276_141184821_141184924_141189719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023969	chr7	+	481	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	40044	20176	40044	-20176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATGACAGGTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	141182144	141191384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141182276_141184821_141184924_141189719_141189829_141191245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023970	chr7	+	319	2	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	49146	18850	49146	-18850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCCTTGTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	141191246	141192710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141191397_141192541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023971	chr7	+	494	3	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	50438	12013	50438	-12013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGGGTGTCTTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	141192538	141199547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141192711_141194111_141194250_141199363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023972	chr7	+	650	4	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	52013	10623	52013	-10623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGGCTCTGGGTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	141194113	141200937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141194250_141199363_141199547_141200384_141200483_141200704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023973	chr7	+	402	3	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	58323	10422	58323	-10422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAGCGAAGCATCGATGT	NA	NA	NA	NA	NA	NA	NA	NA	141200423	141201138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141200483_141200704_141200937_141201027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023974	chr7	+	452	3	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	58724	7864	58724	-7864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGTTTCTGAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	141200824	141203696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141200937_141201027_141201202_141203530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023975	chr7	+	529	3	ISM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	68129	0	68129	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACGAAAGTGGAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	141210229	141211560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141210268_141210349_141210485_141211204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023976	chr7	+	360	1	NIC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	69100	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACGAAAGTGGAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	141211200	141211560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_+_141211200_141211600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023977	chr7	+	327	1	ISM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	70512	0	70497	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGTGGTTTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	141212597	141212924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141212600_141212900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023978	chr7	-	677	5	ISM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	5584	1055	5584	-1055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTGGTGGGTGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	141232782	141230592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141230621_141230841_141230999_141231664_141231905_141232014_141232201_141232716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023979	chr7	-	2755	1	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	18150	0	17971	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	141438074	141435319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141435300_141438100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023980	chr7	-	2927	3	ISM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	11644	305	11465	-305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACATGGCCAGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	141444580	141435624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141438319_141443243_141443335_141444438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023981	chr7	-	302	2	ISM	ENSMUSG00000025139.15	ENST00000525159.5	525	4	9523	1190	9420	-1190	internal_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCACTGTCCGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	141446625	141444438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141444592_141446476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023982	chr7	-	283	2	ISM	ENSMUSG00000025139.15	ENST00000525159.5	525	4	3	3228	3	-3228	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTCTTAGTTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	141456145	141446476	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141446627_141456012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023983	chr7	+	987	6	ISM	ENSMUSG00000053046.17	ENST00000531197.5	3170	19	13	17465	0	-13226	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCCACTTGCCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	141503487	141539516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141503917_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023984	chr7	+	582	5	ISM	ENSMUSG00000053046.17	ENST00000544817.5	1625	8	-72	4724	-72	-354	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTGGTGGAGACCATCC	NA	NA	NA	NA	NA	NA	NA	NA	141546847	141552388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023985	chr7	+	935	4	ISM	ENSMUSG00000053046.17	ENST00000531197.5	3170	19	48639	202	5194	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTCTCTGTTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	141552113	141556779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141552296_141552369_141552460_141552656_141552752_141556211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023986	chr7	+	801	3	ISM	ENSMUSG00000053046.17	ENST00000544817.5	1625	8	5735	245	5735	-114	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGTGGGTCCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	141552654	141556867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141552752_141554578_141554627_141556211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023987	chr7	+	719	1	ISM	ENSMUSG00000053046.17	ENST00000308219.13	4118	19	52921	862	9476	2	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATATATATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	141556395	141557114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141556400_141557100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023988	chr7	-	696	1	ISM	ENSMUSG00000025147.8	ENSMUST00000211000.2	1646	6	51804	15	16830	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCCTCTCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	141562982	141562286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141562300_141563000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023989	chr7	-	901	3	ISM	ENSMUSG00000025147.8	ENSMUST00000209732.2	977	5	9904	-332	9904	332	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGGGGCTTGCCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	141569908	141562632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141563316_141563989_141564115_141569815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023990	chr7	-	1062	2	ISM	ENSMUSG00000045777.15	ENSMUST00000084412.6	1158	3	947	0	947	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGCCTCTGTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	141925049	141909244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141909852_141924594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023991	chr7	-	152	1	ISM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	11306	670	6809	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACTCTAACTTGCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	141930469	141930317	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141930300_141930500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023992	chr7	-	224	2	ISM	ENSMUSG00000007891.17	ENST00000637915.1	1003	7	6633	0	6633	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTACTCTAACTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	141930645	141930318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_141930467_141930569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023993	chr7	-	1165	6	FSM	ENSMUSG00000007891.17	ENST00000438213.6	1174	6	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTACTCTAACTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	141937269	141930318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_141930476_141930569_141930669_141930762_141931193_141934502_141934696_141936276_141936448_141937154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023994	chr7	-	1012	7	FSM	ENSMUSG00000007891.17	ENST00000236671.7	1012	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTACTCTAACTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	141937278	141930318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934696_141936276_141936448_141937154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023995	chr7	+	425	3	ISM	ENSMUSG00000031097.16	ENSMUST00000149529.8	768	7	1238	-1	1238	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGGCCTCGCTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	141997304	141998106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_141997398_141997642_141997820_141997951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023996	chr7	+	635	1	Genic_Genomic	ENSMUSG00000018819.11	novel	NA	NA	NA	NA	17222	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTCTGTTCCTGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	142047971	142048606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_142048000_142048600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023997	chr7	+	290	2	ISM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	17	5619	17	-5619	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGAGGCCCAAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	142086765	142088865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142086932_142088741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023998	chr7	+	172	2	ISM	ENSMUSG00000037772.14	ENSMUST00000210662.2	736	5	1230	4622	1230	-4622	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCGTGCGCACACGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	142088748	142089862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142088865_142089806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000023999	chr7	+	209	2	ISM	ENSMUSG00000037772.14	ENSMUST00000210662.2	736	5	3488	91	3488	-91	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGACCTATGACAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	142091006	142094393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142091078_142094255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024000	chr7	-	481	1	Genic_Genomic	ENSMUSG00000000031.17	novel	NA	NA	NA	NA	2135	1	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGTGGACTTCAATATA	NA	NA	NA	NA	NA	NA	NA	NA	142129745	142129264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_142129300_142129700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024001	chr7	-	679	3	ISM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	1612	158	1612	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGGCCGTGTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	142130268	142129423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_142129852_142129939_142130068_142130145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024002	chr7	-	815	4	ISM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	889	670	889	-670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGGCACCCTTTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	142130991	142129935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_142130068_142130145_142130268_142130349_142130485_142130565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024003	chr7	-	172	1	ISM	ENSMUSG00000000215.12	ENSMUST00000105931.8	472	3	858	0	706	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTGTATGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	142232564	142232392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_142232400_142232600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024004	chr7	-	249	2	FSM	ENSMUSG00000000215.12	ENSMUST00000105933.8	552	2	306	-3	141	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTGTATGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	142233129	142232392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_142232596_142233083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024005	chr7	-	244	2	ISM	ENSMUSG00000000215.12	ENSMUST00000105934.8	480	3	20	704	20	-647	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACCCACAAGGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	142253227	142233096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_142233285_142253171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024006	chr7	+	912	7	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	-2	701	-2	-701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCACAGGGTCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	142606473	142620970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024007	chr7	+	1207	7	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	9753	-1	9753	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGACCTCTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	142616228	142621672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024008	chr7	+	603	3	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	13913	218	13913	-218	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGAGGGCCATGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	142620388	142621453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142620500_142620883_142620971_142621048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024009	chr7	+	600	2	ISM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	14391	127	14391	-127	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGTTTGTAAGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	142620866	142621544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142620971_142621048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024010	chr7	+	633	1	Genic_Genomic	ENSMUSG00000037706.18	novel	NA	NA	NA	NA	14572	9	mono-exon	FALSE	NA	NA	NA	NA	NA	1371	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCTGTGCTAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	142621047	142621680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_+_142621000_142621700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024011	chr7	+	206	2	ISM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	21	1252	21	-1192	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACATAGTGGAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	142623125	142623572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142623251_142623491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024012	chr7	+	1015	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	59	290	59	-230	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGAAGGCTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	142623163	142624534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_+_142623251_142623491_142623558_142623672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024013	chr7	+	181	2	ISM	ENSMUSG00000045752.14	ENSMUST00000105920.8	895	4	385	1069	-14	-1009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCGTCTCCCTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	142623489	142623755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142623588_142623672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024014	chr7	+	876	1	ISM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	969	0	451	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	142623954	142624830	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_142624000_142624800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024015	chr7	-	685	1	NIC	ENSMUSG00000037664.14	novel	1888	4	NA	NA	1621	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTAGTCTTCTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	143012760	143012075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_143012100_143012800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024016	chr7	-	1882	4	FSM	ENSMUSG00000037664.14	ENST00000430149.3	1871	4	-2	-9	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTTGTAGTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143014729	143012078	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_143012759_143012848_143012988_143013495_143013704_143013874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024017	chr7	-	653	3	FSM	ENSMUSG00000037664.14	ENST00000647251.1	640	3	-1	-12	-1	12	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAGAACGAAGGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	143014382	143012471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_143012754_143012848_143012988_143014150
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024018	chr7	-	629	3	NNC	ENSMUSG00000037664.14	novel	640	3	NA	NA	9	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAAAATGTAGAACGAAG	NA	NA	NA	NA	NA	NA	NA	NA	143014372	143012479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_143012754_143012848_143012988_143014156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024019	chr7	-	364	3	ISM	ENSMUSG00000037664.14	ENST00000414822.8	1872	4	1051	628	699	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGACGATGGAAGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	143013682	143012715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143012754_143012848_143012988_143013495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024020	chr7	-	665	1	Genic_Genomic	ENSMUSG00000059119.10	novel	NA	NA	NA	NA	34586	1	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTTTTTTTGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	143067979	143067314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_143067300_143068000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024021	chr7	-	670	3	NNC	ENSMUSG00000059119.10	novel	2259	15	NA	NA	24552	-570	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGGGGTGGGTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	143078013	143067894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_143068375_143074120_143074178_143077880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024022	chr7	-	509	5	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	24112	771	24112	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGGTGGACCGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	143078453	143068095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024023	chr7	-	625	1	Genic_Genomic	ENSMUSG00000010755.18	novel	NA	NA	NA	NA	28664	4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTAGCCTTCGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	143111587	143110962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_143111000_143111600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024024	chr7	-	637	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	40845	-253	27303	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGAGCACACACTGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	143112948	143111190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143111744_143112864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024025	chr7	-	136	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	37021	4159	23479	-4159	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGGTTAGTAAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	143116772	143115602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143115664_143116697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024026	chr7	-	133	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	34991	5284	21449	-5284	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGGGTCCGGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	143118802	143116727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143116779_143118720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024027	chr7	-	127	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	31698	7276	18156	-7276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCCCCATGCTGTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	143122095	143118719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143118803_143122051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024028	chr7	-	143	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	31034	10624	17492	6189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAACCAACCTGAACGTAA	NA	NA	NA	NA	NA	NA	NA	NA	143122759	143122067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143122121_143122669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024029	chr7	-	205	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	30117	11693	16575	5120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGAGCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	143123676	143123136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143123235_143123569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024030	chr7	-	160	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	29957	12150	16415	4663	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAGTATGAAAAATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	143123836	143123593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143123674_143123756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024031	chr7	-	154	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	29453	12351	15911	4462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATCACCATTAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	143124340	143123794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143123887_143124278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024032	chr7	-	140	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	28533	12864	14991	3949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGACAATGAGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	143125260	143124307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143124408_143125220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024033	chr7	-	497	4	ISM	ENSMUSG00000010755.18	ENST00000603171.1	673	6	1715	0	1715	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAGGTAAGAGCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	143138536	143128256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143128372_143129654_143129744_143130322_143130464_143138384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024034	chr7	-	433	4	ISM	ENSMUSG00000010755.18	ENST00000603171.1	673	6	715	1446	715	-1446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAAATTGTGAACTTCG	NA	NA	NA	NA	NA	NA	NA	NA	143139536	143129702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143129744_143130322_143130464_143138384_143138535_143139435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024035	chr7	-	161	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	12861	28735	-681	-11922	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACATCACAGACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	143140932	143140178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143140249_143140841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024036	chr7	-	158	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	11498	29396	-2044	-12583	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGATGCTGGGGATCG	NA	NA	NA	NA	NA	NA	NA	NA	143142295	143140839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143140931_143142228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024037	chr7	-	139	2	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	23	30790	23	-13977	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGGTAAGAAAGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	143153770	143142233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143142321_143153718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024038	chr7	-	1621	1	FSM	ENSMUSG00000010751.16	ENSMUST00000171066.2	1780	1	159	0	159	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGCTTGAATTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	143190163	143188542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_143188500_143190200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024039	chr7	-	799	1	ISM	ENSMUSG00000037613.17	ENSMUST00000152703.2	1476	6	17460	0	17459	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTGTCCTCACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	143222149	143221350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143221400_143222100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024040	chr7	-	477	1	NIC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	26781	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTATTGATGTGTACG	NA	NA	NA	NA	NA	NA	NA	NA	143349797	143349320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_143349300_143349800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024041	chr7	+	728	1	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	18057	0	17436	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	143401419	143402147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_143401400_143402100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024042	chr7	+	871	4	ISM	ENSMUSG00000037541.23	ENST00000468619.6	927	6	25	103101	25	-103101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTGACCTCACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	143729425	143746267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_143729694_143733491_143733811_143740556_143740727_143746153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024043	chr7	-	918	1	Genic_Genomic	ENSMUSG00000031078.16	novel	NA	NA	NA	NA	34097	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGATCTTCTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	143990385	143989467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr7_-_143989500_143990400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024044	chr7	-	1695	4	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	30647	2	30647	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	143993835	143989471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024045	chr7	-	2507	1	ISM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	2639	0	2639	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGGTTTCTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	144133561	144131054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_144131100_144133600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024046	chr7	-	2486	2	NNC	ENSMUSG00000031077.8	novel	3903	2	NA	NA	316	-1093	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCAACTTGTGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	144135884	144132147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_-_144134590_144135840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024047	chr7	-	2773	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	36	1094	36	-1094	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCCAACTTGTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	144136164	144132148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_144134598_144135840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024048	chr7	+	1177	1	ISM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	1895	786	1797	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCAAAGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	144417017	144418194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_144417000_144418200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024049	chr7	+	522	1	ISM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	5478	0	5433	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGTCTGGGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	144474349	144474871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_144474300_144474900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024050	chr7	-	2101	1	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	7838	0	7745	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	144485768	144483667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_144483700_144485800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024051	chr7	-	2535	4	ISM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	1841	757	1748	-757	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTGTGATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	144491765	144484424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024052	chr7	-	166	1	NIC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	5604	3	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATCAAAGGAGGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	144487909	144487743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr7_-_144487700_144487900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024053	chr7	-	336	2	FSM	ENSMUSG00000070348.6	ENST00000536559.1	436	2	102	-2	102	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCATCAAAGGAGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	144493411	144487744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr7_-_144487902_144493232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024054	chr7	-	683	2	ISM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	28485	169	28485	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCTGTTTTATAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	144809263	144807828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_-_144808436_144809187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024055	chr7	+	1141	3	NNC	ENSMUSG00000031070.16	novel	2087	3	NA	NA	35	-707	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGATGGTGCGGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	144854599	144862379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr7_+_144854730_144857550_144857670_144861487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024056	chr7	+	974	1	ISM	ENSMUSG00000031070.16	ENSMUST00000033386.12	2087	3	7756	0	7685	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGCCCAGTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	144862320	144863294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr7_+_144862300_144863300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024057	chr8	-	723	1	Genic_Genomic	ENSMUSG00000069633.13	novel	NA	NA	NA	NA	9819	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3507826	3507103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_3507100_3507800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024058	chr8	+	1995	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3543141	3547208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_3543310_3545381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024059	chr8	+	1829	1	FSM	ENSMUSG00000047264.9	ENSMUST00000208423.2	2200	1	372	-1	372	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGTTACTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	3545380	3547209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_3545400_3547200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024060	chr8	+	160	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	5396	8015	5396	-8015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTCCTGCTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	3555852	3557217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3555944_3557148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024061	chr8	+	153	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	6770	7769	6770	-7769	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAATGGATCAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3557226	3557463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3557317_3557400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024062	chr8	+	102	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	7934	6484	7934	-6484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCCTGATTGTTACACC	NA	NA	NA	NA	NA	NA	NA	NA	3558390	3558748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3558428_3558683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024063	chr8	+	187	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	8229	6005	8229	-6005	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATGGTAAACTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	3558685	3559227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3558781_3559135
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024064	chr8	+	209	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	8678	4805	8678	-4805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCCTGTTGTCACGAG	NA	NA	NA	NA	NA	NA	NA	NA	3559134	3560427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3559236_3560319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024065	chr8	+	177	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	9870	4616	9870	-4616	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATCCTGCTGGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	3560326	3560616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3560427_3560539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024066	chr8	+	159	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	10147	4346	10147	-4346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTGACATTTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	3560603	3560886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3560690_3560813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024067	chr8	+	109	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	10401	3494	10401	-3494	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTGGCTGTCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	3560857	3561738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3560916_3561687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024068	chr8	+	178	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	11270	2489	11270	-2489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACAGCAGCCTGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	3561726	3562743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3561811_3562649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024069	chr8	+	140	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	12335	384	12335	-384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATCTGGCAAGTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	3562791	3564848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3562866_3564782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024070	chr8	+	127	2	ISM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	14383	166	14383	-166	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACTTTATCCCCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	3564839	3565066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3564914_3565013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024071	chr8	+	308	1	NIC	ENSMUSG00000004565.16	novel	4496	35	NA	NA	27079	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCAGCCTGGTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3593952	3594260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_3594000_3594300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024072	chr8	+	330	2	ISM	ENSMUSG00000004626.15	ENST00000612033.1	923	4	199	43729	199	-43729	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3619060	3640403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3619336_3640348
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024073	chr8	+	1063	3	ISM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	790	70	739	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACATGCCAGCCAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	3672340	3674165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3672429_3672592_3672626_3673223
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024074	chr8	+	952	1	ISM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	1733	0	1682	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTACTCTTCATTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	3673283	3674235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3673300_3674200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024075	chr8	+	293	3	ISM	ENSMUSG00000004626.15	ENST00000441779.6	1878	19	2145	8649	2145	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTGGGGAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3683300	3684133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3683368_3683814_3683927_3684019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024076	chr8	+	360	2	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	2525	8649	2525	1	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTGGGGAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3683680	3684133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3683927_3684019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024077	chr8	+	311	3	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	2714	8158	2714	492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACCAATCCCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	3683869	3684624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3683927_3684019_3684124_3684474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024078	chr8	+	480	4	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	3314	6841	3314	1809	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGCTTCGGGTTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3684469	3685941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3684624_3685445_3685531_3685615_3685747_3685831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024079	chr8	+	321	3	NNC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	3334	1592	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCGAACAGGACACATAC	NA	NA	NA	NA	NA	NA	NA	NA	3684489	3685724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_3684624_3685445_3685531_3685622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024080	chr8	+	366	4	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	4455	6363	4455	2287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAAGCTGGACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	3685610	3686419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3685747_3685831_3685940_3686180_3686239_3686355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024081	chr8	+	324	4	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	5059	5514	5059	3136	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCCAGGGATGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	3686214	3687268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3686239_3686355_3686422_3686493_3686575_3687115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024082	chr8	+	351	3	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	5956	1574	5956	-1574	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGTTGGGGGCCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	3687111	3691208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3687255_3689507_3689618_3691110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024083	chr8	+	293	3	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	8351	962	8351	-962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGCCCTGGAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	3689506	3691820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3689618_3691110_3691207_3691734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024084	chr8	+	302	3	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	9994	726	9994	-726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGCCAGAACTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	3691149	3692056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3691207_3691734_3691821_3691897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024085	chr8	+	383	3	ISM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	10577	0	10577	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCCACCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3691732	3692782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_3691821_3691897_3692056_3692645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024086	chr8	+	2072	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	20	454	20	-119	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACGCAGAGTCTGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	3726318	3730801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_3726604_3729014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024087	chr8	+	2650	1	FSM	ENSMUSG00000040236.5	ENSMUST00000207787.2	4411	1	2104	-343	-409	8	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATGTATGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3728613	3731263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_3728600_3731300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024088	chr8	+	390	2	FSM	ENSMUSG00000040236.5	ENST00000595985.1	386	2	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGATCCTGTTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	3729019	3729610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_3729093_3729293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024089	chr8	+	2124	1	ISM	ENSMUSG00000002948.20	ENSMUST00000062686.11	3525	12	7013	0	2510	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4295773	4297897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_4295800_4297900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024090	chr8	+	1318	4	ISM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	1200	-5	1186	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCCCCTTTGACATAAA	NA	NA	NA	NA	NA	NA	NA	NA	4304279	4306225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_4304402_4304550_4304620_4304991_4305374_4305480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024091	chr8	-	938	2	Antisense	novelGene_ENSMUSG00000011837.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCATGGGGACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	4306192	4305147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_4305371_4305477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024092	chr8	-	601	1	ISM	ENSMUSG00000048644.9	ENSMUST00000053252.9	1212	2	1014	0	1014	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTGAGTTAACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4308260	4307659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_4307700_4308300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024093	chr8	-	807	2	FSM	ENSMUSG00000048644.9	ENSMUST00000053252.9	1212	2	0	405	0	-405	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAATGCGGACACCTC	NA	NA	NA	NA	NA	NA	NA	NA	4309274	4308064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_4308648_4309050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024094	chr8	-	884	1	ISM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	39148	0	26354	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCCATTGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4336265	4335381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_4335400_4336300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024095	chr8	-	493	1	ISM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	36578	2961	23784	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4338835	4338342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_4338300_4338800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024096	chr8	-	1340	4	ISM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	7587	728	7587	-728	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAAATTTGCCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	4355032	4339070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024097	chr8	+	522	1	FSM	ENSMUSG00000109241.2	ENSMUST00000208558.2	408	1	-51	-63	-51	63	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAGGGGTCTTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	4441674	4442196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_4441700_4442200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024098	chr8	+	262	1	ISM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	38220	0	38220	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTGTCTTACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4581418	4581680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_4581400_4581700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024099	chr8	+	1691	3	FSM	ENSMUSG00000058748.10	ENSMUST00000073201.6	1401	3	-1	-289	-1	289	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATACTCAGGAGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	4675838	4679669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_4675967_4676163_4676225_4678167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024100	chr8	+	1715	1	Genic_Genomic	ENSMUSG00000058748.10	novel	NA	NA	NA	NA	2696	19	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTGGTGAGAAACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	4678535	4680250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_4678500_4680200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024101	chr8	+	1055	2	FSM	ENSMUSG00000097308.2	ENSMUST00000181337.2	1105	2	16	34	16	-34	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTACTCTACTATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	4728477	4738460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_4728567_4737494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024102	chr8	+	1001	1	NIC	ENSMUSG00000097308.2	novel	1105	2	NA	NA	9032	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCTCTTTTGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	4737493	4738494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_4737500_4738500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024103	chr8	-	707	4	ISM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	37661	0	37661	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAAATGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	4791893	4785975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024104	chr8	-	268	1	Genic_Genomic	ENSMUSG00000040459.12	novel	NA	NA	NA	NA	25180	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGAGGACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	8715341	8715073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_8715100_8715300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024105	chr8	-	316	2	ISM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	9052	2112	9052	-2112	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTTTTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	8731469	8717186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_8717417_8731383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024106	chr8	-	404	2	ISM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	297	18743	297	-18743	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAGCAGTTGCTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	8740224	8733817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_8733974_8739976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024107	chr8	+	1016	5	FSM	ENSMUSG00000031497.11	ENST00000430559.5	1017	5	4	-3	4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCTGGAGTGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	10056607	10085442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_10057161_10057249_10057335_10081309_10081423_10081505_10081657_10085328
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024108	chr8	-	489	1	ISM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	113915	0	113915	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTTTATTTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	11248911	11248422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_11248400_11248900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024109	chr8	-	1383	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	10	-1	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCTTGGGAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	11528700	11503516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_11504527_11528327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024110	chr8	+	737	4	ISM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	11888	0	11872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	11559455	11563287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_11559558_11560226_11560348_11561876_11561998_11562894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024111	chr8	+	509	2	NNC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	14292	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	11561875	11563287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_11561998_11562900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024112	chr8	+	394	1	NIC	ENSMUSG00000031505.12	novel	1307	10	NA	NA	15310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	11562893	11563287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_11562900_11563300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024113	chr8	+	1052	2	FSM	ENSMUSG00000045969.9	ENSMUST00000211007.2	2241	2	99	1090	99	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTTATGGTATCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	11605669	11612160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_11605979_11611417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024114	chr8	+	514	2	FSM	ENSMUSG00000045969.9	ENST00000375775.3	1031	2	-2	519	-2	-519	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAAACCTCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	11606257	11611818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_11606371_11611417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024115	chr8	+	1725	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	0	246	0	-245	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCACGTAATAAGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	11608428	11613004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_11608567_11611417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024116	chr8	+	1628	1	Genic_Genomic	ENSMUSG00000045969.9	novel	NA	NA	NA	NA	3196	1	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTATTTCCTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	11611624	11613252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_11611600_11613300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024117	chr8	-	677	1	ISM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	23497	1	23351	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	NA	NA	NA	NA	NA	NA	NA	11662260	11661583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_11661600_11662300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024118	chr8	-	684	3	ISM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	16480	989	16337	-989	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGCTGGAGCACACGAGC	NA	NA	NA	NA	NA	NA	NA	NA	11669274	11662572	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_11662948_11665814_11665911_11669061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024119	chr8	-	310	1	NIC	ENSMUSG00000031508.15	novel	5156	5	NA	NA	16248	2	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGTGGTGCGAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	11669363	11669053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_11669100_11669400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024120	chr8	-	514	3	ISM	ENSMUSG00000031508.15	ENST00000310847.8	758	4	2589	47	2589	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAGAATCTTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	11683022	11669102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_11669364_11678434_11678531_11682865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024121	chr8	-	440	3	ISM	ENSMUSG00000031508.15	ENST00000310847.8	758	4	-5	9394	-5	-9394	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACACCGAGTAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	11685616	11678449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_11678531_11682865_11683019_11685410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024122	chr8	+	159	2	ISM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	42105	34384	42105	-24270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTGTACAGTCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	11850458	11850835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_11850555_11850772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024123	chr8	+	155	2	ISM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	42455	29924	42455	-19810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGAGCGTCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	11850808	11855295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_11850869_11855200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024124	chr8	+	150	2	ISM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	51980	22537	51980	-12423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAACACAGCTACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	11860333	11862682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_11860398_11862596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024125	chr8	+	155	2	ISM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	54255	20197	54255	-10083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTATCCACACTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	11862608	11865022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_11862684_11864942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024126	chr8	+	174	2	ISM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	59389	15550	59389	-5436	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGCCGAAGCGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	11867742	11869669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_11867885_11869637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024127	chr8	+	157	2	ISM	ENSMUSG00000031511.17	ENSMUST00000098938.9	4628	21	63652	10602	63652	-488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGAAGACTCTGAGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	11872005	11874617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_11872050_11874504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024128	chr8	+	172	2	ISM	ENSMUSG00000031511.17	ENSMUST00000098938.9	4628	21	66214	3669	66214	-1541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAGAAACCAAGAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	11874567	11881550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_11874682_11881492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024129	chr8	-	952	1	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	57020	0	57020	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGTGGTTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	12665228	12664276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_12664300_12665200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024130	chr8	-	1271	4	ISM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	47332	106	47332	-106	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTGGTTTTTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	12674916	12664382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024131	chr8	+	2244	2	FSM	ENSMUSG00000054910.6	ENSMUST00000131064.2	2255	2	12	-1	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTTTATTGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	12722438	12729230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_12723026_12727573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024132	chr8	-	878	1	ISM	ENSMUSG00000038542.15	ENSMUST00000164416.8	2860	14	27393	0	27393	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTTGTGTTTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	13128066	13127188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_13127200_13128100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024133	chr8	+	1006	3	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	37393	677	37274	-677	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGGTTTTGGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	13193013	13197263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13193135_13194276_13194430_13196531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024134	chr8	+	854	1	ISM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	41466	0	41347	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	13197086	13197940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13197100_13197900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024135	chr8	+	773	4	ISM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	0	7372	0	-7365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGCTGGAGTGACATG	NA	NA	NA	NA	NA	NA	NA	NA	13209160	13217966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024136	chr8	+	554	3	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	1	-8009	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTACATATAACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	13209161	13217322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_13209435_13215851_13215968_13217157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024137	chr8	+	576	3	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	7804	3941	7804	-3941	internal_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGATGGCTGCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	13217146	13221390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13217378_13217806_13217966_13221204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024138	chr8	+	528	4	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	8462	1637	8462	-1637	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTGGCTTCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	13217804	13223694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13217966_13221204_13221384_13222540_13222661_13223626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024139	chr8	+	540	4	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	11860	1380	11860	-1380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGCAGAGGCAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	13221202	13223951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13221384_13222540_13222661_13223626_13223694_13223779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024140	chr8	+	756	4	ISM	ENSMUSG00000031447.8	ENST00000332556.5	2043	9	13196	517	13196	-517	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAAGGCTCCACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	13222538	13224814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13222661_13223626_13223694_13223779_13223951_13224418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024141	chr8	+	358	3	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	14283	-789	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCAGACCATCTAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	13223625	13224542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_13223694_13223779_13223946_13224418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024142	chr8	+	361	2	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	14435	-729	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCCCAAGCTTAGATAGG	NA	NA	NA	NA	NA	NA	NA	NA	13223777	13224602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_13223955_13224418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024143	chr8	+	413	1	Genic_Genomic	ENSMUSG00000031447.8	novel	NA	NA	NA	NA	15584	1	mono-exon	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTGTCCTTCTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	13224926	13225339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_13224900_13225300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024144	chr8	-	2467	4	ISM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	7064	0	6772	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	13331061	13305962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024145	chr8	+	299	2	ISM	ENSMUSG00000038497.8	ENST00000375391.5	1777	7	1050	26484	1050	-26484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCATAAAGGCAAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	13342771	13345026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13342890_13344845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024146	chr8	+	310	3	ISM	ENSMUSG00000038497.8	ENST00000375391.5	1777	7	6493	514	6493	-514	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGCCCTCATGCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	13348214	13370996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13348306_13353727_13353919_13370968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024147	chr8	+	1356	5	ISM	ENSMUSG00000038497.8	ENST00000434316.7	2676	12	18419	-25	18419	25	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGCCTACATGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	13360140	13371535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024148	chr8	+	756	1	NIC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	29037	4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTACTTATTTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13370758	13371514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_13370800_13371500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024149	chr8	+	820	1	Genic_Genomic	ENSMUSG00000038497.8	novel	NA	NA	NA	NA	30384	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTCCTGAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	13372105	13372925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_13372100_13372900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024150	chr8	+	278	2	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	30826	6693	30826	-6693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAACTTAGAGGTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	13420499	13421009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13420647_13420878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024151	chr8	+	1708	4	ISM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	32789	-746	32789	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	13422462	13428448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13422618_13422935_13423103_13423844_13423924_13427141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024152	chr8	+	1316	1	Genic_Genomic	ENSMUSG00000038482.12	novel	NA	NA	NA	NA	37460	1	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTTTCTGTAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	13427133	13428449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_13427100_13428400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024153	chr8	-	327	1	ISM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	28790	0	28790	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTGGTCACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	13515700	13515373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_13515400_13515700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024154	chr8	-	394	2	ISM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	27718	279	27718	-279	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCAGGTGGGCTACCGCC	NA	NA	NA	NA	NA	NA	NA	NA	13516772	13515652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_13515901_13516626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024155	chr8	-	344	2	ISM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	19640	6090	19640	-6090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCGTCCAGCCGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	13524850	13521463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_13521614_13524656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024156	chr8	-	330	1	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	110326	0	110326	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCTTTGAGAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	13617277	13616947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_13616900_13617300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024157	chr8	-	408	3	ISM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	87301	21003	87301	-21003	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTCGCCCTGCTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	13640302	13637950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_13638101_13638863_13639021_13640201
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024158	chr8	+	422	4	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	1331	18943	1331	-18943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGCTGACAGCACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	13809134	13812989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13809238_13810529_13810569_13810976_13811118_13812850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024159	chr8	+	119	2	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	9734	13303	9734	-13303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTATGAATTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13817537	13818629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13817588_13818560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024160	chr8	+	110	2	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	10786	12491	10786	-12491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGTGAGCACGACCAA	NA	NA	NA	NA	NA	NA	NA	NA	13818589	13819441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13818635_13819376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024161	chr8	+	112	2	ISM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	11747	10609	11619	-10603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGGTCTGACCAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	13819422	13821329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13819503_13821297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024162	chr8	+	566	3	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	19668	222	19668	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTCCTAAGAATTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	13827471	13831710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13827608_13829227_13829319_13831371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024163	chr8	+	425	1	ISM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	23832	6	23704	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTTTCCAAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	13831507	13831932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13831500_13831900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024164	chr8	+	1479	5	ISM	ENSMUSG00000038398.9	ENST00000457924.2	758	6	4732	-825	4732	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATCTTGTGGTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	13842097	13849196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024165	chr8	+	1025	1	Genic_Genomic	ENSMUSG00000038398.9	novel	NA	NA	NA	NA	10809	6	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGGTGCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	13848174	13849199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_13848200_13849200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024166	chr8	+	468	1	ISM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	11531	0	11468	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTACTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	13931171	13931639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13931200_13931600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024167	chr8	-	727	4	NNC	ENSMUSG00000031458.9	novel	793	4	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTATGCTCTGTCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	13940202	13934793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_13935202_13935665_13935878_13937755_13937827_13940166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024168	chr8	+	263	1	FSM	ENSMUSG00000068631.9	ENSMUST00000084055.9	319	1	258	-202	258	202	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTTTGTGCATAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	13946568	13946831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_13946600_13946800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024169	chr8	+	555	4	ISM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	8982	8792	8982	-8792	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCGGGCAGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	13973924	13981364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13974018_13976947_13977042_13979255_13979441_13981181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024170	chr8	+	576	4	ISM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	12036	4866	12036	-4866	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGACTTCAGGCCGACTG	NA	NA	NA	NA	NA	NA	NA	NA	13976978	13985290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13977042_13979255_13979441_13981181_13981365_13985145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024171	chr8	+	1109	4	ISM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	14312	-2	14312	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGATGGAGCTAGGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	13979254	13990158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13979441_13981181_13981365_13985145_13985290_13989562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024172	chr8	+	487	1	ISM	ENSMUSG00000038365.9	ENSMUST00000209913.2	2035	11	31867	365	24727	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGATGGAGCTAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	13989669	13990156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_13989700_13990200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024173	chr8	-	1071	3	ISM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	56681	-1	56681	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATATTTGTGATAAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	14083620	14077559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_14078154_14080592_14080785_14083335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024174	chr8	+	1542	2	ISM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	120	6495	120	-6495	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTGAGTGCGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	14938230	14945225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_14939119_14944571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024175	chr8	+	1884	2	ISM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	6684	3742	6684	-3742	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTACTTTGTGTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	14944794	14947978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_14945231_14946530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024176	chr8	+	1481	1	ISM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	12129	0	12129	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGCCATATATATGT	NA	NA	NA	NA	NA	NA	NA	NA	14950239	14951720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_14950200_14951700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024177	chr8	-	4100	1	FSM	ENSMUSG00000102615.2	ENSMUST00000192473.2	4097	1	-1	-2	-1	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTTTTGGTCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	15078423	15074323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_15074300_15078400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024178	chr8	+	655	1	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	36668	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGACCTGTATACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	18682265	18682920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_18682300_18682900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024179	chr8	-	375	1	FSM	ENSMUSG00000090334.2	ENSMUST00000164712.2	375	1	2	-2	2	2	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTATAAAGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	18707003	18706628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_18706600_18707000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024180	chr8	+	690	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	0	-99	0	99	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTCAGAGCTAAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	19542951	19543641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_19543000_19543600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024181	chr8	+	1513	2	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	25346	1481	11097	-1481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAAGATAGTGAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	20041811	20054017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_20042185_20052877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024182	chr8	+	1463	1	Genic_Genomic	ENSMUSG00000071793.13	novel	NA	NA	NA	NA	23325	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGGTTTTGTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	20054039	20055502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_20054000_20055500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024183	chr8	+	1439	2	ISM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	23190	2615	9024	-2615	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAGGTTTACTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	20167037	20170379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_20167158_20169060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024184	chr8	+	1350	1	Genic_Genomic	ENSMUSG00000071796.14	novel	NA	NA	NA	NA	13640	9	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	20171653	20173003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_20171700_20173000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024185	chr8	-	279	1	NIC	ENSMUSG00000006567.12	novel	6505	21	NA	NA	33809	2	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCCTGGGCAGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	22484943	22484664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_22484700_22484900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024186	chr8	-	705	4	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	31044	0	31044	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTCCTGGGCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	22487708	22484666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024187	chr8	-	443	3	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	30368	2658	30368	-2658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGATACCTATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	22488384	22487324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22487420_22487498_22487703_22488240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024188	chr8	-	494	3	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	28540	2833	28540	-2833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGCTCGGCTGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	22490212	22487499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22487703_22488240_22488384_22490064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024189	chr8	-	445	3	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	25873	3572	25873	-3572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCAGTGGCCAGGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	22492879	22488238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22488384_22490064_22490209_22492723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024190	chr8	-	683	4	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	22277	5396	22277	-5396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCTGTGTGAGATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	22496475	22490062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22490209_22492723_22492878_22494208_22494392_22496275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024191	chr8	-	429	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	17581	8106	17581	-8106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGACTGCTCACCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	22501171	22492772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22492878_22494208_22494392_22501030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024192	chr8	-	467	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	17075	9550	17075	-9550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGAGGTATGCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	22501677	22494216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22494392_22501030_22501166_22501520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024193	chr8	-	429	3	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	17075	9648	17075	-9648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGGCCACACTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	22501677	22494314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22494392_22496275_22496471_22501520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024194	chr8	-	576	4	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	15929	11608	15929	-11608	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTCTGTCAGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	22502823	22496274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22496471_22501520_22501676_22501780_22501909_22502726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024195	chr8	-	425	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	16841	16360	16841	-16360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAGACCTTGAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	22501911	22501026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22501166_22501520_22501676_22501780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024196	chr8	-	521	4	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	15127	16942	15127	-16942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGCTCCTTAAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	22503625	22501608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22501676_22501780_22501909_22502726_22502819_22503391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024197	chr8	-	441	4	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	10526	16950	10526	-16950	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATGGCTCTGTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	22508226	22501616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22501676_22501780_22501909_22502726_22502819_22508064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024198	chr8	-	469	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	14049	18092	14049	-18092	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCTGGGTGAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	22504703	22502758	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22502819_22503391_22503626_22504528
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024199	chr8	-	712	4	ISM	ENSMUSG00000006567.12	ENST00000448424.7	4053	18	6181	18832	6181	-18832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCGTAGCCGAGAAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	22512571	22503498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22503626_22508064_22508227_22510776_22510941_22512312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024200	chr8	-	361	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	12788	18844	12788	-18844	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTGGTGGTCGCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	22505964	22503510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22503626_22504528_22504704_22505893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024201	chr8	-	391	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	10529	19882	10529	-19882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTACCTTTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	22508223	22504548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22504704_22505893_22505971_22508064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024202	chr8	-	353	3	ISM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	7835	21254	7835	-21254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGACCACAAGACGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	22510917	22505920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22505971_22508064_22508227_22510776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024203	chr8	-	1050	3	ISM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	566	26123	566	-26123	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGAACTGATTGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	22518186	22510789	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22510941_22512312_22512571_22517545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024204	chr8	+	1500	3	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	24371	1052	24371	-1052	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGTGGAGGCTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	22707195	22709807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_22707226_22708227_22708305_22708414
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024205	chr8	+	1411	1	ISM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	26624	0	26624	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGAATTTTTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	22709448	22710859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_22709400_22710900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024206	chr8	-	1191	1	Genic_Genomic	ENSMUSG00000031482.10	novel	NA	NA	NA	NA	21857	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGGTCGTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	22866756	22865565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_22865600_22866800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024207	chr8	-	884	2	ISM	ENSMUSG00000031534.16	ENSMUST00000163774.3	1435	5	5285	0	5285	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTGCATCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22961586	22952629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22953392_22961464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024208	chr8	-	762	1	ISM	ENSMUSG00000031534.16	ENSMUST00000163774.3	1435	5	13480	0	13480	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTGCATCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22953391	22952629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_22952600_22953400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024209	chr8	-	1354	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	23083774	23067101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024210	chr8	-	433	3	ISM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	31519	12555	31508	-12555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCTGACTTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	23165086	23162338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23162534_23163378_23163509_23164978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024211	chr8	+	338	3	ISM	ENSMUSG00000031540.15	ENST00000396930.4	7591	18	52332	22257	52326	-22257	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTTCTGATTCCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	23401890	23409457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_23401993_23404284_23404404_23409340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024212	chr8	+	377	2	ISM	ENSMUSG00000031540.15	ENST00000396930.4	7591	18	76045	3544	76039	-3544	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTGAATCAGGAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	23425603	23428170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_23425815_23428004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024213	chr8	+	348	2	ISM	ENSMUSG00000031543.19	ENSMUST00000033947.15	1030	4	2118	148	2118	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGCAAGCCCCAAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	23631238	23638562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_23631321_23638296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024214	chr8	-	138	1	ISM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	36944	0	13169	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTTGATTTATTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	23661418	23661280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23661300_23661400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024215	chr8	-	155	2	ISM	ENSMUSG00000031545.7	ENST00000547237.1	1016	9	9179	-8	9179	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGAGCCTCCGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	23665408	23664574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23664677_23665355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024216	chr8	-	140	2	ISM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	32759	4095	8984	-793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGGTAGACCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	23665603	23665375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23665436_23665523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024217	chr8	-	137	2	ISM	ENSMUSG00000031545.7	ENST00000547237.1	1016	9	5082	1008	5082	-1008	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGGATGATGACCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	23669505	23665590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23665653_23669430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024218	chr8	-	142	2	ISM	ENSMUSG00000031545.7	ENST00000547237.1	1016	9	4372	5215	4372	-5215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCCCAGAAGGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	23670215	23669797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23669841_23670116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024219	chr8	-	157	2	ISM	ENSMUSG00000031545.7	ENST00000547237.1	1016	9	3842	5590	3842	-5590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATGTCTGGTTTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	23670745	23670172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23670233_23670648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024220	chr8	-	125	2	ISM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	27395	9429	3620	-6127	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAACCATACATCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	23670967	23670709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23670743_23670875
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024221	chr8	-	182	2	ISM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	17520	13263	-6255	-9961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTAGGTCCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23680842	23674543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23674615_23680731
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024222	chr8	-	806	4	ISM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	7988	0	7988	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCAAATGTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23719687	23716631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024223	chr8	-	1210	1	Genic_Genomic	ENSMUSG00000015341.18	novel	NA	NA	NA	NA	14467	1	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTTGTCTTAGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	23732570	23731360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_23731400_23732600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024224	chr8	-	1506	4	ISM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	6614	97	6614	-97	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTGTTCCTTTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	23740423	23731465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024225	chr8	+	2152	6	FSM	ENSMUSG00000037492.17	ENST00000315769.11	2151	6	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTTTTTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	24159668	24551314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_24159818_24238415_24238522_24287357_24287448_24392030_24392188_24505131_24505229_24549761
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024226	chr8	+	991	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	6	284	6	86	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACAATCTCAAAGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	25507232	25512992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024227	chr8	+	367	4	NNC	ENSMUSG00000031556.7	novel	1281	4	NA	NA	244	-197	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCTGGTGGTTCGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	25507566	25512709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_25507609_25508081_25508170_25510454_25510564_25512581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024228	chr8	+	417	1	Genic_Genomic	ENSMUSG00000031556.7	novel	NA	NA	NA	NA	5539	2	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGTGAGTATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	25512861	25513278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_25512900_25513300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024229	chr8	-	2276	1	ISM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	60957	0	60566	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTGTGTTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25531435	25529159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_25529200_25531400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024230	chr8	-	2292	1	ISM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	44606	0	25065	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTGTGTTGTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25646859	25644567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_25644600_25646900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024231	chr8	-	410	2	ISM	ENSMUSG00000065954.12	ENST00000520611.1	1211	10	20675	-149	20675	149	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTAGCTGTCGTCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	25651249	25649465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_25649837_25651210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024232	chr8	-	386	3	ISM	ENSMUSG00000065954.12	ENST00000520611.1	1211	10	16289	1597	16289	-1597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGGAGGGGTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	25655635	25651211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_25651332_25654404_25654512_25655476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024233	chr8	+	505	1	FSM	ENSMUSG00000074412.5	ENSMUST00000098864.5	432	1	2	-75	2	75	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACATTGGGAATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	25944290	25944795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_25944300_25944800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024234	chr8	+	771	2	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	-3	41232	-3	-41232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAGGTAAGACGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	26008846	26022437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26009446_26022265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024235	chr8	+	258	2	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	43326	9225	29879	-9225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGTAACTCTATCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	26052175	26054444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26052345_26054355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024236	chr8	+	254	2	ISM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	45569	6771	32122	-6771	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAGCATCCCTCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	26054418	26056898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26054501_26056726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024237	chr8	+	259	2	ISM	ENSMUSG00000031565.19	ENSMUST00000167764.2	2915	16	37876	3704	37876	-2780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGGAGTATCTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	26060172	26060889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26060268_26060725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024238	chr8	+	236	2	ISM	ENSMUSG00000031565.19	ENSMUST00000167764.2	2915	16	38428	2196	38428	-1272	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAACGTAATGAAGATCG	NA	NA	NA	NA	NA	NA	NA	NA	26060724	26062397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26060917_26062353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024239	chr8	+	734	2	ISM	ENSMUSG00000031565.19	ENSMUST00000167764.2	2915	16	41265	205	41265	-205	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTAGCTTCTTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	26063561	26064388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26063668_26063760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024240	chr8	+	945	1	ISM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	55107	908	41585	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGGTGTCCAGCGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	26063881	26064826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26063900_26064800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024241	chr8	-	562	4	NNC	ENSMUSG00000037363.10	novel	991	6	NA	NA	8982	1	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCACCGAATATAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	26077452	26071706	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_26071803_26075360_26075485_26076622_26076824_26077311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024242	chr8	-	786	4	ISM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	2318	3712	2318	1701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATGAGGTCGCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	26084116	26075419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26075485_26076622_26076824_26077311_26077450_26083734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024243	chr8	-	445	3	NNC	ENSMUSG00000037363.10	novel	991	6	NA	NA	2447	355	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCAGTTAGCCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	26083987	26076765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_26076824_26077311_26077446_26083734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024244	chr8	-	488	3	ISM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	-1	5692	-1	40	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTCAAGAAACAATGACAG	NA	NA	NA	NA	NA	NA	NA	NA	26086435	26077399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26077450_26083734_26084115_26086377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024245	chr8	-	448	2	ISM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	6	12010	6	-1345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAATGGGGAAGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26086428	26083717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26084115_26086377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024246	chr8	+	311	2	ISM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	222	22908	222	-22908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGCCAACATCCGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	26092556	26130707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26092753_26130592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024247	chr8	+	259	2	ISM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	38822	15085	38822	-15085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGCTTGTGAATACTGC	NA	NA	NA	NA	NA	NA	NA	NA	26131156	26138530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26131342_26138456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024248	chr8	+	225	2	ISM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	46122	13906	-45703	-13906	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACACAAGAGGTAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	26138456	26139709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26138529_26139556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024249	chr8	+	294	2	ISM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	47246	3704	-44579	-3704	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCAGCCTGCTAATCC	NA	NA	NA	NA	NA	NA	NA	NA	26139580	26149911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26139720_26149756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024250	chr8	+	280	2	ISM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	60821	8759	-31039	2558	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGACTGAGGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	26153120	26156173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26153273_26156045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024251	chr8	+	234	2	ISM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	63744	1478	-28116	-1478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCCTACATGTAGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26156043	26163454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26156173_26163349
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024252	chr8	+	1039	1	ISM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	71594	0	-20266	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTACATATTTACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	26163893	26164932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26163900_26164900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024253	chr8	+	238	2	ISM	ENSMUSG00000054823.18	ENSMUST00000155861.8	2834	10	74093	323	-18450	-323	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCATTATTATTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	26165709	26166907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26165759_26166718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024254	chr8	+	222	1	ISM	ENSMUSG00000054823.18	ENSMUST00000146919.8	3652	10	75467	0	-16393	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTTTTTTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	26167766	26167988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26167800_26168000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024255	chr8	+	1204	1	ISM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	112968	3223	21108	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTATAAATACCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	26205267	26206471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26205300_26206500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024256	chr8	+	1263	5	ISM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	518	-4	491	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTGTGAGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	26210581	26214918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024257	chr8	-	2025	1	Genic_Genomic	ENSMUSG00000061313.11	novel	NA	NA	NA	NA	8671	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGGCCTTATCTATCA	NA	NA	NA	NA	NA	NA	NA	NA	26217396	26215371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_26215400_26217400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024258	chr8	-	2070	2	ISM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	26543	57	8302	-57	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATATTTAAGACGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	26217765	26215429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26217391_26217656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024259	chr8	-	715	6	FSM	ENSMUSG00000061313.11	ENST00000529845.5	712	6	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAATGCAGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	26226066	26217652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_26217765_26222989_26223150_26224742_26224914_26225035_26225119_26225771_26225928_26226033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024260	chr8	-	682	5	NNC	ENSMUSG00000061313.11	novel	712	6	NA	NA	140	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTCAATGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	26225927	26217656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_26217765_26222985_26223150_26224742_26224914_26225035_26225119_26225771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024261	chr8	-	685	5	NNC	ENSMUSG00000061313.11	novel	712	6	NA	NA	137	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTTCAATGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	26225930	26217656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_26217765_26222989_26223150_26224738_26224914_26225035_26225119_26225771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024262	chr8	-	3701	1	ISM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	17049	0	17049	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTTCTCTCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	26258266	26254565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26254600_26258300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024263	chr8	-	3995	3	ISM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	14140	201	14140	-201	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGTAATGAATAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	26261175	26254766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26258438_26259309_26259565_26261106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024264	chr8	+	1047	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	322	1294	38	557	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTGTACTTGGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	26275637	26292709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024265	chr8	+	792	1	Genic_Genomic	ENSMUSG00000037296.8	novel	NA	NA	NA	NA	17622	10	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACACATCATGTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	26293221	26294013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_26293200_26294000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024266	chr8	+	951	1	Genic_Genomic	ENSMUSG00000031574.9	novel	NA	NA	NA	NA	6561	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGAAATTTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	26305062	26306013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_26305100_26306000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024267	chr8	-	638	6	ISM	ENSMUSG00000031575.19	ENST00000438037.1	675	7	3694	0	-2251	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTACGTACTCTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	26326120	26308577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26308673_26309653_26309747_26312722_26312885_26323774_26323875_26324987_26325083_26326027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024268	chr8	-	629	1	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	31672	0	31672	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGTTACAGCTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	26435109	26434480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26434500_26435100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024269	chr8	-	714	2	ISM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	30404	263	30404	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTGTATGCGCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	26436377	26434743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26435344_26436263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024270	chr8	-	452	1	Genic_Genomic	ENSMUSG00000037251.6	novel	NA	NA	NA	NA	13081	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGAATTATTCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	26471080	26470628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_26470600_26471100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024271	chr8	-	485	2	ISM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	7706	2738	7706	-2738	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGGCACGAGGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	26476455	26473369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26473673_26476273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024272	chr8	-	619	1	Genic_Genomic	ENSMUSG00000015994.11	novel	NA	NA	NA	NA	16239	5	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCCTGTTTTTCTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	26489363	26488744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_26488700_26489400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024273	chr8	-	1064	5	ISM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	8372	255	8296	-255	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATAAACAATTCCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	26497306	26489004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024274	chr8	-	535	5	ISM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	5962	1047	5886	-303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCCTCTCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	26499716	26489796	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024275	chr8	+	2385	1	ISM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	22119	0	22011	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAATGTGTTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	26631514	26633899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_26631500_26633900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024276	chr8	+	2290	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	6	-1	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCCCTGCTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26648174	26654180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_26648550_26650802_26650999_26652461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024277	chr8	+	423	1	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCACCTACATTATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	27313326	27313749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr8_+_27313300_27313700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024278	chr8	+	1531	3	ISM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	8715	1547	8672	18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCACGGGGGGCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	27541297	27544613	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_27541430_27542263_27542363_27543313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024279	chr8	+	1357	1	Genic_Genomic	ENSMUSG00000031485.16	novel	NA	NA	NA	NA	12180	2	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTGTGGGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27544805	27546162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_27544800_27546200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024280	chr8	-	566	1	Genic_Genomic	ENSMUSG00000031487.6	novel	NA	NA	NA	NA	4757	6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGCTTTTAAAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	27613951	27613385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_27613400_27614000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024281	chr8	+	1228	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	5	764	5	-764	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCTATCTATCTATC	NA	NA	NA	NA	NA	NA	NA	NA	27750361	27765938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_27750579_27763350_27763531_27765107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024282	chr8	-	713	2	Antisense	novelGene_ENSMUSG00000031490.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAGAGAGGAGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	27766112	27765106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_27765809_27766101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024283	chr8	+	883	1	Genic_Genomic	ENSMUSG00000031490.7	novel	NA	NA	NA	NA	15466	3	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGTTCCCAGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	27765822	27766705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_27765800_27766700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024284	chr8	+	1460	2	ISM	ENSMUSG00000039328.12	ENSMUST00000217278.2	1726	6	16446	-346	16446	346	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTCAACTGACTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	31618303	31620007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_31618363_31618606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024285	chr8	+	1447	1	Genic_Genomic	ENSMUSG00000039328.12	novel	NA	NA	NA	NA	18207	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTATGTTCCATCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	31620064	31621511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_31620100_31621500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024286	chr8	+	1186	5	FSM	ENSMUSG00000031577.11	ENST00000520636.5	1188	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAAGCAAGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31641024	31648784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_31641528_31643536_31643724_31645541_31645730_31645805_31645950_31648620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024287	chr8	+	1135	5	NNC	ENSMUSG00000031577.11	novel	1188	5	NA	NA	33	-17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGGGCAGGTGAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	31641055	31648767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_31641528_31643536_31643721_31645541_31645730_31645805_31645950_31648620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024288	chr8	+	426	3	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	3898	5133	3218	-2835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGCATCCAGGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	31644240	31645949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_31644335_31645541_31645730_31645805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024289	chr8	+	432	2	ISM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	8400	782	7720	-782	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTTCATACTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	31648742	31650300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_31648784_31649909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024290	chr8	+	382	1	Genic_Genomic	ENSMUSG00000031577.11	novel	NA	NA	NA	NA	9693	15	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGGAACAAAATACCCAT	NA	NA	NA	NA	NA	NA	NA	NA	31650715	31651097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_31650700_31651100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024291	chr8	+	1457	3	ISM	ENSMUSG00000046152.17	ENST00000524021.1	1909	4	6228	184	6228	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTAGGATATGAAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	31691237	31750253	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_31691533_31725622_31726459_31749927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024292	chr8	-	660	1	NIC	ENSMUSG00000062991.10	novel	5846	13	NA	NA	99707	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATAAACACATAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	32308712	32308052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_32308100_32308700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024293	chr8	-	883	3	ISM	ENSMUSG00000062991.10	ENSMUST00000238842.2	2520	8	96301	87	96124	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCCTATTGCTGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	32312295	32308075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_32308711_32311269_32311477_32312254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024294	chr8	-	435	1	NIC	ENSMUSG00000062991.10	novel	5846	13	NA	NA	96940	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCTTCAGGTGTACCCT	NA	NA	NA	NA	NA	NA	NA	NA	32311479	32311044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_32311000_32311500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024295	chr8	-	652	3	ISM	ENSMUSG00000062991.10	ENSMUST00000208497.3	2098	8	93817	279	93817	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGTCCCAGTGGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	32314602	32311086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_32311477_32312254_32312386_32314471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024296	chr8	-	505	4	ISM	ENSMUSG00000062991.10	ENSMUST00000239080.2	1338	8	40821	109893	-100	-109786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTACACATACTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	32458316	32437011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_32437063_32439944_32439996_32448539_32448662_32458035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024297	chr8	-	571	3	ISM	ENSMUSG00000062991.10	ENST00000652588.1	1717	11	54	137494	9	-121314	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACACCCACTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32499201	32448539	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_32448662_32458035_32458317_32499033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024298	chr8	-	685	2	FSM	ENSMUSG00000094500.3	ENST00000517349.2	674	2	-1	-10	-1	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGATGAGCACCCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	34237783	34232109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_34232635_34237623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024299	chr8	+	653	2	Antisense	novelGene_ENSMUSG00000094500.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAATGCGGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	34232117	34237765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_+_34232637_34237631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024300	chr8	-	522	1	Genic_Genomic	ENSMUSG00000094500.3	novel	NA	NA	NA	NA	5143	2	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCGAAAACTAGATGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	34232639	34232117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_34232100_34232600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024301	chr8	+	789	2	ISM	ENSMUSG00000031585.14	ENSMUST00000171010.8	1664	8	43603	50	43603	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCTGGTTAATAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	34265969	34267151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_34266088_34266480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024302	chr8	+	718	1	NIC	ENSMUSG00000031585.14	novel	1664	8	NA	NA	44113	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGCTTTGTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	34266479	34267197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_34266500_34267200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024303	chr8	-	827	1	Genic_Genomic	ENSMUSG00000031513.9	novel	NA	NA	NA	NA	10396	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGCTTGTGGGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34603551	34602724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_34602700_34603600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024304	chr8	-	1312	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	103	1464	103	561	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTTTAAGGTACAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34614084	34604189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024305	chr8	-	249	1	NIC	ENSMUSG00000031513.9	novel	2879	4	NA	NA	8948	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTCGCCTCCTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34604999	34604750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_34604800_34605000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024306	chr8	-	359	3	FSM	ENSMUSG00000031513.9	ENST00000518001.1	538	3	-5	184	-5	-184	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTCTTCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	34613952	34604934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_34604993_34606007_34606195_34613838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024307	chr8	+	764	3	ISM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	7	5350	7	-5350	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCACTCTCAGAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34621736	34632625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_34621991_34628348_34628528_34632294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024308	chr8	+	1626	5	ISM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	6631	-2	6618	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTTTCGTGTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34628347	34638001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024309	chr8	+	352	1	ISM	ENSMUSG00000031532.8	ENSMUST00000239436.2	1897	6	15908	23	15895	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTGTTCTTTGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	34637624	34637976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_34637600_34638000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024310	chr8	+	486	1	Genic_Genomic	ENSMUSG00000031530.7	novel	NA	NA	NA	NA	12113	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGCCTCCTAAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35286563	35287049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_35286600_35287000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024311	chr8	-	442	1	ISM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	29839	0	29839	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGCCTGCGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35932848	35932406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_35932400_35932800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024312	chr8	-	529	2	ISM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	21027	3699	21027	-3699	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGTATTTGTTACACAC	NA	NA	NA	NA	NA	NA	NA	NA	35941660	35936105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_35936525_35941550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024313	chr8	-	477	3	ISM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	164	17274	164	-17274	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAGAAATCGTGAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	35962523	35949680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_35949881_35958354_35958534_35962425
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024314	chr8	+	1207	1	Genic_Genomic	ENSMUSG00000109704.2	novel	NA	NA	NA	NA	904	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	36627536	36628743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_36627500_36628700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024315	chr8	+	1572	4	ISM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	120683	160	120683	-160	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCAACTATTGCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	39593681	39619207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_39593747_39597896_39597972_39610300_39610392_39617866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024316	chr8	+	1355	1	Genic_Genomic	ENSMUSG00000118664.1	novel	NA	NA	NA	NA	145022	8	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCAAATCTCACTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	39618020	39619375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_39618000_39619400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024317	chr8	-	1959	4	ISM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	10877	-1	10427	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGACTGATGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	40953918	40945579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024318	chr8	-	1535	2	ISM	ENSMUSG00000031601.17	ENSMUST00000135269.8	2461	6	12289	169	11875	-169	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAAGTCTCCAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	40952470	40945756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_40947157_40952335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024319	chr8	+	1290	3	ISM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	32107	3337	16966	2403	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTAAAGAAGAAAATGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	40996930	41000461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_40996995_40997984_40998066_40999316
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024320	chr8	+	1237	1	ISM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	37738	0	22597	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	41002561	41003798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_41002600_41003800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024321	chr8	+	1433	6	FSM	ENSMUSG00000031595.10	ENSMUST00000034004.10	1548	6	116	-1	116	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTACTTGTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	41379385	41443823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_41379463_41391126_41391425_41429987_41430140_41438570_41438865_41441841_41441982_41443351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024322	chr8	-	110	1	ISM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	140195	2508	23220	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTCTGAACGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	41446568	41446458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41446500_41446600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024323	chr8	-	125	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	22114	179	22114	-179	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTGAGAAGGAGTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	41447674	41446635	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41446671_41447584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024324	chr8	-	203	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	18283	1145	18283	-1145	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGGCAATTTCAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	41451505	41447601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41447683_41451383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024325	chr8	-	183	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	17242	4935	17242	-4935	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGGTATGTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	41452546	41451391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41451501_41452472
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024326	chr8	-	150	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	17053	6018	17053	-6018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAAGTTGTGTATTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	41452735	41452474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41452569_41452679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024327	chr8	-	189	2	NNC	ENSMUSG00000045636.17	novel	1208	9	NA	NA	15882	-6223	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGCTCGCTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	41453906	41452679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_41452754_41453791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024328	chr8	-	148	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	14356	7390	14356	-7390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGAGAAGGTGGAATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41455432	41453846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41453904_41455341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024329	chr8	-	117	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	1319	9028	1319	-9028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAGAAACTAAACCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	41468469	41455484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41455557_41468424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024330	chr8	-	164	2	ISM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	111	21981	111	-21981	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGAGAGCTAGGTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	41469677	41468437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41468492_41469567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024331	chr8	-	430	1	ISM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	34147	0	14287	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTTTTAAATAACTT	NA	NA	NA	NA	NA	NA	NA	NA	41793663	41793233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41793200_41793700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024332	chr8	-	996	7	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	7845	-305	7845	305	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGATTAATGTAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	41800105	41794314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024333	chr8	-	444	4	ISM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	45	13817	45	-12431	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAATAATTTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	41827765	41807050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41807138_41807863_41807955_41813289_41813337_41827546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024334	chr8	-	611	6	FSM	ENSMUSG00000031590.9	ENST00000635667.1	610	6	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGTATATTTACATAAT	NA	NA	NA	NA	NA	NA	NA	NA	41864390	41851991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_41852104_41852603_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024335	chr8	-	616	6	FSM	ENSMUSG00000031590.9	ENST00000634617.1	614	6	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTGTATATTTACATAA	NA	NA	NA	NA	NA	NA	NA	NA	41864392	41851992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_41852104_41852603_41852694_41853798_41853904_41860677_41860797_41863300_41863359_41864259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024336	chr8	-	608	6	ISM	ENSMUSG00000031590.9	ENST00000278882.8	669	7	3515	0	-1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTGTATATTTACATAA	NA	NA	NA	NA	NA	NA	NA	NA	41864391	41851992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863350_41864255
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024337	chr8	+	1165	3	ISM	ENSMUSG00000070047.15	ENST00000614102.4	14621	26	67156	28771	67147	-27936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCATCCGTACAGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	45470397	45476510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_45470678_45470871_45471087_45475840
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024338	chr8	+	797	2	ISM	ENSMUSG00000070047.15	ENSMUST00000215588.2	13938	29	76058	23729	76058	-23729	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCGTGTTCCCCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	45479308	45480717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_45479909_45480520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024339	chr8	+	806	4	ISM	ENSMUSG00000070047.15	ENSMUST00000215588.2	13938	29	77401	19793	77401	-19793	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAACATGGAAAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	45480651	45484653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_45480718_45482492_45482647_45483148_45483383_45484301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024340	chr8	+	797	2	ISM	ENSMUSG00000070047.15	ENSMUST00000215588.2	13938	29	85902	14138	85902	-14138	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTCCGTGACGGACG	NA	NA	NA	NA	NA	NA	NA	NA	45489152	45490308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_45489354_45489712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024341	chr8	+	799	3	ISM	ENSMUSG00000070047.15	ENSMUST00000215588.2	13938	29	91677	6942	91677	-6942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAAACTTGCCTCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	45494927	45497504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_45495071_45495245_45495357_45496959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024342	chr8	+	797	2	ISM	ENSMUSG00000070047.15	ENST00000614102.4	14621	26	94825	806	94816	29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATGAACCTAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	45498066	45504475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_45498206_45503817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024343	chr8	+	778	1	ISM	ENSMUSG00000070047.15	ENSMUST00000191428.7	14814	27	116021	12	101254	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCTTTAATGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	45504504	45505282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_45504500_45505300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024344	chr8	-	718	5	ISM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	1046	4189	1046	-4189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATATATAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	45702159	45698665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_45698842_45699783_45699944_45701590_45701698_45701780_45701944_45702047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024345	chr8	-	828	1	Genic_Genomic	ENSMUSG00000070044.16	novel	NA	NA	NA	NA	44745	6	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTAAGAATTTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	45790583	45789755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_45789800_45790600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024346	chr8	-	833	2	ISM	ENSMUSG00000070044.16	ENSMUST00000093526.13	5469	14	41259	1865	41259	-1865	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTGCATACGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45794069	45791626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_45792410_45794019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024347	chr8	+	1826	1	ISM	ENSMUSG00000031626.19	ENSMUST00000067065.14	6337	26	318293	0	80366	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTCTCACTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	46279117	46280943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_46279100_46280900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024348	chr8	+	340	3	ISM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	1	18465	1	-18454	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGTTAAGAGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	46338607	46353597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_46338710_46349784_46349937_46353511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024349	chr8	+	444	4	ISM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	11174	3762	11174	-3751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCATCAGTGTCTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	46349780	46368300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_46349937_46353511_46353597_46362055_46362124_46368165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024350	chr8	+	1385	6	ISM	ENSMUSG00000031636.8	ENSMUST00000210422.2	1479	8	14954	-210	14904	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGTGAAGTAGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	46353510	46372585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_46353597_46362055_46362124_46366733_46366998_46368165_46368297_46370494_46370607_46371861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024351	chr8	+	375	4	ISM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	14926	1456	14926	-1445	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTCTCGCTTTTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	46353532	46370606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_46353597_46362055_46362124_46368165_46368297_46370494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024352	chr8	+	313	2	NNC	ENSMUSG00000031636.8	novel	1604	7	NA	NA	31887	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAACACTCACGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	46370493	46372063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_46370605_46371861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024353	chr8	+	727	1	Genic_Genomic	ENSMUSG00000031636.8	novel	NA	NA	NA	NA	33254	2	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTGAAGTAGTAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	46371860	46372587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_46371900_46372600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024354	chr8	+	290	2	ISM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	43	25798	-41	-25794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAACTTGAAACTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	46616730	46622829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_46616787_46622595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024355	chr8	+	266	2	ISM	ENSMUSG00000031631.16	ENSMUST00000164504.2	4521	4	12206	3968	12206	-3966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAACGCTCTGAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	46634798	46644657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_46635024_46644616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024356	chr8	-	1929	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTTTGGGCTGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	46664323	46659831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024357	chr8	+	752	2	ISM	ENSMUSG00000031629.15	ENSMUST00000093518.5	783	9	24170	-512	24170	512	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGCAAATTGTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	47029291	47031915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_47029418_47031289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024358	chr8	-	310	1	NIC	ENSMUSG00000038225.16	novel	3772	15	NA	NA	31479	5	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTAGTGCCGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	47032202	47031892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_47031900_47032200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024359	chr8	-	435	3	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	28996	0	28996	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATGTTAAATTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	47034685	47031900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_47032202_47034468_47034520_47034602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024360	chr8	+	675	1	ISM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	27305	0	27246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGATACTATTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	47032367	47033042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_47032400_47033000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024361	chr8	-	307	3	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	17927	7740	17927	-7740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGCTTGGCTTTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	47045754	47039640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_47039732_47043249_47043339_47045627
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024362	chr8	-	438	3	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	16942	11398	16942	-11398	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAAACGAAAGCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	47046739	47043298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_47043339_47045627_47045791_47046504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024363	chr8	-	447	3	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	10777	13828	10777	-13828	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGAGGTTGCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	47052904	47045728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_47045791_47046504_47046739_47052753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024364	chr8	-	411	3	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	5431	14706	5431	-14706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCGGGAGAAGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	47058250	47046606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_47046739_47052753_47052902_47058119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024365	chr8	-	359	3	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	2746	20869	2746	-20869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACAGGCATGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	47060935	47052769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_47052902_47058119_47058250_47060838
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024366	chr8	-	329	3	ISM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	104	26221	104	-26221	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGTTCTTCTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	47063577	47058121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_47058250_47060838_47060937_47063474
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024367	chr8	+	215	2	ISM	ENSMUSG00000031628.10	ENSMUST00000210534.2	583	5	-87	9765	-40	-8359	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTTATTTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	47070389	47082836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_47070537_47082768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024368	chr8	+	173	2	ISM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	12338	6297	-14	-5740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTTCCATAAGAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	47082767	47085455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_47082837_47085351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024369	chr8	+	791	5	ISM	ENSMUSG00000031628.10	ENST00000308394.9	843	6	2570	-1	2570	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGGGGGGGCGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	47085351	47091196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_47085477_47087232_47087359_47088411_47088588_47089236_47089358_47090953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024370	chr8	+	276	2	ISM	ENSMUSG00000031628.10	ENSMUST00000093517.7	1520	7	16802	3195	4450	-2638	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGAAAGCCGAAACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47087231	47088557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_47087362_47088411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024371	chr8	+	524	3	ISM	ENSMUSG00000031628.10	ENST00000517513.5	722	5	4471	0	4471	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGGGGGGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	47087252	47091195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_47087359_47088411_47088588_47090953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024372	chr8	+	244	1	NIC	ENSMUSG00000031628.10	novel	2601	7	NA	NA	8170	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGGGGGGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	47090951	47091195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_47091000_47091200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024373	chr8	+	184	1	ISM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	22215	0	9759	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	47092540	47092724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_47092500_47092700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024374	chr8	+	517	1	Genic_Genomic	ENSMUSG00000031627.10	novel	NA	NA	NA	NA	53445	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATCACTTCTGGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	47299978	47300495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_47300000_47300500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024375	chr8	-	454	2	FSM	ENSMUSG00000038143.17	ENST00000513034.3	445	2	-4	-5	-4	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTGGGGGTTACTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	47656313	47639311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_47639608_47656155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024376	chr8	-	295	1	NIC	ENSMUSG00000038143.17	novel	10467	4	NA	NA	16700	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGTTGGGGGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	47639609	47639314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_47639300_47639600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024377	chr8	+	1842	2	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	14122	-342	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATTTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	48000820	48005518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_48000874_48003729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024378	chr8	+	1876	1	ISM	ENSMUSG00000031568.17	ENSMUST00000033973.14	2921	8	17286	0	17286	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTATATGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	48003984	48005860	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_48004000_48005900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024379	chr8	-	2815	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCCTCCATCCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	48128193	48120209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_48122372_48127540
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024380	chr8	-	1667	1	ISM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	2922	0	2921	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAATGTGTGCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	48164045	48162378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_48162400_48164000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024381	chr8	+	486	3	FSM	ENSMUSG00000100706.7	ENST00000315302.6	487	3	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCCCAGCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	49296833	49297688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_49296927_49297137_49297282_49297439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024382	chr8	+	360	2	NNC	ENSMUSG00000100706.7	novel	948	3	NA	NA	319	-18	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTTAGACTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	49297150	49297669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_49297286_49297444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024383	chr8	+	254	1	NIC	ENSMUSG00000100706.7	novel	948	3	NA	NA	603	1	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCCCAGCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	49297434	49297688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_49297400_49297700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024384	chr8	+	740	7	ISM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	2509	83	2509	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTAGACTGCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	53967270	53976290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024385	chr8	+	129	1	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCAATGCCATGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	54278788	54278917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr8_+_54278800_54278900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024386	chr8	-	865	1	ISM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	8701	0	8701	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTTTATGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	54974332	54973467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_54973500_54974300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024387	chr8	-	915	2	ISM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	4942	2164	4942	-2164	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGTGTTTCTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	54978091	54975631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_54976431_54977975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024388	chr8	+	1224	6	ISM	ENSMUSG00000031519.5	ENSMUST00000239106.2	1421	8	9451	0	9451	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTAATAATTAATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	55033911	55040877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024389	chr8	-	330	1	ISM	ENSMUSG00000039375.17	ENSMUST00000144711.9	4720	31	88836	459	66556	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGATATCGACAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	55082878	55082548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55082500_55082900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024390	chr8	-	603	4	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	58049	140	58049	-33	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTAATTTCAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	55091385	55082689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55082946_55085347_55085532_55088479_55088579_55091321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024391	chr8	-	355	3	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	36660	24363	36660	-24087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTACCTAAGCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	55112774	55106912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55107047_55110229_55110295_55112618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024392	chr8	-	321	3	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	35502	27706	35502	-27430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTGGAGAAAGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	55113932	55110255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55110295_55112618_55112775_55113806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024393	chr8	-	368	3	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	33464	31701	33464	26124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATTATAGGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	55115970	55114250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55114382_55114467_55114618_55115883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024394	chr8	-	426	3	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	27981	33346	27981	24479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTTTATGGTAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	55121453	55115895	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55116087_55118000_55118166_55121383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024395	chr8	-	446	3	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	14869	42970	14869	14855	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTAATTCACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	55134565	55125519	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55125612_55126564_55126734_55134380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024396	chr8	-	347	2	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	8626	55905	8626	1920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTCTCCTCCAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	55140808	55138454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55138554_55140560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024397	chr8	-	652	3	ISM	ENSMUSG00000039375.17	ENST00000508596.6	4136	28	3174	58011	3174	-186	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTGTCCATATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55146260	55140560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_55140809_55143034_55143270_55146091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024398	chr8	+	1212	7	ISM	ENSMUSG00000038257.11	ENST00000340217.5	1558	9	64360	0	64290	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGTGTGCGTGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	56458149	56578446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_56458220_56492616_56492841_56515465_56515549_56538148_56538287_56542018_56542234_56563481_56563626_56578108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024399	chr8	+	329	3	ISM	ENSMUSG00000031613.10	ENST00000422112.6	670	5	0	2408	0	-2408	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAGCAAATCATAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	56747619	56770861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_56747748_56747973_56748098_56770784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024400	chr8	+	891	4	ISM	ENSMUSG00000031613.10	ENST00000542498.5	1166	5	493	8	351	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTAGTAATAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	56747971	56773653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_56748098_56751390_56751498_56760628_56760726_56773092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024401	chr8	+	367	3	ISM	ENSMUSG00000031613.10	ENST00000422112.6	670	5	352	1078	351	-1078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAAAACTTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	56747971	56772191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_56748098_56770784_56770862_56772027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024402	chr8	+	287	2	ISM	ENSMUSG00000031613.10	ENST00000296521.11	1101	6	23161	362	23161	30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCTTTTTCAATGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	56770781	56773299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_56770862_56773092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024403	chr8	+	342	2	ISM	ENSMUSG00000031613.10	ENST00000422112.6	670	5	24407	0	24406	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTCACTCAGACTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	56772026	56773269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_56772192_56773092
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024404	chr8	+	182	1	NIC	ENSMUSG00000031613.10	novel	1166	5	NA	NA	25467	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTCACTCAGACTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	56773087	56773269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_56773100_56773300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024405	chr8	+	253	1	ISM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	25790	416	25789	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAAAAGCTTGTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	56773409	56773662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_56773400_56773700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024406	chr8	-	142	1	ISM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	19194	0	19194	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	56984698	56984556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_56984600_56984700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024407	chr8	-	143	2	ISM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	18341	108	18341	-108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATTCTGTATATAATT	NA	NA	NA	NA	NA	NA	NA	NA	56985551	56984664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_56984768_56985511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024408	chr8	-	186	2	ISM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	12173	1267	12173	-1267	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTCTCAGAGGTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	56991719	56985823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_56985936_56991645
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024409	chr8	-	161	2	ISM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	7892	9411	7892	-9411	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAGCAGAGTTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	56996000	56993967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_56994069_56995940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024410	chr8	+	403	2	ISM	ENSMUSG00000038206.14	ENSMUST00000110322.9	1709	4	223	27497	223	-27497	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATAAACTCACCAATACT	NA	NA	NA	NA	NA	NA	NA	NA	57004347	57017931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_57004412_57017592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024411	chr8	+	454	2	ISM	ENSMUSG00000038206.14	ENSMUST00000110322.9	1709	4	13464	22997	13464	-22997	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCCAGAGGAGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	57017588	57022431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_57017930_57022318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024412	chr8	+	445	2	ISM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	39076	2148	39076	-602	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCAGAACTAACTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	57043200	57044826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_57043290_57044470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024413	chr8	+	372	1	Genic_Genomic	ENSMUSG00000038206.14	novel	NA	NA	NA	NA	42481	3	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCTGAATATGCAATT	NA	NA	NA	NA	NA	NA	NA	NA	57046605	57046977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_57046600_57047000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024414	chr8	+	835	1	FSM	ENSMUSG00000110043.2	ENSMUST00000211123.2	2225	1	2164	-774	2164	774	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTATGTCTTCGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57408027	57408862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_57408000_57408900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024415	chr8	-	1180	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	1	-3	1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTCAGCCTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	57940893	57935737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024416	chr8	-	1163	4	NNC	ENSMUSG00000031609.4	novel	1178	4	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTTCAGCCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	57940882	57935739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_57936081_57938075_57938175_57938543_57938670_57940285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024417	chr8	-	1144	4	NNC	ENSMUSG00000031609.4	novel	1178	4	NA	NA	33	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGCTTCAGCCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	57940861	57935739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_57936085_57938075_57938175_57938543_57938670_57940287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024418	chr8	+	2632	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCTGTTTTGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	57964939	57969036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024419	chr8	+	2627	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	-1	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGTTCTGTTTTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	57964939	57969035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_57965040_57965612_57965783_57966095_57966242_57966323_57966499_57966999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024420	chr8	-	1469	1	FSM	ENSMUSG00000110289.2	ENSMUST00000211700.2	1471	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGTGAGCATAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	58105391	58103922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_58103900_58105400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024421	chr8	+	414	2	FSM	ENSMUSG00000110419.2	ENST00000499322.7	412	2	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTCTTGGGCTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	58105656	58106864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_58105985_58106778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024422	chr8	+	409	2	NNC	ENSMUSG00000110419.2	novel	412	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTCTCTTGGGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	58105656	58106862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_58105985_58106781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024423	chr8	+	492	2	ISM	ENSMUSG00000031647.11	ENSMUST00000160719.8	6335	3	1	19976	1	-15609	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATCATAGTCAAAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	61085894	61109787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_61086093_61109493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024424	chr8	+	758	5	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	6284	0	6284	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	61349768	61360614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024425	chr8	-	912	3	ISM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	32055	2481	18241	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTACCTGGAACAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	61376212	61365903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_61366210_61372373_61372591_61375823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024426	chr8	-	1017	3	ISM	ENSMUSG00000004319.16	ENSMUST00000110302.8	3768	13	25247	10894	11918	6260	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGGCTTTTAAAAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	61382535	61375823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_61376223_61380265_61380453_61382104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024427	chr8	-	1017	4	FSM	ENSMUSG00000004319.16	ENST00000423965.2	1013	4	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAATAATGATATCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	61394455	61382081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_61382646_61390333_61390522_61391581_61391682_61394290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024428	chr8	-	1002	4	NNC	ENSMUSG00000004319.16	novel	1013	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGAATAATGATATCTC	NA	NA	NA	NA	NA	NA	NA	NA	61394450	61382083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_61382646_61390333_61390522_61391581_61391674_61394290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024429	chr8	-	1002	4	NNC	ENSMUSG00000004319.16	novel	1013	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGAATAATGATATCTC	NA	NA	NA	NA	NA	NA	NA	NA	61394451	61382083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_61382646_61390333_61390513_61391581_61391682_61394290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024430	chr8	-	675	2	ISM	ENSMUSG00000004319.16	ENST00000360642.7	2609	11	42620	16281	8130	-101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCAGCTATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	61386323	61382184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_61382651_61386114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024431	chr8	-	616	4	ISM	ENSMUSG00000004319.16	ENSMUST00000110302.8	3768	13	16105	21183	2776	-4029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTATTTGTAGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	61391677	61386112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_61386322_61387518_61387642_61390333_61390522_61391581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024432	chr8	-	771	1	FSM	ENSMUSG00000109610.2	ENSMUST00000210343.2	879	1	108	0	108	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGTTTTTATATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	61834313	61833542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_61833500_61834300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024433	chr8	+	1743	3	ISM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	3819	2180	3819	-2180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTTGCTATTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	61944586	61957548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_61944713_61948101_61948237_61956066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024434	chr8	+	1729	1	ISM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	17232	0	17232	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCCTCCTCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	61957999	61959728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_61958000_61959700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024435	chr8	-	1693	1	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	78017	0	78017	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTGGCCCTCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	61966159	61964466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_61964500_61966200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024436	chr8	-	1741	2	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	75822	469	75822	-455	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGTCATACATAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	61968354	61964935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_61966559_61968236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024437	chr8	-	991	2	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	362866	1134	76108	-1134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGATCCATTTAGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	61968068	61965614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_61966559_61968021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024438	chr8	-	1169	3	ISM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	65	201365	65	-197791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTGCCTTTGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	62330869	62165845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_62165913_62173549_62173729_62329946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024439	chr8	+	1624	3	ISM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	397123	218	397123	-215	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTTACACATTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	63801956	63809671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_63802017_63805214_63805353_63808245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024440	chr8	+	1538	1	ISM	ENSMUSG00000054162.16	ENSMUST00000119068.8	3201	12	403964	241	403525	2	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTAATGATTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	63808358	63809896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_63808400_63809900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024441	chr8	-	1224	5	ISM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	83822	0	83822	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGGTGTGCATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65062266	65045575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024442	chr8	-	2468	1	Genic_Genomic	ENSMUSG00000110368.2	novel	NA	NA	NA	NA	7505	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAATATATTTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	65156605	65154137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_65154100_65156600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024443	chr8	-	2586	2	FSM	ENSMUSG00000110368.2	ENSMUST00000210776.2	2583	2	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAATATATTTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	65164110	65154137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_65156606_65163992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024444	chr8	-	1968	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	76	0	76	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	65186750	65171172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024445	chr8	+	659	4	ISM	ENSMUSG00000025521.16	ENSMUST00000209852.2	1193	6	8	2383	8	-2383	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAAGCCGCTGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	65399878	65416989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024446	chr8	+	549	4	ISM	ENSMUSG00000025521.16	ENSMUST00000209852.2	1193	6	9240	1107	9205	-1107	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATACTGCCTCAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	65409110	65418265	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_65409185_65411996_65412262_65416849_65416985_65418190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024447	chr8	+	825	4	ISM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	12165	-4	12096	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTATGTTGTGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	65412001	65421689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_65412262_65416849_65416985_65418190_65418294_65421362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024448	chr8	+	749	4	FSM	ENSMUSG00000036437.7	ENST00000509586.5	746	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGGGGGAACGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	67150071	67157916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_67150175_67156434_67156476_67157201_67157278_67157387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024449	chr8	+	721	3	NNC	ENSMUSG00000036437.7	novel	746	4	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGGGGGAACGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	67150073	67157916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_67150190_67157201_67157278_67157387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024450	chr8	+	735	4	NNC	ENSMUSG00000036437.7	novel	746	4	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGGGGGAACGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	67150076	67157916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_67150175_67156443_67156476_67157201_67157278_67157387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024451	chr8	+	1515	2	ISM	ENSMUSG00000036437.7	ENSMUST00000212588.2	2770	5	7027	265	6797	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTCCTCTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	67156870	67158495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_67157278_67157387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024452	chr8	+	1449	1	ISM	ENSMUSG00000036437.7	ENSMUST00000039303.7	3001	3	7922	0	7922	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGAGTCTGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	67157995	67159444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_67158000_67159400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024453	chr8	-	687	1	ISM	ENSMUSG00000036356.16	ENSMUST00000078350.13	3943	10	377679	0	377647	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTGTGTGTCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	68810119	68809432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_68809400_68810100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024454	chr8	-	744	2	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	372964	86	372964	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGATAGTGAGCAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	68814802	68810704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_68811366_68814719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024455	chr8	-	823	3	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	273620	30696	273620	-30696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGTTGTTTATTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	68914146	68841314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_68841350_68853954_68854172_68913575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024456	chr8	-	704	2	ISM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	178075	103249	178075	-103249	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCAGGCCGATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	69009691	68913867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_68914504_69009623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024457	chr8	+	520	3	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	108	14223	108	-14223	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCAGCTGGCTACACCAA	NA	NA	NA	NA	NA	NA	NA	NA	69333250	69345363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_69333493_69340094_69340256_69345246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024458	chr8	+	445	2	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	15203	10093	15203	-10093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTGGAAGCTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	69348345	69349493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_69348548_69349250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024459	chr8	+	876	4	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	18937	1948	18937	-1948	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTGGGATATATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	69352079	69357638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_69352190_69353799_69353983_69354935_69355038_69357157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024460	chr8	+	510	1	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	25934	0	25934	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATCATTTTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	69359076	69359586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_69359100_69359600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024461	chr8	-	680	5	ISM	ENSMUSG00000036330.13	ENST00000519026.5	1237	12	2	25316	2	-25316	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCAATGCTGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	69526561	69518207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_69518298_69519791_69519885_69520795_69520880_69524714_69524774_69526207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024462	chr8	-	1305	1	ISM	ENSMUSG00000036306.14	ENSMUST00000185176.8	5019	4	50252	0	6980	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACGGTCACTTTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	69586625	69585320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_69585300_69586600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024463	chr8	-	648	2	ISM	ENSMUSG00000036306.14	ENST00000265801.6	1955	4	4958	0	4855	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTACAGCCTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69588750	69587707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_69587746_69588140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024464	chr8	-	1642	2	ISM	ENSMUSG00000036306.14	ENST00000265801.6	1955	4	2051	116	1948	-116	internal_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGACAGAAACATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69591657	69587823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_69588812_69591003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024465	chr8	-	216	2	NNC	ENSMUSG00000036306.14	novel	230	2	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTACCAAAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	69593593	69588327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_69588402_69593451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024466	chr8	-	228	2	FSM	ENSMUSG00000036306.14	ENST00000616228.1	230	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTACCAAAGGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	69593603	69588327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_69588404_69593451
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024467	chr8	-	1002	2	ISM	ENSMUSG00000036306.14	ENSMUST00000037049.4	1800	3	-88	3078	15	-2905	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAGTGCCTGGAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	69593693	69591232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_69591802_69593260
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024468	chr8	-	477	1	ISM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	14215	0	8019	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTATTACTTAGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	70063984	70063507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70063500_70064000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024469	chr8	-	485	2	ISM	ENSMUSG00000060427.16	ENSMUST00000074982.7	1269	4	5896	620	5896	-620	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGCTTTTAGCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	70066107	70064684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70065107_70066044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024470	chr8	-	527	3	ISM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	73	2890	73	-2333	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACTAGCCATGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	70078126	70066397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70066526_70071964_70072323_70078085
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024471	chr8	+	2899	1	ISM	ENSMUSG00000091764.4	ENSMUST00000204285.3	4333	4	9592	0	4821	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTTTGCCTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	70116733	70119632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70116700_70119600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024472	chr8	-	479	1	ISM	ENSMUSG00000054648.9	ENSMUST00000238292.2	6080	5	11222	2481	5109	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTCAATGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	70158265	70157786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70157800_70158300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024473	chr8	+	761	3	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	4	13624	4	-13624	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCTTCCCTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	70243816	70246775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70244292_70246398_70246489_70246579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024474	chr8	+	477	2	ISM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	16027	0	16027	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	NA	NA	NA	NA	NA	NA	NA	NA	70259839	70260399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70259986_70260068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024475	chr8	-	1245	5	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	70355198	70346829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70347061_70347153_70347226_70347891_70347971_70354187_70354383_70354530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024476	chr8	-	1249	5	NNC	ENSMUSG00000036199.10	novel	1251	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	70355209	70346829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70347061_70347153_70347226_70347891_70347964_70354187_70354383_70354530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024477	chr8	-	1256	5	FSM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	-5	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	70355213	70346829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191_70354383_70354530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024478	chr8	+	1332	1	FSM	ENSMUSG00000047654.7	ENSMUST00000050373.7	1335	1	4	-1	4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTTAGCGGTGGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	70354837	70356169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_70354800_70356200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024479	chr8	-	1451	2	ISM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	62421	42	62421	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCCCCCTGCCTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70364500	70361347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70362625_70364326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024480	chr8	-	1526	2	ISM	ENSMUSG00000031858.17	ENSMUST00000212451.2	1931	19	22930	-1371	22881	374	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTCTGTTTGCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	70472454	70470842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70472311_70472396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024481	chr8	+	747	3	ISM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	28372	0	28372	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTCCTCTGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	70523834	70524997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70523910_70524171_70524302_70524455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024482	chr8	-	1273	1	Genic_Genomic	ENSMUSG00000036120.11	novel	NA	NA	NA	NA	4217	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAATGTGTAATGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70584727	70583454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_70583500_70584700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024483	chr8	-	836	3	NNC	ENSMUSG00000036120.11	novel	3609	9	NA	NA	2547	857	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAGAGGGATAAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	70586397	70585058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70585179_70585242_70585310_70585748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024484	chr8	-	459	5	FSM	ENSMUSG00000036120.11	ENST00000456252.7	460	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTTGGGATGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	70588943	70586875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024485	chr8	+	499	4	ISM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	5	2181	5	-2181	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTCAAACAGGCCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	70592153	70597725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024486	chr8	+	366	3	ISM	ENSMUSG00000002345.19	ENSMUST00000110139.2	679	6	4744	58	4744	5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCTCTTTCCATGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70597670	70599911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70597785_70598460_70598541_70599739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024487	chr8	+	789	5	ISM	ENSMUSG00000002342.18	ENST00000450333.6	1133	9	6404	-1	6404	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCACTAGGCTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	70633355	70634791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024488	chr8	-	132	1	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	14163	0	14163	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCATTTTTCTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	70672953	70672821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70672800_70673000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024489	chr8	-	204	2	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	12224	639	12224	-639	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGGGCAGAGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	70674892	70673460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70673528_70674755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024490	chr8	-	157	2	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	11836	2028	11836	-2028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCAGACAACAGCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	70675280	70674849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70674894_70675167
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024491	chr8	-	171	2	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	9475	3439	9475	-3439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTTATAGACCTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	70677641	70676260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70676340_70677549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024492	chr8	-	133	2	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	3110	9383	3110	-9383	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGCCCACACATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70684006	70682204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70682261_70683929
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024493	chr8	-	167	2	ISM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	307	11118	307	-11118	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCACAAGGTAGGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70686809	70683939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70684057_70686759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024494	chr8	+	739	6	ISM	ENSMUSG00000003573.16	ENSMUST00000003669.8	2323	9	-13	3210	-13	-2021	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTCTTGAGGCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	70737882	70743793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024495	chr8	+	730	6	ISM	ENSMUSG00000003573.16	ENSMUST00000003669.8	2323	9	152	2978	6	-1789	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGCCAGTCGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	70738047	70744025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024496	chr8	+	1269	6	ISM	ENSMUSG00000003573.16	ENST00000594439.5	958	7	537	-468	537	468	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGCTTGATCTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	70738578	70746282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70738713_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024497	chr8	-	101	1	ISM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	9523	0	9523	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGAATCCAATAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	70745616	70745515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70745500_70745600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024498	chr8	+	696	1	ISM	ENSMUSG00000003573.16	ENSMUST00000140212.8	2608	10	10839	0	8274	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGCTCCCTGAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	70746315	70747011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70746300_70747000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024499	chr8	-	112	2	ISM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	4333	5096	4333	-5096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTAGTGATTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	70750806	70750611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70750648_70750730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024500	chr8	+	1304	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	70755163	70765640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024501	chr8	+	305	3	ISM	ENSMUSG00000055681.15	ENST00000600932.5	920	9	2872	4777	2872	-4777	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGATGGCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	70758328	70760654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70758386_70759148_70759302_70760559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024502	chr8	+	238	2	NNC	ENSMUSG00000055681.15	novel	920	9	NA	NA	3690	-4784	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCGGTGAGCCCAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	70759146	70760647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_70759302_70760564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024503	chr8	+	324	3	ISM	ENSMUSG00000055681.15	ENST00000600932.5	920	9	3699	4203	3699	-4203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCCCCAGGAATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70759155	70761228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70759302_70760559_70760654_70761144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024504	chr8	+	271	3	ISM	ENSMUSG00000055681.15	ENST00000600932.5	920	9	5102	2352	5102	-2352	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGCACAGGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	70760558	70763079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70760654_70761144_70761227_70762985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024505	chr8	+	208	3	ISM	ENSMUSG00000055681.15	ENST00000349893.8	724	8	5142	1083	5142	-1083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTAGTGTGGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	70760598	70764348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70760654_70761144_70761227_70764277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024506	chr8	+	228	3	ISM	ENSMUSG00000055681.15	ENST00000349893.8	724	8	5687	0	5687	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGGGCAGTTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70761143	70765431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70761227_70764277_70764347_70765355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024507	chr8	+	250	3	NNC	ENSMUSG00000055681.15	novel	920	9	NA	NA	5726	-1101	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAAGCCCCCTGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	70761182	70764330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_70761224_70762985_70763142_70764277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024508	chr8	-	1011	6	ISM	ENSMUSG00000003575.14	ENST00000601916.1	1438	10	8323	-1	8323	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTGGCGTGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	70853335	70838606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70838986_70840190_70840372_70845571_70845706_70850395_70850605_70850945_70850987_70853268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024509	chr8	-	1385	1	Genic_Genomic	ENSMUSG00000055707.14	novel	NA	NA	NA	NA	24296	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGACCTGTGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	70904252	70902867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_70902900_70904300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024510	chr8	-	1416	2	ISM	ENSMUSG00000055707.14	ENSMUST00000209415.2	2919	3	21305	1399	20253	-938	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAGAGGAAGATCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	70908295	70904267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70905504_70908115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024511	chr8	-	670	2	ISM	ENSMUSG00000055707.14	ENSMUST00000209567.2	2615	3	20249	1854	20249	-1854	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTCCCGCTCATGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	70908299	70905183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70905670_70908115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024512	chr8	+	723	5	ISM	ENSMUSG00000007888.16	ENST00000684169.1	1282	8	5860	208	5860	-208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGTACGACCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	70951775	70956083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024513	chr8	-	228	1	Genic_Genomic	ENSMUSG00000058833.12	novel	NA	NA	NA	NA	2216	1	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCCATCAGCTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	70957171	70956943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_70956900_70957200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024514	chr8	-	497	3	ISM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	792	0	777	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	70958610	70956944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70957160_70957633_70957711_70958405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024515	chr8	-	379	3	ISM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	0	1461	0	-1457	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGACCACCACCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	70959402	70958405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70958611_70959146_70959230_70959311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024516	chr8	-	715	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTAGAGTGACTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	70963233	70960910	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024517	chr8	-	714	4	NNC	ENSMUSG00000090137.9	novel	711	4	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTAGAGTGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	70963229	70960911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70961179_70961945_70962033_70962170_70962285_70962983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024518	chr8	-	709	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	-165	-3	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	70963232	70960912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024519	chr8	-	695	4	NNC	ENSMUSG00000090137.9	novel	711	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	70963228	70960912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70961179_70961945_70962033_70962170_70962268_70962983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024520	chr8	-	712	4	NNC	ENSMUSG00000090137.9	novel	711	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	70963231	70960912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_70961179_70961945_70962033_70962170_70962282_70962983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024521	chr8	-	223	1	ISM	ENSMUSG00000090137.9	ENSMUST00000140679.8	697	4	1862	3	1135	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTGTCTAGAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	70961138	70960915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70960900_70961100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024522	chr8	-	627	4	FSM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	56	22	51	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATCCACTGGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70962949	70960934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024523	chr8	-	461	4	FSM	ENSMUSG00000090137.9	ENSMUST00000140679.8	697	4	31	205	31	-136	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCCCAGAAGTACAACT	NA	NA	NA	NA	NA	NA	NA	NA	70962969	70961117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024524	chr8	-	342	1	Genic_Genomic	ENSMUSG00000055553.17	novel	NA	NA	NA	NA	9365	1	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATAGCAACAGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	70966386	70966044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_70966000_70966400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024525	chr8	-	633	4	ISM	ENSMUSG00000055553.17	ENSMUST00000118850.8	992	5	3212	263	3034	88	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCATTCTTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	70972717	70966516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024526	chr8	-	709	5	FSM	ENSMUSG00000055553.17	ENST00000601630.5	633	5	-71	-5	8	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGAAGAATAGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	70975822	70966599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_70966819_70968044_70968147_70971014_70971168_70972586_70972712_70975712
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024527	chr8	+	543	3	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	-1	4052	-1	-4052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCTGGGTGGGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	70980403	70983760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70980491_70982040_70982326_70983589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024528	chr8	+	611	3	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	35	4217	35	-4052	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCTGGGTGGGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	70980530	70983760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70980686_70982040_70982326_70983589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024529	chr8	+	767	4	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	1634	3420	1543	-3420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCAGTTACCTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	70982038	70984392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024530	chr8	+	617	4	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	3225	2409	3134	-2409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAACCATAGGACGACT	NA	NA	NA	NA	NA	NA	NA	NA	70983629	70985403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70983760_70983834_70983924_70984171_70984393_70985226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024531	chr8	+	607	4	ISM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	3764	548	3673	-548	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCTGGGTGGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	70984168	70987264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70984393_70985226_70985400_70986766_70986845_70987132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024532	chr8	+	847	4	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	4729	-1	4729	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	70985224	70987978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70985400_70986766_70986845_70987132_70987265_70987516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024533	chr8	+	504	2	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	6625	101	6625	64	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTAGGCCTGGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	70987120	70987876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_70987265_70987516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024534	chr8	+	463	1	NIC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	7020	0	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	70987515	70987978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_70987500_70988000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024535	chr8	+	1363	1	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	51808	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	71044145	71045508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_71044100_71045500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024536	chr8	+	403	3	ISM	ENSMUSG00000019139.11	ENST00000457269.8	1482	9	896	996	896	-996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTCCAGGCTTCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	71048167	71048815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71048205_71048354_71048505_71048599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024537	chr8	+	383	3	ISM	ENSMUSG00000019139.11	ENST00000457269.8	1482	9	1214	766	1214	-766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCCAGACCACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	71048485	71049045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71048505_71048599_71048816_71048897
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024538	chr8	+	354	3	ISM	ENSMUSG00000019139.11	ENST00000457269.8	1482	9	1466	555	1466	-555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGTGGTGGGCGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	71048737	71049256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71048816_71048897_71049063_71049145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024539	chr8	+	374	3	ISM	ENSMUSG00000019139.11	ENST00000457269.8	1482	9	1736	263	1736	-263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATTTTCAGGTGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	71049007	71049548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71049063_71049145_71049260_71049343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024540	chr8	+	356	2	ISM	ENSMUSG00000019139.11	ENST00000457269.8	1482	9	2070	29	2070	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGCACCGGCGATGC	NA	NA	NA	NA	NA	NA	NA	NA	71049341	71049782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71049562_71049646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024541	chr8	-	574	1	ISM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	2129	0	2129	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	71082616	71082042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71082000_71082600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024542	chr8	-	1367	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	14	-1	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	71085092	71082042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_71082825_71083982_71084275_71084799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024543	chr8	-	851	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	201	493	201	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGCGCACCCAAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	71084544	71082535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_71082825_71083982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024544	chr8	-	502	1	ISM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	12802	0	12715	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	71099586	71099084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71099100_71099600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024545	chr8	-	554	2	ISM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	8464	3890	8377	-147	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAATCCATGTCTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	71103924	71102974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71103436_71103831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024546	chr8	+	515	4	ISM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	21	614	21	-381	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCCTGTGAGGATGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	71125918	71130788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024547	chr8	+	405	3	NNC	ENSMUSG00000031848.16	novel	925	5	NA	NA	64	-441	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACCGCAGCAGCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	71125961	71130728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_71126108_71130392_71130527_71130603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024548	chr8	+	716	4	ISM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	3306	0	3122	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	71129203	71131402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71129247_71130427_71130527_71130603_71130785_71131009
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024549	chr8	+	396	1	Genic_Genomic	ENSMUSG00000031848.16	novel	NA	NA	NA	NA	4926	1	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTTCTTCTGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	71131007	71131403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_71131000_71131400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024550	chr8	+	1056	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	612	-1	612	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTCCGCCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	71152210	71153266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_71152200_71153300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024551	chr8	+	1109	4	FSM	ENSMUSG00000031840.15	ENST00000464076.3	1108	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGAGTCTGCTGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	71207356	71211247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_71207518_71209093_71209213_71209783_71209909_71210543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024552	chr8	+	1164	4	NIC	ENSMUSG00000031840.15	novel	1375	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACCCTGCCCAGCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	71207372	71211323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_71207513_71209093_71209213_71209783_71209909_71210543
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024553	chr8	+	718	1	ISM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	3236	42	2406	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACGCAGTCCTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	71210563	71211281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71210600_71211300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024554	chr8	-	105	1	ISM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	2193	0	2193	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	71211399	71211294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71211300_71211400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024555	chr8	-	206	2	ISM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	1707	301	1707	-301	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCACAGGAGATTACCG	NA	NA	NA	NA	NA	NA	NA	NA	71211885	71211595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71211671_71211754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024556	chr8	-	108	2	ISM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	1478	559	1478	-559	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGAACTTCCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	71212114	71211853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71211884_71212036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024557	chr8	-	142	2	ISM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	490	766	490	-766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAATTCTGGGACTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	71213102	71212060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71212114_71213013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024558	chr8	-	136	2	ISM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	164	1817	164	-1817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGCGTCGGGCCTACGAA	NA	NA	NA	NA	NA	NA	NA	NA	71213428	71213111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71213185_71213365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024559	chr8	-	109	2	ISM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	2079	1034	2079	-1034	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCATGCATGAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	71217228	71216452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71216525_71217191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024560	chr8	-	99	2	ISM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	1926	1785	1926	-1785	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGGACCGGTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	71217381	71217203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71217285_71217363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024561	chr8	+	611	1	FSM	ENSMUSG00000100691.2	ENSMUST00000191396.2	1009	1	398	0	398	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGCTGTATCTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	71229856	71230467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_71229900_71230500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024562	chr8	+	845	1	ISM	ENSMUSG00000000791.10	ENSMUST00000000808.8	2873	16	12131	0	12096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCGTCGTGGTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	71273223	71274068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71273200_71274100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024563	chr8	-	518	3	ISM	ENSMUSG00000002910.12	ENST00000379656.7	716	5	1488	-1	1488	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTAGCCAACTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	71290184	71289500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71289665_71289753_71290011_71290087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024564	chr8	-	167	1	NIC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	2005	1	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTAGCCAACTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	71289667	71289500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_71289500_71289700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024565	chr8	-	386	3	ISM	ENSMUSG00000002910.12	ENST00000379656.7	716	5	187	369	187	-369	internal_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCCTGTGGGCCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	71291485	71289870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71290011_71290087_71290182_71291333
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024566	chr8	-	316	3	ISM	ENSMUSG00000002910.12	ENST00000379656.7	716	5	-19	585	-19	-585	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATGGGGAGCTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	71291691	71290086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71290182_71291333_71291486_71291622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024567	chr8	-	498	3	ISM	ENSMUSG00000002910.12	ENST00000222250.5	1011	6	-1	1832	-1	-1832	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCCCATGGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	71292050	71291333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71291486_71291622_71291690_71291771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024568	chr8	-	1346	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTCTGTATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	71326568	71320869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024569	chr8	-	1224	4	ISM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	1091	-9	962	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTCTATAGATGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	71348965	71347356	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024570	chr8	-	1269	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	-2	-7	-2	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGGTCTATAGATGATT	NA	NA	NA	NA	NA	NA	NA	NA	71350058	71347358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024571	chr8	-	1251	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	8	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCATCTGGTCTATAGATG	NA	NA	NA	NA	NA	NA	NA	NA	71350048	71347361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_71348152_71348243_71348354_71348564_71348690_71348776_71348957_71350002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024572	chr8	-	1200	4	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	970	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCATCTGGTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	71348957	71347363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_71348143_71348243_71348354_71348559_71348690_71348776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024573	chr8	-	1238	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	17	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCATCTGGTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	71350039	71347363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_71348152_71348250_71348354_71348559_71348690_71348776_71348957_71350002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024574	chr8	-	1203	4	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	970	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCATCTGGTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	71348957	71347363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_71348152_71348243_71348348_71348559_71348690_71348776
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024575	chr8	-	1227	5	NNC	ENSMUSG00000045128.10	novel	1260	5	NA	NA	18	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATAAGAGGGCATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	71350038	71347371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348948_71350002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024576	chr8	-	267	2	ISM	ENSMUSG00000045128.10	ENSMUST00000212709.2	700	5	25	793	25	-777	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGAAGAAGTCATCCG	NA	NA	NA	NA	NA	NA	NA	NA	71349902	71348819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71348957_71349772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024577	chr8	+	180	2	ISM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	6580	4584	6580	-4584	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACTGTGTCCTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	71365155	71365587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71365298_71365549
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024578	chr8	+	195	1	ISM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	11401	0	11401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGTCTTACTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	71369976	71370171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71370000_71370200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024579	chr8	-	750	3	ISM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	17711	-1	17711	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71707309	71703767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71704189_71705714_71705899_71707164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024580	chr8	-	428	1	Genic_Genomic	ENSMUSG00000035439.14	novel	NA	NA	NA	NA	20825	1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGTGATGCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71704195	71703767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_71703800_71704200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024581	chr8	+	159	2	ISM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	44	2039	44	-2036	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGGGGGCACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	71819904	71820337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71820014_71820287
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024582	chr8	-	352	2	Antisense	novelGene_ENSMUSG00000002395.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAGACATAGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	71821947	71820602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_71820766_71821758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024583	chr8	+	409	3	ISM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	1631	-1	1631	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTCTTCAGTGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	71821491	71822377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71821522_71821775_71821948_71822170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024584	chr8	+	169	1	ISM	ENSMUSG00000002395.15	ENSMUST00000110054.8	973	9	2621	1	2346	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATGTCTTCAGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	71822206	71822375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71822200_71822400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024585	chr8	+	5284	2	FSM	ENSMUSG00000002396.9	ENSMUST00000110052.2	5285	2	5	-4	5	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATATATGCTTTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	71823994	71832009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_71824630_71827360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024586	chr8	+	1597	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	14	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGCCTTGAACCGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	71823996	71826333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024587	chr8	+	1525	3	FSM	ENSMUSG00000002396.9	ENSMUST00000110051.2	2179	3	456	198	408	-198	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATCCAGGGGATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	71824397	71826828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_71824630_71825392_71825447_71825589
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024588	chr8	-	1217	3	ISM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	3509	-1	3509	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCAGCCTCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71831095	71826769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71827399_71828392_71828918_71831032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024589	chr8	-	630	1	Genic_Genomic	ENSMUSG00000002393.15	novel	NA	NA	NA	NA	7205	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCAGCCTCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71827399	71826769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_71826800_71827400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024590	chr8	-	1157	3	ISM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	262	1793	262	-1793	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCTGCTGGCCGCCGCG	NA	NA	NA	NA	NA	NA	NA	NA	71834342	71828563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71828918_71831032_71831128_71833634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024591	chr8	-	508	1	Genic_Genomic	ENSMUSG00000007950.10	novel	NA	NA	NA	NA	6444	1	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTCCAATTTGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	71909855	71909347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_71909300_71909900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024592	chr8	-	820	3	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	5106	242	5106	-242	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCGCGCGGGCTGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	71911193	71909590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71910022_71910681_71910899_71911021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024593	chr8	+	298	2	FSM	ENSMUSG00000034880.8	ENST00000595444.1	297	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAGGGAATAGACTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	71909904	71918119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_71909977_71917893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024594	chr8	-	824	3	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	1969	1338	1969	-1338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGTAGGATCTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	71914330	71910686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71910899_71911021_71911193_71913889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024595	chr8	-	619	2	ISM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	0	4839	0	-4839	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGACCATCCACATCGAC	NA	NA	NA	NA	NA	NA	NA	NA	71916299	71914187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71914617_71916109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024596	chr8	+	209	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	4	394	4	-121	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCAAGCGCAAGCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	71917606	71917997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_71917712_71917893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024597	chr8	+	242	1	NIC	ENSMUSG00000034880.8	novel	607	2	NA	NA	277	3	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGAATAGACTCAGACGC	NA	NA	NA	NA	NA	NA	NA	NA	71917879	71918121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_71917900_71918100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024598	chr8	+	153	1	Genic_Genomic	ENSMUSG00000034880.8	novel	NA	NA	NA	NA	637	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACGTATGTATTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	71918239	71918392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_71918200_71918400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024599	chr8	+	604	3	ISM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	2995	1122	2989	-1122	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCGTGCCAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	71924837	71927620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71924891_71926418_71926481_71927131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024600	chr8	+	1644	2	ISM	ENSMUSG00000074247.11	ENSMUST00000147642.2	1865	4	3009	0	3009	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	71924857	71928742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71924891_71927131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024601	chr8	+	505	2	NNC	ENSMUSG00000074247.11	novel	1933	5	NA	NA	4570	-1173	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCCGGATTGCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	71926418	71927569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_71926486_71927131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024602	chr8	+	1616	1	NIC	ENSMUSG00000074247.11	novel	1933	5	NA	NA	5278	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	71927126	71928742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_71927100_71928700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024603	chr8	+	929	4	ISM	ENSMUSG00000007610.16	ENST00000600625.5	1023	6	727	-178	727	178	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCTTGCCAAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	71943710	71945586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71943854_71944068_71944235_71944783_71945000_71945182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024604	chr8	+	606	3	NNC	ENSMUSG00000007610.16	novel	1023	6	NA	NA	1085	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAGAGCCTGGGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	71944068	71945408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_71944235_71944783_71944998_71945182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024605	chr8	+	448	1	ISM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	4850	0	2613	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTTTCCCTCGAACT	NA	NA	NA	NA	NA	NA	NA	NA	71945596	71946044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71945600_71946000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024606	chr8	-	1174	3	ISM	ENSMUSG00000034845.7	ENST00000252590.9	1185	4	0	9541	0	-9541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCCTTCCCCGCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	71964364	71960244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_71960952_71961107_71961205_71963994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024607	chr8	+	803	2	Antisense	novelGene_ENSMUSG00000034845.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTGGACATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	71960244	71961205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_+_71960958_71961115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024608	chr8	+	437	4	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	15	2675	15	-2675	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGGAGCATCCTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	71995588	71997995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024609	chr8	+	453	4	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	455	2170	455	-2170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACAGAGTGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	71996028	71998500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71996128_71997867_71997995_71998190_71998311_71998393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024610	chr8	+	416	4	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	2294	992	2294	-992	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCAGCACTGTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	71997867	71999678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71997995_71998190_71998311_71998393_71998501_71999616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024611	chr8	+	496	4	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	2815	0	2815	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71998388	72000670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71998501_71999616_71999679_72000221_72000279_72000405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024612	chr8	+	398	3	ISM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	4029	0	4029	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71999602	72000670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_71999679_72000221_72000279_72000405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024613	chr8	+	1100	3	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	15934	0	15934	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	72037504	72039352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72037651_72037989_72038137_72038545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024614	chr8	+	621	1	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	17159	2	17159	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCTGGCTGTTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	72038729	72039350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72038700_72039400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024615	chr8	+	681	4	ISM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	-1	1068	-1	-1068	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAATGGACAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	72044818	72047845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024616	chr8	+	475	2	ISM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	74	2135	74	-2135	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCCCTACCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	72045008	72046778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72045433_72046727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024617	chr8	+	576	4	ISM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	1782	-1	1782	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTTTCTGTGGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72046716	72048914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72046836_72047312_72047415_72047704_72047846_72048700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024618	chr8	-	353	2	Antisense	novelGene_ENSMUSG00000031807.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGGCAGCCAGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	72048913	72047701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_72047840_72048698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024619	chr8	-	355	2	Antisense	novelGene_ENSMUSG00000031807.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGGCAGCCAGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	72048913	72047701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_72047840_72048696
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024620	chr8	+	530	4	ISM	ENSMUSG00000043243.16	ENST00000335393.8	649	5	12	686	12	-686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGGTGAGTGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	72056318	72057672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72056472_72056564_72056724_72057381_72057499_72057571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024621	chr8	+	488	4	ISM	ENSMUSG00000043243.16	ENST00000335393.8	649	5	256	-2	256	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGCTCCCCACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	72056562	72058360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72056724_72057381_72057499_72057571_72057672_72058250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024622	chr8	+	1122	2	ISM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	12093	503	12093	-503	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAACAGAATGTAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	72075734	72077052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72075941_72076136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024623	chr8	+	968	1	Genic_Genomic	ENSMUSG00000034807.10	novel	NA	NA	NA	NA	12947	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGGTTTGGTGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72076588	72077556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_72076600_72077600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024624	chr8	-	424	3	ISM	ENSMUSG00000070000.14	ENST00000252771.11	2570	22	8603	0	8603	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTGCTGCCCTTTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	72162420	72161568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72161735_72161973_72162030_72162218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024625	chr8	-	166	1	NIC	ENSMUSG00000070000.14	novel	3073	26	NA	NA	9288	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTGCTGCCCTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	72161735	72161569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_72161600_72161700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024626	chr8	-	396	3	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	8246	404	8246	-404	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCACAGCTCTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	72162777	72161973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72162030_72162218_72162419_72162637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024627	chr8	-	545	4	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	7269	706	7269	-706	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCCGTGGGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	72163754	72162275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72162419_72162637_72162771_72162982_72163139_72163641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024628	chr8	-	293	3	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	7122	1438	7122	-1438	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAACGCTGACCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	72163901	72163007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72163139_72163641_72163751_72163848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024629	chr8	-	285	3	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	6878	2093	6878	-2093	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTGGCCACAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72164145	72163662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72163751_72163848_72163937_72164036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024630	chr8	-	441	3	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	6084	2278	6084	-2278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGGAACCTTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	72164939	72163847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72163937_72164036_72164144_72164694
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024631	chr8	-	428	3	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	5812	2487	5812	-2487	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGCAATGGGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	72165211	72164056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72164144_72164694_72164938_72165113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024632	chr8	-	289	2	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	4761	-3974	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTCTCACCGGGACATG	NA	NA	NA	NA	NA	NA	NA	NA	72166262	72165543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_72165629_72166058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024633	chr8	-	284	2	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	4707	4374	4707	-4374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTAGCTGGCTGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72166316	72165943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72165970_72166058
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024634	chr8	-	371	3	NNC	ENSMUSG00000070000.14	novel	2570	22	NA	NA	3462	-4488	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGGTTGTTAACGT	NA	NA	NA	NA	NA	NA	NA	NA	72167561	72166057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_72166317_72167343_72167417_72167522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024635	chr8	-	362	3	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	1453	6756	1453	-6756	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGGGCCACAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	72169570	72168325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72168428_72169200_72169306_72169415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024636	chr8	-	347	3	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	1095	7685	1095	-7685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAACTCAGCCCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	72169928	72169254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72169306_72169415_72169569_72169785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024637	chr8	-	223	2	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	867	8212	867	-8212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGCCCCAGCAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	72170156	72169781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72169928_72170079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024638	chr8	+	1102	1	ISM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	10676	0	10676	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	72687371	72688473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72687400_72688500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024639	chr8	+	2274	1	ISM	ENSMUSG00000052446.18	ENSMUST00000131237.8	2689	4	17022	0	16969	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72721903	72724177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72721900_72724200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024640	chr8	+	3955	1	ISM	ENSMUSG00000046881.8	ENSMUST00000210435.4	8718	2	7153	0	4707	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCAACTTGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72868036	72871991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72868000_72872000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024641	chr8	+	2025	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	131	2	131	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	72889203	72906984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024642	chr8	-	1237	2	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAAGAAAAGAGTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	72906754	72901039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr8_-_72901105_72905582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024643	chr8	+	1242	1	Genic_Genomic	ENSMUSG00000031799.11	novel	NA	NA	NA	NA	16098	5	mono-exon	FALSE	NA	NA	NA	NA	NA	1502	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATTCTTTTAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	72905749	72906991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_72905700_72907000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024644	chr8	+	395	5	ISM	ENSMUSG00000003037.17	ENST00000586682.1	663	8	25	4261	25	-4261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTTGCCCTCGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	72915222	72929774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024645	chr8	+	536	7	ISM	ENSMUSG00000003037.17	ENST00000586682.1	663	8	7071	0	7071	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGGCCAGCCTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	72922268	72934035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931483_72931515_72933888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024646	chr8	+	467	5	NNC	ENSMUSG00000003037.17	novel	663	8	NA	NA	9890	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGGCCAGCCTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	72925087	72934035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72933859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024647	chr8	+	987	2	ISM	ENSMUSG00000003037.17	ENST00000586682.1	663	8	16266	-789	16266	789	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACCCAGTTGTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	72931463	72934824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72931515_72933888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024648	chr8	+	963	1	Genic_Genomic	ENSMUSG00000003037.17	novel	NA	NA	NA	NA	21589	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTGCAGTAGCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72936786	72937749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_72936800_72937700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024649	chr8	-	206	2	ISM	ENSMUSG00000074240.6	ENSMUST00000098630.5	585	5	7073	31	7073	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCTCAGAGGACAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	72959590	72958252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72958275_72959406
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024650	chr8	-	323	2	ISM	ENSMUSG00000074240.6	ENSMUST00000098630.5	585	5	5543	1208	5543	-1177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAGCTCCAGACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	72961120	72959429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72959603_72960970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024651	chr8	-	199	2	ISM	ENSMUSG00000074240.6	ENST00000379859.7	417	4	0	2718	0	-2718	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTACAGGGCCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	72966818	72960970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_72961119_72966767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024652	chr8	+	967	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	87	1510	87	-1510	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGAAGAGTTTCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	72973660	72976752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024653	chr8	+	755	2	NNC	ENSMUSG00000003039.10	novel	2564	4	NA	NA	2208	-1520	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGGACCACTTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	72975781	72976742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_72975820_72976025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024654	chr8	+	773	1	Genic_Genomic	ENSMUSG00000003039.10	novel	NA	NA	NA	NA	3918	2	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTGCAGTCCTAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	72977491	72978264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_72977500_72978300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024655	chr8	+	473	3	ISM	ENSMUSG00000003033.16	ENST00000590756.5	1205	10	3	5932	3	-5932	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCCTTTTCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	72993905	73004674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_72994098_73003592_73003724_73004524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024656	chr8	+	492	4	ISM	ENSMUSG00000003033.16	ENST00000444449.6	1390	12	9000	4899	9000	-4899	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCGTGAGTACCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	73002966	73005707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73003025_73003592_73003724_73004524_73004673_73005552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024657	chr8	+	474	4	ISM	ENSMUSG00000003033.16	ENST00000590756.5	1205	10	10639	3481	10575	-3481	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTGAGAGGAGAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	73004541	73007125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73004673_73005586_73005714_73006678_73006822_73007052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024658	chr8	+	1015	4	ISM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	13454	0	13349	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73007315	73011229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73007478_73009540_73009667_73009950_73010027_73010578
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024659	chr8	+	1584	2	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	539	0	539	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTGGGGTTTAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	73073415	73075500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73074087_73074587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024660	chr8	+	911	1	ISM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	1713	0	1713	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTGGGGTTTAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	73074589	73075500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73074600_73075500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024661	chr8	-	362	1	Genic_Genomic	ENSMUSG00000006276.11	novel	NA	NA	NA	NA	80095	4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGACTATCTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73095200	73094838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_73094800_73095200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024662	chr8	+	507	2	ISM	ENSMUSG00000052794.14	ENSMUST00000121902.2	2373	8	-38	15481	14	-15481	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCACACAGAACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	73197737	73199004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73197834_73198593
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024663	chr8	+	497	2	ISM	ENSMUSG00000052794.14	ENSMUST00000121902.2	2373	8	1264	10970	1264	-10970	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCAGCAGGACGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	73199039	73203515	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73199315_73203293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024664	chr8	-	305	1	Genic_Genomic	ENSMUSG00000052488.8	novel	NA	NA	NA	NA	14330	4	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	73214633	73214328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_73214300_73214600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024665	chr8	-	316	2	ISM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	10855	2659	10748	-2659	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGAATGCCACACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	73218215	73217132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_73217161_73217927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024666	chr8	-	514	3	ISM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	7302	3714	7195	-3714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGAACAATCAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	73221768	73218187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_73218364_73220226_73220403_73221606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024667	chr8	-	439	3	ISM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	4888	7886	4888	-7745	internal_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGGGCTGCTGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	73224075	73222218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_73222364_73223707_73223860_73223933
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024668	chr8	-	300	2	ISM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	440	10301	333	-10301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAACAGAGCCAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	73228630	73224774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_73224900_73228455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024669	chr8	-	2988	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	12	-3	12	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTTGGAATCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	73302102	73248401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_73250951_73251366_73251442_73301738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024670	chr8	+	367	1	FSM	ENSMUSG00000110532.2	ENSMUST00000212739.2	178	1	-58	-131	-58	131	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCACAAGAATCAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	73284816	73285183	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_73284800_73285200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024671	chr8	-	1602	1	ISM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	4299	0	4260	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTCTATCTACTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	73320633	73319031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_73319000_73320600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024672	chr8	-	1738	3	ISM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	1071	1026	1032	-1026	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGTCTAAGTTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	73323861	73320057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_73321653_73322699_73322791_73323809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024673	chr8	-	1587	2	NNC	ENSMUSG00000044600.15	novel	642	4	NA	NA	2100	-1126	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAATCCCAAGTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	73322793	73320157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_73321653_73322701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024674	chr8	+	826	2	ISM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	12644	696	12644	411	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTAGCATGGAGACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	73338560	73340430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_73338662_73339705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024675	chr8	+	821	1	Genic_Genomic	ENSMUSG00000031791.9	novel	NA	NA	NA	NA	14391	2	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTTCTTTATTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	73340307	73341128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_73340300_73341100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024676	chr8	+	1026	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTATGTGCAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	73449911	73466535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024677	chr8	+	377	2	ISM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	6457	31025	6457	-30966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGATGGCTTAAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	75726440	75727575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75726520_75727277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024678	chr8	+	410	1	ISM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	38207	0	15341	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGTCCAGTCTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	75758190	75758600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75758200_75758600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024679	chr8	+	1367	4	ISM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	2286	-1	2286	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAAGTGCATTCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75822534	75827218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75822605_75823477_75823970_75825393_75825494_75826513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024680	chr8	+	346	3	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	161	17260	161	-17260	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAGTTTATTGAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	75836412	75837056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75836503_75836717_75836845_75836927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024681	chr8	+	334	2	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	2918	13365	2918	-13365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTAAGTATGTAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	75839169	75840951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75839345_75840792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024682	chr8	+	496	3	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	4541	9994	4541	-9994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGGTCTGGGAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	75840792	75844322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75840949_75842479_75842647_75844149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024683	chr8	+	335	3	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	7897	6859	7897	-6859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGGACCCCTCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	75844148	75847457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75844322_75845884_75845997_75847407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024684	chr8	+	415	3	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	11919	3718	11919	-3718	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGTGGGCTCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	75848170	75850598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75848343_75849619_75849733_75850468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024685	chr8	+	576	3	ISM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	15200	138	15200	-138	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGGAGCAGGAACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	75851451	75854178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75851572_75852864_75852993_75853850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024686	chr8	+	423	1	ISM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	17703	745	17648	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGCTGTGTGAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	75853899	75854322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_75853900_75854300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024687	chr8	+	346	1	Genic_Genomic	ENSMUSG00000005410.7	novel	NA	NA	NA	NA	18471	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTGAAGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	75854722	75855068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_75854700_75855100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024688	chr8	+	1697	2	ISM	ENSMUSG00000031618.14	ENSMUST00000109911.8	3804	8	-249	334011	6	-332878	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGATAAAGACTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	77628854	77636281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_77629169_77634898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024689	chr8	+	1988	4	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	378	56415	378	-56415	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGACCGCGGGCTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	77635278	77912744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_77636658_77812155_77812308_77881830_77881948_77912404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024690	chr8	+	1824	4	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	279248	-1234	279248	101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTTGGAAGGGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	77914148	77970393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_77914294_77937272_77937404_77944056_77944215_77969003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024691	chr8	+	1431	2	ISM	ENSMUSG00000031618.14	ENSMUST00000034031.6	2955	8	309144	-1105	309144	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCTTCTTCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	77944044	77970264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_77944215_77969003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024692	chr8	+	1435	1	Genic_Genomic	ENSMUSG00000031618.14	novel	NA	NA	NA	NA	335307	1	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTCCTGGAACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	77970207	77971642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_77970200_77971600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024693	chr8	-	751	1	Genic_Genomic	ENSMUSG00000031617.17	novel	NA	NA	NA	NA	13925	4	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTACGTGTCTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78323357	78322606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_78322600_78323400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024694	chr8	-	805	2	ISM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	12682	557	12682	-557	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCCAATATCAAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	78324600	78323167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_78323810_78324437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024695	chr8	-	148	1	NIC	ENSMUSG00000031616.8	novel	3625	8	NA	NA	55317	1	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGCAGAAACACCGAGACG	NA	NA	NA	NA	NA	NA	NA	NA	78391749	78391601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_78391600_78391700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024696	chr8	-	388	3	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	52503	0	52503	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGCAGAAACACCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	78394563	78391602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_78391746_78393951_78394061_78394427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024697	chr8	-	317	3	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	48763	2433	48763	-2433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATTAACCTGGCAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	78398303	78394035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_78394061_78394427_78394562_78398145
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024698	chr8	-	336	2	ISM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	227	6543	227	-6543	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAACACAATTCACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78446839	78398145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_78398299_78446656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024699	chr8	+	920	6	ISM	ENSMUSG00000037101.17	ENST00000504425.5	1161	8	0	14401	0	-14401	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGAGCTCCGTGCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	78972731	79052220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_78972952_78978351_78978538_79003371_79003585_79008930_79009017_79042301_79042394_79052097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024700	chr8	-	636	1	ISM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	2994	0	2975	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	79232533	79231897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_79231900_79232500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024701	chr8	-	686	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	18	918	18	-918	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGGCGGAAGAACACCAG	NA	NA	NA	NA	NA	NA	NA	NA	79235490	79232823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_79233447_79235427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024702	chr8	-	644	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	1	1050	1	-1042	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAACTTTAACATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	79235526	79232947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_79233493_79235427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024703	chr8	+	636	3	FSM	ENSMUSG00000031684.12	ENST00000502607.1	638	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATGCTAGACCATC	NA	NA	NA	NA	NA	NA	NA	NA	79236000	79245966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_79236304_79242214_79242298_79245716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024704	chr8	+	902	1	Genic_Genomic	ENSMUSG00000031684.12	novel	NA	NA	NA	NA	223529	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGAAATGTCGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	79459732	79460634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_79459700_79460600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024705	chr8	-	2349	1	ISM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	13927	0	6001	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATCTTTCCCATCTATG	NA	NA	NA	NA	NA	NA	NA	NA	79533842	79531493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_79531500_79533800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024706	chr8	-	2657	4	ISM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	1053	1044	1053	542	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTTTGGTTTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	79546716	79532537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024707	chr8	-	2109	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTTGCCACCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79547769	79533077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024708	chr8	-	190	1	NIC	ENSMUSG00000031683.17	novel	3792	5	NA	NA	4968	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGACTCTTAAGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	79534875	79534685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_79534700_79534900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024709	chr8	-	269	2	ISM	ENSMUSG00000031683.17	ENSMUST00000146824.2	541	3	84	1889	84	-1889	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGCTTCCCTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	79539759	79536575	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_79536690_79539604
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024710	chr8	+	732	2	ISM	ENSMUSG00000071064.16	ENSMUST00000087927.11	2801	3	219	10930	3	-10930	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTGAGTCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	79755284	79787536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79755359_79786878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024711	chr8	+	1697	3	ISM	ENSMUSG00000071064.16	ENST00000513840.2	2285	5	31597	9973	31578	4703	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTTAGGGTTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	79786878	79803169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79787920_79796999_79797173_79802686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024712	chr8	+	1166	3	ISM	ENSMUSG00000071064.16	ENST00000513840.2	2285	5	41719	0	41700	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAGCGACAGGCACCTAG	NA	NA	NA	NA	NA	NA	NA	NA	79797000	79813142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79797173_79802686_79803168_79812629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024713	chr8	+	521	2	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	47531	98471	47531	5504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGACATGTCGGCCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	79802831	79818646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79803168_79818461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024714	chr8	+	458	2	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	63159	72092	63159	31883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTCAGCTCTCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	79818459	79845025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79818696_79844803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024715	chr8	+	301	2	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	89500	69948	89500	34027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTAGCTCTGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79844800	79847169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79845044_79847111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024716	chr8	+	481	3	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	147158	10276	147158	-10276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCACCCCTGTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	79902458	79906841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79902600_79905536_79905709_79906673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024717	chr8	+	439	3	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	150330	4697	150330	-4697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGGGTAGACGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	79905630	79912420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79905709_79906673_79906841_79912226
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024718	chr8	+	453	3	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	151462	4130	151462	-4130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCAAGTACAGAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	79906762	79912987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79906841_79912226_79912419_79912804
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024719	chr8	+	1222	3	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	156923	0	156923	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCAAAAACCAAGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	79912223	79917131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79912419_79912804_79912996_79916295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024720	chr8	+	547	3	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	157502	483	157502	-483	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGAGTGCCTGTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	79912802	79916634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79912983_79914782_79914811_79916295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024721	chr8	+	359	1	ISM	ENSMUSG00000071064.16	ENSMUST00000098614.9	7581	15	161696	3252	161461	3	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGCGTTCTGTACCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79916761	79917120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_79916800_79917100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024722	chr8	-	1966	1	Genic_Genomic	ENSMUSG00000037022.4	novel	NA	NA	NA	NA	29375	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTATCTTGTTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	79992191	79990225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_79990200_79992200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024723	chr8	-	415	1	ISM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	60709	0	60709	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTTTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	80065438	80065023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_80065000_80065400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024724	chr8	+	528	2	ISM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	3	33887	3	-33835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTGTTAACCTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	80366249	80370466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_80366694_80370382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024725	chr8	-	968	1	Genic_Genomic	ENSMUSG00000058355.9	novel	NA	NA	NA	NA	27315	4	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGACTTCTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	80411054	80410086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_80410100_80411100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024726	chr8	-	1166	3	ISM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	24176	886	24176	-886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGTGGACAGTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	80414193	80410976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_80411907_80412573_80412686_80414069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024727	chr8	+	514	3	ISM	ENSMUSG00000036977.9	ENST00000613466.4	1097	5	1	55644	1	-55644	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCCATTTCTTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	80438062	80446377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_80438359_80439781_80439909_80446286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024728	chr8	+	3437	4	ISM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	1329	-705	1298	705	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAACCTCAAAACAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	80439777	80504654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_80439909_80446286_80446378_80455758_80455880_80501560
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024729	chr8	+	467	1	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	63076	1	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTAAACTGAAAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80501555	80502022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_80501600_80502000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024730	chr8	+	3468	1	Genic_Genomic	ENSMUSG00000036977.9	novel	NA	NA	NA	NA	63767	26	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACTCCCAGGCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	80502246	80505714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_80502200_80505700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024731	chr8	-	818	1	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	40173	0	40173	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGGTAAGTCTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	81425953	81425135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_81425100_81426000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024732	chr8	-	866	2	ISM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	37297	1829	37297	-1829	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAGGTGATTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	81428829	81426964	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_81427758_81428756
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024733	chr8	-	1271	2	ISM	ENSMUSG00000038250.10	ENST00000682469.1	4435	10	32759	-4	32759	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGGCCGTTCAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	81708328	81706955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_81707239_81707340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024734	chr8	-	2002	2	ISM	ENSMUSG00000038250.10	ENST00000682469.1	4435	10	28991	678	28991	-276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATTATAATTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	81712096	81707637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_81708610_81711066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024735	chr8	-	1050	2	ISM	ENSMUSG00000038250.10	ENST00000682469.1	4435	10	26926	4466	26926	-4064	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATACCAGATGTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	81714161	81711425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_81712430_81714115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024736	chr8	-	1138	4	ISM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	404	20320	-66	-20320	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTACGGTGGAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	81741153	81727681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_81727784_81731960_81732091_81738795_81738932_81740383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024737	chr8	-	285	1	NIC	ENSMUSG00000031712.11	novel	1251	8	NA	NA	12446	13	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCTCAGACTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	83058656	83058371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_83058400_83058700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024738	chr8	-	462	3	ISM	ENSMUSG00000031712.11	ENST00000514653.5	761	5	6854	-1	6854	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAAGAGCTCGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	83064248	83058383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_83058654_83061097_83061236_83064194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024739	chr8	-	418	4	ISM	ENSMUSG00000031712.11	ENST00000514653.5	761	5	1058	211	1058	-211	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTGCAAAGCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	83070044	83058595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_83058654_83061097_83061236_83064194_83064240_83069867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024740	chr8	-	356	3	ISM	ENSMUSG00000031712.11	ENST00000514653.5	761	5	-2	5810	-2	-5810	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATAGTTAGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83071104	83064194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_83064240_83069867_83070042_83070967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024741	chr8	-	402	3	ISM	ENSMUSG00000031712.11	ENST00000477265.5	901	6	29	11501	29	-11501	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAAGCCTTATTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83072340	83069885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_83070042_83070967_83071102_83072228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024742	chr8	-	1239	5	ISM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	6858	-8	6858	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTGAGTTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83493931	83490241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024743	chr8	+	1215	4	ISM	ENSMUSG00000047747.11	ENST00000306799.7	2272	7	142700	-1	142700	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCTGTCAGGGGCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	83732956	83810886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_83733042_83762653_83762751_83769200_83769412_83810064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024744	chr8	-	180	2	ISM	ENSMUSG00000063253.12	ENSMUST00000212449.2	280	4	4813	0	386	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATACAGCACCAGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	84164266	84157138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84157234_84164181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024745	chr8	-	1549	1	Genic_Genomic	ENSMUSG00000063253.12	novel	NA	NA	NA	NA	1981	1	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84162671	84161122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_84161100_84162700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024746	chr8	-	1642	3	ISM	ENSMUSG00000063253.12	ENSMUST00000212905.2	798	4	203	-928	-20	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCAAGTTCTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	84164672	84161170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84162670_84164181_84164266_84164613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024747	chr8	-	1414	2	FSM	ENSMUSG00000063253.12	ENST00000506597.2	1575	2	1	160	1	-149	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGGAATTATCTAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	84164651	84161293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_84162670_84164613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024748	chr8	-	580	3	ISM	ENSMUSG00000063253.12	ENSMUST00000167525.3	1764	4	4449	1100	-35	-146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGCACTGTCTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	84164687	84162244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84162670_84164181_84164263_84164613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024749	chr8	+	627	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTGTGCTACTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	84293296	84298256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_84293560_84297458_84297628_84298061
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024750	chr8	-	430	4	ISM	ENSMUSG00000031708.18	ENSMUST00000212990.2	648	7	486	0	486	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	84299083	84298326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024751	chr8	+	366	2	Antisense	novelGene_ENSMUSG00000031708.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCTGGCATGGAGGATAA	NA	NA	NA	NA	NA	NA	NA	NA	84298326	84298945	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_+_84298567_84298819
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024752	chr8	-	241	1	NIC	ENSMUSG00000031708.18	novel	648	7	NA	NA	1002	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	84298567	84298326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_84298300_84298600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024753	chr8	-	366	2	NNC	ENSMUSG00000031708.18	novel	1334	12	NA	NA	619	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	84298950	84298328	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_84298595_84298850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024754	chr8	-	443	5	ISM	ENSMUSG00000031708.18	ENSMUST00000238997.2	1334	12	1519	849	-383	-849	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGAGGCTGGGGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	84299952	84299177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024755	chr8	-	433	5	ISM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	20580	981	938	-981	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGGTCCAGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84300533	84299309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024756	chr8	-	452	5	ISM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	16	1328	9	-1328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGGGCCCGGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84321097	84299656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024757	chr8	+	2999	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGAGGTGCTCGGCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	84334822	84339286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_84335172_84336442_84337024_84337217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024758	chr8	+	382	2	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	0	3415	0	-3415	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATCAGGACCAAGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	84379305	84387908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84379367_84387587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024759	chr8	+	693	3	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	8278	2279	8278	-2279	internal_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCATCCTTGCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	84387583	84389044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84387910_84388583_84388770_84388863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024760	chr8	-	313	2	Antisense	novelGene_ENSMUSG00000019433.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGCCCCAGTCCCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	84388631	84387644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_84387902_84388575
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024761	chr8	+	490	3	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	9268	1533	9268	-1533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAGCCACCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	84388573	84389790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84388770_84388863_84389045_84389677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024762	chr8	+	677	4	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	9556	278	9556	-278	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCCCACTCCAATCAG	NA	NA	NA	NA	NA	NA	NA	NA	84388861	84391045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84389045_84389677_84389791_84390548_84390631_84390746
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024763	chr8	+	338	1	Genic_Genomic	ENSMUSG00000019433.10	novel	NA	NA	NA	NA	11681	1	mono-exon	FALSE	NA	NA	NA	NA	NA	244	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTCATTCTGTAGACC	NA	NA	NA	NA	NA	NA	NA	NA	84390986	84391324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_84391000_84391300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024764	chr8	-	912	1	Genic_Genomic	ENSMUSG00000057672.17	novel	NA	NA	NA	NA	25494	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAAAATGTGAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	84394073	84393161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_84393200_84394100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024765	chr8	+	741	5	ISM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	37	2208	37	-2208	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATCCTACTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	84441842	84447769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024766	chr8	+	739	5	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	3836	1496	3836	-1496	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGGTGACGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	84446012	84448481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024767	chr8	+	767	6	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	4263	790	4263	-790	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCATGAGTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84446439	84449187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024768	chr8	+	752	6	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	4999	588	4999	-588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCAGAGGACTCAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	84447175	84449389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024769	chr8	+	880	6	ISM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	6185	-1	6185	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACGTGCCATCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84448361	84449978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024770	chr8	-	325	1	ISM	ENSMUSG00000002885.15	ENSMUST00000166939.8	2980	18	17638	113	17481	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	84450317	84449992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84450000_84450300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024771	chr8	-	463	3	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	16912	243	16912	-241	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCCTTGAGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	84450886	84450233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84450532_84450607_84450707_84450820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024772	chr8	-	302	2	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	16169	1256	16169	-1254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTCTCTGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	84451629	84451246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84451317_84451397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024773	chr8	-	503	3	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	15140	1491	15140	-1489	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGGCTACGGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	84452658	84451481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84451628_84451783_84451976_84452493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024774	chr8	-	374	2	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	13200	2519	13200	-2517	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTACCATGTGCAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	84454598	84452509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84452659_84454373
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024775	chr8	-	415	3	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	12822	4376	12822	-4374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAACTGGAGAGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	84454976	84454366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84454598_84454723_84454841_84454909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024776	chr8	-	321	3	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	12070	4732	12070	-4730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGTCCAGAGAGGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	84455728	84454722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84454841_84454909_84455070_84455685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024777	chr8	-	446	3	ISM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	7605	6018	7601	-6018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCTGACCCAGCCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	84460197	84456010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84456155_84456739_84456887_84460042
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024778	chr8	-	317	3	ISM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	7130	6765	7126	-6765	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCACAGTGTGCGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	84460672	84456757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84456887_84460042_84460196_84460637
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024779	chr8	-	325	3	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	6819	10052	6819	-10050	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGAGCCCCCCCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	84460979	84460042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84460196_84460637_84460755_84460924
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024780	chr8	+	501	2	ISM	ENSMUSG00000013033.17	ENSMUST00000131717.2	5152	21	5721	8942	5721	-8918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACACCCAGTGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	84656500	84657698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84656894_84657590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024781	chr8	+	1791	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGCTTTTTTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	84682133	84696827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024782	chr8	+	1783	4	NNC	ENSMUSG00000005470.9	novel	1788	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTTTTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84682134	84696826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_84682567_84691659_84691776_84694462_84694640_84695768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024783	chr8	+	457	3	FSM	ENSMUSG00000005470.9	ENST00000592798.5	452	3	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGCCAGGTAGAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	84682434	84695971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_84682567_84691659_84691776_84695762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024784	chr8	+	449	3	NNC	ENSMUSG00000005470.9	novel	452	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGGAGCCAGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84682436	84695967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_84682567_84691659_84691780_84695768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024785	chr8	+	452	3	NNC	ENSMUSG00000005470.9	novel	452	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGGAGCCAGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84682439	84695967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_84682567_84691659_84691780_84695762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024786	chr8	+	442	3	NNC	ENSMUSG00000005470.9	novel	452	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGGGGAGCCAGGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84682439	84695967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_84682567_84691659_84691776_84695768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024787	chr8	-	1152	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	199	0	199	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTGCAAGCTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84738588	84736850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_84737122_84737339_84737402_84737769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024788	chr8	-	1594	2	FSM	ENSMUSG00000056753.4	ENSMUST00000071067.4	1849	2	255	0	255	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGCCCTGTAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	84793661	84791864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_84793433_84793635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024789	chr8	+	1139	5	FSM	ENSMUSG00000012889.9	ENST00000254320.7	1144	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTAACTACAATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	84853858	84857823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_84853951_84854413_84854524_84855198_84855356_84855892_84856009_84857159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024790	chr8	+	1122	5	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	1865	480	629	-480	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGCAGGGGAGTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	84854482	84858676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84854524_84855198_84855356_84855892_84856009_84857159_84857818_84858526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024791	chr8	+	1310	4	ISM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	3294	0	2058	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCAGTCCCAGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	84855911	84859156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_84856009_84857159_84857818_84858526_84858676_84858750
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024792	chr8	-	621	2	FSM	ENSMUSG00000056155.7	ENSMUST00000070102.6	730	2	7	102	7	-76	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGCTTAGGACTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	84903174	84900463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_84900602_84902691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024793	chr8	+	2181	1	FSM	ENSMUSG00000103593.2	ENSMUST00000193908.2	2181	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCATGATGAAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84927497	84929678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_84927500_84929700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024794	chr8	-	628	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	-8	-4	-8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTGTTTGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	84976356	84972862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_84973323_84976102_84976159_84976244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024795	chr8	-	462	1	Genic_Genomic	ENSMUSG00000019362.9	novel	NA	NA	NA	NA	3022	2	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTGCTGTTTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	84973326	84972864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_84972900_84973300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024796	chr8	-	597	3	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84976339	84972866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_84973313_84976102_84976159_84976244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024797	chr8	-	609	3	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84976347	84972866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_84973323_84976102_84976153_84976244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024798	chr8	-	543	2	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84976319	84972866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_84973323_84976232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024799	chr8	-	597	3	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84976339	84972866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_84973323_84976112_84976159_84976244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024800	chr8	-	599	3	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84976327	84972866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_84973323_84976098_84976159_84976244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024801	chr8	+	577	2	Antisense	novelGene_ENSMUSG00000019362.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGCCATGTTCTACCGCA	NA	NA	NA	NA	NA	NA	NA	NA	84972866	84976323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_+_84973325_84976204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024802	chr8	-	588	2	NNC	ENSMUSG00000019362.9	novel	616	3	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84976343	84972866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_84973356_84976244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024803	chr8	-	2818	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTTTTACAATACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	84983952	84976534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024804	chr8	-	922	4	ISM	ENSMUSG00000004996.10	ENST00000319545.12	936	5	-1	73760	-1	-1686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTCAGAGGGACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	84983895	84978220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84978341_84980491_84980717_84980804_84980982_84983495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024805	chr8	-	913	4	NNC	ENSMUSG00000004996.10	novel	936	5	NA	NA	3	-1695	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCCGTCTTCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84983891	84978229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_84978341_84980491_84980717_84980800_84980982_84983495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024806	chr8	-	507	1	Genic_Genomic	ENSMUSG00000004994.13	novel	NA	NA	NA	NA	12049	3	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGAATTAAAATCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	84984927	84984420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_84984400_84984900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024807	chr8	-	944	3	ISM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	9660	0	9660	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCTTGTTTCTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	84987316	84984929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84985556_84986922_84987096_84987171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024808	chr8	-	683	3	ISM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	10008	667	9975	-161	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAGCCATGACGCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	84987001	84985090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_84985556_84985741_84985881_84986922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024809	chr8	-	1531	1	FSM	ENSMUSG00000053560.6	ENSMUST00000060427.6	1524	1	-5	-2	-5	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2680	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTCTGGCTTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	85389488	85387957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_85388000_85389500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024810	chr8	-	1871	1	ISM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	15553	0	15553	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	85398978	85397107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85397100_85399000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024811	chr8	-	965	1	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	67720	0	67720	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTGAGTCTTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	85432305	85431340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85431300_85432300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024812	chr8	-	1124	3	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	57105	3085	57105	747	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGCCCTTGCTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	85442920	85434425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85435307_85440394_85440487_85442769
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024813	chr8	+	717	2	FSM	ENSMUSG00000074203.5	ENSMUST00000098571.5	721	2	6	-2	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGCTCACATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	85449641	85453475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85449901_85453017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024814	chr8	-	761	4	ISM	ENSMUSG00000001911.17	ENST00000587760.5	1496	10	1081	18610	1081	-18528	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTCCATCACCTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	85498944	85453782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85453874_85454233_85454309_85454533_85454597_85498412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024815	chr8	-	1663	4	ISM	ENSMUSG00000001911.17	ENSMUST00000109762.8	2261	9	11	18991	11	-18991	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATCACAGAGTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	85500987	85454245	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85454309_85454533_85454597_85498412_85498945_85499982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024816	chr8	-	1075	1	ISM	ENSMUSG00000053226.8	ENSMUST00000065539.6	1585	2	6345	0	6345	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCGTGCTTCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85543107	85542032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85542000_85543100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024817	chr8	-	1530	2	FSM	ENSMUSG00000053226.8	ENSMUST00000065539.6	1585	2	25	30	25	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGGAACCATAAAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	85549427	85542062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_85543163_85548997
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024818	chr8	+	168	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	1029	1297	1029	-1297	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAAATTCAGGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	85559179	85560814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85559270_85560736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024819	chr8	-	312	1	ISM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	5678	0	5678	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCATCTGCTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	85561592	85561280	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85561300_85561600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024820	chr8	-	1273	5	ISM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	2529	-1	2505	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTTCTCACAGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	85564765	85561538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024821	chr8	+	131	1	Genic_Genomic	ENSMUSG00000033751.6	novel	NA	NA	NA	NA	3831	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATATACTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	85561981	85562112	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_85562000_85562100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024822	chr8	-	314	3	ISM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	2013	3150	1989	-3150	internal_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGAGGGCCAGCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	85565281	85564689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85564764_85564901_85564958_85565097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024823	chr8	-	472	3	ISM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	44	3558	20	-3558	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAAAGGGCAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	85567250	85565097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85565280_85565422_85565585_85567122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024824	chr8	-	659	1	Genic_Genomic	ENSMUSG00000003814.9	novel	NA	NA	NA	NA	4364	8	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTTGGTTAAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	85569129	85568470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_85568500_85569100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024825	chr8	-	1187	5	ISM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	2149	371	2079	-45	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTCATCCCCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	85571414	85568849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024826	chr8	-	598	2	ISM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	3888	500	3818	-174	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGGAACAGGGGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	85569675	85568978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85569474_85569572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024827	chr8	-	566	4	ISM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	1898	1887	1898	-1887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACATAGGAAAGACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	85571595	85570691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85570838_85571006_85571121_85571202_85571413_85571499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024828	chr8	-	729	5	ISM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	510	2201	510	-2201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTTGGGTGTTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	85572983	85571005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024829	chr8	-	829	5	ISM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	-69	2406	1	-2406	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGAGGTTAGTGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	85573562	85571210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024830	chr8	+	545	4	ISM	ENSMUSG00000003808.19	ENST00000423140.6	1560	12	-23	7681	5	-7681	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGCTGCAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	85583622	85588060	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024831	chr8	+	340	3	NNC	ENSMUSG00000003808.19	novel	1560	12	NA	NA	56	-7888	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTCCTGCAGGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	85583701	85587853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_85583806_85587534_85587673_85587755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024832	chr8	+	438	4	ISM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	4122	4888	4122	-4743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGGATGGGGGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	85587767	85590998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85587855_85587940_85588060_85590686_85590780_85590859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024833	chr8	+	342	3	NNC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	4294	-4751	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACAGGGCCTGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	85587939	85590990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_85588058_85590686_85590780_85590859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024834	chr8	+	338	3	ISM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	7041	4705	7041	-4560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTAGCCCGGGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	85590686	85591181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85590780_85590859_85590989_85591065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024835	chr8	+	432	4	ISM	ENSMUSG00000003808.19	ENST00000423140.6	1560	12	7212	1464	7212	-1464	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGCTTGGCCTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	85590857	85594277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85590989_85591065_85591182_85594005_85594091_85594177
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024836	chr8	+	472	4	ISM	ENSMUSG00000003808.19	ENST00000423140.6	1560	12	7419	1193	7419	-1193	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCAGTCGAGCCAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	85591064	85594548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85591182_85594005_85594091_85594177_85594278_85594378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024837	chr8	+	463	4	ISM	ENSMUSG00000003808.19	ENST00000423140.6	1560	12	10531	774	10531	-774	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCTCGTTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	85594176	85594967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85594278_85594378_85594548_85594637_85594716_85594852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024838	chr8	+	687	4	ISM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	10752	48	10752	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAATAAAGTGGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	85594397	85595838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85594548_85594637_85594716_85594852_85594968_85595494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024839	chr8	+	391	1	ISM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	11878	0	11850	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	85595495	85595886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85595500_85595900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024840	chr8	-	292	1	Genic_Genomic	ENSMUSG00000003809.15	novel	NA	NA	NA	NA	7234	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATACTTTGGCTTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	85613312	85613020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_85613000_85613300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024841	chr8	-	335	2	ISM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	5307	410	5307	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTTAACTGGATGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	85615239	85613431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85613683_85615155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024842	chr8	-	328	3	ISM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	753	6059	753	-6059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACCTATGGGAGCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	85619793	85619080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85619202_85619459_85619523_85619649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024843	chr8	-	166	2	ISM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	120	7186	116	-7186	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCGGCGGCCGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	85620430	85620207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85620314_85620370
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024844	chr8	-	526	1	Genic_Genomic	ENSMUSG00000052926.17	novel	NA	NA	NA	NA	8882	6	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTATCTATTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	85683758	85683232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_85683200_85683800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024845	chr8	-	809	4	ISM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	5946	757	5946	300	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAAGACATGCACTATCA	NA	NA	NA	NA	NA	NA	NA	NA	85686694	85683995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024846	chr8	-	858	5	ISM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	-226	2298	-226	-2298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCCCGCTGGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	85692919	85686593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024847	chr8	-	1038	3	ISM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	12	9289	12	-8232	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGCGTGGATGAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	85696357	85692527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85692917_85694291_85694498_85695914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024848	chr8	+	1501	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	3	-4	3	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGGCTCTGACCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	85696242	85701467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024849	chr8	+	1427	6	NNC	ENSMUSG00000005161.16	novel	1500	6	NA	NA	70	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696309	85701463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_85696392_85696868_85696974_85697064_85697216_85697915_85698039_85698190_85698322_85700628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024850	chr8	+	1581	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109733.8	1590	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696404	85701463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85696638_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024851	chr8	+	706	4	FSM	ENSMUSG00000005161.16	ENST00000334482.9	698	4	-6	-2	-6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAAGTCTGTGTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	85696856	85700940	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85696974_85697064_85697219_85697915_85698039_85700628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024852	chr8	+	692	4	NNC	ENSMUSG00000005161.16	novel	698	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTAAGTCTGTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	85696865	85700938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_85696974_85697064_85697216_85697915_85698039_85700628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024853	chr8	+	1306	5	NNC	ENSMUSG00000005161.16	novel	1612	6	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696905	85701463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_85696974_85697069_85697219_85697915_85698039_85698190_85698322_85700628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024854	chr8	+	783	1	Genic_Genomic	ENSMUSG00000005161.16	novel	NA	NA	NA	NA	3816	3	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGGCTCTGACCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	85700683	85701466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_85700700_85701500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024855	chr8	-	657	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	1153	-1	1153	1	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTCTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	85704194	85703537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_85703500_85704200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024856	chr8	+	906	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTGGTTTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	85753448	85756916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85753864_85756167_85756246_85756503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024857	chr8	+	867	3	NNC	ENSMUSG00000041203.10	novel	902	3	NA	NA	-29	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTTGTGCTTGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	85753487	85756912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_85753864_85756167_85756250_85756503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024858	chr8	+	761	3	FSM	ENSMUSG00000041203.10	ENST00000588213.1	810	3	1	48	1	-48	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGCAGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	85753517	85756863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85753841_85756167_85756246_85756503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024859	chr8	+	725	2	FSM	ENSMUSG00000041203.10	ENST00000592273.5	757	2	0	32	0	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGAAGTAAAGAACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	85753518	85756883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85753864_85756503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024860	chr8	+	412	1	ISM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	3052	0	2985	0	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	85756503	85756915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85756500_85756900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024861	chr8	-	239	2	FSM	ENSMUSG00000095845.4	ENSMUST00000177563.2	328	2	49	40	49	-40	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGTGCTATCCTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	85794562	85794236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_85794344_85794430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024862	chr8	-	311	1	NIC	ENSMUSG00000005150.17	novel	1238	9	NA	NA	5401	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTCTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85801974	85801663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_85801700_85802000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024863	chr8	-	505	3	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	4614	28	4614	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAAAAGCCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	85802761	85801691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85801973_85802451_85802567_85802652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024864	chr8	-	358	4	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	1052	836	1052	-836	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCTGCTCTGAAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	85806323	85802499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85802567_85802652_85802762_85802845_85802914_85806209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024865	chr8	-	289	4	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	909	1053	909	-1053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATCCAGCCTGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	85806466	85802716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85802762_85802845_85802914_85806209_85806337_85806417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024866	chr8	-	350	4	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	520	1183	520	-1183	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTGTGGACAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	85806855	85802846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85802914_85806209_85806337_85806417_85806467_85806748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024867	chr8	-	279	3	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	312	4752	312	-4752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTAGGTCTGGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	85807063	85806415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85806467_85806748_85806855_85806941
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024868	chr8	-	458	3	ISM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	3	5085	3	-5085	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTACAAGCGAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	85807372	85806748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_85806855_85806941_85807063_85807141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024869	chr8	+	908	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	1	13	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGCTTGCACTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	85807369	85808955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024870	chr8	+	392	2	NNC	ENSMUSG00000059355.14	novel	922	4	NA	NA	20	-894	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTAAGGTGGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85807388	85807897	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_85807685_85807801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024871	chr8	+	467	4	FSM	ENSMUSG00000059355.14	ENST00000222190.9	465	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGCCCTGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85807640	85808791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_85807693_85807801_85807908_85808411_85808504_85808574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024872	chr8	+	454	4	NNC	ENSMUSG00000059355.14	novel	465	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGCCCTGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85807642	85808791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_85807693_85807801_85807891_85808405_85808504_85808574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024873	chr8	+	371	2	ISM	ENSMUSG00000059355.14	ENST00000222190.9	465	4	749	-42	749	42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTCCCTTTTACCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	85808391	85808833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_85808504_85808574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024874	chr8	+	402	1	Genic_Genomic	ENSMUSG00000059355.14	novel	NA	NA	NA	NA	926	2	mono-exon	FALSE	NA	NA	NA	NA	NA	385	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTCTCTTTTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	85808568	85808970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_85808600_85809000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024875	chr8	-	1208	1	Genic_Genomic	ENSMUSG00000110386.2	novel	NA	NA	NA	NA	5213	3	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGGGGTCTTTCAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	85853705	85852497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_85852500_85853700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024876	chr8	-	1886	2	FSM	ENSMUSG00000110386.2	ENSMUST00000209823.2	1885	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGGTCTTTCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	85858918	85852499	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_85853704_85858236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024877	chr8	+	1785	2	Antisense	novelGene_ENSMUSG00000110386.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACCCCTTAAACCATGC	NA	NA	NA	NA	NA	NA	NA	NA	85852574	85858892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_+_85853699_85858231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024878	chr8	+	1449	2	Antisense	novelGene_ENSMUSG00000110386.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCATGCCTTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85852818	85858804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_+_85853695_85858231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024879	chr8	+	496	3	ISM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	2	5110	2	-5110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATAATTTTATAATACT	NA	NA	NA	NA	NA	NA	NA	NA	86026421	86029590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_86026622_86027737_86027868_86029424
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024880	chr8	+	374	3	ISM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	1328	4620	1328	-4620	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGTTCTTGGGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	86027747	86030080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_86027868_86029424_86029589_86029990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024881	chr8	+	368	3	ISM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	3005	2749	3005	-2749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTCTGTGGTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86029424	86031951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_86029589_86029990_86030081_86031837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024882	chr8	+	299	3	ISM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	3577	1753	3577	-1753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGTACACTAGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86029996	86032947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_86030081_86031837_86031951_86032845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024883	chr8	+	489	3	ISM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	5417	213	5417	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCCTCTGAAGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	86031836	86034487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_86031951_86032845_86032948_86034214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024884	chr8	+	303	1	ISM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	8087	200	7985	7	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGAGTATTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	86034404	86034707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_86034400_86034700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024885	chr8	-	651	1	NIC	ENSMUSG00000036934.10	novel	1471	5	NA	NA	23335	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCATACCAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	86136038	86135387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_86135400_86136000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024886	chr8	-	821	3	ISM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	5933	535	5844	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATTGGTAATTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	86153529	86135922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86136520_86138741_86138925_86153488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024887	chr8	+	2295	3	ISM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	28762	0	28762	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	86247966	86254189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_86248124_86249884_86249998_86252164
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024888	chr8	+	2028	1	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	32957	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	86252161	86254189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_86252200_86254200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024889	chr8	-	1442	1	Genic_Genomic	ENSMUSG00000031701.7	novel	NA	NA	NA	NA	16271	1	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCAGCATTCTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	86265702	86264260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_86264300_86265700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024890	chr8	-	2016	5	ISM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	6646	364	6646	-364	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCCAAGTCATACCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	86275327	86264625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024891	chr8	-	1512	2	NNC	ENSMUSG00000031701.7	novel	2919	9	NA	NA	15157	-394	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGTGTTTTTAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	86266816	86264655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_86266030_86266678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024892	chr8	-	142	1	Genic_Genomic	ENSMUSG00000031703.9	novel	NA	NA	NA	NA	123210	8	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGTGGCAAGCAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	86444340	86444198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_86444200_86444300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024893	chr8	-	164	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	118182	1295	118182	-1295	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTGCTGAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	86449368	86445501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86445557_86449259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024894	chr8	-	165	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	115323	5091	115323	-5091	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGCAATAATCGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	86452227	86449297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86449378_86452142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024895	chr8	-	152	2	NNC	ENSMUSG00000031703.9	novel	3306	18	NA	NA	114658	-7969	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATTCCATATCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	86452892	86452175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_86452226_86452790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024896	chr8	-	179	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	108470	8613	108470	-8613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCCGTCCATCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	86459080	86452819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86452920_86459001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024897	chr8	-	124	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	104752	14795	104752	-14795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCCAGGTGGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	86462798	86459001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86459081_86462753
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024898	chr8	-	154	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	100611	20577	100611	-20577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTGAGGCAGATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	86466939	86464783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86464855_86466856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024899	chr8	-	205	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	76571	22712	76571	-22712	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGGCCTAAATCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	86490979	86466918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86467008_86490863
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024900	chr8	-	184	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	73868	46742	73868	-46742	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCCCACTCACACTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	86493682	86490948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86491037_86493586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024901	chr8	-	159	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	64706	49392	64706	-49392	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACAGGACAGGTATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	86502844	86493598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86493682_86502768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024902	chr8	-	109	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	60342	58599	60342	-58599	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTGGTTGGACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	86507208	86502805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86502851_86507144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024903	chr8	-	143	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	30302	62932	30302	-62932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTTCTCTGAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	86537248	86507138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86507207_86537173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024904	chr8	-	113	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	9698	92990	9698	-92990	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACTGAAGATTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	86557852	86537196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86537269_86557811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024905	chr8	+	309	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCATTTTTACTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	86550933	86551242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr8_+_86550900_86551200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024906	chr8	-	135	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	5841	113605	5841	-113605	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGAGTAGGAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	86561709	86557811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86557887_86561649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024907	chr8	-	175	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	4459	117443	4459	-117443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATGTGCTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	86563091	86561649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86561708_86562974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024908	chr8	-	151	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	1924	118833	1924	-118833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCCAAAATCATACCAACA	NA	NA	NA	NA	NA	NA	NA	NA	86565626	86563039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86563121_86565556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024909	chr8	-	171	2	ISM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	291	121349	291	-121349	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTATATAATATTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86567259	86565555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_86565630_86567162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024910	chr8	+	471	2	ISM	ENSMUSG00000047866.21	ENST00000535754.5	2429	14	-72	84922	5	-84922	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAATATCTGCAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	87350738	87358178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_87351045_87358013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024911	chr8	+	542	3	ISM	ENSMUSG00000047866.21	ENST00000535754.5	2429	14	17370	50630	-10016	-50630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCATTCATACGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	87368180	87392470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_87368429_87378803_87378946_87392318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024912	chr8	+	431	3	ISM	ENSMUSG00000047866.21	ENSMUST00000121673.8	1550	9	21373	3161	21373	-3001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCTGGCTTCGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	87399569	87440099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_87399698_87435560_87435704_87439939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024913	chr8	+	717	3	ISM	ENSMUSG00000047866.21	ENSMUST00000121673.8	1550	9	61749	59	61749	-58	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTTTAAGTAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	87439945	87443201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_87440148_87440530_87440722_87442877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024914	chr8	+	382	1	ISM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	92206	0	64681	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCTGGTCTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	87442877	87443259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_87442900_87443300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024915	chr8	-	947	2	FSM	ENSMUSG00000036840.6	ENST00000356721.3	2102	2	15	1140	15	-1066	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATTGCACAGCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	87455164	87451700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_87452485_87455001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024916	chr8	-	2204	1	Genic_Genomic	ENSMUSG00000031652.12	novel	NA	NA	NA	NA	41850	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGGAGGGTGGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	87569969	87567765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_87567800_87570000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024917	chr8	-	1631	3	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	23365	7988	23365	-7988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAAGGGCTGTTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	87588454	87578250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_87578350_87579786_87579918_87587053
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024918	chr8	-	1715	2	ISM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	18	17113	18	-17113	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTTCAACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	87611801	87587375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_87588739_87611449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024919	chr8	+	1605	5	ISM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	1041	-5	1003	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTTAGAGATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88846437	88861739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024920	chr8	+	1483	3	NNC	ENSMUSG00000036810.17	novel	1731	6	NA	NA	10886	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTAGTGGTTAGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	88856320	88861735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_88856433_88856974_88857030_88860419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024921	chr8	+	927	3	ISM	ENSMUSG00000031657.17	ENSMUST00000121949.2	3086	15	27137	428	27137	-428	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGCCAATAAATATCA	NA	NA	NA	NA	NA	NA	NA	NA	88891620	88898197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_88891660_88893623_88893801_88897486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024922	chr8	+	803	1	Genic_Genomic	ENSMUSG00000031657.17	novel	NA	NA	NA	NA	33370	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGTGTCATACAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	88897853	88898656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_88897900_88898700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024923	chr8	+	510	2	ISM	ENSMUSG00000031659.14	ENST00000566433.6	1850	13	-154	11423	-154	-11423	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCCCATGCGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	89033069	89035449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_89033399_89035268
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024924	chr8	+	380	1	ISM	ENSMUSG00000031659.14	ENSMUST00000168545.8	5937	28	46591	0	22987	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGTTTTGAATGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	89056210	89056590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_89056200_89056600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024925	chr8	-	769	2	ISM	ENSMUSG00000031660.14	ENST00000394689.2	2141	17	28948	-405	28948	405	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTTCTCTGTGTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	89059639	89058533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_89059172_89059508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024926	chr8	+	606	1	ISM	ENSMUSG00000036712.16	ENSMUST00000043526.15	8022	17	50822	3490	42628	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTATAAATATTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	89474477	89475083	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_89474500_89475100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024927	chr8	-	283	1	ISM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	15505	1140	13770	0	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGAGTGCTTCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	89755285	89755002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_89755000_89755300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024928	chr8	-	305	2	FSM	ENSMUSG00000031665.8	ENST00000566102.1	520	2	-2	217	-2	-217	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAGAACGGCGGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	89769057	89755219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_89755447_89768979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024929	chr8	+	1415	1	FSM	ENSMUSG00000109812.2	ENSMUST00000210665.2	1896	1	509	-28	509	28	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGAGCTGAGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	91603717	91605132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_91603700_91605100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024930	chr8	-	1180	1	FSM	ENSMUSG00000074171.3	ENSMUST00000209493.2	1885	1	706	-1	706	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTTTTCTATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	91634338	91633158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_91633200_91634300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024931	chr8	+	895	3	ISM	ENSMUSG00000056608.15	ENSMUST00000209423.2	9419	38	990	79505	990	-79505	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAACGAGTCTTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	91659961	91699786	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_91660491_91683010_91683343_91699752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024932	chr8	+	593	3	ISM	ENSMUSG00000056608.15	ENSMUST00000209423.2	9419	38	62114	55317	62114	-55317	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGCAGACACCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	91721085	91723974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_91721265_91723467_91723612_91723704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024933	chr8	+	608	4	ISM	ENSMUSG00000056608.15	ENSMUST00000209423.2	9419	38	66256	45996	66256	-45996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCACAATTGAATCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	91725227	91733295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_91725335_91728247_91728444_91732341_91732510_91733158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024934	chr8	+	617	4	ISM	ENSMUSG00000056608.15	ENSMUST00000209423.2	9419	38	74214	41252	74214	-41252	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCACTGAAGACGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	91733185	91738039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_91733339_91735347_91735459_91737239_91737437_91737883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024935	chr8	+	608	3	ISM	ENSMUSG00000056608.15	ENST00000615216.4	10493	37	98233	17948	98136	-16096	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGGAGTTTACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	91757107	91763195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_91757313_91761532_91761694_91762953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024936	chr8	+	614	4	ISM	ENSMUSG00000056608.15	ENST00000398510.7	11268	38	104042	12336	104026	-10534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCCTGACACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	91762997	91768757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_91763227_91764034_91764204_91767675_91767820_91768685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024937	chr8	+	568	1	ISM	ENSMUSG00000056608.15	ENSMUST00000048665.8	12008	40	225597	0	121605	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCCTCCGTACC	NA	NA	NA	NA	NA	NA	NA	NA	91780576	91781144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_91780600_91781100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024938	chr8	-	1168	1	ISM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	9330	1	5138	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATTTTTTTAACTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	91851295	91850127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91850100_91851300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024939	chr8	-	1115	2	ISM	ENSMUSG00000031667.17	ENST00000300245.8	1841	8	4920	60	4920	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATTAATCCAACTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	91851513	91850257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91851310_91851450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024940	chr8	-	1180	3	ISM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	8132	70	3910	-69	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTTAGGATTATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	91852523	91850266	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91851307_91851450_91851512_91852444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024941	chr8	-	587	1	Genic_Genomic	ENSMUSG00000033282.15	novel	NA	NA	NA	NA	93154	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCCAGAGGATGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	91943902	91943315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_91943300_91943900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024942	chr8	-	721	2	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	88921	3016	88921	-2675	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAATATATGAAAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	91948135	91946332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91946918_91947999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024943	chr8	-	648	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	49304	36173	49304	-35832	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCCCGTAAGTAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	91987752	91979489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91979567_91979703_91979895_91987372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024944	chr8	-	609	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	46765	36503	46765	-36162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCCACCAAGTGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	91990291	91979819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91979895_91987372_91987752_91990136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024945	chr8	-	993	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	39869	44055	39869	-43714	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATATGTTCTTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	91997187	91987371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91987752_91990136_91990289_91996726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024946	chr8	-	700	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	36698	46845	36698	-46504	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAGCCAGAGAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	92000358	91990161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91990289_91996726_91997180_92000238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024947	chr8	-	630	3	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	35957	53533	35957	-53192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACGCTGGAGCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	92001099	91996849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_91997180_92000238_92000357_92000917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024948	chr8	-	591	5	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	11056	64049	11056	-63708	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACTAAAGACTGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	92026000	92007365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024949	chr8	-	576	5	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	9546	69545	9546	-69204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCACAACTCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	92027510	92012861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024950	chr8	-	1797	1	FSM	ENSMUSG00000109956.2	ENSMUST00000209619.2	1789	1	0	-8	0	8	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGTTTTTATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	92034383	92032586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_92032600_92034400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024951	chr8	+	170	2	FSM	ENSMUSG00000055932.16	ENST00000640179.1	167	2	-2	-1	-2	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGACACCAGGATTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	92128430	92168378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_92128513_92168290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024952	chr8	+	98	1	NIC	ENSMUSG00000055932.16	novel	2086	9	NA	NA	39847	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGAGACACCAGGATTAACA	NA	NA	NA	NA	NA	NA	NA	NA	92168279	92168377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_92168300_92168400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024953	chr8	+	1491	2	ISM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	209246	793	120966	-793	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCACATCTTTCCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	92249398	92394274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_92249525_92392909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024954	chr8	+	1379	1	Genic_Genomic	ENSMUSG00000055932.16	novel	NA	NA	NA	NA	265258	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCCGTGCTTTTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	92393690	92395069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_92393700_92395100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024955	chr8	-	740	4	NNC	ENSMUSG00000031736.12	novel	773	4	NA	NA	29	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTTTGTGTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	93082430	93052660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_93053091_93073597_93073733_93077318_93077375_93082311
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024956	chr8	-	908	4	FSM	ENSMUSG00000031736.12	ENSMUST00000179421.9	773	4	-135	0	-135	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTTTGTGTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	93082594	93052660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_93053091_93073597_93073733_93077318_93077383_93082315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024957	chr8	-	230	1	ISM	ENSMUSG00000031736.12	ENSMUST00000179421.9	773	4	29565	4	29565	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACATGTTTGTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	93052894	93052664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_93052700_93052900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024958	chr8	-	302	2	ISM	ENSMUSG00000031736.12	ENSMUST00000034183.10	1238	7	29662	-1	29373	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACATGTTTGTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	93053086	93052664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_93052895_93053014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024959	chr8	-	266	3	ISM	ENSMUSG00000031736.12	ENSMUST00000034183.10	1238	7	366	20746	77	-20746	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTGCTTCTGTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	93082382	93073411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_93073547_93077318_93077383_93082315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024960	chr8	+	2069	3	NNC	ENSMUSG00000031737.12	novel	2071	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAACTGTAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93084811	93088143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_93085058_93086164_93086575_93086730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024961	chr8	+	2072	3	FSM	ENSMUSG00000031737.12	ENST00000320990.9	2071	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCAACTGTAACTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	93084811	93088144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_93085058_93086164_93086571_93086724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024962	chr8	+	2077	3	NNC	ENSMUSG00000031737.12	novel	2071	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAACTGTAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93084812	93088143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_93085058_93086164_93086575_93086721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024963	chr8	+	2044	3	NNC	ENSMUSG00000031737.12	novel	2071	3	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAACTGTAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93084835	93088143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_93085055_93086164_93086571_93086724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024964	chr8	+	2050	3	FSM	ENSMUSG00000031737.12	ENSMUST00000034184.12	2450	3	459	-59	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAACTGTAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93084835	93088143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_93085058_93086164_93086571_93086721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024965	chr8	+	2022	3	NNC	ENSMUSG00000031737.12	novel	2071	3	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAACTGTAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93084864	93088143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_93085058_93086164_93086575_93086724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024966	chr8	+	2000	3	NNC	ENSMUSG00000031737.12	novel	2071	3	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAACTGTAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	93084883	93088143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_93085058_93086164_93086575_93086727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024967	chr8	+	172	2	ISM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	243	25799	243	-25799	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTCTTCAAAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	93688094	93697914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93688150_93697797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024968	chr8	+	221	2	ISM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	9945	24246	9945	-24246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCACCTTGAACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	93697796	93699467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93697930_93699379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024969	chr8	+	184	2	ISM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	11719	15047	11719	-15047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATGTCTCTGTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	93699570	93708666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93699618_93708529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024970	chr8	+	273	2	ISM	ENSMUSG00000055368.15	ENST00000219833.13	2898	14	20730	12512	20681	-7930	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCCCAGGGTTCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	93708532	93715783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93708669_93715646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024971	chr8	+	216	2	ISM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	30116	4192	30116	-4192	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGGGGCTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	93717967	93719521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93718096_93719433
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024972	chr8	+	173	2	ISM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	31580	3011	31580	-3011	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACCGGAAACTCTTCACG	NA	NA	NA	NA	NA	NA	NA	NA	93719431	93720702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93719547_93720644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024973	chr8	+	216	2	ISM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	32793	2365	32793	-2365	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTTATGGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	93720644	93721348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93720774_93721261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024974	chr8	+	191	2	ISM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	34391	1030	34391	-1030	internal_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGCCCTCTCATCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	93722242	93722683	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93722345_93722594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024975	chr8	+	167	2	ISM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	34793	23	34793	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGACGTGAGACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	93722644	93723690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93722763_93723641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024976	chr8	+	182	2	ISM	ENSMUSG00000055368.15	ENST00000219833.13	2898	14	35837	887	35788	-887	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCACAGTCATCCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	93723639	93727408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_93723714_93727300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024977	chr8	+	165	1	Genic_Genomic	ENSMUSG00000055368.15	novel	NA	NA	NA	NA	40280	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTGTACAGTTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	93728131	93728296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_93728100_93728300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024978	chr8	+	721	3	ISM	ENSMUSG00000031748.17	ENSMUST00000138659.9	5526	8	-474	64397	1	-64397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCCAGTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	94537466	94622921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_94538082_94538278_94538322_94622858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024979	chr8	-	164	1	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	41091	0	41091	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTTCCATTTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	94698379	94698215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94698200_94698400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024980	chr8	-	193	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	38677	1641	38677	-1641	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCCGAAGGATGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	94700793	94699856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94699943_94700686
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024981	chr8	-	299	3	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	36702	2548	36702	-2548	internal_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTCTCCAAGTCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	94702768	94700763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94700872_94701363_94701448_94702661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024982	chr8	-	365	3	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	29399	4452	29399	-4452	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCAGGTAAAACTGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	94710071	94702667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94702797_94706945_94707050_94709939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024983	chr8	-	209	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	27895	11820	27895	-11820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGGAGAGAACCTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	94711575	94710035	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94710131_94711461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024984	chr8	-	245	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	27370	13246	27370	-13246	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGCTGTGTACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	94712100	94711461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94711573_94711966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024985	chr8	-	257	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	25333	13764	25333	-13764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGGAAGCCAGGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94714137	94711979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94712101_94714001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024986	chr8	-	176	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	25081	15786	25081	-15786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCCCCCACACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	94714389	94714001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94714135_94714346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024987	chr8	-	300	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	12387	27514	12387	-27514	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTAAGGTGCCAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	94727083	94725729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94725879_94726932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024988	chr8	-	166	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	7616	28810	7616	-28810	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGAGGAAGTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	94731854	94727025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94727098_94731760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024989	chr8	-	170	2	ISM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	548	33544	548	-33544	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATCAGATTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	94738922	94731759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94731854_94738846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024990	chr8	-	580	3	ISM	ENSMUSG00000031754.11	ENSMUST00000212981.2	1184	7	12388	-131	12388	131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTAGTGTTGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	94751246	94745944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94746333_94749402_94749518_94751169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024991	chr8	-	451	2	ISM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	0	16811	0	-12859	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTAAGTAGTGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	94763659	94758934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_94759131_94763404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024992	chr8	+	1333	1	FSM	ENSMUSG00000110499.2	ENSMUST00000211865.2	1915	1	608	-26	608	26	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCGTGGTGGTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	94776016	94777349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_94776000_94777300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024993	chr8	+	512	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCTGTGCATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	94899291	94900197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_94899504_94899754_94899821_94899963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024994	chr8	+	125	2	FSM	ENSMUSG00000031762.8	ENST00000569500.5	120	2	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCGGAGGGGTCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	94899472	94900057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_94899504_94899963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024995	chr8	+	237	1	Genic_Genomic	ENSMUSG00000031762.8	novel	NA	NA	NA	NA	474	2	mono-exon	FALSE	NA	NA	NA	NA	NA	460	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCTGTGCATTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	94899961	94900198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_94900000_94900200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024996	chr8	+	556	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	-6	-1	-6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTTTCTTGGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	94905703	94906956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_94905967_94906450_94906517_94906729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024997	chr8	+	634	2	FSM	ENSMUSG00000031765.9	ENSMUST00000212291.2	633	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94905837	94906955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_94905967_94906450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024998	chr8	+	785	1	FSM	ENSMUSG00000110679.2	ENSMUST00000212707.2	642	1	-42	-101	-42	101	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTGGTGAGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	94949578	94950363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_94949600_94950400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000024999	chr8	+	372	3	ISM	ENSMUSG00000032939.15	ENSMUST00000109547.2	2847	21	4	33733	4	-33515	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAACAACCGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	94954292	95007961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_94954484_94970281_94970400_95007898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025000	chr8	+	297	3	ISM	ENSMUSG00000032939.15	ENSMUST00000109547.2	2847	21	15993	28462	15993	-28244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAAAGTGAGGTAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	94970281	95013232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_94970400_95007898_95007962_95013116
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025001	chr8	+	508	4	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	276	22153	276	-22153	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCGAAGCTCTCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	94993563	95019323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_94993852_95007898_95007962_95013116_95013246_95019295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025002	chr8	+	436	4	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	19827	18259	17881	-18259	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAAGCTCGCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	95013114	95023217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95013246_95019295_95019371_95021648_95021739_95023077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025003	chr8	+	367	3	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	28358	13955	26412	-13955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCTGCAGGGCCAGACA	NA	NA	NA	NA	NA	NA	NA	NA	95021645	95027521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95021739_95023077_95023218_95027387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025004	chr8	+	426	3	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	29795	12623	27849	-12623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATGAGCACTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95023082	95028853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95023218_95027387_95027521_95028695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025005	chr8	+	458	3	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	34099	11083	32153	-11083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCACAGTGTCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	95027386	95030393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95027521_95028695_95028854_95030227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025006	chr8	+	510	4	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	35508	9417	33562	-9417	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATTTAGGTCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	95028795	95032059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95028854_95030227_95030394_95030787_95030882_95031867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025007	chr8	+	484	4	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	37502	8502	35556	-8502	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTCAGCTTTCTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	95030789	95032974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95030882_95031867_95032060_95032652_95032780_95032901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025008	chr8	+	297	4	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	39365	6956	37419	-6956	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTCGGTGGCAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	95032652	95034520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95032780_95032901_95032975_95033229_95033275_95034468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025009	chr8	+	358	4	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	39612	5824	37666	-5824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCGGGCCTGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	95032899	95035652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95032975_95033229_95033275_95034468_95034586_95035531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025010	chr8	+	569	5	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	41179	3187	39233	-3187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATCCCAGCATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	95034466	95038289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025011	chr8	+	525	3	ISM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	43639	-48	41693	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTTTCTTGTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	95036926	95041524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95037011_95038160_95038290_95041212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025012	chr8	+	283	1	NIC	ENSMUSG00000032939.15	novel	2758	22	NA	NA	45974	2	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTCCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95041207	95041490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_95041200_95041500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025013	chr8	+	507	2	ISM	ENSMUSG00000031766.5	ENST00000563236.6	3424	26	29242	42	29242	42	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGAGTCCCAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	95085081	95092884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95085152_95092447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025014	chr8	+	478	1	Genic_Genomic	ENSMUSG00000031766.5	novel	NA	NA	NA	NA	36610	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACCATCCCTATAACC	NA	NA	NA	NA	NA	NA	NA	NA	95092449	95092927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_95092400_95092900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025015	chr8	+	335	3	ISM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	121	5780	27	-5758	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCATCTTTTTATGATAA	NA	NA	NA	NA	NA	NA	NA	NA	95113186	95116225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95113367_95115983_95116062_95116148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025016	chr8	+	291	3	ISM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	2917	4523	2823	-4501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCATTAAGAACACGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	95115982	95117482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95116062_95116148_95116224_95117345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025017	chr8	+	192	3	ISM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	2874	4586	2837	-4583	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTCAAGTGATGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95115996	95117400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95116062_95116151_95116224_95117345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025018	chr8	+	295	3	ISM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	3060	3504	3023	-3501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCTACTGTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	95116182	95118482	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95116224_95117345_95117477_95118359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025019	chr8	+	422	3	ISM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	4267	2933	4267	-2933	internal_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCCGCAGCGACGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95117426	95119050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95117477_95118359_95118483_95118801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025020	chr8	+	1065	3	ISM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	5799	0	5799	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCAGAGACTCCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	95118958	95121983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95119153_95120423_95120530_95121218
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025021	chr8	-	224	2	Antisense	novelGene_ENSMUSG00000031770.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCATCTTCCTCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	95120525	95119024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_95119151_95120427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025022	chr8	+	790	1	Genic_Genomic	ENSMUSG00000031770.17	novel	NA	NA	NA	NA	8057	1	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAAGCTTGCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	95121216	95122006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_95121200_95122000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025023	chr8	+	375	2	Genic_Genomic	ENSMUSG00000094257.3	novel	579	1	NA	NA	3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAAAAGGCCACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	95131841	95132420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_95131909_95132112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025024	chr8	+	309	1	FSM	ENSMUSG00000094257.3	ENSMUST00000178107.3	579	1	273	-3	273	3	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAAAAGGCCACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	95132111	95132420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_95132100_95132400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025025	chr8	+	209	2	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	28	21953	28	-21953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGAGCTGTCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	95259722	95275065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95259822_95274955
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025026	chr8	+	331	2	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	15300	19069	15300	-19069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCAGTTCTCCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	95274994	95277949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95275174_95277797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025027	chr8	+	199	2	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	18159	18576	18159	-18576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCAGACCTCCCCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	95277853	95278442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95277978_95278367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025028	chr8	+	225	3	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	20321	15394	20321	-15394	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGACCTGGAGAAGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	95280015	95281624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95280090_95281302_95281387_95281557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025029	chr8	+	183	2	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	24347	12149	24347	-12149	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGACTACGACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	95284041	95284869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95284108_95284752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025030	chr8	+	186	3	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	27039	6358	27039	-6358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGTCAACCATGTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95286733	95290660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95286792_95289365_95289418_95290584
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025031	chr8	+	275	2	ISM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	35660	246	35660	-246	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTCGTGGGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	95295354	95296772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95295456_95296598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025032	chr8	+	174	1	ISM	ENSMUSG00000034361.11	ENSMUST00000048653.10	2342	16	37368	0	37291	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAAGCTCCTTCCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	95296985	95297159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95297000_95297200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025033	chr8	-	898	1	ISM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	26962	0	26962	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTTGTCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	95301663	95300765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95300800_95301700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025034	chr8	-	1041	3	ISM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	18983	875	18983	-875	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCACCTTCTCTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	95309642	95301640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95302486_95306027_95306093_95309511
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025035	chr8	+	955	2	FSM	ENSMUSG00000050079.11	ENSMUST00000121101.2	3092	2	-17	2154	-4	-2154	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACTCTTGTAGATAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	95328588	95349946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_95329059_95349461
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025036	chr8	+	560	2	ISM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	20763	31167	20763	3636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTAAATTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	95349456	95355736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95349964_95355683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025037	chr8	+	760	4	ISM	ENSMUSG00000050079.11	ENSMUST00000212729.2	2800	14	47842	597	47741	-597	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTTATTTTGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	95376434	95385784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95376484_95376822_95376976_95380854_95380960_95385331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025038	chr8	+	522	1	Genic_Genomic	ENSMUSG00000050079.11	novel	NA	NA	NA	NA	57690	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACAGCTCTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	95386383	95386905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_95386400_95386900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025039	chr8	+	2062	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	95393228	95401053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025040	chr8	+	370	1	ISM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	10049	0	9854	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGAACTTTTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	95508685	95509055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95508700_95509100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025041	chr8	-	1396	1	ISM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	17159	0	10715	0	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGGAGTGGTCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	95547827	95546431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95546400_95547800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025042	chr8	-	1633	4	ISM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	11553	-713	5202	713	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGCCAGAGGCAGCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	95553340	95548475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025043	chr8	-	484	1	ISM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	15299	2772	8855	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTTATGTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	95549687	95549203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95549200_95549700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025044	chr8	-	582	4	ISM	ENSMUSG00000031781.15	ENST00000569370.5	1167	6	3516	325	3516	-325	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCTCTTAGTGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	95555026	95549528	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95549836_95550280_95550360_95553262_95553337_95554904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025045	chr8	+	522	4	ISM	ENSMUSG00000031782.16	ENST00000567933.5	850	6	7	1110	7	-1110	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGGGACTGGCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	95565048	95579900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95565126_95569245_95569397_95571404_95571541_95579742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025046	chr8	+	1141	8	FSM	ENSMUSG00000031782.16	ENST00000567072.5	1180	8	40	-1	36	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAATTGCTCTCTAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	95565077	95581109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576876_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025047	chr8	+	518	4	ISM	ENSMUSG00000031782.16	ENST00000567933.5	850	6	6371	89	6371	-89	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCTGCCGTTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	95571412	95580921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95571541_95579742_95579899_95580232_95580287_95580741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025048	chr8	+	1340	7	ISM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	2792	0	2724	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGCTTTAATTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	95586869	95590870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025049	chr8	-	821	1	ISM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	6528	0	6528	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGTGTGTGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	95591276	95590455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95590500_95591300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025050	chr8	-	416	1	ISM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	6101	832	6101	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGACAGCAGGTAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	95591703	95591287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95591300_95591700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025051	chr8	-	450	2	ISM	ENSMUSG00000040631.9	ENST00000569548.5	1765	8	5827	213	5764	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGGCTTCCCTCTATCCC	NA	NA	NA	NA	NA	NA	NA	NA	95592040	95591500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95591876_95591965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025052	chr8	-	405	3	ISM	ENSMUSG00000040631.9	ENST00000569548.5	1765	8	4417	960	4354	-960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGTGGCTGTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95593450	95592247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95592388_95593084_95593275_95593375
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025053	chr8	-	441	2	ISM	ENSMUSG00000040631.9	ENST00000569548.5	1765	8	51	2728	-12	-2728	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCTGGGTCCTAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	95597816	95594015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95594128_95597487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025054	chr8	+	1016	3	ISM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	22199	158	22199	-158	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGGAAAAGGGAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	95766518	95771720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95766572_95766887_95767163_95771032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025055	chr8	+	739	1	Genic_Genomic	ENSMUSG00000060470.8	novel	NA	NA	NA	NA	26821	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTATCTGTTGGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	95771140	95771879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_95771100_95771900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025056	chr8	+	160	2	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	6177	10148	6177	-10148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCTGCTAAAAGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	95813990	95816691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95814047_95816587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025057	chr8	+	165	2	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	8828	6595	8828	-6595	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGCCACTCAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	95816641	95820244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95816706_95820143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025058	chr8	+	128	2	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	12726	5648	12726	-5648	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTCCTGACGTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95820539	95821191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95820584_95821107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025059	chr8	+	186	3	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	13578	4818	13578	-4818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGGACTCGCTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	95821391	95822021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95821464_95821800_95821873_95821979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025060	chr8	+	189	2	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	14487	4258	14487	-4258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCGGGCGGAGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	95822300	95822581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95822425_95822516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025061	chr8	+	143	2	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	14742	3805	14742	-3805	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGGGCAGTGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	95822555	95823034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95822648_95822983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025062	chr8	+	171	2	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	16238	2521	16238	-2521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGCTCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	95824051	95824318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95824147_95824242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025063	chr8	+	179	2	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	16432	2225	16432	-2225	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTGTGGTAGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	95824245	95824614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95824393_95824582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025064	chr8	+	173	2	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	17154	1481	17154	-1481	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCATGGCAGTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	95824967	95825358	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95825064_95825281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025065	chr8	+	156	1	ISM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	18870	0	18870	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCCCAAGCCTACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	95826683	95826839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_95826700_95826800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025066	chr8	-	214	1	NIC	ENSMUSG00000031788.15	novel	2898	16	NA	NA	9932	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCCAAGCATGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95827120	95826906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_95826900_95827100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025067	chr8	-	815	5	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	7972	-8	7630	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCACCCAAGCATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	95829422	95826909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95827119_95828036_95828146_95828639_95828775_95828974_95829205_95829290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025068	chr8	-	248	3	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	4234	3663	3892	-3651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTGGCAGTACAACATC	NA	NA	NA	NA	NA	NA	NA	NA	95833160	95830580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95830654_95832347_95832453_95833090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025069	chr8	-	809	5	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	740	7133	398	-7121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTCTGCAACTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	95836654	95834050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025070	chr8	-	4331	1	ISM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	4609	0	4609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTGCTTATGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	96053969	96049638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96049600_96054000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025071	chr8	+	901	6	FSM	ENSMUSG00000031792.16	ENST00000539737.6	821	6	10	-90	10	90	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACTGATCTAGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	96058930	96073351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96070584_96070691_96071916_96072001_96073154
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025072	chr8	+	218	2	ISM	ENSMUSG00000031792.16	ENST00000539737.6	821	6	131	13090	131	-13090	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAAAGTGCCTCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	96059051	96060171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_96059094_96059995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025073	chr8	+	228	2	ISM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	6361	4331	6352	-3457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCCTGACCTAAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	96065272	96069804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_96065446_96069749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025074	chr8	+	215	3	ISM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	10836	2166	10827	-1292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGGGACAGTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	96069747	96071969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_96069804_96070584_96070691_96071916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025075	chr8	+	220	1	Genic_Genomic	ENSMUSG00000031792.16	novel	NA	NA	NA	NA	14997	2	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGTCTTATTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	96073917	96074137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_96073900_96074100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025076	chr8	-	283	1	ISM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	14338	0	14313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96147159	96146876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96146900_96147200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025077	chr8	-	1258	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	37	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	96161460	96146876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025078	chr8	-	1738	1	Genic_Genomic	ENSMUSG00000046707.10	novel	NA	NA	NA	NA	40948	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGACTTTCATGGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	96174460	96172722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_96172700_96174500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025079	chr8	-	1837	2	ISM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	35410	554	35363	-554	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATACGCTCTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	96180045	96173277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96175047_96179977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025080	chr8	-	685	1	Genic_Genomic	ENSMUSG00000048400.14	novel	NA	NA	NA	NA	15446	2	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTGCCCTTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	96286379	96285694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_96285700_96286400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025081	chr8	-	1242	4	ISM	ENSMUSG00000048400.14	ENSMUST00000052690.13	1438	6	4257	27	3999	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCTCCTCCCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	96297826	96285787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96286451_96290977_96291107_96292085_96292345_96297635
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025082	chr8	-	652	4	ISM	ENSMUSG00000048400.14	ENST00000219301.8	1812	7	1101	5280	-37	-5057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATTTAATCCAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	96301862	96290976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96291107_96292085_96292345_96297635_96297827_96301790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025083	chr8	-	697	4	ISM	ENSMUSG00000048400.14	ENST00000219301.8	1812	7	724	6460	-156	-6237	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGCAAAAAGCTACATAAG	NA	NA	NA	NA	NA	NA	NA	NA	96302239	96292156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96292345_96297635_96297827_96301790_96301860_96301990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025084	chr8	-	642	4	ISM	ENSMUSG00000048400.14	ENST00000219301.8	1812	7	29	11938	29	-11715	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCCCCCCACCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	96302934	96297634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96297827_96301790_96301860_96301990_96302239_96302801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025085	chr8	+	2111	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	16	392	16	-392	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAAGACTCTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	96360096	96371296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_96360412_96364437_96364672_96369734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025086	chr8	+	843	2	FSM	ENSMUSG00000031669.11	ENST00000328514.11	845	2	2	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACCTGCTGGGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	96360224	96370390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_96360412_96369734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025087	chr8	+	404	2	FSM	ENSMUSG00000031669.11	ENSMUST00000212434.2	654	2	153	97	112	-97	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGAGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	96360334	96364764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_96360412_96364437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025088	chr8	+	376	1	NIC	ENSMUSG00000031669.11	novel	2519	3	NA	NA	4265	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGAATACATACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	96364487	96364863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_96364500_96364900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025089	chr8	+	1968	1	Genic_Genomic	ENSMUSG00000031669.11	novel	NA	NA	NA	NA	9499	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTGTCACTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	96369721	96371689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_96369700_96371700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025090	chr8	+	1348	2	ISM	ENSMUSG00000036564.18	ENSMUST00000073139.14	2966	15	9288	633	9262	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGCCCCTTTCTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	96438952	96441114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_96438992_96439805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025091	chr8	+	1332	1	ISM	ENSMUSG00000036564.18	ENSMUST00000073139.14	2966	15	10751	0	10725	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCAGCGTCATGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96440415	96441747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_96440400_96441700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025092	chr8	+	472	1	FSM	ENSMUSG00000061104.6	ENSMUST00000074053.6	789	1	346	-29	346	29	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCACAAAGAATCAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	96552319	96552791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_96552300_96552800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025093	chr8	-	355	1	ISM	ENSMUSG00000036534.7	ENSMUST00000040481.4	3333	12	17265	0	17265	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	96562902	96562547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96562500_96562900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025094	chr8	-	413	3	ISM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	9716	5597	9716	-5597	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACACCCCGGGTGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	96570451	96568148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96568350_96568803_96568952_96570387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025095	chr8	-	397	2	ISM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	4961	10209	4961	-10209	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCACTCCCCGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	96575206	96572760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96572960_96575008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025096	chr8	-	431	2	ISM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	696	12456	696	-12456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGAGTGCGCGCGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	96579471	96575007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96575397_96579429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025097	chr8	-	1123	1	Genic_Genomic	ENSMUSG00000031672.9	novel	NA	NA	NA	NA	23073	1	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTGCTTTTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	96591883	96590760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_96590800_96591900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025098	chr8	-	1571	4	ISM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	17630	7	17411	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGCCACTGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	96597545	96590768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025099	chr8	-	1111	2	NIC	ENSMUSG00000031672.9	novel	2530	10	NA	NA	21471	-39	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTCTCTGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	96593485	96590801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_96591876_96593448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025100	chr8	-	1185	2	ISM	ENSMUSG00000031672.9	ENST00000245206.10	2310	10	21367	73	21367	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATCTGCTCTAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	96593589	96590835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_96591876_96593444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025101	chr8	+	1689	1	FSM	ENSMUSG00000071041.5	ENSMUST00000120826.2	1545	1	-71	-73	-71	73	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTAGTGCTAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100757118	100758807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_100757100_100758800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025102	chr8	+	627	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACACATTTTAAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	101832098	101832725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr8_+_101832100_101832700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025103	chr8	-	455	2	ISM	ENSMUSG00000110340.2	ENSMUST00000209501.2	489	3	196	-1	196	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAACTCAGATGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	104073970	104070508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_104070793_104073799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025104	chr8	-	286	1	Genic_Genomic	ENSMUSG00000110340.2	novel	NA	NA	NA	NA	3372	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAACTCAGATGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	104070794	104070508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_104070500_104070800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025105	chr8	+	1567	1	FSM	ENSMUSG00000109909.2	ENSMUST00000210429.2	1632	1	67	-2	67	2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGGTCCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	104879404	104880971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_104879400_104881000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025106	chr8	-	1045	1	Genic_Genomic	ENSMUSG00000035824.8	novel	NA	NA	NA	NA	15722	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATTCATTCATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	104954360	104953315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_104953300_104954400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025107	chr8	-	1330	5	ISM	ENSMUSG00000035824.8	ENST00000569718.6	466	6	2279	-928	2279	-627	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAAGTCATCTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	104967803	104953954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_104954984_104955844_104955926_104963403_104963478_104965375_104965466_104967747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025108	chr8	-	427	5	ISM	ENSMUSG00000035824.8	ENST00000417693.8	581	7	6603	0	6603	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGATCTACAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	104963479	104954882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025109	chr8	-	361	4	ISM	ENSMUSG00000035824.8	ENST00000417693.8	581	7	12192	0	12192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGATCTACAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	104957890	104954882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025110	chr8	-	468	6	ISM	ENSMUSG00000035824.8	ENST00000417693.8	581	7	14	960	14	-960	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCACTGTCCCTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	104970068	104955842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104970016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025111	chr8	+	1881	3	FSM	ENSMUSG00000054400.17	ENSMUST00000098464.6	1804	3	-50	-27	-2	27	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAACATGAGAAAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	104977511	104991597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_104977728_104983916_104984076_104990091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025112	chr8	+	333	3	ISM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	111	1924	28	-1920	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGCTCTAATACCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	104977603	104988155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_104977728_104983916_104984076_104988105
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025113	chr8	+	415	3	ISM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	6441	0	6358	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	104983933	104990079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_104984076_104988105_104988202_104989902
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025114	chr8	+	1617	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	105067224	105074304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025115	chr8	-	1389	1	ISM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	23979	0	23736	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGGTGACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	105145700	105144311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105144300_105145700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025116	chr8	-	627	4	ISM	ENSMUSG00000035770.9	ENST00000443351.6	1499	12	19181	-5	19174	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAGCTGGCCTTGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	105150262	105146967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025117	chr8	-	190	1	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	14623	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGCGCCTTTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	105154813	105154623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_105154600_105154800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025118	chr8	-	430	3	ISM	ENSMUSG00000035770.9	ENST00000440564.6	869	6	12232	26	12232	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCTCTTTATAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	105157204	105154649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105154814_105156046_105156141_105157032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025119	chr8	-	213	2	NNC	ENSMUSG00000035770.9	novel	869	6	NA	NA	13337	-28	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTTCTTCTCTTTATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	105156099	105154651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_105154814_105156048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025120	chr8	-	350	2	ISM	ENSMUSG00000035770.9	ENST00000440564.6	869	6	5262	2409	5262	-2409	internal_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTCCAGGGAATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	105164174	105157032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105157203_105163994
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025121	chr8	-	368	3	ISM	ENSMUSG00000035770.9	ENST00000440564.6	869	6	2	9416	2	-9416	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAAGATTCCACCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	105169434	105164039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105164226_105169105_105169180_105169326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025122	chr8	+	3039	1	ISM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	4537	0	4537	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTCCTTTAGTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	105322619	105325658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_105322600_105325700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025123	chr8	-	1254	4	ISM	ENSMUSG00000031880.8	ENSMUST00000034351.8	1577	5	465	0	465	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTGTTGAGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	105357494	105354701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105355361_105356152_105356358_105356457_105356532_105357178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025124	chr8	+	1165	1	ISM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	46151	0	45880	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	NA	NA	NA	NA	NA	NA	NA	NA	105943456	105944621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_105943500_105944600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025125	chr8	+	400	3	ISM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	85	18512	85	-18512	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTTTCAACCAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	105951861	105961173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_105952119_105957759_105957843_105961113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025126	chr8	-	572	1	FSM	ENSMUSG00000069920.11	ENSMUST00000136822.3	2516	1	1944	0	1942	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTCTCTTCTCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	105979841	105979269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_105979300_105979800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025127	chr8	+	329	1	Genic_Genomic	ENSMUSG00000031889.10	novel	NA	NA	NA	NA	27581	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTGTTGATTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	105979357	105979686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_105979400_105979700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025128	chr8	-	204	1	Genic_Genomic	ENSMUSG00000031887.14	novel	NA	NA	NA	NA	6121	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGCACGCCTTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	105985120	105984916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_105984900_105985100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025129	chr8	-	319	2	ISM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	4978	886	4978	-886	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCTACGAGTATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	105986263	105985803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105985928_105986068
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025130	chr8	-	336	2	ISM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	4739	1169	4739	-1169	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGGGCAGCTCGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	105986502	105986086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105986262_105986341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025131	chr8	-	286	2	ISM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	3927	1577	3927	-1577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCGCTGCGCACCGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	105987314	105986494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_105986620_105987153
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025132	chr8	+	980	2	ISM	ENSMUSG00000033313.12	ENSMUST00000036221.12	1901	3	2044	811	2044	-811	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTGGCACTGAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	105993323	105995147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_105993798_105994641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025133	chr8	+	728	1	ISM	ENSMUSG00000033313.12	ENSMUST00000036221.12	1901	3	3951	0	3951	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGATCTCGAGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	105995230	105995958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_105995200_105996000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025134	chr8	+	2540	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	394	242	394	-242	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATTCCCAAACCAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	106003165	106008329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025135	chr8	+	1899	1	Genic_Genomic	ENSMUSG00000014776.8	novel	NA	NA	NA	NA	3903	2	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCAAGAGCGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	106006674	106008573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_106006700_106008600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025136	chr8	+	777	2	FSM	ENSMUSG00000110611.2	ENSMUST00000212288.2	989	2	213	-1	213	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTCTGTCCTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	106016833	106017951	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106017195_106017535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025137	chr8	-	531	3	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	9804	0	9804	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGTCAGTAACTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106040196	106039408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106039578_106039676_106039895_106040052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025138	chr8	-	848	3	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	7807	268	7807	-268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTTGGTGGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	106042193	106039676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106039895_106040052_106040197_106041707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025139	chr8	-	587	2	ISM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	15	2794	15	214	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCCAGCTTTCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	106049985	106042202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106042701_106049896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025140	chr8	-	293	1	NIC	ENSMUSG00000041679.10	novel	1922	5	NA	NA	7292	1	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGGCCCAGCCTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	106042708	106042415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_106042400_106042700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025141	chr8	-	353	2	FSM	ENSMUSG00000041679.10	ENST00000485549.1	451	2	8	90	8	-90	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCGTCCTTCTTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	106049992	106042506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_106042764_106049896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025142	chr8	-	295	2	NNC	ENSMUSG00000041679.10	novel	451	2	NA	NA	8	-151	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTTACCACTTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	106049992	106042567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_106042767_106049896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025143	chr8	+	785	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	NA	NA	NA	NA	NA	NA	NA	NA	106052985	106055689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025144	chr8	+	577	1	ISM	ENSMUSG00000014856.13	ENSMUST00000098453.9	950	5	8248	0	8248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGTGTCTTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	106061274	106061851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106061300_106061900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025145	chr8	-	320	2	ISM	ENSMUSG00000051648.14	ENST00000304372.6	2925	15	20743	4367	20743	-4367	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACATTGGGGAGGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	106114514	106113806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106114010_106114397
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025146	chr8	+	999	5	ISM	ENSMUSG00000054320.17	ENST00000435835.3	1700	9	3832	11780	3832	-11780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAAGTATTGACTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	106158152	106178926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106158246_106170365_106170494_106172839_106172889_106176018_106176460_106178638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025147	chr8	+	909	4	NIC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	18517	-5555	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTAGGAAAGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106172837	106185151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_106172889_106176018_106176460_106178638_106178932_106185027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025148	chr8	+	976	4	NIC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	21697	-2940	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCAGGCCTGGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106176017	106187766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_106176460_106178638_106178932_106185027_106185152_106187649
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025149	chr8	+	854	3	NNC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	21697	-5555	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTAGGAAAGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106176017	106185151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_106176460_106178638_106178932_106185032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025150	chr8	+	809	4	NIC	ENSMUSG00000054320.17	novel	2082	11	NA	NA	24374	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGACTTTCTATTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	106178694	106190707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_106178932_106185027_106185152_106187649_106187765_106190374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025151	chr8	-	1121	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	7	-1	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGACTCAGTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	106198151	106194123	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025152	chr8	-	530	1	ISM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	3502	2	638	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGACTGACTCAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	106194656	106194126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106194100_106194700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025153	chr8	-	686	4	FSM	ENSMUSG00000014846.13	ENST00000393957.7	981	4	4	291	4	-103	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAGGGTCACATGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	106198020	106194417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025154	chr8	-	882	1	FSM	ENSMUSG00000110686.2	ENSMUST00000212546.2	880	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTTTTTATATGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106312832	106311950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_106312000_106312800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025155	chr8	+	363	3	ISM	ENSMUSG00000038604.10	ENST00000379312.7	4137	21	9151	7213	7	-7201	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAGTAATGATAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	106341035	106341650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106341158_106341260_106341426_106341574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025156	chr8	+	330	2	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	4061	3358	4061	-3344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGCTTCAGCTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	106345089	106345507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106345358_106345445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025157	chr8	+	461	3	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	6076	922	6076	-908	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGGCAGGATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	106347104	106347943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106347209_106347481_106347641_106347745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025158	chr8	+	322	2	ISM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	7172	200	7172	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTACCACTGGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	106348200	106348665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106348294_106348436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025159	chr8	+	301	1	ISM	ENSMUSG00000038604.10	ENST00000379312.7	4137	21	16678	0	7534	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGCACTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	106348562	106348863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106348600_106348900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025160	chr8	-	372	2	FSM	ENSMUSG00000098120.2	ENSMUST00000182863.2	375	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTTCTTCTTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	106363979	106350967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_106351108_106363747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025161	chr8	+	666	2	ISM	ENSMUSG00000005698.16	ENST00000645306.1	3599	11	22	18566	22	-18541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGACTATCAGCCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	106370188	106390975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106370265_106390385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025162	chr8	-	154	1	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCTAGTACTAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	106386945	106386791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr8_-_106386800_106386900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025163	chr8	+	737	2	ISM	ENSMUSG00000005698.16	ENST00000645306.1	3599	11	20440	17886	20440	-17861	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGCTGCATAGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	106390606	106391655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106391176_106391487
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025164	chr8	+	269	2	ISM	ENSMUSG00000005698.16	ENST00000645306.1	3599	11	21359	16115	21359	-16090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTAGTTCTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	106391525	106393426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106391659_106393290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025165	chr8	+	273	3	ISM	ENSMUSG00000005698.16	ENST00000645306.1	3599	11	23207	11518	23207	-11493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTCCCCATTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	106393373	106398023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106393425_106396862_106396984_106397922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025166	chr8	+	1913	5	ISM	ENSMUSG00000005698.16	ENST00000645306.1	3599	11	31333	223	31333	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGACTGATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	106401499	106409318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025167	chr8	+	1673	2	ISM	ENSMUSG00000005698.16	ENST00000644753.1	3614	11	36540	-4	36540	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106406706	106409554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106406892_106408066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025168	chr8	+	676	1	ISM	ENSMUSG00000005698.16	ENST00000646076.1	3963	12	45781	0	38708	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTCTGAAGACTCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	106408874	106409550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106408900_106409600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025169	chr8	-	438	1	Genic_Genomic	ENSMUSG00000038000.11	novel	NA	NA	NA	NA	4230	2	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTTATCCGGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	106423486	106423048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_106423000_106423500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025170	chr8	-	817	3	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	2120	1536	2120	-1536	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTCACCTAAGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	106425596	106424586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106424961_106425039_106425132_106425245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025171	chr8	-	619	4	ISM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	1200	2199	1200	-2199	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGAGGACTGTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	106426516	106425249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106425596_106426026_106426124_106426210_106426363_106426492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025172	chr8	+	1262	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212430.2	1261	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	106428280	106430126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106428436_106428805_106429029_106429242
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025173	chr8	+	1119	2	ISM	ENSMUSG00000005699.17	ENSMUST00000093195.7	1265	3	518	-2	516	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGGTCCTTCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	106428796	106430126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106429029_106429239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025174	chr8	-	230	1	ISM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	4015	37	4015	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAACTTCTCTGTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	106430550	106430320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106430300_106430600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025175	chr8	-	347	2	ISM	ENSMUSG00000013155.11	ENST00000602644.5	1087	6	3695	125	3682	-125	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGATCACCACGTGGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	106430883	106430445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106430654_106430744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025176	chr8	-	431	3	ISM	ENSMUSG00000013155.11	ENST00000602644.5	1087	6	1214	423	1201	-423	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTTGGGCAAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	106433364	106430743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106430882_106431266_106431393_106433197
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025177	chr8	-	374	2	ISM	ENSMUSG00000013155.11	ENST00000602644.5	1087	6	198	2876	185	-2876	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTCCCAGGGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	106434380	106433196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106433371_106434180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025178	chr8	-	315	2	ISM	ENSMUSG00000013155.11	ENST00000602644.5	1087	6	8	3855	-5	-3855	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCAGACGGGGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	106434570	106434175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106434376_106434455
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025179	chr8	+	840	3	FSM	ENSMUSG00000013158.7	ENST00000403458.9	841	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTAGCCACTGAGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	106435449	106436730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106435646_106435983_106436217_106436319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025180	chr8	+	654	2	ISM	ENSMUSG00000013158.7	ENST00000403458.9	841	3	525	0	525	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTAGCCACTGAGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	106435973	106436730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106436217_106436319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025181	chr8	-	1968	1	ISM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	42843	0	42809	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTTGAAAAAAGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	106442453	106440485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_106440500_106442500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025182	chr8	+	1828	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	-7	-2	-7	2	mono-exon	FALSE	NA	NA	NA	NA	NA	793	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTCGACTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106581756	106583584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106581800_106583600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025183	chr8	+	923	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACAGTTTAAATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106587236	106605962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025184	chr8	+	1124	5	FSM	ENSMUSG00000008450.9	ENST00000568396.2	1145	5	21	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTAATTAGTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	106587610	106605976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106587899_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025185	chr8	+	337	4	NIC	ENSMUSG00000008450.9	novel	349	4	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGCTGACCTCCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	106602214	106605541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_106602291_106602985_106603043_106603141_106603241_106605436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025186	chr8	+	528	1	NIC	ENSMUSG00000008450.9	novel	948	5	NA	NA	3234	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACAGTTTAAATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106605434	106605962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_106605400_106606000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025187	chr8	+	3253	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	3	-1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGGCTGCCATTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	106627075	106658411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_106627173_106639251_106640279_106656282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025188	chr8	-	978	1	FSM	ENSMUSG00000045538.7	ENSMUST00000058579.7	2262	1	1286	-2	1286	2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTCATGATTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106737228	106736250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_106736200_106737200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025189	chr8	+	380	3	ISM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	33289	5045	33289	-5045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGTACAGTGGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	106771427	106775406	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106771517_106772532_106772702_106775284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025190	chr8	+	344	1	Genic_Genomic	ENSMUSG00000031901.13	novel	NA	NA	NA	NA	41971	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCACCTGCTTCAACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	106780109	106780453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_106780100_106780500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025191	chr8	+	3083	2	ISM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	48683	349	48683	-349	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAAATGTTTGGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	106835009	106856819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106835762_106854488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025192	chr8	+	1000	3	ISM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	37888	-569	37888	-551	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTCTGTCTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	106976962	106978875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106977101_106977828_106977926_106978110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025193	chr8	+	801	1	ISM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	41058	0	39551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTGTCTTTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	106978625	106979426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_106978600_106979400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025194	chr8	+	1194	2	ISM	ENSMUSG00000031907.10	ENSMUST00000212874.2	2195	5	4115	720	4115	-720	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAGACTTCGGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	107146145	107151641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_107146243_107150544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025195	chr8	-	279	1	FSM	ENSMUSG00000060019.7	ENSMUST00000073722.7	342	1	157	-94	157	94	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTGGTGCACACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	107299825	107299546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_107299500_107299800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025196	chr8	-	614	1	ISM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	9117	0	8739	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTGTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	107611108	107610494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_107610500_107611100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025197	chr8	+	375	1	ISM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	83590	0	83589	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTGTCTCTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107745971	107746346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_107746000_107746300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025198	chr8	+	1163	4	ISM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	11390	-1	11390	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGAGTCGTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	107769243	107772388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_107769328_107769543_107769764_107771086_107771228_107771670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025199	chr8	-	641	1	ISM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	9760	0	9755	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	107773561	107772920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_107772900_107773600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025200	chr8	-	137	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	507	662	507	-662	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTTCATCGACAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	107774739	107773813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_107773904_107774692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025201	chr8	-	1396	3	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	3857	2224	3857	-2224	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGCCCGGCGCGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	107779459	107775150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_107775763_107776773_107776943_107778844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025202	chr8	-	1079	3	ISM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	100	6199	100	-6199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCAGAAAGCAGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	107783216	107779125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_107779673_107780653_107780862_107782892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025203	chr8	+	2332	4	ISM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	222	584	198	-584	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTGGCCTTAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	107783730	107786979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_107783812_107783904_107784044_107784678_107784820_107785008
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025204	chr8	+	1957	1	ISM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	2098	0	2074	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCGTATCAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	107785606	107787563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_107785600_107787600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025205	chr8	+	814	3	FSM	ENSMUSG00000031924.5	ENST00000515314.6	819	3	7	-2	7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCATTCATCATAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	107877350	107910739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_107877506_107896442_107896572_107910209
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025206	chr8	+	530	1	NIC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	32865	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCATTCATCATAAGG	NA	NA	NA	NA	NA	NA	NA	NA	107910208	107910738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_107910200_107910700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025207	chr8	+	167	1	ISM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	36665	0	36593	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGGTTGCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107913936	107914103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_107913900_107914100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025208	chr8	-	348	1	FSM	ENSMUSG00000057657.5	ENSMUST00000080443.8	456	1	181	-73	181	73	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACCTCATTAAACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	107989699	107989351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_107989400_107989700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025209	chr8	-	907	1	Genic_Genomic	ENSMUSG00000003849.9	novel	NA	NA	NA	NA	3882	3	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCGCATGCCTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	108115760	108114853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_108114900_108115800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025210	chr8	-	1252	4	ISM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	10431	-1	235	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGGCGCATGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	108119407	108114855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025211	chr8	-	1146	4	FSM	ENSMUSG00000003849.9	ENST00000379047.7	1144	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGACTGACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	108119644	108115020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_108115757_108118753_108118868_108119272_108119404_108119479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025212	chr8	-	1140	4	NNC	ENSMUSG00000003849.9	novel	1144	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGACTGACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	108119634	108115020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_108115757_108118749_108118868_108119272_108119404_108119479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025213	chr8	-	465	3	FSM	ENSMUSG00000003849.9	ENST00000439109.6	598	3	51	82	51	-82	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAACAAGTTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108119591	108115534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_108115757_108119272_108119404_108119479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025214	chr8	-	270	1	Genic_Genomic	ENSMUSG00000003848.15	novel	NA	NA	NA	NA	12294	3	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGTTTTATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	108139387	108139117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_108139100_108139400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025215	chr8	-	464	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	7956	476	7956	-476	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGCTTAAATCCCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	108143725	108139596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108139816_108142737_108142883_108143625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025216	chr8	-	336	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	6821	3697	6821	-3697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGACTATCAATGACGAT	NA	NA	NA	NA	NA	NA	NA	NA	108144860	108142817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108142883_108143625_108143724_108144687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025217	chr8	-	351	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	6602	4557	6602	-4557	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTCCGAGAGGCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	108145079	108143677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108143724_108144687_108144859_108144945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025218	chr8	-	286	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	6275	5656	6275	-5656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAGCAGATCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108145406	108144776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108144859_108144945_108145075_108145331
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025219	chr8	-	314	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	3447	5833	3447	-5833	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGGTAAGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108148234	108144953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108145075_108145331_108145404_108148113
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025220	chr8	-	339	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	176	6211	176	-6211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATCCTTTTAGAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	108151505	108145331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108145404_108148113_108148245_108151369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025221	chr8	-	355	3	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	2	8984	2	-8984	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTGGATTGTTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	108151679	108148104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108148245_108151369_108151503_108151597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025222	chr8	-	413	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	47	-11	32	11	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGCTTCTATGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	108166164	108165751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_108165800_108166200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025223	chr8	+	422	2	ISM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	11699	-21	11699	21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGCCCTTCTCTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108283342	108283866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_108283417_108283518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025224	chr8	+	422	1	ISM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	121809	0	13162	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTGTCAGTGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108284805	108285227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_108284800_108285200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025225	chr8	-	439	1	Genic_Genomic	ENSMUSG00000039067.6	novel	NA	NA	NA	NA	7588	2	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCCTAGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108307449	108307010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_108307000_108307400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025226	chr8	-	649	4	ISM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	3503	562	3444	152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAGAAGGAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	108311593	108307574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025227	chr8	-	457	5	ISM	ENSMUSG00000039067.6	ENST00000567958.5	651	7	1688	1287	1688	-1287	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGCGGAGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	108313349	108309013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025228	chr8	-	504	5	ISM	ENSMUSG00000039067.6	ENST00000567958.5	651	7	-58	3123	1	-3123	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTCCCACCGAAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	108315095	108310849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025229	chr8	-	354	1	ISM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	17492	5	14416	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATATTATTGCATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	110275001	110274647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110274600_110275000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025230	chr8	-	655	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	10609	140	10609	-140	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTACCCACGTAACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	110278808	110274787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025231	chr8	-	442	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	9234	4650	9234	-4650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCAGTGGAAGAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	110280183	110279297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110279378_110279721_110279877_110279976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025232	chr8	-	367	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	8536	5173	8536	-5173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGATGCTCATCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	110280881	110279820	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110279877_110279976_110280186_110280779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025233	chr8	-	300	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	8032	5461	8032	-5461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTGCTGCTGCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	110281385	110280108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110280186_110280779_110280893_110281275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025234	chr8	-	341	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	7754	6131	7754	-6131	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGCCCTGTGCTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	110281663	110280778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110280893_110281275_110281384_110281544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025235	chr8	-	443	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	6578	7101	6578	-7101	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCTTCAGTCACCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	110282839	110281748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110281863_110282271_110282413_110282651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025236	chr8	-	505	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	6239	7636	6239	-7636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCAGCAAGGTACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	110283178	110282283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110282413_110282651_110282838_110282988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025237	chr8	-	360	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	5797	8132	5797	-8132	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACGGATGGGATCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	110283620	110282779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110282838_110282988_110283176_110283505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025238	chr8	-	498	4	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	4085	8338	4085	-8338	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGCGTGAGGTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	110285332	110282985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110283176_110283505_110283644_110284829_110284943_110285275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025239	chr8	-	345	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	3703	10222	3703	-10222	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATAAAGCTATGACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	110285714	110284869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110284943_110285275_110285384_110285550
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025240	chr8	-	319	2	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	3091	10903	3091	-10903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCCTCTGTGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	110286326	110285550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110285713_110286169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025241	chr8	-	353	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	1374	12348	1374	-12348	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCACGTCTGTCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	110288043	110286995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110287089_110287199_110287348_110287931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025242	chr8	-	369	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	685	12588	685	-12588	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGTCATCGGCCGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	110288732	110287235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110287348_110287931_110288037_110288580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025243	chr8	-	518	3	ISM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	100	13301	100	-13301	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGACATCGGCCCAAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	110289317	110287948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110288037_110288580_110288769_110289075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025244	chr8	+	638	2	ISM	ENSMUSG00000031723.9	ENSMUST00000178445.2	830	4	2572	255	2572	-255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGAGTTCATGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	110298091	110299900	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_110298155_110299325
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025245	chr8	+	608	1	Genic_Genomic	ENSMUSG00000031723.9	novel	NA	NA	NA	NA	4557	1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTTGTCTGTCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	110300076	110300684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_110300100_110300700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025246	chr8	-	1661	4	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	15573	0	1823	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	110404319	110397956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025247	chr8	-	1318	1	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	6868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	110399274	110397956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_110398000_110399300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025248	chr8	+	1669	6	NNC	ENSMUSG00000031728.11	novel	1797	6	NA	NA	132	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCCCTGGCTCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	110432888	110451559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_110433052_110436042_110436160_110447826_110447980_110448385_110448491_110449518_110449686_110450595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025249	chr8	+	1470	5	NNC	ENSMUSG00000031728.11	novel	1466	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTGGCTCCCTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	110436040	110451562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_110436160_110444393_110444520_110447826_110447980_110448385_110448491_110450595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025250	chr8	+	418	3	NNC	ENSMUSG00000031728.11	novel	1507	5	NA	NA	11786	-1753	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTACAGCACCTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	110447826	110449685	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_110447980_110448392_110448491_110449518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025251	chr8	+	915	1	ISM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	18471	1	14608	1	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTCCCTTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	110450648	110451563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_110450600_110451600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025252	chr8	+	3439	1	ISM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	3059	0	3059	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGTGTTTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	110947679	110951118	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_110947700_110951100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025253	chr8	-	660	1	Genic_Genomic	ENSMUSG00000033732.11	novel	NA	NA	NA	NA	35882	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCCACTGTGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	111537526	111536866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_111536900_111537500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025254	chr8	+	149	2	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	4326	29597	4326	-29545	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAGACTGCTTTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	111577998	111578982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111578083_111578917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025255	chr8	+	144	2	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	33885	484	33885	-432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTCAGATGGCTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	111607557	111608095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111607609_111608002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025256	chr8	+	147	2	ISM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	34422	107	34422	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATCAAGAGGCTGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	111608094	111608472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111608132_111608362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025257	chr8	+	138	1	ISM	ENSMUSG00000031753.17	ENST00000674443.1	2402	18	34784	0	34769	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCAAAGGTCCAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	111608441	111608579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111608400_111608600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025258	chr8	+	1642	2	ISM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	49623	856	49623	-856	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCCAGTTTTTGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	111696176	111698256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111696296_111696733
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025259	chr8	+	1603	1	Genic_Genomic	ENSMUSG00000031749.13	novel	NA	NA	NA	NA	50971	15	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCCACAGGTAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	111697524	111699127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_111697500_111699100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025260	chr8	+	748	5	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	1347	11775	1347	-11775	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCAGTTCTCCCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	111768108	111770429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025261	chr8	+	405	4	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	3637	8534	3637	-8534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGCGGAGCAAGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	111770398	111773670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111770426_111771509_111771635_111772158_111772304_111773562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025262	chr8	+	773	5	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	4745	5667	4745	-5667	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCTCTCTCATGTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	111771506	111776537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025263	chr8	+	420	3	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	7868	5043	7868	-5043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAACTTGGCAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	111774629	111777161	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111774658_111776330_111776538_111776976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025264	chr8	+	1149	6	ISM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	12283	-1	12283	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTCATGCGCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	111779044	111782205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111779154_111779822_111779987_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025265	chr8	+	379	1	ISM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	21292	2092	15064	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	111781825	111782204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_111781800_111782200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025266	chr8	+	1328	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	-2	0	-2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGAGTCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	111782968	111784296	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_111783000_111784300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025267	chr8	-	173	1	NIC	ENSMUSG00000033633.16	novel	1973	12	NA	NA	11005	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACGCTGGGTAAGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	111796560	111796387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_111796400_111796600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025268	chr8	-	362	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	9247	29	9247	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGGTCTCAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	111798318	111796416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111796560_111797316_111797409_111798191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025269	chr8	+	217	2	Antisense	novelGene_ENSMUSG00000033633.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCAGGGTAGCCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	111797316	111798318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_+_111797411_111798195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025270	chr8	-	279	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	8815	1001	8815	-1001	internal_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCATCTGCTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	111798750	111797388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111797409_111798191_111798318_111798617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025271	chr8	-	334	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	7189	2229	7189	-2229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCTTGGTGGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	111800376	111798616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111798748_111799253_111799361_111800280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025272	chr8	-	241	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	5677	2934	5677	-2934	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACGGAGACTGCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	111801888	111799321	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111799361_111800280_111800374_111801779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025273	chr8	-	255	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	5395	3962	5395	-3962	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGCCAATTCCGGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	111802170	111800349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111800374_111801779_111801888_111802047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025274	chr8	-	241	3	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	4810	5479	4810	-5479	internal_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGAGCTGCCGAAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	111802755	111801866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111801888_111802047_111802170_111802657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025275	chr8	+	186	2	Antisense	novelGene_ENSMUSG00000033633.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGAGAACGCAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	111802079	111802755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_+_111802172_111802661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025276	chr8	-	266	2	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	2018	6270	2018	-6270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCCCTCATCATAGAC	NA	NA	NA	NA	NA	NA	NA	NA	111805547	111802657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111802756_111805379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025277	chr8	-	271	2	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	0	9058	0	-9058	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGCAGTACAGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	111807565	111805445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111805623_111807471
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025278	chr8	-	3072	1	Genic_Genomic	ENSMUSG00000003316.15	novel	NA	NA	NA	NA	101733	9	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTTTTCCACTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	111884115	111881043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_111881000_111884100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025279	chr8	-	3244	3	ISM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	98504	596	98504	-596	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTGATGGGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	111887344	111881648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_111884694_111886430_111886538_111887252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025280	chr8	+	1228	5	FSM	ENSMUSG00000033545.15	ENST00000567962.5	1228	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	112263434	112349705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349533
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025281	chr8	-	773	5	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	895	473	895	-473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCACAGGTTTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112355778	112354129	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112354211_112354730_112354859_112354941_112355071_112355152_112355427_112355617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025282	chr8	-	803	5	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	292	1331	292	-1331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACGGTTCCCAGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	112356381	112354987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112355071_112355152_112355427_112355617_112355778_112355912_112356055_112356237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025283	chr8	-	810	5	ISM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	7	1496	7	-1496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCAGGGGGGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	112356666	112355152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112355427_112355617_112355778_112355912_112356055_112356237_112356380_112356574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025284	chr8	+	581	2	ISM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	22622	657	22622	-657	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAACATCAGAGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	112392790	112396657	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_112392837_112396122
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025285	chr8	+	1062	1	Genic_Genomic	ENSMUSG00000055835.11	novel	NA	NA	NA	NA	26414	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTTTTTGGCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	112396582	112397644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_112396600_112397600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025286	chr8	-	728	1	NIC	ENSMUSG00000031955.11	novel	3142	7	NA	NA	9935	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGTGTACCGTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	112438029	112437301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_112437300_112438000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025287	chr8	-	1214	3	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	7383	0	7383	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAGGACCAGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	112440581	112437513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112438027_112439232_112439323_112439970
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025288	chr8	-	902	3	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	5579	2960	5579	-2960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAAAGCCGCAGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	112442385	112440473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112441069_112441863_112442032_112442246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025289	chr8	-	888	3	ISM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	62	4364	62	-4364	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACGGGGCTTGGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	112447902	112441877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112442032_112442246_112442409_112447330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025290	chr8	-	253	2	ISM	ENSMUSG00000031955.11	ENST00000418647.7	3260	8	54	31720	-6	-31508	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTTGCTGTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	112470447	112469021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112469148_112470320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025291	chr8	-	1177	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGTTGGTGAGAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	112580921	112495121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025292	chr8	-	135	1	NIC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	3261	1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCCTTTCACTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	112593130	112592995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_112593000_112593100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025293	chr8	-	235	2	FSM	ENSMUSG00000031953.3	ENST00000566980.1	235	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCCCTTTCACTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	112596391	112592996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_112593129_112596288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025294	chr8	-	1934	1	ISM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	19937	0	19937	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	112640576	112638642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112638600_112640600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025295	chr8	+	780	3	FSM	ENSMUSG00000031950.8	ENST00000563744.1	777	3	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	112667361	112679547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_112667485_112667791_112667848_112678946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025296	chr8	+	1087	3	ISM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	456	441	426	256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTCTTCTCAGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	112667790	112679803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_112667848_112669133_112669307_112678946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025297	chr8	+	917	1	Genic_Genomic	ENSMUSG00000031950.8	novel	NA	NA	NA	NA	11977	14	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTACACACTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	112679341	112680258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_112679300_112680300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025298	chr8	-	270	1	Genic_Genomic	ENSMUSG00000031948.15	novel	NA	NA	NA	NA	17558	4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTTACTTTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	112720340	112720070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_112720100_112720300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025299	chr8	-	536	3	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	14679	0	14679	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112723219	112720074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112720339_112721495_112721640_112723091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025300	chr8	-	359	3	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	13604	1420	13604	-1420	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACGCAGGGGCCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	112724294	112721494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112721640_112723091_112723219_112724207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025301	chr8	-	425	3	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	12302	4847	12302	-4847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGACCATACTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	112725596	112724921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112725008_112725153_112725328_112725431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025302	chr8	-	459	3	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	11075	5079	11075	-5079	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACATACAATACTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	112726823	112725153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112725328_112725431_112725595_112726701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025303	chr8	-	529	4	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	8660	6627	8660	-6627	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCAATAGCCACACACC	NA	NA	NA	NA	NA	NA	NA	NA	112729238	112726701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112726822_112728115_112728242_112728332_112728520_112729142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025304	chr8	-	402	3	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	7826	8303	7826	-8303	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCACATGCTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	112730072	112728377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112728520_112729142_112729237_112729906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025305	chr8	-	418	3	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	5478	9067	5478	-9067	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACACAGAAATACACAATTA	NA	NA	NA	NA	NA	NA	NA	NA	112732420	112729141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112729237_112729906_112730073_112732263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025306	chr8	-	411	3	ISM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	26	9832	26	-9832	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGCAGGTCCCTGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	112737929	112729906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_112730073_112732263_112732421_112737841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025307	chr8	+	1089	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	366	2105	366	-2105	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATAGGCAAATCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	112738395	112745055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_112738775_112741968_112742094_112744470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025308	chr8	+	911	1	Genic_Genomic	ENSMUSG00000033430.11	novel	NA	NA	NA	NA	8222	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTGTCTTAAATAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	112746251	112747162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_112746300_112747200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025309	chr8	+	604	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	135820	124244	135820	-124244	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGACATCACAGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	113478849	113484270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_113479024_113479564_113479750_113484025
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025310	chr8	+	588	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	140994	108142	140994	-108142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAGTCCCGTATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	113484023	113500372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_113484288_113494091_113494242_113500198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025311	chr8	+	485	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	186651	66274	186651	-66274	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGTCCCAATGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	113529680	113542240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_113529880_113537216_113537374_113542111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025312	chr8	+	508	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	199081	39157	199081	-39157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTGTTGGTAAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	113542110	113569357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_113542240_113568336_113568508_113569149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025313	chr8	+	489	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	225448	27652	225448	-27652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGTGAGCCAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	113568477	113580862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_113568508_113569149_113569369_113580622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025314	chr8	+	570	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	237622	23590	237622	-23590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAGATTATCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	113580651	113584924	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_113580863_113582924_113583150_113584790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025315	chr8	+	488	3	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	259013	0	259013	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAATGATCCTCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	113602042	113608514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_113602265_113602587_113602660_113608320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025316	chr8	+	291	2	ISM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	624	5834	376	-5834	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTACTCACGGTACGGTA	NA	NA	NA	NA	NA	NA	NA	NA	114362842	114364604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_114362902_114364372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025317	chr8	+	283	2	ISM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	3545	4060	3297	-4060	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGCCTGCATGCTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	114365763	114366378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_114365987_114366318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025318	chr8	+	186	2	ISM	ENSMUSG00000004637.16	ENSMUST00000109107.3	2383	5	36	30017	36	-30017	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAACGGGTCGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	115166477	115171252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_115166619_115171207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025319	chr8	-	642	1	NIC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	157609	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTAAGCTCTTGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	117302027	117301385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_117301400_117302000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025320	chr8	-	1166	4	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	143477	0	143477	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGGTAAGCTCTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	117316159	117301386	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025321	chr8	-	662	4	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	137804	4518	137804	-4518	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCTGTGTCATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	117321832	117305904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_117306051_117309745_117309957_117315988_117316162_117321700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025322	chr8	-	949	3	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	108529	14633	108529	-14633	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGCACTCGAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	117351107	117316019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_117316162_117321700_117321919_117350518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025323	chr8	-	687	2	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	1	49131	1	-49131	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTCTTTCTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	117459635	117350517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_117351106_117459536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025324	chr8	-	1461	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTGCAGAGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117648196	117615423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025325	chr8	-	507	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	18	-2	18	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGACAGCGTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	117648160	117616269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_117616599_117637866_117637974_117648089
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025326	chr8	+	421	4	ISM	ENSMUSG00000031756.6	ENST00000305850.10	794	8	508	4660	508	3142	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTCTGAGTCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	117658329	117662994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_117658410_117660025_117660203_117661433_117661536_117662932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025327	chr8	+	582	5	ISM	ENSMUSG00000031756.6	ENST00000305850.10	794	8	2204	344	2204	-344	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGTCAGTTTATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	117660025	117667310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_117660203_117661433_117661536_117662932_117662995_117663900_117664014_117667182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025328	chr8	+	422	5	ISM	ENSMUSG00000031756.6	ENST00000305850.10	794	8	3675	0	3675	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATATGGCTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117661496	117667654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_117661536_117662932_117662995_117663900_117664014_117667182_117667310_117667573
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025329	chr8	+	656	3	ISM	ENSMUSG00000047388.11	ENST00000564241.5	2482	4	18	3670	18	-3670	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCGGTACTGTGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	117679628	117683337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_117679739_117681452_117681653_117682991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025330	chr8	+	514	2	ISM	ENSMUSG00000047388.11	ENST00000564241.5	2482	4	5021	0	5021	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTTTTTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	117684631	117687007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_117684957_117686818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025331	chr8	-	952	3	ISM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	6163	159	6163	-159	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGATTTTTATTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	117714113	117708707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_117709466_117710546_117710679_117714051
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025332	chr8	+	1183	5	FSM	ENSMUSG00000031844.9	ENST00000199936.9	1185	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGCCTACTGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	118428605	118485588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_118429003_118461232_118461446_118469070_118469261_118479924_118480063_118485343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025333	chr8	-	974	4	ISM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	2790	-1	2790	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGAAGTAATTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	118525892	118518382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025334	chr8	+	583	3	ISM	ENSMUSG00000031841.20	ENST00000268613.14	2323	12	523835	81296	523835	-81296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCTCCTCGGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	119925591	119969185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_119925735_119963522_119963706_119968928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025335	chr8	+	838	3	ISM	ENSMUSG00000031841.20	ENSMUST00000117160.2	3785	14	1028931	983	637646	196	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCTGCTCAGTCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	120039402	120050677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120039475_120040711_120040934_120050133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025336	chr8	+	601	1	ISM	ENSMUSG00000031841.20	ENST00000567109.6	3546	12	649307	40	649307	4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGCAGTAGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	120051063	120051664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120051100_120051700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025337	chr8	+	187	2	ISM	ENSMUSG00000031839.8	ENSMUST00000212468.2	638	5	-21	3341	13	-3341	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCCTTTTGATTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	120071239	120071741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120071360_120071674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025338	chr8	+	236	2	ISM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	1125	772	1091	-193	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATAGCCTAGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	120072351	120074889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120072473_120074774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025339	chr8	+	156	1	ISM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	4279	0	4245	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAGAATGGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	120075505	120075661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120075500_120075700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025340	chr8	+	351	2	ISM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	358	9506	358	-9506	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGGCAGCCTTCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120121974	120128335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120122210_120128219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025341	chr8	+	272	2	ISM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	6602	8511	6602	-8511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTACGCATGGTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120128218	120129330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120128333_120129172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025342	chr8	-	267	2	Antisense	novelGene_ENSMUSG00000074064.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACACCAACAGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	120136841	120134292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_120134439_120136720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025343	chr8	+	255	1	ISM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	15970	0	15970	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTGTGTACTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	120137586	120137841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120137600_120137800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025344	chr8	+	1668	4	ISM	ENSMUSG00000074063.11	ENSMUST00000152420.8	2005	6	5368	0	5324	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTGAGGAGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120169224	120172995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120169309_120169654_120169847_120169930_120170023_120171695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025345	chr8	+	333	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	2	17371	2	-17371	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTGGGTAGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	120176723	120181199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120176846_120178820_120178930_120181097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025346	chr8	+	294	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	2149	9134	2149	-9134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCATGGGGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	120178870	120189436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120178930_120181097_120181196_120189299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025347	chr8	+	157	2	NNC	ENSMUSG00000031837.15	novel	1004	10	NA	NA	4372	-9220	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGACAGCCAATCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	120181093	120189350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_120181200_120189299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025348	chr8	+	258	2	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	12576	6811	12576	-6811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGAGCACCGGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120189297	120191759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120189437_120191640
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025349	chr8	+	259	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	14913	4187	14913	-4187	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACCCTTTCTACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	120191634	120194383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120191760_120191891_120191972_120194329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025350	chr8	+	249	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	15169	3449	15169	-3449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAAGCGCTTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	120191890	120195121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120191972_120194329_120194384_120195007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025351	chr8	+	237	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	17617	845	17617	-845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGCAGCCGGGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	120194338	120197725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120194384_120195007_120195121_120197646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025352	chr8	+	211	3	ISM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	18358	0	18358	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGGGCCGGGGACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	120195079	120198570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120195121_120197646_120197725_120198478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025353	chr8	+	94	1	NIC	ENSMUSG00000031837.15	novel	1976	13	NA	NA	21755	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGGGCCGGGGACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	120198476	120198570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_120198500_120198600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025354	chr8	-	1912	1	Genic_Genomic	ENSMUSG00000034189.6	novel	NA	NA	NA	NA	6096	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCCGCCACCAGAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	120290638	120288726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_120288700_120290600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025355	chr8	-	2400	3	ISM	ENSMUSG00000034189.6	ENSMUST00000212517.2	2215	5	3618	-485	3618	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTGTCCGCTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	120293116	120289053	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_120290877_120292382_120292611_120292767
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025356	chr8	-	571	1	ISM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	17770	0	17770	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGGTAGCAGGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	120487385	120486814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_120486800_120487400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025357	chr8	-	1572	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	29	-5	7	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGGGTTGTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	120567254	120535955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025358	chr8	+	1011	4	NNC	ENSMUSG00000031826.21	novel	2662	15	NA	NA	4288	-14950	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCGAAAGTGCGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	120641859	120668649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_120641946_120658587_120658657_120663269_120663328_120667851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025359	chr8	+	1075	4	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	30480	8396	30480	-8396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGCCAAGGTGAGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	120668051	120675203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120668878_120673813_120673906_120674439_120674550_120675156
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025360	chr8	+	206	2	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	37844	6402	37844	-6402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTCTTCTGGGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	120675415	120677197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120675522_120677097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025361	chr8	+	279	2	ISM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	45363	67	45363	-67	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGCTGCTTCCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	120682934	120683532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120683003_120683321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025362	chr8	+	253	1	ISM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	46943	0	46470	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTGTGTTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	120684041	120684294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_120684000_120684300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025363	chr8	-	992	1	Genic_Genomic	ENSMUSG00000031823.15	novel	NA	NA	NA	NA	19602	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGACCTCCTTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	120808619	120807627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_120807600_120808600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025364	chr8	-	1172	3	ISM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	16557	868	16557	-868	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCCAGCGCTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	120811664	120808496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_120809456_120809968_120810100_120811582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025365	chr8	-	2075	1	Genic_Genomic	ENSMUSG00000097960.2	novel	NA	NA	NA	NA	21736	14	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCACACACGCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	120933233	120931158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_120931200_120933200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025366	chr8	-	1346	1	Genic_Genomic	ENSMUSG00000031821.12	novel	NA	NA	NA	NA	9327	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTCAGCCTAGTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	121306716	121305370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_121305400_121306700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025367	chr8	-	1463	2	ISM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	7096	1843	7096	-1843	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTACTGTGGTCTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	121308947	121307214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121308551_121308820
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025368	chr8	-	575	2	ISM	ENSMUSG00000043687.17	ENSMUST00000123927.9	844	4	23153	0	23153	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCGGGTCCTGGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121338078	121335340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121335770_121337932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025369	chr8	-	248	1	NIC	ENSMUSG00000043687.17	novel	844	4	NA	NA	25460	16	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCGGCTTGGTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	121335771	121335523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_121335500_121335800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025370	chr8	-	914	1	Genic_Genomic	ENSMUSG00000031819.14	novel	NA	NA	NA	NA	13261	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTCTCTGTGTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	121381565	121380651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_121380700_121381600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025371	chr8	-	963	2	ISM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	9498	3468	9464	451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATGCTCTACAGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	121385362	121384120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121384988_121385266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025372	chr8	-	646	2	FSM	ENSMUSG00000031819.14	ENSMUST00000181950.2	747	2	102	-1	102	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTACACGGTGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	121394724	121384570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_121384988_121394495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025373	chr8	+	747	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGGTTCATTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121394960	121400948	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025374	chr8	+	740	5	NNC	ENSMUSG00000031818.13	novel	745	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121394963	121400946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_121395095_121396047_121396122_121399463_121399630_121399959_121400092_121400709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025375	chr8	+	762	5	FSM	ENSMUSG00000031818.13	ENSMUST00000181586.8	765	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121394963	121400946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_121395115_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025376	chr8	+	709	5	NNC	ENSMUSG00000031818.13	novel	745	5	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121394992	121400946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_121395095_121396047_121396122_121399467_121399632_121399959_121400092_121400709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025377	chr8	+	689	5	NNC	ENSMUSG00000031818.13	novel	745	5	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121395009	121400946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_121395088_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025378	chr8	+	588	5	FSM	ENSMUSG00000031818.13	ENST00000561569.5	600	5	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCTGCCTGCCGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	121395040	121400849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_121395095_121396027_121396122_121399463_121399632_121399959_121400092_121400709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025379	chr8	-	234	1	ISM	ENSMUSG00000031816.16	ENSMUST00000047282.12	8312	8	9385	7072	8042	5	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAGCAGAGGAGTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	121825672	121825438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121825400_121825700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025380	chr8	-	426	3	ISM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	5436	264	5436	-264	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGGCGGACACCCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	121828278	121825707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121825892_121827857_121827984_121828162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025381	chr8	-	265	3	ISM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	3968	2482	3968	-2482	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCCCACCAGGGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	121829746	121827925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121827984_121828162_121828276_121829652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025382	chr8	-	275	3	ISM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	2466	2766	2466	-2766	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCCACAAGGGGACACCG	NA	NA	NA	NA	NA	NA	NA	NA	121831248	121828209	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121828276_121829652_121829744_121831130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025383	chr8	-	269	3	ISM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	1286	4261	1286	-4261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTCTTGTGGATCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	121832428	121829704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121829744_121831130_121831245_121832312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025384	chr8	-	346	3	ISM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	1	5674	1	-5674	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACCTCAGGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	121833713	121831117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_121831245_121832312_121832427_121833608
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025385	chr8	+	1604	1	FSM	ENSMUSG00000097084.2	ENSMUST00000181609.2	2705	1	1109	-8	1109	8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAACAAATGACCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	121855787	121857391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_121855800_121857400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025386	chr8	-	258	1	ISM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	29109	0	29109	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACTTGTTTCTCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	122276436	122276178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122276200_122276400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025387	chr8	-	352	2	ISM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	23447	4814	23447	-4814	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGCCACCTGCTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	122282098	122280992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122281191_122281944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025388	chr8	+	2537	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	1	-6	1	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACAATTTGTCCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	122317100	122325505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025389	chr8	+	2139	4	NNC	ENSMUSG00000031812.17	novel	2532	4	NA	NA	-8	-275	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAGCCACGAATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	122317207	122325224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_122317304_122320228_122320285_122322734_122322832_122323334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025390	chr8	+	2178	1	Genic_Genomic	ENSMUSG00000031812.17	novel	NA	NA	NA	NA	5881	10	mono-exon	FALSE	NA	NA	NA	NA	NA	1190	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGTCCTTTTTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	122323331	122325509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_122323300_122325500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025391	chr8	+	464	1	FSM	ENSMUSG00000098221.2	ENSMUST00000182551.2	464	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGCCTTGTTTAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	122380792	122381256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_122380800_122381300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025392	chr8	-	333	3	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	28263	-1	28262	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCAGATGAAGAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	122527957	122523723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122523768_122526186_122526396_122527877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025393	chr8	-	439	3	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	24373	2470	24372	-2470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAAGGTAGCCTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	122531847	122526194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122526396_122527877_122527954_122531685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025394	chr8	-	331	3	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	22882	4152	22881	-4152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTGTGCCTTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	122533338	122527876	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122527954_122531685_122531846_122533244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025395	chr8	-	380	3	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	15635	7974	15634	-7974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTCAAAGCAGGTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	122540585	122531698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122531846_122533244_122533338_122540445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025396	chr8	-	330	3	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	9261	9519	9260	-9519	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTACAGCAGATCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	122546959	122533243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122533338_122540445_122540583_122546860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025397	chr8	-	316	3	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	8122	16721	8121	-16721	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGATTCTGGACATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	122548098	122540445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122540583_122546860_122546960_122548018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025398	chr8	-	1745	1	ISM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	24800	0	24800	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122609633	122607888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122607900_122609600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025399	chr8	-	1883	2	ISM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	23927	240	23927	-240	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCCTGAAAGACACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	122610506	122608128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_122609835_122610329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025400	chr8	+	358	3	ISM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	-77	49965	11	-49663	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGACCCCTCTATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	122677241	122702711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_122677388_122701165_122701305_122702638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025401	chr8	+	344	2	ISM	ENSMUSG00000025316.17	ENSMUST00000173254.8	1521	12	49503	-124	49503	124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGGTCCTGGCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	122750737	122752498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_122750886_122752302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025402	chr8	+	310	1	ISM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	75325	3080	51373	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGCTCAGTGTTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	122752607	122752917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_122752600_122752900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025403	chr8	-	579	1	Genic_Genomic	ENSMUSG00000006517.6	novel	NA	NA	NA	NA	9244	1	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCGTGTGGGCTGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	123160917	123160338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_123160300_123160900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025404	chr8	-	796	3	ISM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	6831	6	6831	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGCCCGTGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	123163330	123160345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123160915_123161542_123161652_123163212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025405	chr8	-	1535	1	Genic_Genomic	ENSMUSG00000110656.2	novel	NA	NA	NA	NA	4487	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGATGAGTAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	123173539	123172004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_123172000_123173500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025406	chr8	-	778	1	Genic_Genomic	ENSMUSG00000014470.5	novel	NA	NA	NA	NA	9141	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGAGCCTTGGTCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123193662	123192884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_123192900_123193700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025407	chr8	-	912	3	ISM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	7772	337	7772	-337	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATCTCTGAGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	123195031	123193222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123193974_123194700_123194809_123194978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025408	chr8	+	527	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	14	3680	14	-3680	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGGTGCCCACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	123294767	123296187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123295011_123295825_123295985_123296062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025409	chr8	+	482	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	1071	3055	1071	-3055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGGTGTTCAGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	123295824	123296812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123295985_123296062_123296215_123296642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025410	chr8	+	388	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	1888	2645	1888	-2645	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCGGCAAGTCTTCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	123296641	123297222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123296841_123296932_123297079_123297179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025411	chr8	+	371	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	2214	1726	2214	-1726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGCCCGGAGCTTGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	123296967	123298141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123297079_123297179_123297278_123297979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025412	chr8	+	484	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	3224	1052	3224	-1052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTATGGAGGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	123297977	123298815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123298169_123298434_123298588_123298675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025413	chr8	+	516	3	ISM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	3713	442	3713	-442	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGACGCACTTACGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	123298466	123299425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123298588_123298675_123298878_123299232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025414	chr8	+	372	1	Genic_Genomic	ENSMUSG00000006585.4	novel	NA	NA	NA	NA	4744	2	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAACCTGTCACCGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	123299497	123299869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_123299500_123299900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025415	chr8	-	858	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCTCCTCAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	123303631	123301372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_123301767_123301875_123301955_123302140_123302275_123303249_123303361_123303491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025416	chr8	-	363	1	ISM	ENSMUSG00000006589.9	ENSMUST00000213062.2	560	3	492	0	492	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123301736	123301373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123301400_123301700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025417	chr8	-	726	4	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123303369	123301373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_123301767_123301875_123301955_123302140_123302275_123303249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025418	chr8	-	820	5	NNC	ENSMUSG00000006589.9	novel	849	5	NA	NA	28	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTCTCCTCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	123303601	123301374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_123301767_123301875_123301955_123302140_123302269_123303249_123303361_123303491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025419	chr8	-	677	1	Genic_Genomic	ENSMUSG00000015027.12	novel	NA	NA	NA	NA	32487	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCCTGGTCTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123305656	123304979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_123305000_123305700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025420	chr8	-	733	2	ISM	ENSMUSG00000015027.12	ENSMUST00000212319.2	2111	12	30254	176	30254	-176	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCCACATAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	123307889	123305303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123305937_123307789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025421	chr8	+	397	4	FSM	ENSMUSG00000015013.10	ENST00000567895.5	397	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGGAAAGCAAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	123338380	123341153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_123338433_123339827_123339978_123340659_123340748_123341046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025422	chr8	+	386	4	NNC	ENSMUSG00000015013.10	novel	397	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAGGAAAGCAAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	123338380	123341153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_123338433_123339838_123339978_123340659_123340748_123341046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025423	chr8	+	329	3	FSM	ENSMUSG00000015013.10	ENST00000567312.5	322	3	-2	-5	2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCAAGGGAACCACGT	NA	NA	NA	NA	NA	NA	NA	NA	123338386	123341158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_123338433_123339804_123339976_123341046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025424	chr8	+	728	3	ISM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	2275	710	2271	-710	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGCAAAGCGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	123340659	123342689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123340748_123341046_123341127_123342129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025425	chr8	+	646	1	ISM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	4369	0	4365	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAGTGAGCCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	123342753	123343399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123342800_123343400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025426	chr8	+	975	4	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	-380	7652	25	-7652	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGGGTGCCATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	123574729	123586100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025427	chr8	+	798	5	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	10921	3478	10921	-3478	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAACAGCTGCAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	123586030	123590274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025428	chr8	+	801	4	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	13607	2297	13607	-2297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGCGTCAGCCAGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	123588716	123591455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123588903_123590043_123590298_123590981_123591125_123591237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025429	chr8	+	819	4	ISM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	14931	1845	14931	-1845	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTAGGCGTCAGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123590040	123591907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123590298_123590981_123591125_123591237_123591478_123591728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025430	chr8	+	797	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	16275	1765	15870	-1381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCGAGGGCCACAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	123590979	123592371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123591125_123591237_123591478_123591728_123591969_123592066_123592204_123592336
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025431	chr8	+	1180	5	ISM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	16713	-3	16308	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCCAGTGCCACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	123591417	123594139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123591478_123591728_123591969_123592066_123592204_123592336_123592502_123593561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025432	chr8	+	722	2	NNC	ENSMUSG00000031962.7	novel	3251	14	NA	NA	17231	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGATCACAGGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	123592340	123594127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_123592497_123593561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025433	chr8	-	642	1	ISM	ENSMUSG00000035569.18	ENST00000301030.10	9166	12	158276	0	32009	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTACATGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	123610717	123610075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123610100_123610700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025434	chr8	-	872	5	ISM	ENSMUSG00000035569.18	ENST00000642695.1	929	6	125904	0	-115	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCTCCAGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123642841	123625299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025435	chr8	+	782	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTCTTTGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123829088	123831985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025436	chr8	+	509	4	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	10	-1887	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCCTGCGGGGCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	123829098	123830096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_123829185_123829395_123829502_123829583_123829726_123829921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025437	chr8	+	542	5	ISM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	46	1281	46	-1281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTAGGCTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	123829134	123830702	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025438	chr8	+	583	4	ISM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	486	0	486	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123829574	123831983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_123829726_123829921_123830096_123830636_123830694_123831782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025439	chr8	+	541	4	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	513	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAAAAGCTGGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	123829601	123831973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_123829726_123829921_123830091_123830636_123830694_123831782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025440	chr8	+	1138	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212411.2	2617	2	0	1479	0	-1479	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGCCAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	123891993	123898409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_123892257_123897534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025441	chr8	-	899	2	Antisense	novelGene_ENSMUSG00000110537.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCCGGGCGACTCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	123898265	123892088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr8_-_123892262_123897539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025442	chr8	+	906	1	Genic_Genomic	ENSMUSG00000110537.2	novel	NA	NA	NA	NA	-600	1	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCATTAAAGGATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	123898983	123899889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_123899000_123899900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025443	chr8	+	581	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	30	504	30	-504	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCTTCTCAAGTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	123899613	123905000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_123899783_123904588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025444	chr8	+	448	1	Genic_Genomic	ENSMUSG00000110537.2	novel	NA	NA	NA	NA	5480	7	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTCTTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123905063	123905511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_123905100_123905500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025445	chr8	-	1154	1	Genic_Genomic	ENSMUSG00000000743.10	novel	NA	NA	NA	NA	4820	1	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGACTTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	123932155	123931001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_123931000_123932200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025446	chr8	-	1571	4	ISM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	4648	378	2124	-378	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCTCTGTAGGCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	123934851	123931380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025447	chr8	-	421	4	FSM	ENSMUSG00000000743.10	ENST00000675778.1	418	4	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTCTGTGGGGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	123936975	123932877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_123933071_123934211_123934341_123935759_123935838_123936954
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025448	chr8	-	195	1	NIC	ENSMUSG00000000743.10	novel	2140	7	NA	NA	3902	2	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTCTGTGGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	123933073	123932878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_123932900_123933100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025449	chr8	-	404	3	NNC	ENSMUSG00000000743.10	novel	418	4	NA	NA	1136	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123935839	123932879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_123933071_123934207_123934341_123935759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025450	chr8	-	392	3	NNC	ENSMUSG00000000743.10	novel	418	4	NA	NA	1135	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123935840	123932879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_123933071_123934211_123934341_123935768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025451	chr8	-	520	4	ISM	ENSMUSG00000000743.10	ENST00000550102.5	538	5	1136	-1	1136	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123935839	123932879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123933071_123934211_123934341_123934729_123934850_123935759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025452	chr8	-	390	3	NNC	ENSMUSG00000000743.10	novel	418	4	NA	NA	1134	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123935841	123932879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_123933071_123934223_123934341_123935759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025453	chr8	-	318	2	ISM	ENSMUSG00000000743.10	ENST00000535997.7	582	5	2628	25	2628	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGGACCAGCTGTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	123934347	123932905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123933088_123934211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025454	chr8	+	557	1	FSM	ENSMUSG00000069862.7	ENSMUST00000139165.2	399	1	-107	-51	-107	51	mono-exon	FALSE	NA	NA	NA	NA	NA	485	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTACATTTCAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	123933254	123933811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_123933300_123933800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025455	chr8	+	477	2	Genic_Genomic	ENSMUSG00000069862.7	novel	399	1	NA	NA	-81	48	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGCCTACATTTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	123933280	123933808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_123933324_123933374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025456	chr8	-	187	2	ISM	ENSMUSG00000000743.10	ENST00000535997.7	582	5	1178	1820	1178	-1820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCCAAACCATGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	123935797	123934700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123934850_123935759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025457	chr8	+	567	2	FSM	ENSMUSG00000048478.8	ENSMUST00000212637.2	569	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATCCTTTCCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	123939638	123948785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_123939977_123948556
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025458	chr8	-	616	1	ISM	ENSMUSG00000001062.19	ENSMUST00000122363.8	2952	15	11377	0	11121	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATGTGACTTGTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	123969710	123969094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_123969100_123969700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025459	chr8	+	626	3	ISM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	73	15126	73	-15126	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCAGGATGTGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	124059549	124081114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124059775_124073378_124073423_124080757
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025460	chr8	+	673	1	NIC	ENSMUSG00000001472.18	novel	2572	17	NA	NA	5332	7	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATATGGCCTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	124129883	124130556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_124129900_124130600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025461	chr8	+	1663	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	205	0	39	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	124138367	124148754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025462	chr8	+	1458	2	ISM	ENSMUSG00000062380.5	ENSMUST00000212743.2	776	4	7407	-921	7407	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	124145735	124148754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124145790_124147350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025463	chr8	+	1410	1	NIC	ENSMUSG00000062380.5	novel	1868	4	NA	NA	9016	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	124147344	124148754	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_124147300_124148800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025464	chr8	+	1433	1	ISM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	18852	0	14055	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	124188576	124190009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124188600_124190000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025465	chr8	-	843	1	ISM	ENSMUSG00000031970.17	ENSMUST00000177240.8	1463	3	8861	0	8861	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGACCTGCCCGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	124233268	124232425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124232400_124233300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025466	chr8	-	891	2	ISM	ENSMUSG00000031970.17	ENSMUST00000176155.2	1677	4	6240	402	6167	-402	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGACAGTTCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	124235962	124232827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124233578_124235821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025467	chr8	+	325	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	-12	12340	10	-12340	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGAGCTGCGCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	124245582	124249805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124245692_124247342_124247430_124249676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025468	chr8	+	448	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	1792	11122	1792	-11122	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCCACGCTGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	124247386	124251023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124247430_124249676_124249875_124250816
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025469	chr8	+	393	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	5225	8808	5225	-8808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTCACGGACATCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	124250819	124253337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124251024_124252357_124252413_124253203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025470	chr8	+	381	2	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	7607	7322	7607	-7322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGCTCAAGTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	124253201	124254823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124253410_124254650
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025471	chr8	+	366	3	ISM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	9137	4388	9137	-4388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCCGCAAACTTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	124254731	124257757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124254819_124255116_124255204_124257565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025472	chr8	+	556	3	ISM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	11991	0	11969	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGTCGTTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	124257563	124263389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124257776_124259991_124260058_124263111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025473	chr8	+	280	1	NIC	ENSMUSG00000040220.11	novel	1681	11	NA	NA	17515	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGTCGTTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	124263109	124263389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_124263100_124263400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025474	chr8	+	361	3	ISM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	-64	7045	19	-7045	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCTTCTTATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	124532742	124554179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124532906_124550552_124550634_124554062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025475	chr8	+	260	3	ISM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	17745	5427	17745	-5427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTCACCTCCCCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	124550551	124555797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124550634_124554062_124554178_124555734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025476	chr8	+	331	3	ISM	ENSMUSG00000019478.18	ENSMUST00000117702.2	1080	7	21258	4098	21258	-4098	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGACTTTTTCCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	124554064	124557126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124554178_124555734_124555798_124556971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025477	chr8	+	269	2	NNC	ENSMUSG00000019478.18	novel	1080	7	NA	NA	24153	-1585	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCCTTTCCCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	124556959	124559639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_124557131_124559541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025478	chr8	+	421	3	ISM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	26817	403	26734	399	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCACACGTACCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	124559540	124561623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_124559638_124560753_124560887_124561432
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025479	chr8	+	229	1	Genic_Genomic	ENSMUSG00000019478.18	novel	NA	NA	NA	NA	28995	4	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACTGTCCTGCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124561801	124562030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_124561800_124562000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025480	chr8	-	1690	1	NIC	ENSMUSG00000031971.16	novel	2390	3	NA	NA	17010	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCTTGCTAGTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	124569259	124567569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_124567600_124569300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025481	chr8	-	1445	7	FSM	ENSMUSG00000031972.6	ENSMUST00000034453.6	1446	7	8	-7	8	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGGTCTTTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	124621482	124618500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_124618892_124618967_124619150_124619282_124619475_124619571_124619734_124619884_124620210_124620307_124620449_124621430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025482	chr8	-	247	2	ISM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	33978	17375	33978	-17375	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCACACTGGTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	124642026	124641236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124641371_124641913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025483	chr8	-	253	2	ISM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	19862	30006	19862	-30006	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCACCTAAGATCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	124656142	124653867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124653961_124655982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025484	chr8	-	284	2	ISM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	18284	32121	18284	-32121	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATCGAAGATCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	124657720	124655982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124656141_124657594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025485	chr8	-	261	3	ISM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	12331	36306	12331	-36306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAACCAGATGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	124663673	124660167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124660254_124662825_124662897_124663569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025486	chr8	-	677	1	ISM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	29987	0	18039	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTGTGTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	124679874	124679197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124679200_124679900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025487	chr8	-	876	6	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	1249	9589	1249	-9589	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAAATCAACAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	124696664	124688788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025488	chr8	-	253	2	ISM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	53	13419	53	-13419	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAGACTCTCACAGACC	NA	NA	NA	NA	NA	NA	NA	NA	124748083	124736475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_124736573_124747927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025489	chr8	+	923	2	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	109440	1605	109440	-1605	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTTGTGAACCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	125067569	125070856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125067678_125070041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025490	chr8	+	933	1	ISM	ENSMUSG00000092329.2	ENSMUST00000127664.2	3953	16	4433949	0	4433949	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCCGCTGTCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	125071528	125072461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125071500_125072500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025491	chr8	+	572	5	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	133	16961	133	-16961	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTGGCTGGCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	125303015	125324405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125303097_125315771_125315842_125318418_125318538_125321367_125321502_125324237
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025492	chr8	+	616	5	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	21355	9106	21355	-9106	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCGCCAACATGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	125324237	125332260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125324407_125325448_125325533_125327140_125327227_125330928_125331090_125332144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025493	chr8	+	612	4	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	24261	8722	24261	-8722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGAGCCCATCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	125327143	125332644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125327227_125330928_125331090_125332144_125332303_125332434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025494	chr8	+	576	4	NNC	ENSMUSG00000031981.8	novel	1794	16	NA	NA	24272	-8751	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTCTGAGAAGAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	125327154	125332615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_+_125327231_125330928_125331090_125332144_125332303_125332434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025495	chr8	+	568	4	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	28043	6636	28043	-6636	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTCCTCTGCTGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	125330925	125334730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125331090_125332144_125332303_125332434_125332644_125334693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025496	chr8	+	487	4	ISM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	29261	5453	29261	-5453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGCAGCCGCCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	125332143	125335913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125332303_125332434_125332644_125334693_125334731_125335831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025497	chr8	-	1889	1	ISM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	25725	0	25725	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGATCTGTTTCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	125364383	125362494	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_125362500_125364400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025498	chr8	-	2417	3	ISM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	11946	370	11946	-370	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCCGCTGTATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	125378162	125362864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_125364704_125365829_125366355_125378109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025499	chr8	-	868	1	NIC	ENSMUSG00000037300.20	novel	2970	20	NA	NA	49765	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	125398938	125398070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_-_125398100_125398900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025500	chr8	-	702	4	ISM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	47542	0	47522	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCTTGTCTTCACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	125401181	125398474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025501	chr8	-	465	3	ISM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	33277	12021	33257	-12021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTGGAAACTTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	125415446	125410495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_125410627_125411216_125411374_125415269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025502	chr8	+	424	2	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	1542	13921	1487	-13921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGGCTCTGGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	125521317	125541905	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125521645_125541808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025503	chr8	+	401	4	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	22054	8808	21999	-8808	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGGACAGCGAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	125541829	125547018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125541905_125543742_125543866_125545436_125545548_125546926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025504	chr8	+	382	3	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	25697	5819	25642	-5819	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTAGCTGCTGCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	125545472	125550007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125545548_125546926_125547087_125549860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025505	chr8	+	557	3	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	30118	2848	30063	-2848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGCTCCCTGAACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	125549893	125552978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125550007_125551456_125551596_125552673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025506	chr8	+	489	3	ISM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	32946	-2	32891	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCCCGCTGCCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	125552721	125555828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125552978_125554837_125555001_125555758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025507	chr8	-	1034	1	Genic_Genomic	ENSMUSG00000031984.9	novel	NA	NA	NA	NA	23601	2	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGATGAGGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	125566258	125565224	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_125565200_125566300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025508	chr8	-	1073	2	ISM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	22613	466	22613	-466	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGTGTGGGTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	125567246	125565692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_125566706_125567186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025509	chr8	-	684	2	NNC	ENSMUSG00000031987.7	novel	1940	6	NA	NA	38396	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAAGTAGAGCCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125637413	125636033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr8_-_125636240_125636935
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025510	chr8	-	834	3	ISM	ENSMUSG00000031987.7	ENST00000366641.4	1940	6	37273	0	37273	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCAAGTAGAGCCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125638536	125636033	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_125636240_125636931_125637503_125638479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025511	chr8	-	735	3	ISM	ENSMUSG00000031987.7	ENST00000366641.4	1940	6	34927	929	34927	-929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCTCCTGCGATGATT	NA	NA	NA	NA	NA	NA	NA	NA	125640882	125636962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_125637503_125638479_125638548_125640755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025512	chr8	-	958	3	ISM	ENSMUSG00000031987.7	ENST00000366641.4	1940	6	140	4719	140	-4719	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCCACTCACGGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	125675669	125640752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_125640893_125642399_125642520_125674971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025513	chr8	+	809	3	ISM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	11508	1148	11456	-1148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCATTTGCATACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	125751243	125759783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125751377_125755506_125755635_125759235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025514	chr8	+	570	1	ISM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	20626	0	20574	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCCTCTGGTTAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	125760361	125760931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_125760400_125760900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025515	chr8	-	1004	1	ISM	ENSMUSG00000001995.10	ENSMUST00000108775.2	6365	21	73641	3	73538	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTTGCCTGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	126145808	126144804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126144800_126145800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025516	chr8	-	1168	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	69903	266	69903	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAACACTCTTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	126149443	126145070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126146031_126148619_126148702_126149317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025517	chr8	-	468	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	49868	15157	49868	-15147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGACTGGTCCCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	126169478	126159961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126160049_126165998_126166223_126169321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025518	chr8	-	526	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	47960	21208	47960	-21198	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTACGGAGTAAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	126171386	126166012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126166223_126169321_126169476_126171224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025519	chr8	-	708	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	44715	24574	44715	-24564	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTCTGAAGTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	126174631	126169378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126169476_126171224_126171450_126174245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025520	chr8	-	593	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	42173	29440	42173	-29430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCCAGCATACGCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	126177173	126174244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126174632_126176619_126176724_126177071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025521	chr8	-	1188	4	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	23853	33862	23853	-33852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACGATGGGTAAGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	126195493	126178666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126178742_126180039_126180298_126190890_126191166_126194913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025522	chr8	-	793	4	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	17682	50257	17682	-50247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTAACTGTTCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126201664	126195061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126195491_126196486_126196645_126200236_126200341_126201562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025523	chr8	-	505	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	10419	56758	10419	-56748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCATGTGTGCAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	126208927	126201562	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126201738_126206892_126207082_126208786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025524	chr8	-	1237	3	ISM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	583	62088	583	-62078	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTACAGTGTGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	126218763	126206892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_126207082_126208786_126208921_126217849
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025525	chr8	+	1460	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	37	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGTCTAATTAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	126461013	126465918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025526	chr8	+	1413	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	317	12272	12	-12272	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGTGCCTTCACAACAC	NA	NA	NA	NA	NA	NA	NA	NA	126637505	126661907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_126638173_126650756_126650938_126652813_126652963_126654269_126654446_126661667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025527	chr8	+	792	5	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	13646	10112	13341	-10112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCCAGCCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126650834	126664067	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_126650938_126652813_126652963_126654269_126654446_126661667_126661909_126663944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025528	chr8	+	819	4	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	26751	5446	26446	-5446	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGCCATTCCTCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	126663939	126668733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_126664068_126665439_126665591_126666587_126666686_126668291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025529	chr8	+	697	4	ISM	ENSMUSG00000031853.6	ENST00000366624.8	2257	10	27957	0	27957	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTCTCTTTGATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	126665450	126761264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_126665591_126666587_126666686_126668291_126668730_126761243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025530	chr8	+	710	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	37	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGCGTGCTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	127149290	127152172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_127149570_127151741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025531	chr8	+	432	1	NIC	ENSMUSG00000051671.8	novel	747	2	NA	NA	2474	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGCGTGCTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	127151740	127152172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr8_+_127151700_127152200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025532	chr8	-	2717	1	ISM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	2974	0	2974	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAAGACCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127317751	127315034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_127315000_127317800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025533	chr8	-	3600	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	40	1440	40	-1440	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	127320685	127316474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_127318568_127319178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025534	chr8	+	704	2	FSM	ENSMUSG00000097060.2	ENST00000436039.1	714	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCGGCCATGTCCGCACA	NA	NA	NA	NA	NA	NA	NA	NA	127317711	127320164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_+_127318353_127320101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025535	chr8	-	2380	1	Genic_Genomic	ENSMUSG00000093904.3	novel	NA	NA	NA	NA	12798	4	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTCTATTTCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	127659792	127657412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_-_127657400_127659800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025536	chr8	-	2791	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	39	2072	39	-2072	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTCAGCTGTATTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	127672551	127659488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025537	chr8	-	499	1	ISM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	23401	0	23400	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTAGTGTAATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	127674420	127673921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_127673900_127674400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025538	chr8	-	389	2	ISM	ENSMUSG00000033931.10	ENSMUST00000212618.2	1509	10	940	16356	940	-16356	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGAAGGGGGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	127696880	127692131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_-_127692373_127696732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025539	chr8	+	444	2	ISM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	62	240997	34	-240479	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCATGGCTGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	127790881	127888061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_127791224_127887959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025540	chr8	+	464	3	ISM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	97138	96069	96863	-95551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACACCTCCACTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	127887957	128032989	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_127888062_128003501_128003683_128032810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025541	chr8	+	455	3	ISM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	212720	78404	-22526	-77886	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTAGCCTTGCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	128003539	128050654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128003683_128032810_128032990_128050521
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025542	chr8	+	436	4	ISM	ENSMUSG00000025812.19	ENSMUST00000108752.10	3497	13	17729	31686	17729	-31686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTACTTCTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	128050519	128096854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128050654_128083755_128083848_128086207_128086292_128096728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025543	chr8	+	477	2	ISM	ENSMUSG00000025812.19	ENSMUST00000108752.10	3497	13	63935	30216	63935	-30216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGGCAAGAGGCTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	128096725	128098324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128096855_128097976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025544	chr8	+	492	2	ISM	ENSMUSG00000025812.19	ENSMUST00000108752.10	3497	13	65186	25207	65186	-25207	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTCAAGGCAGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	128097976	128103333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128098360_128103224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025545	chr8	+	429	3	ISM	ENSMUSG00000025812.19	ENSMUST00000160766.8	4949	23	312160	223271	70464	-13360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGAGCCGGTCATTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	128103254	128115180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128103365_128104666_128104796_128114990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025546	chr8	+	356	2	ISM	ENSMUSG00000025812.19	ENSMUST00000108752.10	3497	13	82204	12561	82204	-12561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACAGAGGATGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	128114994	128115979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128115180_128115808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025547	chr8	+	403	3	ISM	ENSMUSG00000025812.19	ENSMUST00000162456.8	3204	19	89719	27686	83021	2881	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTCTCTGACCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	128115811	128131939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128115980_128125080_128125232_128131855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025548	chr8	+	434	3	ISM	ENSMUSG00000025812.19	ENSMUST00000162456.8	3204	19	98986	23498	92288	7069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATGCCAGTCAATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	128125078	128136127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128125232_128131855_128132046_128136036
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025549	chr8	+	416	3	ISM	ENSMUSG00000025812.19	ENSMUST00000162456.8	3204	19	109943	17357	103245	13210	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGACCTGTGAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	128136035	128142268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128136189_128137209_128137255_128142050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025550	chr8	+	574	3	ISM	ENSMUSG00000025812.19	ENSMUST00000026921.13	4050	24	351004	150420	109258	27241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTCTCAAAGGTACCACT	NA	NA	NA	NA	NA	NA	NA	NA	128142048	128186866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128142279_128153002_128153235_128186754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025551	chr8	+	580	3	ISM	ENSMUSG00000025812.19	ENSMUST00000026921.13	4050	24	361958	136190	120212	41471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCTGGCAGCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	128153002	128201096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128153235_128186754_128186866_128200859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025552	chr8	+	472	3	ISM	ENSMUSG00000025812.19	ENSMUST00000026921.13	4050	24	395707	17624	153961	-17624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTTTGGTCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	128186751	128319662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128186866_128200859_128201097_128319541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025553	chr8	+	583	3	ISM	ENSMUSG00000025812.19	ENSMUST00000026921.13	4050	24	528509	28	286763	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAAGGATGGCAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	128319553	128337258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128319663_128329539_128329668_128336912
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025554	chr8	+	897	2	ISM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	546083	-1	304140	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128336930	128338767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_128337390_128338329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025555	chr8	+	443	1	Genic_Genomic	ENSMUSG00000025812.19	novel	NA	NA	NA	NA	305535	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTGTCTCTAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128338325	128338768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_128338300_128338800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025556	chr8	+	256	2	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	3838	69130	3838	-69130	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGACTATGAGACACAT	NA	NA	NA	NA	NA	NA	NA	NA	129089740	129145315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129089875_129145193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025557	chr8	+	393	2	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	59285	62018	59285	-62018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGGATGGATTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	129145187	129152427	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129145376_129152222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025558	chr8	+	276	2	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	66414	55931	66414	-55931	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATCTCTGAAGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	129152316	129158514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129152451_129158372
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025559	chr8	+	341	2	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	101190	19422	101190	-19422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGAGGTGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	129187092	129195023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129187238_129194827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025560	chr8	+	354	2	ISM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	109035	11683	109035	-11683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTGGAAGGTAACTA	NA	NA	NA	NA	NA	NA	NA	NA	129194937	129202762	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129195160_129202630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025561	chr8	+	252	2	ISM	ENSMUSG00000025810.10	ENSMUST00000026917.10	3597	17	133741	5432	133603	-5432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACATGTCCGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	129219505	129224412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129219646_129224300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025562	chr8	+	287	2	ISM	ENSMUSG00000025810.10	ENSMUST00000026917.10	3597	17	138618	4762	138480	-4762	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGATGGGTTTGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129224382	129225082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129224573_129224985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025563	chr8	+	793	6	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	9107	10627	9107	-10627	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAATTTACTCTGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	129442656	129449028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025564	chr8	+	788	5	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	10547	10216	10547	-10216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGATCCCAAGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	129444096	129449439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025565	chr8	+	2191	6	ISM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	13256	37	13256	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGGCTCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	129446805	129459682	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025566	chr8	+	1807	5	ISM	ENSMUSG00000025809.16	ENST00000423113.5	3566	15	15854	0	15854	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATGTGTTAAAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	129449403	129459719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129449514_129450676_129450910_129452500_129452668_129453463_129453545_129458503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025567	chr8	+	1542	4	ISM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	15890	148	15890	-148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGGCAGGGCCCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	129449439	129459507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr8_+_129449514_129450676_129450910_129452500_129452732_129458503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025568	chr8	+	1123	1	Genic_Genomic	ENSMUSG00000025809.16	novel	NA	NA	NA	NA	25048	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTGTTAAAGATATGG	NA	NA	NA	NA	NA	NA	NA	NA	129458597	129459720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_129458600_129459700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025569	chr8	-	1775	5	FSM	ENSMUSG00000071302.11	ENSMUST00000190157.7	1776	5	3	-2	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAGAAAATATGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	129960524	129942832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr8_-_129944231_129946582_129946633_129948024_129948086_129948304_129948432_129960385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025570	chr8	+	780	1	Genic_Genomic	ENSMUSG00000110605.2	novel	NA	NA	NA	NA	18421	4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATCAGTGTGTTAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	130008549	130009329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr8_+_130008500_130009300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025571	chr9	+	426	2	Genic_Genomic	ENSMUSG00000091028.2	novel	651	4	NA	NA	-666	-71	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATTTCGTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	3000255	3002259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_3000422_3001999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025572	chr9	+	657	2	NNC	ENSMUSG00000091028.2	novel	651	4	NA	NA	1	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3000922	3002330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3001445_3002195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025573	chr9	+	440	2	Fusion	ENSMUSG00000096385.8_ENSMUSG00000091028.2	novel	651	4	NA	NA	439	1222	intron_retention	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCATTTTTCAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3001360	3003552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Fusion_chr9_+_3001524_3003275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025574	chr9	+	435	2	Fusion	ENSMUSG00000096385.8_ENSMUSG00000091028.2	novel	651	4	NA	NA	1099	1236	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTCAAGTGGATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	3002020	3003566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Fusion_chr9_+_3002380_3003490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025575	chr9	+	440	2	Fusion	ENSMUSG00000096385.8_ENSMUSG00000091028.2	novel	651	4	NA	NA	1166	1247	intron_retention	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTCTCATTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	3002087	3003577	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Fusion_chr9_+_3002235_3003284
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025576	chr9	+	361	2	Fusion	ENSMUSG00000096385.8_ENSMUSG00000091028.2	novel	651	4	NA	NA	-1192	1285	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3002153	3003615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Fusion_chr9_+_3002380_3003480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025577	chr9	+	520	2	NNC	ENSMUSG00000096385.8	novel	684	5	NA	NA	-696	-1558	intron_retention	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTCTAAATTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	3002649	3003636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3002809_3003275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025578	chr9	+	658	3	NIC	ENSMUSG00000096385.8	novel	684	5	NA	NA	23	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCATGTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3003368	3005194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_3003698_3004571_3004776_3005069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025579	chr9	+	656	2	NIC	ENSMUSG00000096385.8	novel	672	4	NA	NA	22	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCATGTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3004478	3005194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_3005010_3005069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025580	chr9	+	358	2	NIC	ENSMUSG00000096385.8	novel	684	5	NA	NA	86	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCATGTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3004542	3005194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_3004776_3005069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025581	chr9	+	438	2	Fusion	ENSMUSG00000096519.2_ENSMUSG00000096385.8	novel	669	4	NA	NA	1560	-26	intron_retention	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCATGATTTTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	3006718	3014318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Fusion_chr9_+_3006843_3014004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025582	chr9	+	441	2	NNC	ENSMUSG00000096519.2	novel	669	4	NA	NA	-1823	49	intron_retention	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCCTTGCCATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3011316	3014393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3011369_3014004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025583	chr9	+	425	2	Genic_Genomic	ENSMUSG00000096519.2	novel	669	4	NA	NA	-984	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCATATTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	3012155	3014336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_3012258_3014013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025584	chr9	+	486	2	NNC	ENSMUSG00000096519.2	novel	669	4	NA	NA	68	49	intron_retention	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCCTTGCCATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3013207	3014393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3013314_3014013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025585	chr9	+	523	2	ISM	ENSMUSG00000096519.2	ENSMUST00000143083.3	669	4	264	-49	264	49	intron_retention	TRUE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCCTTGCCATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3013403	3014393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_3013538_3014004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025586	chr9	+	456	2	NNC	ENSMUSG00000096519.2	novel	669	4	NA	NA	329	49	intron_retention	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCCTTGCCATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3013468	3014393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3013545_3014013
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025587	chr9	-	439	2	Antisense	novelGene_ENSMUSG00000096519.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCGAGGAAAACTGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3014380	3013470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_3013541_3014011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025588	chr9	+	550	2	NNC	ENSMUSG00000096519.2	novel	669	4	NA	NA	831	470	intron_retention	TRUE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATGTCCTACAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	3013970	3014814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3014394_3014687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025589	chr9	+	491	2	NNC	ENSMUSG00000096519.2	novel	669	4	NA	NA	869	215	intron_retention	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCAGTTTTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3014008	3014559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3014394_3014453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025590	chr9	+	426	2	NNC	ENSMUSG00000096519.2	novel	669	4	NA	NA	901	181	intron_retention	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATTTGTCAACTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	3014040	3014525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3014423_3014481
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025591	chr9	-	403	2	Antisense	novelGene_ENSMUSG00000096519.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGGCAAGAAAACTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	3014812	3014113	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_3014418_3014713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025592	chr9	+	347	2	Genic_Genomic	ENSMUSG00000074564.4	novel	669	5	NA	NA	269	-647	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATATTCCATGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	3015922	3016563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_3016148_3016441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025593	chr9	+	432	2	NNC	ENSMUSG00000095547.2	novel	681	5	NA	NA	-114	283	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCCTTGCCATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3018638	3021174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3018691_3020794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025594	chr9	+	553	2	NIC	ENSMUSG00000095547.2	novel	681	5	NA	NA	0	283	intron_retention	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCCTTGCCATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3020154	3021174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_3020319_3020785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025595	chr9	+	444	2	NNC	ENSMUSG00000095547.2	novel	681	5	NA	NA	5	172	intron_retention	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATTTTTCAAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3020159	3021063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3020326_3020785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025596	chr9	-	441	2	Antisense	novelGene_ENSMUSG00000095547.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAAACATGCACTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	3021077	3020165	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_3020322_3020792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025597	chr9	+	531	2	NNC	ENSMUSG00000095547.2	novel	681	5	NA	NA	17	280	intron_retention	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTCCTTGCCATATT	NA	NA	NA	NA	NA	NA	NA	NA	3020171	3021171	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3020326_3020794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025598	chr9	-	416	2	Antisense	novelGene_ENSMUSG00000095547.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTCCACTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	3021109	3020455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_3020555_3020792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025599	chr9	+	484	2	NNC	ENSMUSG00000095547.2	novel	675	5	NA	NA	302	284	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTGCCATATTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3020456	3021175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3020560_3020794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025600	chr9	+	475	2	NNC	ENSMUSG00000095547.2	novel	675	5	NA	NA	302	273	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTTTCTGTTTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	3020456	3021164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3020562_3020794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025601	chr9	+	436	2	NNC	ENSMUSG00000095547.2	novel	675	5	NA	NA	317	251	intron_retention	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGACATTTCTAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	3020471	3021142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3020532_3020766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025602	chr9	+	540	2	NIC	ENSMUSG00000095547.2	novel	681	5	NA	NA	609	4	intron_retention	TRUE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTACAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	3020763	3021597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_3021175_3021468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025603	chr9	+	432	2	NNC	ENSMUSG00000095547.2	novel	681	5	NA	NA	625	146	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTTTTCAGGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	3020779	3021739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3021175_3021702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025604	chr9	+	427	2	NNC	ENSMUSG00000095547.2	novel	681	5	NA	NA	646	-306	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGATTTTGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	3020800	3021287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3021175_3021234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025605	chr9	+	523	2	NIC	ENSMUSG00000095186.2	novel	681	5	NA	NA	32	-650	intron_retention	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCGCCATATTTCACG	NA	NA	NA	NA	NA	NA	NA	NA	3023578	3024568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_3023945_3024411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025606	chr9	-	436	2	Antisense	novelGene_ENSMUSG00000095186.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGAAAATTTAGAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	3024531	3023624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_3023948_3024418
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025607	chr9	+	435	2	NNC	ENSMUSG00000095186.2	novel	681	5	NA	NA	118	-650	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCGCCATATTTCACG	NA	NA	NA	NA	NA	NA	NA	NA	3023664	3024568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3023952_3024420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025608	chr9	+	432	2	NNC	ENSMUSG00000095186.2	novel	681	5	NA	NA	142	-336	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTACATTTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	3023688	3024882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3024099_3024860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025609	chr9	+	454	2	NNC	ENSMUSG00000095186.2	novel	681	5	NA	NA	142	-548	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGTTTTTCACTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	3023688	3024670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3024099_3024626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025610	chr9	+	424	2	NNC	ENSMUSG00000095186.2	novel	681	5	NA	NA	209	-979	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGGATGTTTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	3023755	3024239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3024099_3024158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025611	chr9	+	463	2	NNC	ENSMUSG00000095186.2	novel	681	5	NA	NA	214	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTCAAAGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3023760	3025218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3024099_3025093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025612	chr9	+	394	2	NNC	ENSMUSG00000095186.2	novel	681	5	NA	NA	517	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTCAAAGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3024063	3025218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3024333_3025093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025613	chr9	+	548	2	NIC	ENSMUSG00000095891.8	novel	684	3	NA	NA	129	0	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3025545	3026387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_3025969_3026262
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025614	chr9	+	673	2	NIC	ENSMUSG00000096736.2	novel	672	4	NA	NA	5	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3034603	3035805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_3035152_3035680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025615	chr9	+	894	3	NNC	ENSMUSG00000025899.15	novel	1267	6	NA	NA	23946	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGATCACTTATCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	3369726	3385593	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_3369919_3382693_3382844_3385041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025616	chr9	+	1292	1	ISM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	50178	4207	39875	18	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATGTAAATGTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	3385655	3386947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_3385700_3386900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025617	chr9	+	769	1	Genic_Genomic	ENSMUSG00000025898.7	novel	NA	NA	NA	NA	74877	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGATTATCTTGTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	3478468	3479237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_3478500_3479200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025618	chr9	+	365	2	ISM	ENSMUSG00000041624.11	ENST00000347596.2	2394	8	102086	135421	102086	-135306	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCAAGTGCCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3634883	3759430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_3635183_3759364
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025619	chr9	+	440	3	ISM	ENSMUSG00000041624.11	ENSMUST00000115733.3	2243	8	226880	29307	226860	-29307	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAACAATGTCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	3759657	3865429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_3759882_3797237_3797382_3865357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025620	chr9	+	365	3	ISM	ENSMUSG00000041624.11	ENSMUST00000115733.3	2243	8	264534	93	264514	-93	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCATCGAGAATAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3797311	3894643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_3797382_3865357_3865513_3894503
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025621	chr9	+	321	1	ISM	ENSMUSG00000041624.11	ENST00000347596.2	2394	8	361733	0	361733	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGGTGAATAACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	3894530	3894851	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_3894500_3894900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025622	chr9	-	1673	1	Genic_Genomic	ENSMUSG00000025894.12	novel	NA	NA	NA	NA	13004	2	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGGCTTGACATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	4296463	4294790	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_4294800_4296500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025623	chr9	-	2107	5	ISM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	647	423	647	-423	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTAATATGGCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4308820	4295215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025624	chr9	+	2235	3	ISM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	3866	-21	3866	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAAGGGAAAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4313700	4331732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_4313807_4316826_4317072_4329848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025625	chr9	+	469	2	ISM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	4	2923	4	-2914	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCGTTGGTTCTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4376565	4383947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_4376624_4383536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025626	chr9	+	2704	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	43	-16	43	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAAGTTTATCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	4383577	4386877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_4384143_4384738
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025627	chr9	+	2147	1	Genic_Genomic	ENSMUSG00000041124.12	novel	NA	NA	NA	NA	1199	3	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTTTATCATTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	4384733	4386880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_4384700_4386900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025628	chr9	+	626	4	FSM	ENSMUSG00000025888.7	ENST00000534497.5	621	4	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCATACCAATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	5302994	5306773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_5303172_5303539_5303775_5306116_5306227_5306669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025629	chr9	+	614	4	NNC	ENSMUSG00000025888.7	novel	621	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGTATGTCATACCAATG	NA	NA	NA	NA	NA	NA	NA	NA	5302999	5306769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_5303172_5303542_5303775_5306116_5306227_5306669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025630	chr9	+	1191	2	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	13335	168	13261	-168	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATGTACCTATCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	5358764	5372864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_5358844_5371752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025631	chr9	+	1165	1	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	26438	0	26364	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCCTGTTCTCTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	5371867	5373032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_5371900_5373000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025632	chr9	+	1872	3	ISM	ENSMUSG00000032006.16	ENSMUST00000058692.9	3131	7	168825	327	168748	-327	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCTAAGCCAAGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	6337408	6378518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_6337442_6359702_6359918_6376894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025633	chr9	-	166	2	ISM	ENSMUSG00000047193.17	ENST00000650373.2	12743	88	72990	172083	72990	47927	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGTTTGTACATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	7102423	7101547	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_7101601_7102310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025634	chr9	-	163	2	ISM	ENSMUSG00000047193.17	ENSMUST00000139115.2	2892	19	4135	21397	2583	-21397	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCATAGGTATGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	7172830	7170871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_7171007_7172802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025635	chr9	+	323	3	ISM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	138	18258	-26	-18229	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGAAGACATTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	7184688	7188782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_7184883_7186767_7186860_7188745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025636	chr9	+	777	5	FSM	ENSMUSG00000032002.11	ENST00000531543.1	777	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTTGTGACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	7184714	7207011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_7184883_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025637	chr9	+	271	3	ISM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	4611	3520	4447	-3491	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACTCTTTTCAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	7189161	7203520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_7189254_7203262_7203372_7203450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025638	chr9	+	261	1	ISM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	23425	0	23230	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTTGCCTTCTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	7207944	7208205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_7207900_7208200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025639	chr9	+	608	1	FSM	ENSMUSG00000074516.7	ENSMUST00000213318.2	480	1	17	-145	17	145	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTCTCAGTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	7751742	7752350	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_7751700_7752400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025640	chr9	+	2909	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTAGTGTTTTGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	7764040	7794335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025641	chr9	+	2900	5	NNC	ENSMUSG00000050912.16	novel	2907	5	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	7764042	7794334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_7764314_7768290_7768342_7790842_7791110_7791317_7791466_7792171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025642	chr9	+	2897	5	NNC	ENSMUSG00000050912.16	novel	2907	5	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	7764044	7794334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_7764314_7768290_7768342_7790842_7791103_7791311_7791466_7792171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025643	chr9	-	133	2	ISM	ENSMUSG00000057367.13	ENST00000530675.5	1685	7	764	8189	764	-8189	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTGAGCAGGTAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	7833571	7826943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_7827011_7833505
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025644	chr9	-	1816	1	Genic_Genomic	ENSMUSG00000053110.14	novel	NA	NA	NA	NA	70548	1	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTCTCTGGGGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7933769	7931953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_7932000_7933800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025645	chr9	-	2807	7	NNC	ENSMUSG00000053110.14	novel	1243	7	NA	NA	2	-936	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTGCTTCTAGAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	8004315	7932935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_7934734_7936511_7936629_7938408_7938540_7952941_7953136_7973796_7973913_8001457_8001709_8004115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025646	chr9	+	492	2	ISM	ENSMUSG00000110161.2	ENSMUST00000211167.2	545	3	1096	0	1096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAAAAGTGGCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	8005926	8009270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_8006106_8008957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025647	chr9	-	353	3	ISM	ENSMUSG00000053070.6	ENST00000534360.1	411	4	238	-1	238	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTGAAATTTAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	8042504	8025953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_8026136_8037460_8037537_8042409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025648	chr9	-	379	4	NNC	ENSMUSG00000053070.6	novel	411	4	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGTGAAATTTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	8042713	8025954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_8026136_8037460_8037537_8042409_8042492_8042673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025649	chr9	-	403	4	FSM	ENSMUSG00000053070.6	ENST00000534360.1	411	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGTGAAATTTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	8042734	8025954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_8026136_8037460_8037537_8042409_8042492_8042670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025650	chr9	-	400	4	NNC	ENSMUSG00000053070.6	novel	411	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGTGAAATTTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	8042727	8025954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_8026136_8037460_8037537_8042405_8042492_8042670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025651	chr9	+	378	2	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	1373	61408	1373	-61408	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGGGCAATGGAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	8901841	8903731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_8902085_8903596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025652	chr9	+	360	3	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	3125	8807	3125	-8807	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAGCATGTCAGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	8903593	8956332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_8903749_8922599_8922717_8956244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025653	chr9	+	410	3	ISM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	57897	0	57897	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTCTTTGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	8958365	8965139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_8958462_8961396_8961555_8964983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025654	chr9	-	1790	1	ISM	ENSMUSG00000050730.18	ENSMUST00000093893.12	6116	23	242987	0	242676	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTCTTTTGTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	8996119	8994329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_8994300_8996100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025655	chr9	-	1854	2	ISM	ENSMUSG00000050730.18	ENST00000298815.13	3280	24	240548	-1043	240548	1043	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTACATGTTATAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	8998247	8995913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_8997687_8998166
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025656	chr9	-	420	1	ISM	ENSMUSG00000111503.2	ENSMUST00000214628.2	681	2	67564	0	67564	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCCTCTTTGGACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	11517286	11516866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_11516900_11517300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025657	chr9	-	488	2	FSM	ENSMUSG00000111503.2	ENSMUST00000214628.2	681	2	68	125	68	-125	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATTTTATGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	11584782	11516991	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_11517350_11584652
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025658	chr9	+	680	5	FSM	ENSMUSG00000079084.13	ENST00000680532.1	676	5	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGGTTGTAGACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	13248881	13282069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_13248988_13262360_13262454_13266811_13266937_13272649_13272821_13281884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025659	chr9	+	858	2	ISM	ENSMUSG00000079084.13	ENST00000679960.1	2445	8	84	39808	84	-29010	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTTAAATATGAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	13251770	13253055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_13252424_13252850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025660	chr9	+	1289	4	ISM	ENSMUSG00000079084.13	ENST00000679696.1	1746	7	19799	34	19799	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTGTGTATTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	13272647	13292865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_13272821_13281884_13282071_13289700_13290076_13292310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025661	chr9	+	1533	2	ISM	ENSMUSG00000031925.18_ENSMUSG00002075655.1	ENSMUST00000034401.15	2098	4	-1345	10012	-925	-10012	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAAGCAGCAACTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	13531596	13608627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_13532972_13608469
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025662	chr9	+	827	5	ISM	ENSMUSG00000031918.17	ENST00000674528.1	2362	15	29411	3794	6196	-3527	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACGTCATCTGCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	13706530	13713303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025663	chr9	+	304	3	ISM	ENSMUSG00000031918.17	ENST00000674528.1	2362	15	34162	2263	10947	-1996	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTATGATCTCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	13711281	13714834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_13711379_13713210_13713304_13714720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025664	chr9	+	722	3	ISM	ENSMUSG00000031918.17	ENST00000675438.1	1748	10	14383	-1	14383	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAAAAATGTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	13714717	13717098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_13714835_13716101_13716279_13716670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025665	chr9	+	309	1	ISM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	57763	0	17134	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	13717468	13717777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_13717500_13717800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025666	chr9	-	620	1	ISM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	18694	0	10273	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTAACAAAGGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	13719709	13719089	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_13719100_13719700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025667	chr9	-	638	2	ISM	ENSMUSG00000031922.13	ENSMUST00000124883.8	1643	9	8746	100	8746	-100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGCTTGAAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	13721236	13719579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_13720137_13721155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025668	chr9	-	617	4	ISM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	-64	10504	33	-10145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTACGGCACCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	13738315	13729624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_13729741_13730154_13730335_13732822_13732980_13738151
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025669	chr9	-	1296	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	279	2895	20	-2895	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATGTAGCCACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	14292259	14268180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_14269184_14291966
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025670	chr9	+	924	6	ISM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	1321	0	1291	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATACAGCTTATAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14413233	14421873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025671	chr9	-	266	1	Genic_Genomic	ENSMUSG00000031927.10	novel	NA	NA	NA	NA	12558	1	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTTCTTCTGTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	14669751	14669485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_14669500_14669800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025672	chr9	-	495	3	ISM	ENSMUSG00000031927.10	ENSMUST00000060330.5	688	4	4070	0	4053	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTTCTTCTGTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	14678256	14669486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_14669752_14672900_14673027_14678152
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025673	chr9	-	336	2	ISM	ENSMUSG00000031927.10	ENSMUST00000191047.7	654	4	9321	0	9321	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTTCTTCTGTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	14672988	14669486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_14669752_14672917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025674	chr9	-	406	3	ISM	ENSMUSG00000031927.10	ENSMUST00000060330.5	688	4	3	3428	3	-3428	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGAGGACTGAGAAGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	14682323	14672914	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_14673027_14678152_14678258_14682134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025675	chr9	-	1143	1	Genic_Genomic	ENSMUSG00000031931.5	novel	NA	NA	NA	NA	2209	5	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTTCTTGTCAATATT	NA	NA	NA	NA	NA	NA	NA	NA	14692051	14690908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_14690900_14692100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025676	chr9	-	1296	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	0	457	0	323	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATGTTTAGATGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	14694260	14691961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_14692908_14693910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025677	chr9	+	786	1	Genic_Genomic	ENSMUSG00000031928.16	novel	NA	NA	NA	NA	51664	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAACGTTTTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	14747635	14748421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_14747600_14748400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025678	chr9	-	1177	1	ISM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	42174	0	42174	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTGTCTTTCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	14914600	14913423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_14913400_14914600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025679	chr9	-	1608	2	ISM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	37501	3099	37501	-3099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAACTTTAAGCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	14919273	14916522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_14917514_14918656
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025680	chr9	-	120	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	14403	478	14403	-478	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTGATGTTTTACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	15176696	15173663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15173735_15176647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025681	chr9	-	121	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	12326	3523	12326	-3523	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGGGTAATCATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	15178773	15176708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15176766_15178709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025682	chr9	-	112	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	9380	5631	9380	-5631	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATTGAGGACCCCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	15181719	15178816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15178848_15181638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025683	chr9	-	112	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	8137	8582	8137	-8582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCACAAGAGGATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	15182962	15181767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15181824_15182906
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025684	chr9	-	105	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	7224	9820	7224	-9820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATGATAAGAAGTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	15183875	15183005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15183038_15183802
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025685	chr9	-	172	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	5432	10685	5432	-10685	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCAGATTAAGTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	15185667	15183870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15183956_15185580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025686	chr9	-	103	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	5311	12421	5311	-12421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCTTTGCCCAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	15185788	15185606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15185666_15185744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025687	chr9	-	105	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	2167	14151	2167	-14151	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGAAGAAGTCCCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	15188932	15187336	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15187362_15188852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025688	chr9	-	109	2	ISM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	193	15786	193	-15786	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTGCGAAGTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	15190906	15188971	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15189020_15190845
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025689	chr9	-	706	6	FSM	ENSMUSG00000031938.16	ENST00000617482.4	726	6	26	-6	26	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGCTAAGGTTAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	15209213	15196099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15205727_15205830_15205981_15206056_15209138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025690	chr9	-	182	1	ISM	ENSMUSG00000031938.16	ENSMUST00000180339.8	2756	9	21457	1473	12952	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGGTTAGCTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15196287	15196105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15196100_15196300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025691	chr9	-	578	4	ISM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	3410	0	3410	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGGTTAGCTAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15205829	15196105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15196288_15198651_15198769_15203295_15203473_15205727
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025692	chr9	-	363	3	NNC	ENSMUSG00000031938.16	novel	753	6	NA	NA	3410	-2583	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGTCTACCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	15205829	15198688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_15198769_15203295_15203473_15205723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025693	chr9	-	422	4	ISM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	3182	2596	3182	-2596	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAAGGCTCCCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15206057	15198701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15198769_15203295_15203473_15205727_15205830_15205981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025694	chr9	-	359	3	NNC	ENSMUSG00000031938.16	novel	753	6	NA	NA	3182	4401	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTTTGCTCATAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	15206057	15203295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_15203473_15205723_15205830_15205981
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025695	chr9	-	419	4	ISM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	3	7222	3	4369	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTGCCAGTGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	15209236	15203327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15203473_15205727_15205830_15205981_15206056_15209138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025696	chr9	+	798	4	ISM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	2354	0	2354	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTGCTTGATTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	15219913	15223094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_15220212_15221154_15221331_15221653_15221706_15222822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025697	chr9	-	173	1	NIC	ENSMUSG00000039977.17	novel	2918	11	NA	NA	14566	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGCACACATGTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	15523450	15523277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_15523300_15523400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025698	chr9	-	247	2	NIC	ENSMUSG00000039977.17	novel	244	2	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGCACACATGTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	15538017	15523277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_15523453_15537945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025699	chr9	-	240	2	ISM	ENSMUSG00000039977.17	ENSMUST00000115592.8	2918	11	13	52118	2	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGCACACATGTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	15538014	15523277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_15523453_15537949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025700	chr9	+	1477	1	Genic_Genomic	ENSMUSG00000043885.15	novel	NA	NA	NA	NA	32147	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTGTGTTTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	15653181	15654658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_15653200_15654700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025701	chr9	+	916	2	ISM	ENSMUSG00000001774.9	ENST00000457199.6	1618	9	17130	34	17130	-34	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATATCTGATTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	18223724	18224925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_18223789_18224073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025702	chr9	+	887	1	Genic_Genomic	ENSMUSG00000001774.9	novel	NA	NA	NA	NA	21260	3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAAGAGTCTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	18227854	18228741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_18227900_18228700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025703	chr9	+	1028	1	ISM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	26576	0	7480	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	19559999	19561027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_19560000_19561000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025704	chr9	-	801	2	NNC	ENSMUSG00000045519.16	novel	802	2	NA	NA	-1	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGACTGTAAGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	20263262	20258853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_20259526_20263133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025705	chr9	-	812	2	FSM	ENSMUSG00000045519.16	ENST00000306908.10	802	2	-9	-1	-9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGACTGTAAGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	20263270	20258853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_20259529_20263133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025706	chr9	+	801	2	Antisense	novelGene_ENSMUSG00000045519.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACAATCACACACGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20258853	20263259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_20259538_20263142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025707	chr9	-	676	1	ISM	ENSMUSG00000045519.16	ENSMUST00000068079.14	4751	7	36943	2423	3731	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTATGACTGTAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	20259530	20258854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20258900_20259500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025708	chr9	-	806	2	NNC	ENSMUSG00000045519.16	novel	802	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTATGACTGTAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	20263263	20258854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_20259531_20263133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025709	chr9	+	797	2	Antisense	novelGene_ENSMUSG00000045519.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCACACACGCTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	20258854	20263262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_20259536_20263146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025710	chr9	+	800	2	Antisense	novelGene_ENSMUSG00000045519.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATCACACACGCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	20258854	20263261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_20259536_20263142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025711	chr9	+	798	2	Antisense	novelGene_ENSMUSG00000045519.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATCACACACGCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	20258854	20263261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_20259538_20263146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025712	chr9	+	804	2	Antisense	novelGene_ENSMUSG00000045519.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATCACACACGCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	20258854	20263261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_20259540_20263142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025713	chr9	-	613	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTTGTCATATATTT	NA	NA	NA	NA	NA	NA	NA	NA	20296477	20263875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_20264138_20265359_20265546_20296312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025714	chr9	-	1026	3	ISM	ENSMUSG00000059475.14	ENSMUST00000166005.8	1653	6	5101	340	5101	-340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCATACACGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	20384352	20381630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20382545_20382994_20383078_20384323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025715	chr9	-	147	1	ISM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	22206	3997	22197	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTGTTGCCACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	20410507	20410360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20410400_20410500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025716	chr9	-	211	2	ISM	ENSMUSG00000060510.15	ENSMUST00000068296.8	2266	9	14539	6932	14539	-6932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGGCAAATTGTTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	20418165	20417292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20417362_20418023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025717	chr9	-	192	2	ISM	ENSMUSG00000060510.15	ENSMUST00000068296.8	2266	9	344	8974	344	-8974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAATGAAATAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20432360	20419334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20419482_20432315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025718	chr9	+	1036	2	ISM	ENSMUSG00000062470.11	ENSMUST00000136376.2	2349	3	7739	537	7552	-537	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGTGGAAAAAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	20526515	20528030	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_20527204_20527682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025719	chr9	-	650	3	FSM	ENSMUSG00000066892.15	ENST00000592067.1	645	3	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGCTACCTGCAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	20553617	20550054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_20550520_20553299_20553393_20553525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025720	chr9	-	466	1	FSM	ENSMUSG00000066892.15	ENSMUST00000140702.3	1555	1	114	975	114	2	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTCAGCTACCTGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	20550522	20550056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_20550100_20550500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025721	chr9	+	145	2	ISM	ENSMUSG00000084786.10	ENSMUST00000161882.8	489	5	-52	1510	-5	-1510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCACCGAGGGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	20556111	20556555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_20556190_20556488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025722	chr9	+	120	2	ISM	ENSMUSG00000084786.10	ENSMUST00000160124.2	501	4	150	1319	150	-1313	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCGCTGGAACAAGATCG	NA	NA	NA	NA	NA	NA	NA	NA	20556486	20556752	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_20556556_20556701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025723	chr9	+	285	3	ISM	ENSMUSG00000084786.10	ENSMUST00000160124.2	501	4	364	-2	364	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20556700	20558073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_20556786_20556917_20556956_20557911
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025724	chr9	+	238	2	NNC	ENSMUSG00000084786.10	novel	489	6	NA	NA	399	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20556735	20558073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_20556790_20557889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025725	chr9	+	136	1	ISM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	3511	0	1788	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTGTACCACAATGACC	NA	NA	NA	NA	NA	NA	NA	NA	20558124	20558260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_20558100_20558300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025726	chr9	+	3852	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	-1	-8	-1	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGGGATCCTGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	20563389	20577888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025727	chr9	+	3827	4	NNC	ENSMUSG00000032171.8	novel	3843	4	NA	NA	12	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTTGTCAGAGGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	20563402	20577881	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_20563494_20566657_20566877_20573593_20573705_20574475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025728	chr9	+	472	4	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	1603	973	1603	-973	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGGTGGCTATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	20801073	20802501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_20801238_20801934_20802012_20802200_20802309_20802378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025729	chr9	+	645	2	ISM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	3275	0	3275	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20802745	20803474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_20803044_20803127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025730	chr9	-	347	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	3646	-1	3646	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTGCTTATTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20806273	20805643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20805739_20805928_20806036_20806128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025731	chr9	-	319	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	3423	321	3423	-321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACGACCATCTTATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	20806496	20805965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20806036_20806128_20806266_20806384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025732	chr9	-	413	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	2604	508	2604	-508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGACTACTGGGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	20807315	20806152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20806266_20806384_20806493_20807123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025733	chr9	-	325	3	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	2401	820	2401	-820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACAGGGAAGTATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	20807518	20806464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20806493_20807123_20807314_20807411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025734	chr9	-	358	4	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	645	1567	645	-1567	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACAAGGACACACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	20809274	20807211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20807314_20807411_20807517_20809002_20809063_20809183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025735	chr9	-	280	4	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	199	3358	199	-3358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATTCTACCTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	20809720	20809002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20809063_20809183_20809273_20809379_20809464_20809673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025736	chr9	-	290	4	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	4	3545	4	-3545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGTGAGGTCGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	20809915	20809189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20809273_20809379_20809464_20809673_20809721_20809839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025737	chr9	-	966	1	ISM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	13455	0	13455	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTGTTTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20874622	20873656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20873700_20874600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025738	chr9	+	758	5	ISM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	4089	0	4089	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGTCACTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	20918122	20920135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025739	chr9	-	411	1	NIC	ENSMUSG00000111692.2	novel	1945	7	NA	NA	5167	-5119	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGACATGTTTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	20979225	20978814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_20978800_20979200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025740	chr9	-	499	4	ISM	ENSMUSG00000079677.3	ENST00000494368.5	451	5	200	-84	200	84	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACCCACAGTGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	20984617	20978975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025741	chr9	-	236	2	NNC	ENSMUSG00000079677.3	novel	451	5	NA	NA	5422	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACTGGACAGACCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	20979395	20979059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_20979222_20979321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025742	chr9	-	253	3	NNC	ENSMUSG00000079677.3	novel	812	5	NA	NA	200	-264	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGGCAGCCCCCGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	20984617	20979323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_20979414_20984370_20984478_20984561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025743	chr9	-	286	4	ISM	ENSMUSG00000079677.3	ENST00000494368.5	451	5	4	265	4	-265	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGGCAGCCCCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	20984813	20979324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20979414_20984370_20984478_20984559_20984615_20984778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025744	chr9	-	315	3	ISM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	4	5554	4	-5310	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTCATATGAAACTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	20984836	20984369	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20984478_20984559_20984615_20984684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025745	chr9	-	275	3	NNC	ENSMUSG00000079677.3	novel	812	5	NA	NA	-6	-5335	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCCACGGGGTGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	20984823	20984394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_20984478_20984561_20984615_20984684
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025746	chr9	-	290	2	ISM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	16357	1116	16357	-1116	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTTTTATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	20986947	20986569	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20986793_20986880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025747	chr9	-	280	3	ISM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	10956	5925	10956	-5925	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTCAGACCCTGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	20992348	20991378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_20991468_20992000_20992114_20992270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025748	chr9	-	731	3	ISM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	0	15454	0	2956	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGCCCTGGGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	21035437	21031798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21031991_21032680_21033055_21035272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025749	chr9	-	2063	1	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	14698	0	14698	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTCATGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	21046580	21044517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21044500_21046600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025750	chr9	-	2255	3	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	8870	4719	8870	-4719	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACATGCAAAAATGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21052408	21049236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21051260_21052053_21052126_21052248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025751	chr9	+	251	2	ISM	ENSMUSG00000032177.18	ENST00000293683.9	2294	15	6	19825	6	-19825	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACACCCTGCCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	21093062	21102815	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21093121_21102622
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025752	chr9	+	301	3	ISM	ENSMUSG00000032177.18	ENSMUST00000115458.9	2962	15	7224	19036	-5378	-18753	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGCTGAGCCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	21102622	21103887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21102815_21103690_21103728_21103815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025753	chr9	+	236	3	ISM	ENSMUSG00000032177.18	ENSMUST00000115458.9	2962	15	10472	12962	-2130	-12679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCCAACACGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	21105870	21109961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21105921_21106041_21106155_21109888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025754	chr9	+	406	3	ISM	ENSMUSG00000032177.18	ENSMUST00000115458.9	2962	15	10642	10209	-1960	-9926	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTAGGGAGCGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21106040	21112714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21106155_21109888_21109983_21112516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025755	chr9	+	465	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	4513	8074	4513	-7791	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGCCCGCCTCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21112513	21114849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21112714_21114493_21114593_21114683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025756	chr9	+	326	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	6531	7204	6531	-6921	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCTTTTCAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	21114531	21115719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21114593_21114683_21114849_21115619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025757	chr9	+	381	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	7618	6212	7618	-5929	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGATGCCCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	21115618	21116711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21115720_21116265_21116421_21116586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025758	chr9	+	364	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8364	5298	8364	-5015	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGCGGGTACAGGGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	21116364	21117625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21116421_21116586_21116710_21117440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025759	chr9	+	448	3	ISM	ENSMUSG00000032177.18	ENSMUST00000003395.10	2524	10	8669	709	8669	-426	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGGATTCATTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	21116669	21122214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21116710_21117440_21117624_21121989
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025760	chr9	+	300	1	ISM	ENSMUSG00000032177.18	ENSMUST00000039413.15	4653	15	45331	1904	14340	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTCCCTTCACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	21122340	21122640	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21122300_21122600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025761	chr9	+	1073	1	ISM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	11407	0	11407	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTCCTTGATGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	21187995	21189068	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21188000_21189100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025762	chr9	-	1428	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCAGATTTAGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21202604	21199700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_21200629_21202104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025763	chr9	-	564	5	ISM	ENSMUSG00000003309.15	ENST00000433173.1	959	7	2995	0	2995	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGGTGGCAGGCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	21214056	21207729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21207805_21209495_21209622_21210574_21210734_21213757_21213824_21213918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025764	chr9	-	550	5	ISM	ENSMUSG00000003309.15	ENST00000433173.1	959	7	421	1763	421	-1763	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCAGGGGTGGGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	21216630	21209492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21209622_21210574_21210734_21213757_21213824_21213918_21214062_21216577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025765	chr9	-	694	5	ISM	ENSMUSG00000003309.15	ENST00000433173.1	959	7	7	2902	7	-2902	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCAAGTATGTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	21217044	21210631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21210734_21213757_21213824_21213918_21214062_21216577_21216705_21216788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025766	chr9	+	137	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	3343	11971	3343	-11971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGACAAAAAATGCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	21253081	21253304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21253149_21253234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025767	chr9	+	133	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	3523	11722	3523	-11722	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCTCAGGTAATGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	21253261	21253553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21253320_21253478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025768	chr9	+	180	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	3740	11490	3740	-11490	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCCAGAACAATAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21253478	21253785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21253564_21253690
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025769	chr9	+	132	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	3992	11321	3992	-11321	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTATGGGGATCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	21253730	21253954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21253802_21253893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025770	chr9	+	116	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	4182	11155	4182	-11155	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCCAGAAAGAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	21253920	21254120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21253955_21254038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025771	chr9	+	148	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	4349	10943	4349	-10943	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATCATGTGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21254087	21254332	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21254163_21254259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025772	chr9	+	150	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	4521	10779	4521	-10779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTCTGGGTGATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	21254259	21254496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21254344_21254430
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025773	chr9	+	130	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	4736	9087	4736	-9087	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGGACCTTGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	21254474	21256188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21254544_21256127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025774	chr9	+	162	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	6417	8629	6417	-8629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATATTGATCGCCATCG	NA	NA	NA	NA	NA	NA	NA	NA	21256155	21256646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21256260_21256588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025775	chr9	+	142	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	6879	8430	6879	-8430	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGGGCCAGCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	21256617	21256845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21256689_21256774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025776	chr9	+	143	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	7466	7233	7466	-7233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGTGGCGAATCGACC	NA	NA	NA	NA	NA	NA	NA	NA	21257204	21258042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21257290_21257984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025777	chr9	+	151	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	8453	6850	8453	-6850	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGCCCTTCCTGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	21258191	21258425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21258248_21258330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025778	chr9	+	141	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	8612	6031	8612	-6031	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATCAAATTCCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	21258350	21259244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21258426_21259178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025779	chr9	+	1327	4	ISM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	10497	265	9882	-265	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAGAATCTGTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	21259620	21266056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21259695_21259833_21259923_21263762_21263848_21264977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025780	chr9	+	121	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	14047	920	14047	-920	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGGCATCCTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	21263785	21264355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21263848_21264296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025781	chr9	+	176	2	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	14724	354	14724	-354	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACCTGCCTGTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	21264462	21264921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21264541_21264823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025782	chr9	+	1161	1	ISM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	33170	0	15425	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	21265163	21266324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21265200_21266300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025783	chr9	+	555	3	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	3	12389	3	-9351	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGCCGAGAGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	21299821	21303739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21300050_21300601_21300780_21303590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025784	chr9	+	296	3	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	906	11029	906	-7991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATTTTGTTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	21300724	21305099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21300780_21303590_21303739_21305006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025785	chr9	+	299	3	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	5670	9373	5670	-6335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCGCAGGTATAGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	21305488	21306755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21305587_21306126_21306239_21306666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025786	chr9	+	275	3	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	6307	8749	6307	-5711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAATGCCCAAGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	21306125	21307379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21306239_21306666_21306765_21307315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025787	chr9	+	338	3	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	7584	7162	7584	-4124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGTATTCCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	21307402	21308966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21307428_21307512_21307624_21308764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025788	chr9	+	828	5	ISM	ENSMUSG00000032178.15	ENSMUST00000214758.2	3177	21	20341	5251	8944	-1955	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGGGACCTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	21308762	21311135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025789	chr9	+	310	2	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	9444	5580	9444	-2542	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAAGCAGGTGGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21309262	21310548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21309433_21310408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025790	chr9	+	478	3	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	11160	1432	11160	-1432	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTATGGCCATGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	21310978	21314696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21311138_21311255_21311310_21314431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025791	chr9	+	425	1	ISM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	33415	0	12847	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTCCGTACTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	21312665	21313090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21312700_21313100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025792	chr9	+	499	2	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	14613	640	14613	-640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCAAATGGGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	21314431	21315488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21314798_21315355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025793	chr9	+	661	2	ISM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	15537	-392	15537	-97	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTAGTGTTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	21315355	21316520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21315488_21315991
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025794	chr9	+	536	1	ISM	ENSMUSG00000032178.15	ENST00000449870.5	3616	20	36974	35	16305	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCAGGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	21316123	21316659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21316100_21316700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025795	chr9	+	673	3	ISM	ENSMUSG00000033335.18	ENSMUST00000172482.8	2613	21	79368	-152	79368	152	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGGGTGAGGAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	21415759	21417850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21415959_21416759_21417012_21417628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025796	chr9	+	671	1	ISM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	81524	12	81360	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTACTGGTGGCTACGTG	NA	NA	NA	NA	NA	NA	NA	NA	21417751	21418422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21417800_21418400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025797	chr9	-	1379	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCTGGTGACTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	21421548	21418849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025798	chr9	-	1370	4	NNC	ENSMUSG00000032180.12	novel	1378	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21421547	21418850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_21419688_21420226_21420411_21420549_21420648_21421296
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025799	chr9	-	1353	4	NNC	ENSMUSG00000032180.12	novel	1378	4	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21421531	21418850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_21419688_21420226_21420411_21420557_21420648_21421289
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025800	chr9	+	804	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	54	2312	54	-2312	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGCTGCACTCAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	21504071	21504954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_21504367_21504445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025801	chr9	+	548	1	Genic_Genomic	ENSMUSG00000048429.11	novel	NA	NA	NA	NA	2702	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTTTCTTGCAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	21506719	21507267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_21506700_21507300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025802	chr9	+	290	2	ISM	ENSMUSG00000032187.17	ENST00000645460.1	5396	34	82	70318	82	-70318	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGATGCACAAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	21527641	21544335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21527697_21544100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025803	chr9	+	879	4	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	9	67075	9	-67075	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTCTTTTCTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	21544109	21547578	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21544351_21546045_21546179_21546831_21547237_21547478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025804	chr9	+	296	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	3436	65824	3436	-65824	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGAGCACCCTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21547536	21548829	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21547578_21548574
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025805	chr9	+	335	3	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	4700	63965	4700	-63965	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCCTTGCAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	21548800	21550688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21548834_21550009_21550137_21550513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025806	chr9	+	339	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	6423	62271	6423	-62271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATACTAGCTTTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21550523	21552382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21550688_21552207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025807	chr9	+	343	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	8104	60767	8104	-60767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCGCTGGGCCTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	21552204	21553886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21552382_21553720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025808	chr9	+	303	3	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	14544	47619	14544	-47619	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATTGAGTAAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	21558644	21567034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21558778_21558913_21558972_21566922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025809	chr9	+	303	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	26021	42498	26021	-42498	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCCTCTCTCGTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	21570121	21572155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21570273_21572003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025810	chr9	+	323	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	40374	28126	40374	-28126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGCATTGGTAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	21584474	21586527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21584633_21586362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025811	chr9	+	378	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	42270	25686	42270	-25686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGTGAGCATGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	21586370	21588967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21586527_21588745
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025812	chr9	+	301	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	45509	24208	45509	-24208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCTGAGAGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21589609	21590445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21589690_21590224
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025813	chr9	+	395	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	46171	17113	46171	-17113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGGATGCTGTGATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	21590271	21597540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21590444_21597317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025814	chr9	+	311	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	53253	3462	53253	-3462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGATCAAGGTGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	21597353	21611191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21597572_21611098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025815	chr9	+	339	2	ISM	ENSMUSG00000032187.17	ENST00000444061.8	5259	33	68309	200	68309	-200	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAACTGTCTAGAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	21612409	21614453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21612527_21614231
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025816	chr9	+	285	1	ISM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	86904	860	70268	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAAGCCACCACTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	21614368	21614653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21614400_21614700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025817	chr9	+	1393	2	ISM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	23518	539	23518	-539	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGGCACATGTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	21658445	21660672	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21658603_21659436
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025818	chr9	+	1394	1	ISM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	25043	0	24894	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21659821	21661215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21659800_21661200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025819	chr9	-	1045	3	ISM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	2909	-9	2888	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGCAGCATGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	21668690	21666728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21667592_21668412_21668490_21668585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025820	chr9	-	867	1	Genic_Genomic	ENSMUSG00000074476.7	novel	NA	NA	NA	NA	3982	8	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGCAGCATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	21667596	21666729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_21666700_21667600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025821	chr9	-	2671	1	Genic_Genomic	ENSMUSG00000019066.14	novel	NA	NA	NA	NA	7957	1	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTATATTGCTTAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	21821456	21818785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_21818800_21821500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025822	chr9	-	3103	4	ISM	ENSMUSG00000019066.14	ENSMUST00000122211.8	3886	5	2214	524	2192	-524	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGGACGGGAGCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	21827221	21819329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025823	chr9	-	785	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21838758	21832304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025824	chr9	-	328	3	ISM	ENSMUSG00000040883.19	ENSMUST00000238930.2	862	4	139	5036	66	-5020	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTGGCACCACAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	21838692	21837341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21837451_21837544_21837654_21838582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025825	chr9	+	1298	1	ISM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	10574	0	9154	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTGGCCTTCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21858902	21860200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21858900_21860200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025826	chr9	-	780	1	NIC	ENSMUSG00000006235.7	novel	1761	8	NA	NA	3830	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTTATTTGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	21870972	21870192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_21870200_21871000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025827	chr9	+	110	2	ISM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	63	8621	63	-8621	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACAAGCCCTTGTACATC	NA	NA	NA	NA	NA	NA	NA	NA	21915024	21915838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_21915090_21915793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025828	chr9	-	174	1	ISM	ENSMUSG00000003410.9	ENST00000359227.8	4741	8	36845	0	36832	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCAGGTGCTCTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21926474	21926300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21926300_21926500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025829	chr9	-	245	2	ISM	ENSMUSG00000003410.9	ENST00000359227.8	4741	8	34429	2059	34416	-2059	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTACTTCCTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	21928890	21928359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21928450_21928735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025830	chr9	-	189	2	ISM	ENSMUSG00000003410.9	ENSMUST00000003501.9	5014	7	27297	3701	27297	-3701	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGCTTTTCGGACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	21936009	21930001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21930151_21935969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025831	chr9	-	183	2	ISM	ENSMUSG00000003410.9	ENSMUST00000215901.2	3037	6	25699	1871	25686	-1871	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGAGGTAACAGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	21937620	21935977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21936009_21937468
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025832	chr9	-	182	2	ISM	ENSMUSG00000003410.9	ENSMUST00000215901.2	3037	6	15632	3749	15619	-3749	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGTACGGCCGAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	21947687	21937855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21937958_21947607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025833	chr9	-	181	2	ISM	ENSMUSG00000003410.9	ENSMUST00000003501.9	5014	7	369	21727	369	-13921	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAGAACATGACACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	21962937	21948027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21948157_21962885
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025834	chr9	-	451	2	ISM	ENSMUSG00000066839.13	ENST00000252440.11	829	5	3400	-164	3400	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	21984393	21983541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21983877_21984277
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025835	chr9	-	927	5	FSM	ENSMUSG00000066839.13	ENST00000252440.11	829	5	-98	0	-98	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCCCTCCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	21987891	21983705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_21983877_21984277_21984384_21984978_21985037_21985886_21986111_21987523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025836	chr9	-	776	4	ISM	ENSMUSG00000066839.13	ENST00000592312.5	1042	5	1679	0	1679	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTCCACGGGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	21986114	21983749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21983877_21984277_21984384_21984721_21985037_21985886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025837	chr9	-	803	3	ISM	ENSMUSG00000066839.13	ENST00000592312.5	1042	5	6	972	6	-972	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTACTGGCCAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	21987787	21984721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21985037_21985886_21986111_21987523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025838	chr9	-	560	3	ISM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	1281	4082	1256	-3874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTTCCGGCCCCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	21995442	21987623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_21987942_21989443_21989562_21995318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025839	chr9	+	439	1	FSM	ENSMUSG00000111446.2	ENSMUST00000214545.2	260	1	-7	-172	-7	172	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCACCCACTAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	22003801	22004240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_22003800_22004200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025840	chr9	+	1941	4	NNC	ENSMUSG00000001349.6	novel	2381	7	NA	NA	6219	13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATCCCAGGGCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	22016782	22020939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_22016804_22016965_22017077_22019046_22019198_22019281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025841	chr9	-	1036	2	FSM	ENSMUSG00000013822.8	ENSMUST00000166335.2	1053	2	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCGCTGTACTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	22025448	22024284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_22024976_22025103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025842	chr9	-	511	1	ISM	ENSMUSG00000013822.8	ENSMUST00000166335.2	1053	2	669	1	669	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCGCTGTACTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	22024796	22024285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_22024300_22024800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025843	chr9	-	526	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	-2	364	-2	-46	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCCTGAGCCTCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	22028470	22024650	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_22024976_22025103_22025240_22028405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025844	chr9	+	667	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	2	26	2	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACGACCAGCCTTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	22068143	22069628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_22068210_22069027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025845	chr9	+	629	1	Genic_Genomic	ENSMUSG00000010607.9	novel	NA	NA	NA	NA	785	1	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCTAAGATTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	22069026	22069655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_22069000_22069700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025846	chr9	-	609	1	FSM	ENSMUSG00000061167.10	ENSMUST00000088480.4	615	1	-1	7	-1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTAATACACGTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	22097518	22096909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_22096900_22097500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025847	chr9	-	2462	1	ISM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	28429	0	28429	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTGTAAATTAAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	22190505	22188043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_22188000_22190500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025848	chr9	-	2414	2	NNC	ENSMUSG00000066829.8	novel	822	7	NA	NA	27106	-199	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGGAATGGTCTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	22191828	22188242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_22190573_22191744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025849	chr9	-	749	1	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	56428	0	56428	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	22244056	22243307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_22243300_22244100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025850	chr9	-	755	3	ISM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	51228	609	51228	-609	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTCAGAGCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	22249256	22243916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_22244470_22245297_22245471_22249227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025851	chr9	+	1408	6	FSM	ENSMUSG00000036411.11	ENST00000317020.10	1407	6	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGCTGAAAAACCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	22323004	22355502	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_22323046_22335408_22336104_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025852	chr9	+	1145	3	ISM	ENSMUSG00000036411.11	ENST00000338533.9	1379	5	2	8805	2	-8805	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTCCCTCCATGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	22335398	22346697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_22336104_22342971_22343105_22346390
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025853	chr9	-	831	4	ISM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	10843	0	10843	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTCATTATTAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	22368801	22359606	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025854	chr9	+	1331	3	ISM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	182923	198	182923	-198	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGACCATTTGCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	23317790	23396009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_23318128_23384741_23384873_23395146
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025855	chr9	+	1204	1	ISM	ENSMUSG00000031963.9	ENSMUST00000071982.7	3791	15	260921	0	260425	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAACAGTTTTCAATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	23395292	23396496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_23395300_23396500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025856	chr9	+	186	1	NIC	ENSMUSG00000043659.12	novel	1335	10	NA	NA	215133	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTATGTTCTTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	24224463	24224649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_24224500_24224600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025857	chr9	-	662	5	ISM	ENSMUSG00000043067.16	ENST00000426647.2	909	9	9593	0	9593	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACAGTGACTGCACGT	NA	NA	NA	NA	NA	NA	NA	NA	24336143	24325574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_24325720_24332376_24332497_24333555_24333656_24334308_24334484_24336021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025858	chr9	-	160	1	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAACAGTGCCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	25012561	25012401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr9_-_25012400_25012600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025859	chr9	+	286	3	ISM	ENSMUSG00000001833.18	ENST00000672279.1	543	5	12776	1590	-12139	-1590	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATGCAGTGGATAATAG	NA	NA	NA	NA	NA	NA	NA	NA	25176688	25198038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_25176793_25188839_25188947_25197963
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025860	chr9	+	300	2	FSM	ENSMUSG00000001833.18	ENST00000437076.1	290	2	-2	-8	-2	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTTTCTCCAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25188825	25212842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_25188955_25212671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025861	chr9	+	277	2	NIC	ENSMUSG00000001833.18	novel	290	2	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTATATAACTTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	25188832	25212834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_25188947_25212671
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025862	chr9	+	356	3	ISM	ENSMUSG00000001833.18	ENST00000672279.1	543	5	24928	0	-1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTACATCGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25188840	25199628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_25188947_25197963_25198065_25199479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025863	chr9	+	231	2	FSM	ENSMUSG00000001833.18	ENST00000613964.2	225	2	0	-6	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTATATAACTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	25188841	25212833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_25188947_25212707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025864	chr9	+	217	2	NNC	ENSMUSG00000001833.18	novel	225	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAAGTACGTATATAACT	NA	NA	NA	NA	NA	NA	NA	NA	25188843	25212827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_25188941_25212707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025865	chr9	+	150	1	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	10636	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTACATCGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25199478	25199628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_25199500_25199600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025866	chr9	+	1227	5	ISM	ENSMUSG00000001833.18	ENSMUST00000165594.4	2516	14	47059	263	21963	-263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTAACTCCCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	25210805	25219599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025867	chr9	+	169	1	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	23825	2	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATATAACTTTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	25212667	25212836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_25212700_25212800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025868	chr9	+	1061	1	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	29964	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCTTGTATATTCT	NA	NA	NA	NA	NA	NA	NA	NA	25218806	25219867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_25218800_25219900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025869	chr9	-	824	1	Genic_Genomic	ENSMUSG00000031988.11	novel	NA	NA	NA	NA	21472	1	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTGGTCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	26919889	26919065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_26919100_26919900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025870	chr9	-	886	2	ISM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	19557	1526	19557	-1526	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTATACAGGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	26921804	26920592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_26921334_26921659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025871	chr9	-	874	1	Genic_Genomic	ENSMUSG00000031990.16	novel	NA	NA	NA	NA	57137	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTGTATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27009552	27008678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_27008700_27009600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025872	chr9	-	1019	3	ISM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	56419	184	56419	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGAAGGCTTGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	27010270	27008863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_27009698_27010007_27010063_27010140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025873	chr9	+	138	2	ISM	ENSMUSG00000034275.19	ENSMUST00000115247.8	2857	15	245	20639	228	-20639	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCCCCACCCTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	27210768	27220792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_27210814_27220699
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025874	chr9	+	167	2	ISM	ENSMUSG00000034275.19	ENSMUST00000115247.8	2857	15	10288	18488	10271	-18488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCATGCTGGACCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	27220811	27222943	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_27220898_27222862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025875	chr9	+	133	2	ISM	ENSMUSG00000034275.19	ENSMUST00000115247.8	2857	15	18239	12234	18222	-12234	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACAACCCATCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	27228762	27229197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_27228803_27229104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025876	chr9	+	146	2	ISM	ENSMUSG00000034275.19	ENSMUST00000115247.8	2857	15	18579	10904	18562	-10904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACATCACCGTCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	27229102	27230527	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_27229223_27230501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025877	chr9	+	142	2	ISM	ENSMUSG00000034275.19	ENSMUST00000115247.8	2857	15	23454	7226	23437	-7226	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCTGTGCAGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	27233977	27234205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_27234054_27234139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025878	chr9	+	152	2	ISM	ENSMUSG00000034275.19	ENSMUST00000133213.3	4239	18	30318	3039	30301	1589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGCAGCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	27240841	27243020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_27240920_27242946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025879	chr9	-	124	1	ISM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	62107	0	62079	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	31060976	31060852	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_31060900_31061000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025880	chr9	-	253	2	ISM	ENSMUSG00000031996.18	ENST00000650012.1	3633	18	44029	15029	44029	-15029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCTAAGGAACAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	31079026	31075886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_31075970_31078856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025881	chr9	-	179	2	ISM	ENSMUSG00000031996.18	ENST00000650012.1	3633	18	34621	22427	34621	-22427	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCGGATGGAGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	31088434	31083284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_31083343_31088313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025882	chr9	-	181	2	ISM	ENSMUSG00000031996.18	ENST00000650012.1	3633	18	33793	27461	33793	-27461	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTAAGTGCTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31089262	31088318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_31088438_31089200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025883	chr9	+	2703	1	ISM	ENSMUSG00000032035.17	ENSMUST00000034534.13	5080	8	59096	0	58734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGGCTCTGGCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	32666413	32669116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_32666400_32669100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025884	chr9	+	984	2	FSM	ENSMUSG00000099148.2	ENSMUST00000183423.2	1017	2	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGCTGTTATTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	32725062	32745400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_32725156_32744509
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025885	chr9	+	892	1	NIC	ENSMUSG00000099148.2	novel	1017	2	NA	NA	19479	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTGCTGTTATTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	32744508	32745400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_32744500_32745400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025886	chr9	+	368	1	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	573	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATAGGATTCAATCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	33641109	33641477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr9_+_33641100_33641500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025887	chr9	-	1108	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	162	4	160	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGATGGTGTAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	35087195	35035707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025888	chr9	+	652	4	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	3022	1380	3022	-1380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTTTGGGCCCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	35125472	35126930	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_35125570_35125855_35126029_35126113_35126328_35126762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025889	chr9	+	917	3	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	4311	424	4311	-424	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAACTCTACACCCGATT	NA	NA	NA	NA	NA	NA	NA	NA	35126761	35127886	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_35126927_35127010_35127110_35127233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025890	chr9	+	664	1	ISM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	5196	0	5196	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	35127646	35128310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_35127600_35128300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025891	chr9	-	386	1	ISM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	50377	53	50374	2	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAATTTCTTTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	35128699	35128313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_35128300_35128700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025892	chr9	-	634	3	ISM	ENSMUSG00000050471.18	ENSMUST00000121564.8	1962	10	46111	441	46111	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATGTGATGACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35132962	35128756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_35129044_35129224_35129285_35132675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025893	chr9	-	643	3	ISM	ENSMUSG00000050471.18	ENSMUST00000121564.8	1962	10	40386	4360	40386	-4360	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAAGGCCAAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	35138687	35132675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_35132962_35134909_35135039_35138459
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025894	chr9	-	351	2	NNC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	44041	-4416	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCCAGAATATTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	35135032	35132731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_35132960_35134909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025895	chr9	-	490	3	ISM	ENSMUSG00000050471.18	ENSMUST00000121564.8	1962	10	32312	6696	32312	-6696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAAGTGTGCTACACAT	NA	NA	NA	NA	NA	NA	NA	NA	35146761	35135011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_35135039_35138459_35138688_35146526
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025896	chr9	-	347	2	ISM	ENSMUSG00000050471.18	ENSMUST00000121564.8	1962	10	23070	18211	23070	-18211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTAGTCTGCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35156003	35146526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_35146780_35155909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025897	chr9	-	1288	1	Genic_Genomic	ENSMUSG00000050555.10	novel	NA	NA	NA	NA	8292	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGAACCTTGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	35473402	35472114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_35472100_35473400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025898	chr9	-	1330	2	ISM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	6218	73	6218	-73	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	35475476	35472188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_35473401_35475358
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025899	chr9	-	1727	1	Genic_Genomic	ENSMUSG00000032113.17	novel	NA	NA	NA	NA	15656	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAGCTATATTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	36621503	36619776	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_36619800_36621500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025900	chr9	-	2056	4	ISM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	12503	316	11992	-316	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATTGATACTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36625167	36620093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025901	chr9	-	753	5	ISM	ENSMUSG00000032113.17	ENST00000427383.6	1490	12	12147	12	11327	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCGATTTGTAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36625832	36621497	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025902	chr9	-	693	6	ISM	ENSMUSG00000032113.17	ENST00000427383.6	1490	12	8246	1883	7426	-1883	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATACTGGTTGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	36629733	36623368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025903	chr9	-	673	5	ISM	ENSMUSG00000032113.17	ENSMUST00000173963.9	1509	11	6169	3532	6169	-3499	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAGGTAAGGAACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	36630990	36624984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025904	chr9	-	657	1	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	37679	0	37609	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTGACTGCTTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	36641296	36640639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_36640600_36641300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025905	chr9	-	934	3	ISM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	32137	2991	32067	-2991	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTTGGCTTTATAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	36646838	36643630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_36644259_36645610_36645727_36646648
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025906	chr9	-	684	1	NIC	ENSMUSG00000062762.18	novel	2104	11	NA	NA	13076	9	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGGGGGAAATGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	36691567	36690883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_36690900_36691600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025907	chr9	-	956	4	ISM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	7719	0	7719	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAAGGAGTGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	36696924	36690892	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_36691566_36693636_36693712_36695763_36695876_36696828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025908	chr9	-	681	1	ISM	ENSMUSG00000035934.17	ENSMUST00000177218.8	3393	11	191647	0	191647	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATGCACAGTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	36802958	36802277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_36802300_36803000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025909	chr9	+	750	4	FSM	ENSMUSG00000032121.10	ENST00000528724.5	746	4	-4	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTTTGGGCTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	37129556	37134223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_37129673_37130284_37130367_37130497_37130601_37133774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025910	chr9	+	197	3	FSM	ENSMUSG00000032121.10	ENST00000529609.5	291	3	1	93	1	-93	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGCTTTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	37129561	37133804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_37129673_37130544_37130601_37133774
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025911	chr9	+	127	1	NIC	ENSMUSG00000032121.10	novel	2619	4	NA	NA	4212	2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGCTGAGCATAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	37133772	37133899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_37133800_37133900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025912	chr9	+	455	1	FSM	ENSMUSG00000090136.5	ENSMUST00000160052.2	444	1	-2	-9	-2	9	mono-exon	FALSE	NA	NA	NA	NA	NA	627	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGCTCAGTCGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	37164215	37164670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_37164200_37164700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025913	chr9	+	2481	4	FSM	ENSMUSG00000042138.10	ENST00000674284.1	2485	4	5	-1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGGTGTGCTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	37400301	37435477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025914	chr9	+	1610	1	ISM	ENSMUSG00000042138.10	ENSMUST00000211060.2	2165	4	33697	0	33695	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGAGTGATCCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	37434311	37435921	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_37434300_37435900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025915	chr9	-	438	1	ISM	ENSMUSG00000053310.12	ENSMUST00000065668.12	1453	4	7975	0	1245	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGGTGCAGGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	37456225	37455787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_37455800_37456200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025916	chr9	-	488	2	FSM	ENSMUSG00000053310.12	ENST00000412681.2	1090	2	30	572	30	-572	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCACGCCCACCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	37457440	37456361	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_37456653_37457243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025917	chr9	-	305	2	FSM	ENSMUSG00000053310.12	ENST00000284292.11	1083	2	131	647	131	-646	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAACGTGGTCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	37457339	37456435	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_37456645_37457243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025918	chr9	-	357	3	ISM	ENSMUSG00000001948.11	ENSMUST00000002013.11	696	5	63	4328	63	-4328	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATAGTCTTATGAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	37524955	37518913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_37518984_37523131_37523315_37524851
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025919	chr9	-	1243	5	ISM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	4549	-1	4549	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATTCTGACCCTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	37564059	37560057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025920	chr9	+	1155	1	Genic_Genomic	ENSMUSG00000023186.15	novel	NA	NA	NA	NA	23912	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAACTTTGTTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	38653479	38654634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_38653500_38654600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025921	chr9	+	473	3	ISM	ENSMUSG00000049281.17	ENST00000299333.8	1506	7	73	12050	-10	-12050	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCATGAAGAGGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	40180590	40188448	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40180899_40181263_40181344_40188363
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025922	chr9	+	472	3	ISM	ENSMUSG00000049281.17	ENST00000392770.6	1788	6	661	9602	279	-9602	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTGAGGCCTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	40181261	40190896	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40181344_40188363_40188528_40190670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025923	chr9	+	1039	5	FSM	ENSMUSG00000049281.17	ENST00000657123.1	1046	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCCTGCCTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	40188369	40200498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_40188528_40190670_40190897_40193719_40193859_40199669_40199755_40200067
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025924	chr9	+	317	1	ISM	ENSMUSG00000049281.17	ENSMUST00000049941.12	4150	7	19669	2416	11819	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCCTGCCTCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	40200181	40200498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40200200_40200500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025925	chr9	+	1361	1	ISM	ENSMUSG00000097205.2	ENSMUST00000181617.2	1528	2	1105	0	1105	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	40443555	40444916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40443600_40444900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025926	chr9	+	1006	3	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	88350	2273	88350	-2273	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATAATATACCTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	40685657	40694342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40685782_40692408_40692551_40693602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025927	chr9	+	772	1	ISM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	98536	0	98536	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTGTAAAATAGTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	40695843	40696615	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40695800_40696600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025928	chr9	+	787	3	ISM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	1	2570	1	-2488	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3988	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAACAGGTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	40712280	40713926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40712645_40713213_40713424_40713713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025929	chr9	+	356	2	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	-151	-3029	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAGGTTGCAATGAACC	NA	NA	NA	NA	NA	NA	NA	NA	40712446	40713385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_40712645_40713227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025930	chr9	+	352	2	NNC	ENSMUSG00000015656.18	novel	1938	8	NA	NA	8	-2541	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCTGACAAAGATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	40713224	40713873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_40713417_40713713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025931	chr9	+	558	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	16	2219	16	-2219	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAATCAAGTACAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	40713232	40714195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40713424_40713713_40713920_40714034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025932	chr9	+	745	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	489	1767	489	-1767	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2422	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTGTAGAGAAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	40713705	40714647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40713920_40714034_40714188_40714269
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025933	chr9	+	215	2	ISM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	1195	2317	576	-2235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGGTAGGCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	40713792	40714179	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40713920_40714091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025934	chr9	+	830	3	ISM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	1752	885	1133	-803	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2093	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGAGCACAGGAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	40714349	40715611	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40714826_40715035_40715239_40715460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025935	chr9	+	732	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	1278	750	1278	-750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGACCTGCTGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	40714494	40715664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40714820_40715035_40715239_40715460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025936	chr9	+	608	3	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	1294	-856	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTTACTTTTGACATCG	NA	NA	NA	NA	NA	NA	NA	NA	40714510	40715558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_40714826_40715043_40715239_40715460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025937	chr9	+	360	2	NNC	ENSMUSG00000015656.18	novel	1938	8	NA	NA	1367	-1247	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCATCCCCACCAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	40714583	40715167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_40714820_40715043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025938	chr9	+	353	3	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	1523	-880	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCCCGTGGGGTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	40714739	40715534	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_40714826_40715035_40715239_40715470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025939	chr9	+	350	3	NNC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	1528	-874	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGGGGTCCCTCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	40714744	40715540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_40714826_40715035_40715225_40715460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025940	chr9	+	613	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	1843	421	1843	-421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1362	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTTGCCAATAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	40715059	40715993	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40715239_40715460_40715660_40715758
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025941	chr9	+	648	3	ISM	ENSMUSG00000015656.18	ENST00000419827.2	1938	8	2304	-89	2304	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1488	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGACTGAGTTAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	40715520	40716503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_40715660_40715758_40715992_40716227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025942	chr9	+	426	2	NNC	ENSMUSG00000015656.18	novel	1938	8	NA	NA	2587	-24	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACTATTTAAATTGGC	NA	NA	NA	NA	NA	NA	NA	NA	40715803	40716472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_40715992_40716234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025943	chr9	+	378	2	NNC	ENSMUSG00000015656.18	novel	1938	8	NA	NA	2637	-26	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACTATTTAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	40715853	40716470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_40715996_40716234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025944	chr9	-	2844	1	ISM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	144121	0	65565	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGTCCTGAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40925237	40922393	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_40922400_40925200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025945	chr9	-	2910	2	ISM	ENSMUSG00000032020.16	ENSMUST00000151485.8	2231	14	62854	-2539	62854	-1084	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTGTAGAAAACTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	40927948	40923477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_40926333_40927893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025946	chr9	+	309	2	FSM	ENSMUSG00000074415.15	ENST00000648084.1	308	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGATGATGACTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	41238555	41303596	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_41238583_41303314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025947	chr9	+	286	1	Genic_Genomic	ENSMUSG00000074415.15	novel	NA	NA	NA	NA	15458	4	mono-exon	FALSE	NA	NA	NA	NA	NA	962	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGATGACTTTCATAGGT	NA	NA	NA	NA	NA	NA	NA	NA	41303314	41303600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_41303300_41303600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025948	chr9	+	304	2	NNC	ENSMUSG00000074415.15	novel	308	2	NA	NA	15460	16664	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAGCAAATTATAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	41303316	41360039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_41303599_41360017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025949	chr9	+	243	2	NNC	ENSMUSG00000074415.15	novel	308	2	NA	NA	15505	16663	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAGCAAATTATAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	41303361	41360038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_41303584_41360017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025950	chr9	+	1201	3	FSM	ENSMUSG00000074415.15	ENST00000530072.6	1197	3	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGCCACCCACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	41491270	41501653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_41491495_41491880_41492699_41501494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025951	chr9	+	667	1	ISM	ENSMUSG00000074415.15	ENSMUST00000233321.2	2097	3	115816	581	9284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGCATATTAAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	41501940	41502607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_41501900_41502600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025952	chr9	-	1745	1	Genic_Genomic	ENSMUSG00000032018.15	novel	NA	NA	NA	NA	10864	3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGTGTGGACCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	42164632	42162887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_42162900_42164600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025953	chr9	-	1755	2	ISM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	7992	-588	7992	588	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCTATTATCCACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	42167504	42165440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_42167094_42167402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025954	chr9	-	855	1	ISM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	8669	3138	8613	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCTCTTCCATAATTC	NA	NA	NA	NA	NA	NA	NA	NA	42166883	42166028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_42166000_42166900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025955	chr9	-	317	1	ISM	ENSMUSG00000059495.15	ENSMUST00000165665.9	10752	41	138373	3455	137872	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGGCAGCCTCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	42878909	42878592	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_42878600_42878900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025956	chr9	-	317	2	NNC	ENSMUSG00000059495.15	novel	6788	40	NA	NA	133371	-3817	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCACTGGCGAGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	42883410	42882409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_42882603_42883286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025957	chr9	-	335	2	ISM	ENSMUSG00000059495.15	ENST00000356641.7	6788	40	130744	5071	130692	-5071	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGTACAGGCAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	42886089	42883663	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_42883762_42885852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025958	chr9	-	322	4	ISM	ENSMUSG00000059495.15	ENST00000356641.7	6788	40	104029	32678	103977	-32678	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATCGGCTTCCTTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	42912804	42911270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_42911359_42911652_42911686_42912264_42912403_42912741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025959	chr9	-	264	2	ISM	ENSMUSG00000059495.15	ENST00000356641.7	6788	40	87363	48606	87311	-48606	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTTTAATCTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	42929470	42927198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_42927340_42929347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025960	chr9	-	308	3	ISM	ENSMUSG00000059495.15	ENST00000356641.7	6788	40	84824	50754	84772	-50754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGCATTATTGAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	42932009	42929346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_42929468_42929630_42929709_42931900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025961	chr9	-	2542	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	-1	-15	-1	15	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATCTTAGAACCAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	43151209	43132516	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025962	chr9	-	268	1	NIC	ENSMUSG00000032014.7	novel	2526	4	NA	NA	16700	1	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGGAGACAGAGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	43134138	43133870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_43133900_43134100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025963	chr9	-	326	3	ISM	ENSMUSG00000032014.7	ENST00000531220.1	733	4	57	1407	57	-1407	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCCCATCTCCACAACGT	NA	NA	NA	NA	NA	NA	NA	NA	43150781	43135278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_43135375_43136172_43136225_43150603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025964	chr9	-	394	2	FSM	ENSMUSG00000111415.2	ENST00000530918.2	812	2	418	0	418	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTCCCCCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	43987102	43978384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_43978502_43986825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025965	chr9	-	127	1	ISM	ENSMUSG00000111409.2	ENSMUST00000185479.2	2964	2	46286	761	46286	-761	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCTCTCCCCCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	43978511	43978384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_43978400_43978500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025966	chr9	+	1146	7	ISM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	733	0	717	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACCTATGTGGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	44013783	44017801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44016448_44016580_44016683_44016813_44017539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025967	chr9	+	964	2	ISM	ENSMUSG00000034739.18	ENST00000619721.6	3995	16	4572	1853	4528	827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGCTAGGAGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	44017594	44018628	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44017820_44017889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025968	chr9	+	1884	3	FSM	ENSMUSG00000079592.10	ENSMUST00000114818.9	1337	3	-600	53	-571	-53	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCAGGGCAGGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44017970	44020428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_44018759_44019009_44019269_44019591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025969	chr9	+	894	1	NIC	ENSMUSG00000034739.18	novel	4316	14	NA	NA	6524	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTCTCCCTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44019590	44020484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_44019600_44020500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025970	chr9	+	2143	2	FSM	ENSMUSG00000097467.3	ENSMUST00000181106.3	2151	2	9	-1	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTTTTTTCTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	44024228	44033258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_44024533_44031419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025971	chr9	-	953	1	ISM	ENSMUSG00000032131.17	ENST00000619701.5	3572	15	14088	0	13404	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGGTGTGAATGTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	44185437	44184484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44184500_44185400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025972	chr9	-	1053	2	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	12398	748	12398	-748	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAGGACCTGGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	44186443	44185232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44186155_44186312
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025973	chr9	-	1040	3	ISM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	12138	906	12138	-906	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTTGGGACAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	44186703	44185390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44186155_44186312_44186432_44186546
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025974	chr9	+	989	2	ISM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	5982	0	5866	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTGCTCCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44244123	44245197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44244269_44244353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025975	chr9	+	850	1	Genic_Genomic	ENSMUSG00000032123.6	novel	NA	NA	NA	NA	6092	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGCTCCATTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44244349	44245199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_44244300_44245200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025976	chr9	+	439	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	945	0	945	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTAATGTTGAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	44246935	44247374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_44246900_44247400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025977	chr9	-	706	5	ISM	ENSMUSG00000032126.17	ENST00000544387.5	1140	11	3693	0	3690	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGTGGTTCTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44249306	44247711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248948_44248988_44249211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025978	chr9	-	821	1	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	13101	0	13101	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTCTGGATAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	44259866	44259045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44259000_44259900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025979	chr9	-	1132	3	ISM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	8900	101	8900	-101	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCATAACACTTGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	44264067	44259146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44259882_44260199_44260423_44263893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025980	chr9	-	161	1	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGAGCAAGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	44285971	44285810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chr9_-_44285800_44286000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025981	chr9	+	320	2	ISM	ENSMUSG00000032115.15	ENST00000621959.4	3063	24	8533	1819	8533	-1630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGAGATGCTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	44300341	44300769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44300420_44300527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025982	chr9	+	296	2	ISM	ENSMUSG00000032115.15	ENST00000621959.4	3063	24	8717	1662	8717	-1473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGGGACCTGGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	44300525	44300926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44300769_44300873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025983	chr9	+	245	1	ISM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	5618	7	4243	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACAGTCAGTGGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	44314013	44314258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44314000_44314300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025984	chr9	-	302	1	ISM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	3540	0	3246	0	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTCTCCTAACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44315357	44315055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44315100_44315400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025985	chr9	-	981	3	ISM	ENSMUSG00000032112.11	ENSMUST00000217163.2	1185	4	353	-1	327	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTCTCTCCTAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	44318276	44315056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44315758_44316539_44316644_44318100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025986	chr9	-	493	4	ISM	ENSMUSG00000032112.11	ENST00000434101.6	758	5	327	86	327	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTGTATATATTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	44318276	44315147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44315396_44315630_44315758_44316539_44316589_44318207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025987	chr9	-	248	3	ISM	ENSMUSG00000032112.11	ENST00000434101.6	758	5	1959	318	1959	-318	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACCTGAAGCTAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	44316644	44315379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44315396_44315630_44315758_44316539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025988	chr9	-	389	2	ISM	ENSMUSG00000032112.11	ENSMUST00000217163.2	1185	4	-7	3042	-7	-3038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCCCTACCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44318636	44318099	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44318276_44318423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025989	chr9	+	1283	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACATTTATTCATACC	NA	NA	NA	NA	NA	NA	NA	NA	44318433	44321725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025990	chr9	+	874	4	NNC	ENSMUSG00000009927.10	novel	577	4	NA	NA	97	-161	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGGCGAAGATGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	44318532	44321325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_44319055_44319284_44319381_44319985_44320167_44321250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025991	chr9	+	231	2	ISM	ENSMUSG00000009927.10	ENSMUST00000216076.2	393	4	2	1337	0	-1334	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCTTAGTAAAGGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44318993	44320152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44319055_44319982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025992	chr9	-	499	3	FSM	ENSMUSG00000074397.6	ENST00000317011.8	495	3	-2	-2	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGAATCAGCCGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44346948	44344649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_44344678_44345078_44345321_44346719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025993	chr9	-	485	2	ISM	ENSMUSG00000074397.6	ENST00000317011.8	495	3	-1	412	-1	-412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGAGCACAGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44346947	44345063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44345321_44346719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025994	chr9	+	1175	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	125	-943	125	943	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAGAAGAGAGATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	44375664	44376839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_44375700_44376800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025995	chr9	-	1127	1	ISM	ENSMUSG00000048537.17	ENSMUST00000147495.8	5424	22	40666	4	14299	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44598731	44597604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44597600_44598700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025996	chr9	-	1270	2	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	39492	0	14046	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATGAGTGTGGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	44598984	44597608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44598731_44598836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025997	chr9	-	599	4	ISM	ENSMUSG00000048537.17	ENSMUST00000135436.8	2844	11	2282	9766	2282	-9764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGAAGTCAAGCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	44610748	44607372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44607481_44609048_44609140_44609222_44609518_44610643
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025998	chr9	-	1743	4	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	10666	24629	-3248	-24629	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAGGACAGGGACAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44627810	44622237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44622358_44622444_44622586_44622937_44623220_44626610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000025999	chr9	-	1314	2	ISM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	8780	29166	-5134	-29166	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCCGTGCTCAGCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	44629696	44626774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44627963_44629570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026000	chr9	-	1110	4	ISM	ENSMUSG00000032096.17	ENST00000392859.7	1696	9	16552	-377	16552	377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGTGAATCCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	44662577	44654582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026001	chr9	-	740	4	ISM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	7619	15632	7606	-13533	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATGTCTTCTAATATG	NA	NA	NA	NA	NA	NA	NA	NA	44671523	44668492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44668582_44669857_44670064_44670177_44670358_44671258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026002	chr9	+	291	2	ISM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-206	16829	37	-16829	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATTAGCACTCCAACC	NA	NA	NA	NA	NA	NA	NA	NA	44684243	44685048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44684471_44684984
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026003	chr9	+	283	2	ISM	ENSMUSG00000002031.14	ENSMUST00000118186.2	1317	11	13513	215	13513	100	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCCTTGTCCTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	44701186	44701977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44701274_44701781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026004	chr9	+	398	1	ISM	ENSMUSG00000002031.14	ENSMUST00000002099.11	4169	12	19410	730	15943	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTGATCCAAAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	44703616	44704014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_44703600_44704000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026005	chr9	+	257	1	Genic_Genomic	ENSMUSG00000002031.14	novel	NA	NA	NA	NA	16861	47	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGAGGAGGAGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	44704534	44704791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_44704500_44704800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026006	chr9	-	202	2	ISM	ENSMUSG00000002032.18	ENST00000442938.6	1033	7	3773	-3	3696	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGAGATCTCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44706817	44706483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44706575_44706706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026007	chr9	-	163	3	ISM	ENSMUSG00000002032.18	ENST00000442938.6	1033	7	2940	219	2863	-219	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGACCAGTTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44707650	44706705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44706808_44706978_44707010_44707620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026008	chr9	-	222	2	ISM	ENSMUSG00000002032.18	ENST00000442938.6	1033	7	1077	1299	1000	-1299	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTGACTGTCAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	44709513	44707785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44707912_44709417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026009	chr9	-	253	2	ISM	ENSMUSG00000002032.18	ENST00000442938.6	1033	7	530	3090	453	-3090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCCCGACTGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44710060	44709576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44709730_44709960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026010	chr9	-	171	2	ISM	ENSMUSG00000002032.18	ENST00000442938.6	1033	7	3	3510	3	-3510	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACACTGCTGCTCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44710587	44709996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44710058_44710477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026011	chr9	-	1083	1	ISM	ENSMUSG00000002028.14	ENST00000534358.8	16468	36	76858	0	76858	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGAGCTTCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	44715734	44714651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44714700_44715700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026012	chr9	-	1168	2	ISM	ENSMUSG00000002028.14	ENST00000389506.10	13573	36	58424	15296	58422	-15296	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCCTAAAGGTCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	44734170	44732835	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44733817_44733983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026013	chr9	-	547	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTCTTTGGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44832041	44824512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_44824765_44825948_44826110_44831907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026014	chr9	-	537	3	NNC	ENSMUSG00000038717.10	novel	544	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTTGTCTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44832037	44824514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_44824761_44825948_44826110_44831907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026015	chr9	-	520	3	NNC	ENSMUSG00000038717.10	novel	544	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTTGTCTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44832022	44824514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_44824765_44825954_44826110_44831907
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026016	chr9	-	519	3	NNC	ENSMUSG00000038717.10	novel	544	3	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTTGTCTTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44832022	44824514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_44824765_44825948_44826110_44831914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026017	chr9	-	1202	1	ISM	ENSMUSG00000059890.17	ENSMUST00000117506.9	6039	20	41248	2	35810	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTGTTAGTTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	44835628	44834426	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44834400_44835600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026018	chr9	-	1453	3	ISM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	30319	1439	30319	1280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTCAGCCCAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	44841119	44835865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_44836994_44837108_44837274_44840959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026019	chr9	+	566	3	FSM	ENSMUSG00000046480.7	ENST00000529878.1	552	3	-3	-11	-3	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGATGTGTGCTGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	45050127	45061871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_45050401_45060563_45060694_45061708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026020	chr9	+	509	3	ISM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	9912	-1	9912	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTTGAGATCTACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	45249651	45251383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_45249717_45250532_45250850_45251256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026021	chr9	-	338	3	ISM	ENSMUSG00000043987.19	ENSMUST00000213154.2	6105	32	20949	26048	20949	-26048	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCAAGTCCCAAGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	45714076	45705603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_45705728_45712762_45712841_45713940
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026022	chr9	+	487	4	ISM	ENSMUSG00000032086.13	ENST00000428381.6	1325	9	11	4096	11	-4096	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGGCCCTCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	45750336	45767523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_45750587_45764185_45764275_45765924_45766010_45767460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026023	chr9	+	426	3	ISM	ENSMUSG00000032086.13	ENST00000680681.1	3103	7	3772	2775	3772	-871	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGGTGTGGGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	45769695	45770748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_45769800_45770207_45770358_45770576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026024	chr9	+	584	3	ISM	ENSMUSG00000032086.13	ENST00000428381.6	1325	9	19896	-8	4298	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACATCTGGGTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45770221	45771627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_45770358_45770576_45770749_45771351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026025	chr9	+	269	1	NIC	ENSMUSG00000032086.13	novel	4041	8	NA	NA	5427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCCTGGACCACATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	45771350	45771619	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_45771400_45771600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026026	chr9	+	661	1	ISM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	25159	0	9113	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAACTATCAGAGTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	45775036	45775697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_45775000_45775700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026027	chr9	-	1483	5	FSM	ENSMUSG00000032085.6	ENSMUST00000034590.4	1595	5	112	0	112	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATATTAACAATTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	45847244	45840916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_45841814_45842130_45842234_45842597_45842776_45842879_45843072_45847131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026028	chr9	-	354	4	ISM	ENSMUSG00000003131.8	ENST00000529887.6	438	5	2595	0	2595	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGTCAAAATGAGGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	45887432	45869535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_45869556_45884239_45884363_45886378_45886496_45887338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026029	chr9	-	409	1	ISM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	21784	0	15462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTTTGTTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	45874565	45874156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_45874200_45874600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026030	chr9	-	509	2	ISM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	12336	-109	5671	109	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGGGGAGGAGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	45884356	45879872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_45880265_45884239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026031	chr9	-	407	4	ISM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	6676	4258	11	-4258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAATCTTTTTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45890016	45884239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_45884363_45886378_45886496_45887338_45887429_45889939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026032	chr9	+	626	2	FSM	ENSMUSG00000032079.13	ENST00000673688.1	1122	2	0	496	0	-188	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCAGGAGCTGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	46180533	46181522	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_46180624_46180986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026033	chr9	+	573	1	ISM	ENSMUSG00000032079.13	ENSMUST00000121598.8	2515	4	1516	1198	913	1	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCCGGTTAACCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	46181446	46182019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_46181400_46182000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026034	chr9	+	1872	4	ISM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	5238	0	5238	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGTACAGCGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	46189599	46193941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_46189713_46190966_46191054_46191213_46191280_46192335
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026035	chr9	+	442	3	ISM	ENSMUSG00000032076.21	ENSMUST00000239368.2	1937	9	257616	36903	257595	-36903	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGGAGACCGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	47699265	47708843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_47699416_47700994_47701148_47708704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026036	chr9	+	298	2	ISM	ENSMUSG00000032076.21	ENSMUST00000239368.2	1937	9	267054	34918	267033	-34918	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCCGAGCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	47708703	47710828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_47708843_47710669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026037	chr9	+	434	3	ISM	ENSMUSG00000032076.21	ENSMUST00000239368.2	1937	9	269018	20503	268997	-20503	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACGTGAGAAGATACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	47710667	47725243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_47710829_47721341_47721442_47725070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026038	chr9	+	324	3	ISM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	283516	5147	283400	-2157	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGGTGTTTGCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	47725070	47759531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_47725244_47730031_47730116_47759464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026039	chr9	+	374	2	ISM	ENSMUSG00000032076.21	ENSMUST00000034581.4	1254	9	317790	-119	317790	-78	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGGAGAGATGCGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	47759460	47761807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_47759597_47761569
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026040	chr9	+	328	1	ISM	ENSMUSG00000032076.21	ENSMUST00000114548.8	4482	10	322881	4	322681	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCCTTTAAATCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	47764351	47764679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_47764400_47764700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026041	chr9	+	171	2	NNC	ENSMUSG00000044229.10	novel	1004	4	NA	NA	41	-4913	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTCTCCAAATGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	48304142	48305480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_48304272_48305438
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026042	chr9	+	298	3	ISM	ENSMUSG00000044229.10	ENST00000424261.6	1004	4	104	2443	104	-2443	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCCGCCAGTGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	48304205	48307950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_48304278_48305438_48305501_48307786
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026043	chr9	+	317	2	ISM	ENSMUSG00000044229.10	ENST00000424261.6	1004	4	3724	410	3724	-410	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACGGATAATTGACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	48307825	48309983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_48307994_48309834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026044	chr9	+	204	1	ISM	ENSMUSG00000044229.10	ENSMUST00000216998.2	4871	9	236870	777	6089	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGAACTTAAAAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	48310190	48310394	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_48310200_48310400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026045	chr9	-	445	1	Genic_Genomic	ENSMUSG00000032026.8	novel	NA	NA	NA	NA	11624	1	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGGCACCCTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	48380255	48379810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_48379800_48380300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026046	chr9	-	653	4	ISM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	6096	59	6064	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATAGGCCGGTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48385815	48379870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026047	chr9	-	385	4	ISM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	1216	4520	1184	1129	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGCTGCATTTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	48390695	48384331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_48384441_48385701_48385814_48386419_48386498_48390609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026048	chr9	-	243	3	ISM	ENSMUSG00000032026.8	ENST00000539754.5	736	7	5411	4238	5382	1118	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGCAGGTAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	48386497	48384342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_48384441_48385701_48385769_48386419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026049	chr9	-	191	1	ISM	ENSMUSG00000032026.8	ENSMUST00000217037.2	609	5	6239	0	6228	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAATTTGGTCATCATT	NA	NA	NA	NA	NA	NA	NA	NA	48385651	48385460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_48385500_48385700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026050	chr9	-	479	4	ISM	ENSMUSG00000032026.8	ENSMUST00000217037.2	609	5	-20	240	1	-149	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCCAATCCTATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	48391910	48385700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_48385814_48386419_48386498_48390609_48390694_48391706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026051	chr9	-	188	3	ISM	ENSMUSG00000032026.8	ENST00000539754.5	736	7	1227	5626	1198	-179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCCTCCGGGGCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	48390681	48385730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_48385769_48386419_48386498_48390609
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026052	chr9	-	1146	1	Genic_Genomic	ENSMUSG00000042396.11	novel	NA	NA	NA	NA	5453	5	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTTTATTTTGACGT	NA	NA	NA	NA	NA	NA	NA	NA	48401141	48399995	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_48400000_48401100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026053	chr9	-	1453	4	ISM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	1113	180	1110	-180	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACTGCAAGGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	48405484	48400180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026054	chr9	+	512	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	19	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGTGTGACGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	48406760	48407272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_48406800_48407300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026055	chr9	-	1034	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	11	-2	11	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGCTCACTGTATGGT	NA	NA	NA	NA	NA	NA	NA	NA	48516442	48503174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_48503663_48514653_48514862_48516104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026056	chr9	+	438	3	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	11061	9113	11061	-9113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTCACCGACGCCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	48977973	48980959	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_48978143_48979959_48980143_48980873
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026057	chr9	+	449	3	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	13050	7161	13050	-7161	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCCATTTGTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	48979962	48982911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_48980143_48980873_48981113_48982881
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026058	chr9	+	439	3	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	18436	1115	18436	-1115	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTGTTTTCTATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	48985348	48988957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_48985450_48986204_48986337_48988751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026059	chr9	+	458	2	ISM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	21837	321	21837	-321	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGCCTGGACGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	48988749	48989751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_48988955_48989498
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026060	chr9	+	418	1	Genic_Genomic	ENSMUSG00000032264.10	novel	NA	NA	NA	NA	22743	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAGTGTCTTTAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	48989655	48990073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_48989700_48990100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026061	chr9	+	486	3	ISM	ENSMUSG00000032268.14	ENST00000299882.11	1011	7	339	2310	339	-2310	internal_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGCTCTGGCCTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	49020638	49024602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_49020783_49023487_49023651_49024423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026062	chr9	+	398	3	ISM	ENSMUSG00000032268.14	ENST00000299882.11	1011	7	4116	468	4116	-468	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTGGATGGAAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	49024415	49026444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_49024603_49025793_49025893_49026332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026063	chr9	+	336	3	ISM	ENSMUSG00000032268.14	ENST00000299882.11	1011	7	5549	-1	5549	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGAGTGTGGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	49025848	49026913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_49025893_49026332_49026476_49026764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026064	chr9	-	1273	1	NIC	ENSMUSG00000032257.7	novel	2714	8	NA	NA	10079	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCCCAGGCAGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	49328150	49326877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_49326900_49328200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026065	chr9	-	1345	2	ISM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	8225	0	8225	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACCCCAGGCAGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	49330004	49326877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_49328151_49329932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026066	chr9	-	161	2	ISM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	40376	8268	40376	-8268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTCATCATGAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	49357149	49356530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_49356584_49357041
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026067	chr9	-	711	5	ISM	ENSMUSG00000039542.17	ENST00000531044.5	2564	17	46357	0	46357	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAATAATCCCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	49434846	49416680	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026068	chr9	-	806	1	FSM	ENSMUSG00000058443.6	ENSMUST00000076364.6	768	1	-22	-16	-22	16	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTGAGCAAGCTGACGA	NA	NA	NA	NA	NA	NA	NA	NA	50256290	50255484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_50255500_50256300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026069	chr9	-	873	4	ISM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	3365	0	3313	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	50436586	50432916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026070	chr9	-	332	4	FSM	ENSMUSG00000032067.7	ENST00000525803.1	329	4	-2	-1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGTAGACAGGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	50439901	50433500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_50433637_50433828_50433900_50438169_50438250_50439856
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026071	chr9	-	278	3	NNC	ENSMUSG00000032067.7	novel	329	4	NA	NA	1653	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTGTAGACAGGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	50438246	50433501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_50433637_50433833_50433900_50438169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026072	chr9	-	204	2	ISM	ENSMUSG00000032067.7	ENST00000525803.1	329	4	5991	11	5991	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTAGGGTTGCTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	50433908	50433512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_50433637_50433828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026073	chr9	+	776	5	NNC	ENSMUSG00000039217.14	novel	860	6	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATGTGTCCAGCCCAATT	NA	NA	NA	NA	NA	NA	NA	NA	50476759	50493137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_50476827_50486567_50486663_50489060_50489193_50490586_50490721_50492789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026074	chr9	-	914	1	Genic_Genomic	ENSMUSG00000000171.6	novel	NA	NA	NA	NA	6561	19	mono-exon	FALSE	NA	NA	NA	NA	NA	561	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTTTTTTTTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	50508551	50507637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_50507600_50508600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026075	chr9	-	1217	4	NNC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATATTATATAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	50515100	50507662	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_50508551_50510056_50510206_50511847_50511965_50515037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026076	chr9	+	282	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	5	231	5	-231	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCAGTAGGCCATACCT	NA	NA	NA	NA	NA	NA	NA	NA	50515214	50516389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_50515340_50516232
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026077	chr9	+	214	1	Genic_Genomic	ENSMUSG00000039016.6	novel	NA	NA	NA	NA	1198	1	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTCTTCTAAATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	50516407	50516621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_50516400_50516600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026078	chr9	-	1862	1	ISM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	23286	0	22999	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATCTGTTGGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	50547794	50545932	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_50545900_50547800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026079	chr9	-	2053	3	ISM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	21727	139	21440	-139	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTTCTCAGGTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	50549353	50546071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_50547855_50548755_50548893_50549220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026080	chr9	-	1061	1	NIC	ENSMUSG00000032062.4	novel	1242	4	NA	NA	5770	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGATTGATTGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	50652051	50650990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_50651000_50652100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026081	chr9	-	1107	2	ISM	ENSMUSG00000032062.4	ENSMUST00000239417.2	1242	4	5155	23	5155	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAATAGTATGTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	50652666	50651013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_50652050_50652595
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026082	chr9	-	537	2	FSM	ENSMUSG00000038086.5	ENSMUST00000217159.2	552	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50663639	50662377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_50662752_50663476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026083	chr9	-	773	2	FSM	ENSMUSG00000038086.5	ENSMUST00000042790.5	773	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50663593	50662377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_50663034_50663476
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026084	chr9	-	658	1	NIC	ENSMUSG00000038086.5	novel	773	2	NA	NA	558	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50663035	50662377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_50662400_50663000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026085	chr9	+	1119	4	FSM	ENSMUSG00000032060.11	ENSMUST00000217475.2	1117	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCGTGTTTGCAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	50662624	50667938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_50662877_50664380_50664778_50665811_50665935_50667591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026086	chr9	+	676	3	NNC	ENSMUSG00000032060.11	novel	1117	4	NA	NA	36	-1964	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAAGGTTCTGGGGGACG	NA	NA	NA	NA	NA	NA	NA	NA	50662660	50665879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_50662877_50664385_50664778_50665811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026087	chr9	+	947	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGAAAATCTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	50664206	50667844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_50664778_50665811_50665935_50667591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026088	chr9	+	852	4	FSM	ENSMUSG00000032060.11	ENSMUST00000214962.2	846	4	0	-6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCGTGTTTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	50664292	50667936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_50664385_50664485_50664778_50665811_50665935_50667591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026089	chr9	+	347	1	NIC	ENSMUSG00000032060.11	novel	1117	4	NA	NA	3270	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTCGTGTTTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	50667589	50667936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_50667600_50667900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026090	chr9	-	2113	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	-1	-30	-1	30	multi-exon	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAGCTTAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	50679753	50674097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026091	chr9	+	2136	3	ISM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	2020	-1	1811	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGAGCATGTGTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	50681555	50684649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_50681614_50681931_50682091_50682730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026092	chr9	+	882	2	ISM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	47566	44	47566	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCTTTAAAACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	50733884	50754784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_50734016_50754033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026093	chr9	+	1283	3	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	21844	462	21815	-462	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGCGCACACATCACAC	NA	NA	NA	NA	NA	NA	NA	NA	50790080	50792269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_50790141_50790509_50790602_50791138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026094	chr9	+	1258	1	ISM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	23237	0	23208	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATTTCACAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	50791473	50792731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_50791500_50792700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026095	chr9	-	876	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	51874847	51854605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026096	chr9	+	351	2	ISM	ENSMUSG00000032050.19	ENSMUST00000061352.11	1502	11	-117	14271	-17	-14271	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGTTTTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51959453	51972203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51959733_51972131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026097	chr9	+	141	2	ISM	ENSMUSG00000032050.19	ENSMUST00000061352.11	1502	11	12578	11511	1	-11511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTTCACCCACAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	51972148	51974963	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51972204_51974877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026098	chr9	+	184	2	ISM	ENSMUSG00000032050.19	ENSMUST00000061352.11	1502	11	15307	10215	-1288	-10215	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTGTATAATAACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	51974877	51976259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51974962_51976159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026099	chr9	+	199	2	ISM	ENSMUSG00000032050.19	ENST00000367074.4	1514	11	-5	20599	-5	-9426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTTTCTTCTTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	51976160	51977048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51976256_51976944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026100	chr9	+	257	3	ISM	ENSMUSG00000032050.19	ENST00000367074.4	1514	11	948	18151	948	-6978	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAAGAATAAGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	51977113	51979496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51977220_51978660_51978745_51979429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026101	chr9	+	244	2	ISM	ENSMUSG00000032050.19	ENST00000367074.4	1514	11	3262	17446	3262	-6273	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAGGATATTTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	51979427	51980201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51979577_51980106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026102	chr9	+	262	2	ISM	ENSMUSG00000032050.19	ENST00000367074.4	1514	11	3941	16568	3941	-5395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCGTGTGTCCTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	51980106	51981079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51980204_51980914
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026103	chr9	+	247	2	ISM	ENSMUSG00000032050.19	ENST00000367074.4	1514	11	4789	13071	4789	-1898	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGGTAAAGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	51980954	51984576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51981079_51984453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026104	chr9	+	236	2	ISM	ENSMUSG00000032050.19	ENST00000367074.4	1514	11	8301	5211	8301	-5211	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCAAGCAAGCTGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	51984466	51992436	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51984585_51992318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026105	chr9	+	191	2	ISM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	32968	6193	16217	-3811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGACTGTTTTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	51992382	51993836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51992480_51993742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026106	chr9	+	205	2	ISM	ENSMUSG00000032050.19	ENST00000367074.4	1514	11	17576	1134	17576	-1134	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGACGAGCAGGACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	51993741	51996513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51993836_51996402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026107	chr9	+	1014	4	ISM	ENSMUSG00000032050.19	ENST00000528900.5	1515	8	24315	0	20297	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCTGGAGCCTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	51996462	52014713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51996646_51997614_51997776_52011670_52011764_52014136
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026108	chr9	+	341	1	ISM	ENSMUSG00000032050.19	ENSMUST00000163153.9	4131	14	41216	6	23523	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	51999688	52000029	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_51999700_5.2e+07
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026109	chr9	+	130	1	Genic_Genomic	ENSMUSG00000032050.19	novel	NA	NA	NA	NA	38419	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATCTGGAGCCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	52014584	52014714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_52014600_52014700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026110	chr9	-	2752	5	ISM	ENSMUSG00000035164.9	ENST00000528673.5	2921	6	5011	0	5011	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	52055652	52026510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026111	chr9	+	217	2	ISM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	4424	11345	4424	-11345	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGAGCAGGATTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	53299748	53301822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53299878_53301734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026112	chr9	+	224	2	ISM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	11895	3843	11895	-3843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTTCGGACGTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	53307219	53309324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53307339_53309219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026113	chr9	+	266	2	ISM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	13893	2022	13893	-2022	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATCTTTAAGACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	53309217	53311145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53309325_53310986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026114	chr9	+	208	1	Genic_Genomic	ENSMUSG00000034487.5	novel	NA	NA	NA	NA	17636	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGCCTGCATAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	53312960	53313168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_53313000_53313200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026115	chr9	-	492	1	Genic_Genomic	ENSMUSG00000032047.6	novel	NA	NA	NA	NA	29374	5	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAAGTTACAGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	53492308	53491816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_53491800_53492300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026116	chr9	-	633	3	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	25472	1740	25472	-1740	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTACATGGCTTTAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	53496210	53493561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_53493966_53494736_53494895_53496139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026117	chr9	-	339	3	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	22815	2914	22815	-2914	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTACCTAACAAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	53498867	53494735	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_53494895_53496139_53496205_53498752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026118	chr9	-	480	4	ISM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	15594	10796	15594	-10796	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGTGAAAGGTAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	53506088	53502617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_53502758_53503267_53503412_53505705_53505807_53505993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026119	chr9	+	156	1	Genic_Genomic	ENSMUSG00000086914.2	novel	NA	NA	NA	NA	13867	3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTTCAAATTGGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	53592412	53592568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_53592400_53592600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026120	chr9	+	344	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	135	19146	135	-19146	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTACGTCACATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	53679006	53705293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53679179_53705121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026121	chr9	+	303	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	26251	16017	26251	-16017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAGAGGGTTTGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	53705122	53708422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53705298_53708294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026122	chr9	+	292	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	29420	10377	29420	-10377	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACTGTATCACTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	53708291	53714062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53708423_53713901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026123	chr9	+	322	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	35025	8953	35025	-8953	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATTTAAAACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	53713896	53715486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53714062_53715329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026124	chr9	+	362	3	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	36462	6125	36462	-6125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAAATAGATTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	53715333	53718314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53715487_53716969_53717023_53718158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026125	chr9	+	318	2	ISM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	39286	204	39286	-204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTCTGCAGTCTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	53718157	53724235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53718314_53724073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026126	chr9	+	204	1	ISM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	45414	999	45364	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCCAAGGGTAGTGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	53724235	53724439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_53724200_53724400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026127	chr9	-	1368	1	ISM	ENSMUSG00000041268.18	ENSMUST00000118163.8	10614	44	134999	102	134828	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAGTTTGGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	54273911	54272543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54272500_54273900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026128	chr9	-	1591	2	ISM	ENSMUSG00000041268.18	ENST00000543779.6	10278	43	133679	0	133679	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTAGTTTGGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	54275060	54272543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54273912_54274837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026129	chr9	-	1460	3	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	97303	33565	97303	-33565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGAAGTTTGTGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	54311436	54307223	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54307418_54308200_54309271_54311240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026130	chr9	-	1440	3	ISM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	95567	34578	95567	-34578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAACTCAAATTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	54313172	54308236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54309271_54311240_54311506_54313031
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026131	chr9	-	1440	2	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	84663	45564	84622	-45300	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCTATGCGCTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	54324117	54318958	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54318995_54322713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026132	chr9	-	1587	2	ISM	ENSMUSG00000041268.18	ENSMUST00000118600.8	9465	43	81552	49606	81511	-49342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATCAGAGGATCAATATT	NA	NA	NA	NA	NA	NA	NA	NA	54327228	54323000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54324388_54327028
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026133	chr9	+	118	2	ISM	ENSMUSG00000046460.16	ENST00000409568.6	1511	6	5590	2346	2222	-2346	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGAACAAGGACACTGG	NA	NA	NA	NA	NA	NA	NA	NA	54448489	54448751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54448582_54448725
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026134	chr9	+	113	2	ISM	ENSMUSG00000046460.16	ENSMUST00000060242.12	2759	4	2467	1656	2467	-449	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCAGAGGGTTTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	54448734	54450648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54448785_54450585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026135	chr9	-	695	1	Genic_Genomic	ENSMUSG00000037493.7	novel	NA	NA	NA	NA	14540	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTCCGTGTCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	54452771	54452076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_54452100_54452800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026136	chr9	-	1039	3	ISM	ENSMUSG00000037493.7	ENSMUST00000041901.7	1433	6	11734	0	11543	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTCTCCGTGTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	54455768	54452077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54452769_54453172_54453369_54455616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026137	chr9	-	361	3	ISM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	10133	670	10133	-670	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAAAGTCATTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54457178	54453269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54453369_54455616_54455765_54457064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026138	chr9	-	298	3	ISM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	0	3039	0	-3039	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATGCCTTCAAGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	54467311	54455638	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54455765_54457064_54457177_54467251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026139	chr9	+	500	5	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	5310	5223	5310	-5223	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTCACTGTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	54502449	54505947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54502565_54503390_54503474_54504118_54504253_54505676_54505780_54505882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026140	chr9	+	447	5	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	6248	4235	6248	-4235	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACGGTGTTGCCATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54503387	54506935	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026141	chr9	+	465	5	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	7006	2720	7006	-2720	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCAAAAATCGAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	54504145	54508450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026142	chr9	+	1787	5	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	8537	-776	8537	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCGTTTGCATTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54505676	54511946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026143	chr9	+	499	1	ISM	ENSMUSG00000032279.12	ENSMUST00000217484.2	2580	11	17061	768	13539	7	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCCTATACATGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	54510678	54511177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54510700_54511200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026144	chr9	-	308	1	ISM	ENSMUSG00000032281.12	ENSMUST00000034822.12	2880	14	56686	0	56686	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATGTCTTTTGTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	54512468	54512160	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54512200_54512500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026145	chr9	-	311	2	ISM	ENSMUSG00000032281.12	ENSMUST00000034822.12	2880	14	52672	472	52672	-472	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCTTCCTGAGCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	54516482	54512632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54512761_54516299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026146	chr9	-	320	2	ISM	ENSMUSG00000032281.12	ENSMUST00000034822.12	2880	14	52079	4163	52079	-4163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCAGGTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54517075	54516323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54516547_54516978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026147	chr9	+	940	3	FSM	ENSMUSG00000032285.16	ENST00000489435.2	934	3	-3	-3	-3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTATACCCATTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	54606495	54608307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_54606698_54607005_54607145_54607708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026148	chr9	+	928	3	NNC	ENSMUSG00000032285.16	novel	934	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATTATACCCATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	54606498	54608305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_54606698_54607012_54607145_54607708
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026149	chr9	+	927	3	NNC	ENSMUSG00000032285.16	novel	934	3	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCATTATACCCATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	54606498	54608305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_54606698_54607005_54607145_54607716
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026150	chr9	+	1297	6	FSM	ENSMUSG00000032285.16	ENST00000446172.2	1293	6	1	-5	1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTCATTTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	54613347	54622196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621659_54621748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026151	chr9	+	519	1	Genic_Genomic	ENSMUSG00000032285.16	novel	NA	NA	NA	NA	9738	4	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGCTTTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54623084	54623603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_54623100_54623600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026152	chr9	-	281	1	Genic_Genomic	ENSMUSG00000061559.16	novel	NA	NA	NA	NA	17044	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTGTGAACGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	54624722	54624441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_54624400_54624700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026153	chr9	-	359	2	ISM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	15165	0	15150	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	54626616	54624442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54624720_54626534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026154	chr9	-	350	4	ISM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	10353	2102	10338	-2097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGATCAGGTATGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	54631428	54626544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54626614_54627543_54627637_54630117_54630212_54631334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026155	chr9	-	430	3	ISM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	6220	7167	6205	-7162	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGACCTCCCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	54635561	54631609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_54631759_54634872_54635046_54635453
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026156	chr9	+	865	6	FSM	ENSMUSG00000032301.14	ENST00000413382.6	857	6	-2	-6	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTGAAAGGATACTTT	NA	NA	NA	NA	NA	NA	NA	NA	54859621	54865315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_54859668_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026157	chr9	+	687	6	ISM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	1887	296	337	-79	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGCTGAGCGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	54859960	54865018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026158	chr9	+	829	5	ISM	ENSMUSG00000032301.14	ENST00000413382.6	857	6	2307	0	-192	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGGTTATGGTGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	54861930	54865309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026159	chr9	+	499	4	ISM	ENSMUSG00000032301.14	ENST00000558281.5	684	6	2323	-22	-176	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGTCCTGGCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	54861946	54865119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_54862025_54862164_54862254_54863540_54863672_54864918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026160	chr9	+	464	3	FSM	ENSMUSG00000032301.14	ENST00000558094.1	459	3	-1	-4	-1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGTCCTGGCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	54862121	54865119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_54862254_54863540_54863672_54864918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026161	chr9	+	430	3	NNC	ENSMUSG00000032301.14	novel	459	3	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGAGCTGTCCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54862146	54865115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_54862254_54863540_54863667_54864918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026162	chr9	+	558	3	NNC	ENSMUSG00000032301.14	novel	1165	9	NA	NA	1506	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGTGAAAGGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	54863628	54865314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_54863667_54864094_54864219_54864918
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026163	chr9	+	626	6	FSM	ENSMUSG00000035594.11	ENST00000559554.5	636	6	11	-1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAATTACACTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	54888895	54913861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_54889006_54905295_54905448_54907735_54907781_54909683_54909794_54911614_54911660_54913697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026164	chr9	+	1105	1	ISM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	57571	0	56342	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55113708	55114813	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_55113700_55114800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026165	chr9	+	2112	7	NNC	ENSMUSG00000032309.16	novel	2112	7	NA	NA	5	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTAATTATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55116213	55131718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_55116473_55116636_55116780_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026166	chr9	-	304	4	ISM	ENSMUSG00000032314.15	ENST00000433983.6	825	10	26736	-1	26736	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGTCTTAAGAGGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	55392623	55368899	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_55368985_55372077_55372144_55389556_55389640_55392553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026167	chr9	-	298	3	ISM	ENSMUSG00000034007.11	ENSMUST00000037408.9	5158	31	81372	265593	81372	-264709	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGCCCGTGTAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	55745517	55722759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_55722788_55723937_55724094_55745403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026168	chr9	+	2025	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCACCTGAGACATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55949141	55966363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026169	chr9	-	1648	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	68	0	-47	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	56068273	56043167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026170	chr9	-	804	1	NIC	ENSMUSG00000032324.12	novel	1716	7	NA	NA	23804	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCAATTGTAAATAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56044022	56043218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_56043200_56044000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026171	chr9	+	885	1	FSM	ENSMUSG00000118653.2	ENSMUST00000239472.2	988	1	119	-16	119	16	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGTAAACAAGAAAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	56344859	56345744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_56344900_56345700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026172	chr9	+	2309	1	ISM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	76019	0	75798	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGACCAGTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	56401911	56404220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_56401900_56404200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026173	chr9	+	488	2	ISM	ENSMUSG00000032911.7	ENST00000559989.1	1153	4	72	2730	72	-2730	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGATCCTCTTGAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	56795811	56797570	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_56796071_56797341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026174	chr9	+	621	3	ISM	ENSMUSG00000032911.7	ENST00000559989.1	1153	4	1803	0	1803	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTAAGGGCCTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	56797542	56800300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_56797825_56798273_56798451_56800138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026175	chr9	-	606	2	FSM	ENSMUSG00000032733.7	ENSMUST00000050916.7	4571	2	2620	1345	2620	-1345	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCTACCTGCGCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	56833035	56825821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_56825989_56832596
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026176	chr9	+	935	1	FSM	ENSMUSG00000032288.10	ENSMUST00000034827.10	924	1	-7	-4	-7	4	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGGTCGTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56844751	56845686	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_56844800_56845700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026177	chr9	+	804	4	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	24333	0	24333	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	NA	NA	NA	NA	NA	NA	NA	56882494	56890490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_56882595_56885302_56885381_56888128_56888210_56889945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026178	chr9	+	1464	1	Genic_Genomic	ENSMUSG00000032290.8	novel	NA	NA	NA	NA	66422	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTAGTTTCATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	56968628	56970092	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_56968600_56970100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026179	chr9	+	592	2	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	22164	17343	22164	-17133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGTTCCCAAGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	57016028	57018307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57016176_57017862
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026180	chr9	+	619	2	ISM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	38748	648	38748	-438	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGATGGATGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	57032612	57035002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57032661_57034431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026181	chr9	+	605	1	ISM	ENSMUSG00000042557.15	ENSMUST00000167715.8	4961	22	52214	210	40971	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTAGCTTCTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	57034835	57035440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57034800_57035400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026182	chr9	-	359	1	Genic_Genomic	ENSMUSG00000032298.14	novel	NA	NA	NA	NA	5608	2	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCAGAGCCCCTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57048710	57048351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_57048400_57048700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026183	chr9	-	633	4	ISM	ENSMUSG00000032298.14	ENST00000355059.9	1860	6	2032	667	2021	-667	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTATTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	57052297	57049020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57049357_57051470_57051599_57051921_57052022_57052228
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026184	chr9	+	345	1	ISM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	11687	1	11591	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGCAGCCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	57049660	57050005	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57049700_57050000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026185	chr9	-	463	3	ISM	ENSMUSG00000032298.14	ENSMUST00000034842.5	1170	9	119	1725	119	-1725	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACAGTTCTAGAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	57054199	57052264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57052293_57052381_57052502_57053884
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026186	chr9	-	4066	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	86	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	57169809	57160399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_57161613_57163668_57166424_57169711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026187	chr9	-	138	1	ISM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	8829	529	5306	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAACTACCATGCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	57161066	57160928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57160900_57161100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026188	chr9	-	1205	4	FSM	ENSMUSG00000063849.7	ENST00000567336.1	549	4	-3	-653	-3	297	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGACCTTTTAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	57342340	57321257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57342185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026189	chr9	-	104	1	NIC	ENSMUSG00000063849.7	novel	2744	7	NA	NA	20324	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGATGCCCCTGCACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	57322013	57321909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_57321900_57322000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026190	chr9	-	183	2	NNC	ENSMUSG00000063849.7	novel	549	4	NA	NA	19822	-57	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCGTGCTCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	57322515	57321967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_57322004_57322368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026191	chr9	-	420	3	ISM	ENSMUSG00000063849.7	ENST00000568649.5	516	4	-1	456	-1	-456	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTCTGTGGTGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	57342338	57322366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57322538_57328408_57328505_57342185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026192	chr9	-	216	2	NNC	ENSMUSG00000063849.7	novel	516	4	NA	NA	13835	-509	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGTGGAGATTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57328502	57322419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_57322538_57328404
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026193	chr9	-	2880	4	ISM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	20860	0	20860	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57354481	57348609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026194	chr9	+	646	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	1	-2	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTCTTGTGATGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	57428562	57439711	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026195	chr9	+	583	5	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	67	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57428628	57439710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_57428699_57436238_57436356_57437523_57437650_57438951_57439076_57439564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026196	chr9	+	267	2	FSM	ENSMUSG00000000088.8	ENST00000562233.5	251	2	-14	-2	-14	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTGTGATGTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	57436236	57439712	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_57436356_57439564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026197	chr9	+	504	4	NNC	ENSMUSG00000000088.8	novel	645	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57436237	57439710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_57436356_57437523_57437650_57438961_57439076_57439564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026198	chr9	+	246	2	NNC	ENSMUSG00000000088.8	novel	251	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57436249	57439710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_57436350_57439564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026199	chr9	+	148	1	NIC	ENSMUSG00000000088.8	novel	251	2	NA	NA	3312	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTCTTGTGATGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57439562	57439710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_57439600_57439700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026200	chr9	+	822	6	NNC	ENSMUSG00000032305.16	novel	821	7	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGCCTGCAGGGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	57444887	57449863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937_57448099_57449647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026201	chr9	+	818	6	NNC	ENSMUSG00000032305.16	novel	821	7	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCCTGCAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	57444891	57449862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446582_57447940_57448099_57449647
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026202	chr9	+	819	6	NNC	ENSMUSG00000032305.16	novel	821	7	NA	NA	3	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCCTGCAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	57444892	57449862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937_57448099_57449644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026203	chr9	+	781	6	NIC	ENSMUSG00000032305.16	novel	821	7	NA	NA	16	1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGCCTGCAGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	57444905	57449862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937_57448099_57449669
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026204	chr9	+	1499	3	ISM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	552	1139	473	-535	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCACCTGCCCCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	57445362	57449326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57445395_57446093_57446172_57447937
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026205	chr9	+	1043	1	ISM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	4579	0	4535	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	57449424	57450467	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57449400_57450500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026206	chr9	-	329	1	ISM	ENSMUSG00000032306.15	ENST00000352410.9	1597	8	7883	0	6379	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCTGTAGTTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	57451676	57451347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57451300_57451700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026207	chr9	-	561	2	ISM	ENSMUSG00000032306.15	ENST00000535694.5	1149	7	5831	-317	5831	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCTGTAGTTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	57452224	57451347	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57451681_57451996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026208	chr9	-	1594	6	ISM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	1988	0	-3	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCAGCCTTTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	57458058	57451538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026209	chr9	-	317	2	NNC	ENSMUSG00000032306.15	novel	1388	7	NA	NA	5832	-47	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCGTCAAAGTAATTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	57452223	57451585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_57451676_57451996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026210	chr9	-	510	3	ISM	ENSMUSG00000032306.15	ENST00000566377.5	1388	7	3638	649	2134	-332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTAGTCTCTCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	57455921	57451996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57452222_57453676_57453851_57455810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026211	chr9	-	430	3	ISM	ENSMUSG00000032306.15	ENST00000352410.9	1597	8	2	5013	2	-4696	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCCGGCCAGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	57459557	57456360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57456462_57457855_57458057_57459429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026212	chr9	+	1405	4	ISM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	20549	350	20549	-350	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGCCGAGCCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	57488774	57495728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57488933_57490134_57490237_57494362_57494484_57494704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026213	chr9	+	1078	1	Genic_Genomic	ENSMUSG00000040188.11	novel	NA	NA	NA	NA	26776	1	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGCCCTGATGTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	57495001	57496079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_57495000_57496100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026214	chr9	+	316	2	ISM	ENSMUSG00000032308.10	ENSMUST00000053230.7	2826	16	58	5771	58	-5771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTGAGCCCAGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	57496792	57497745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57496970_57497606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026215	chr9	-	427	1	ISM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	18581	0	6995	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	57534355	57533928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57533900_57534400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026216	chr9	+	1399	5	FSM	ENSMUSG00000032315.7	ENST00000395049.8	1431	5	3	29	3	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACTTCCAAGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	57607407	57610107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_57608211_57608957_57609085_57609171_57609262_57609354_57609479_57609852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026217	chr9	+	2092	4	ISM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	18792	2809	18792	-2809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTGGGTACAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	57634614	57656973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57634805_57647172_57647327_57651867_57652086_57655443
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026218	chr9	+	1548	1	ISM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	42412	0	42412	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGACTCCAACTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	57658234	57659782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57658200_57659800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026219	chr9	-	1315	5	ISM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	5	7575	5	-7575	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGTGCTGGTACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	57673138	57665566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026220	chr9	+	479	5	ISM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	3519	8208	3519	-8208	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGGCCCTCAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	57821835	57829041	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026221	chr9	+	474	4	ISM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	10593	6690	10593	-6690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTCTCCCCACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	57828909	57830559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57829044_57829258_57829309_57829733_57829902_57830437
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026222	chr9	+	381	2	ISM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	12119	-2	12119	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57830435	57837251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57830561_57836995
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026223	chr9	+	302	2	ISM	ENSMUSG00000038264.9	ENSMUST00000043059.9	3297	14	13	9231	11	-8276	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTCAACTTCCCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	57847408	57860917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57847612_57860818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026224	chr9	+	277	3	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	14425	6740	14425	-6740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCAGATCCTGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	57861822	57862453	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57861901_57862106_57862195_57862342
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026225	chr9	+	438	3	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	14943	5385	14943	-5385	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAGTAGTTCACGACA	NA	NA	NA	NA	NA	NA	NA	NA	57862340	57863808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57862454_57862985_57863126_57863623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026226	chr9	+	295	2	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	16225	4493	16225	-4493	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATTGACCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	57863622	57864700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57863809_57864591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026227	chr9	+	276	2	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	17193	4238	17193	-4238	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGACCTTCCATGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57864590	57864955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57864701_57864789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026228	chr9	+	483	3	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	17391	1197	17391	-1197	internal_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATTGGCCCCAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	57864788	57867996	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57864989_57867537_57867666_57867841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026229	chr9	+	795	3	ISM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	20451	86	20451	-86	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGCTGGGCCATCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	57867848	57869107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57867997_57868139_57868202_57868522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026230	chr9	+	631	1	ISM	ENSMUSG00000038264.9	ENST00000261918.9	3302	14	21169	954	21166	1	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCTGAGAGCCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	57868563	57869194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57868600_57869200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026231	chr9	+	287	1	ISM	ENSMUSG00000038264.9	ENST00000261918.9	3302	14	22467	0	22464	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGTGCCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	57869861	57870148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_57869900_57870100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026232	chr9	+	767	4	FSM	ENSMUSG00000032327.15	ENST00000432245.6	766	4	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCCTGACTCTCACC	NA	NA	NA	NA	NA	NA	NA	NA	58042396	58048541	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_58042492_58046592_58046725_58047696_58047837_58048141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026233	chr9	+	672	3	NNC	ENSMUSG00000032327.15	novel	766	4	NA	NA	4199	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCCTGCCTGACTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	58046595	58048540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_58046729_58047696_58047837_58048141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026234	chr9	-	2230	2	FSM	ENSMUSG00000037206.16	ENSMUST00000041477.15	2223	2	-3	-4	-3	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGATGCTCTGCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58066507	58063546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_58065514_58066244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026235	chr9	-	529	1	Genic_Genomic	ENSMUSG00000037206.16	novel	NA	NA	NA	NA	1750	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTGATGCTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	58064078	58063549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_58063500_58064100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026236	chr9	-	640	2	FSM	ENSMUSG00000037206.16	ENSMUST00000168864.4	2076	2	2	1434	2	-1434	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCACTTGCAGATCAATG	NA	NA	NA	NA	NA	NA	NA	NA	58065826	58064990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_58065514_58065709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026237	chr9	+	542	2	Antisense	novelGene_ENSMUSG00000037206.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGCTCTTTCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	58065037	58065775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_58065496_58065691
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026238	chr9	-	545	2	NNC	ENSMUSG00000037206.16	novel	2076	2	NA	NA	5	-1530	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTTTAGCAGCCTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	58065823	58065086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_58065514_58065705
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026239	chr9	-	1191	4	FSM	ENSMUSG00000036986.17	ENST00000567543.5	1189	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGACTTCAGCCTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	58154711	58136629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_58136691_58140435_58140531_58141635_58142217_58154257
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026240	chr9	-	816	3	NNC	ENSMUSG00000036986.17	novel	1390	4	NA	NA	12618	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATTCGGACACCGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58142093	58136661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_58136691_58137110_58137408_58141603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026241	chr9	+	773	2	Antisense	novelGene_ENSMUSG00000036986.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCAGAGTCTGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	58137103	58142072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_58137411_58141606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026242	chr9	+	497	2	Antisense	novelGene_ENSMUSG00000036986.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCGTGGTCCAGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	58137301	58142003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_58137402_58141606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026243	chr9	+	511	2	Antisense	novelGene_ENSMUSG00000036986.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCACATCTGTGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	58137324	58142028	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_58137414_58141606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026244	chr9	+	1408	4	ISM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	3940	0	3861	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58164386	58169803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_58164508_58167509_58167706_58168080_58168297_58168928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026245	chr9	-	338	4	ISM	ENSMUSG00000036244.6	ENST00000562056.1	867	9	30	3338	30	-3338	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAGAGGGAGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	58277579	58271055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_58271151_58273902_58274007_58274135_58274244_58277548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026246	chr9	+	481	1	Genic_Genomic	ENSMUSG00000097651.3	novel	NA	NA	NA	NA	14035	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTGATACTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	58376439	58376920	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_58376400_58376900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026247	chr9	+	1304	2	FSM	ENSMUSG00000066607.6	ENSMUST00000216294.2	1601	2	297	0	297	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCGGGGCCCACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	58397187	58407063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_58397676_58406247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026248	chr9	-	1349	1	ISM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	29791	0	15295	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGGCCTGTGATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	58432929	58431580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_58431600_58432900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026249	chr9	+	3526	1	Genic_Genomic	ENSMUSG00000032336.18	novel	NA	NA	NA	NA	22591	14	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTATACCTACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	58558979	58562505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_58559000_58562500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026250	chr9	+	264	2	ISM	ENSMUSG00000032338.10	ENSMUST00000034889.10	6118	8	30065	7455	30065	-7453	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGCGCCAGTACCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	58760759	58763003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_58760828_58762807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026251	chr9	+	259	2	ISM	ENSMUSG00000032338.10	ENSMUST00000034889.10	6118	8	34336	5059	34336	-5057	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCGGCAAGAAGATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	58765030	58765399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_58765147_58765256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026252	chr9	+	249	2	ISM	ENSMUSG00000032338.10	ENSMUST00000034889.10	6118	8	35615	3793	35615	-3791	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGATCGTGCGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	58766309	58766665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_58766477_58766583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026253	chr9	+	219	1	ISM	ENSMUSG00000032338.10	ENSMUST00000034889.10	6118	8	39545	0	39545	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGCCTTACTTGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	58770239	58770458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_58770200_58770500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026254	chr9	-	1012	1	ISM	ENSMUSG00000032340.9	ENSMUST00000068664.7	7379	29	160597	146	160350	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTGGTCAAAAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58783127	58782115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_58782100_58783100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026255	chr9	-	1352	3	ISM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	155568	-146	155337	146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGCAGCATCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	58788140	58783691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_58784641_58785310_58785448_58787874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026256	chr9	-	618	1	ISM	ENSMUSG00000032340.9	ENSMUST00000068664.7	7379	29	159270	1867	159023	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAACATTGAAAAGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	58784454	58783836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_58783800_58784500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026257	chr9	-	717	3	ISM	ENSMUSG00000032340.9	ENST00000558964.5	4474	28	45723	104818	45723	-104818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTGCTTAGTCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	58897754	58889352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_58889513_58892883_58893160_58897473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026258	chr9	+	536	2	ISM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	-1	18448	-1	-18445	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCCACTCACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	59198839	59205034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59199150_59204808
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026259	chr9	+	1347	2	ISM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	22179	217	22179	-217	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCTTTTGAGCCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	59221033	59223262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59221135_59222016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026260	chr9	+	1330	1	Genic_Genomic	ENSMUSG00000025236.12	novel	NA	NA	NA	NA	23299	1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	59222153	59223483	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_59222200_59223500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026261	chr9	-	1062	2	ISM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	29917	135	29917	-135	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAGATAAGGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	59230874	59229407	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_59230266_59230670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026262	chr9	+	261	1	ISM	ENSMUSG00000025237.17	ENSMUST00000026267.16	2709	24	32725	16	32723	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGACTGGATATG	NA	NA	NA	NA	NA	NA	NA	NA	59557291	59557552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59557300_59557600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026263	chr9	+	676	4	ISM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	-1	10693	-1	-10507	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATCTAGAATAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	59563649	59575965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026264	chr9	+	394	2	NNC	ENSMUSG00000032294.18	novel	2108	9	NA	NA	44	-13826	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGAGTGTGGCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	59563694	59572646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59563933_59572490
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026265	chr9	+	588	4	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	8625	10082	8625	-10082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACACAGTCCGTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	59572480	59576390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59572650_59573145_59573238_59575831_59575964_59576195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026266	chr9	+	382	3	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	8625	-10510	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGTATCTAGAATAGCC	NA	NA	NA	NA	NA	NA	NA	NA	59572480	59575962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59572650_59573145_59573238_59575841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026267	chr9	+	403	3	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	9289	-10089	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTGGTACACAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	59573144	59576383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59573238_59575841_59575964_59576195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026268	chr9	+	688	4	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	9289	8447	9289	-8447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1366	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGACCCTTCCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	59573144	59578025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59573238_59575831_59575964_59576195_59576383_59577749
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026269	chr9	+	598	3	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	12358	7457	12358	-7457	internal_fragment	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCATTCCTTCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	59576213	59579015	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59576383_59577749_59578021_59578857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026270	chr9	+	754	4	NNC	ENSMUSG00000032294.18	novel	2108	9	NA	NA	13887	-3454	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGAGGCGGCAGTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59577742	59583018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59578021_59578857_59579013_59579203_59579357_59582850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026271	chr9	+	457	3	NNC	ENSMUSG00000032294.18	novel	2108	9	NA	NA	14999	-3461	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGGTAGGAGGCGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	59578854	59583011	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59578998_59579203_59579357_59582850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026272	chr9	+	607	4	NNC	ENSMUSG00000032294.18	novel	2108	9	NA	NA	15057	-959	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGGAAACAAGGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	59578912	59585513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59579013_59579203_59579357_59582850_59583018_59585326
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026273	chr9	+	478	4	NNC	ENSMUSG00000032294.18	novel	2108	9	NA	NA	15100	-1042	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTGTGTAAGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	59578955	59585430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59579013_59579203_59579357_59582850_59583018_59585329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026274	chr9	+	842	4	ISM	ENSMUSG00000032294.18	ENST00000389093.7	2108	9	15545	212	15441	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2036	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGAGGGTGTGGGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	59579296	59586443	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59579357_59582850_59583018_59585326_59585509_59586010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026275	chr9	+	396	3	NNC	ENSMUSG00000032294.18	novel	2108	9	NA	NA	18989	-418	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCGGGTGGCGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	59582844	59586054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59583018_59585329_59585509_59586010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026276	chr9	+	429	2	ISM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	21462	224	21462	-224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCCTCTAAAACATGCA	NA	NA	NA	NA	NA	NA	NA	NA	59585317	59586248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_59585509_59586010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026277	chr9	+	492	2	NNC	ENSMUSG00000032294.18	novel	2108	9	NA	NA	21487	-132	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATCACAGAAGGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	59585342	59586340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59585505_59586010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026278	chr9	+	414	2	NNC	ENSMUSG00000032294.18	novel	2108	9	NA	NA	21494	-202	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACCAGCTATTATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	59585349	59586270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_59585509_59586015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026279	chr9	+	495	1	Genic_Genomic	ENSMUSG00000032294.18	novel	NA	NA	NA	NA	22310	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1689	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGTTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	59586165	59586660	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_59586200_59586700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026280	chr9	-	1512	2	ISM	ENSMUSG00000051705.14	ENSMUST00000216329.2	1559	3	254	-1	254	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGGGTGTGTGGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	59657656	59643751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_59645152_59657544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026281	chr9	+	367	2	FSM	ENSMUSG00000111296.2	ENSMUST00000214235.2	364	2	-3	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGGTCCTACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	60241421	60242251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_60241603_60242065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026282	chr9	-	357	2	ISM	ENSMUSG00000047766.16	ENSMUST00000053171.14	3086	10	56133	18426	56133	-359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTAGAAAGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	60500951	60494880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_60495175_60500888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026283	chr9	+	2439	3	FSM	ENSMUSG00000034839.6	ENSMUST00000038407.6	2440	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGATTCTAGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60620272	60646084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_60620689_60631429_60631641_60644272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026284	chr9	+	2418	3	FSM	ENSMUSG00000034839.6	ENST00000299213.10	1964	3	-196	-258	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGATTCTAGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60620290	60646084	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_60620689_60631432_60631641_60644272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026285	chr9	+	511	1	ISM	ENSMUSG00000034839.6	ENSMUST00000038407.6	2440	3	25045	257	24830	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATCTGAGGTCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	60645316	60645827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_60645300_60645800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026286	chr9	-	478	2	FSM	ENSMUSG00000052143.9	ENSMUST00000214999.2	679	2	201	0	201	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTATTAGGGGGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	60745280	60728833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_60729189_60745157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026287	chr9	+	880	5	ISM	ENSMUSG00000032280.17	ENST00000557907.5	2271	18	37310	1848	37310	-1848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGAAGCCCTAGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	61318543	61322148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026288	chr9	+	1217	6	ISM	ENSMUSG00000032280.17	ENST00000558201.5	2731	18	38513	-1	38339	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCCTCATAAGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	61319572	61324259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026289	chr9	-	502	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACTGGTCTCACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	61821825	61820563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_61820804_61821169_61821245_61821638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026290	chr9	-	247	1	Genic_Genomic	ENSMUSG00000007892.9	novel	NA	NA	NA	NA	1014	2	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACTGGTCTCACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	61820810	61820563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_61820600_61820800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026291	chr9	-	288	2	ISM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	569	36	569	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTTAAGTTGGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	61821255	61820601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_61820804_61821169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026292	chr9	-	408	3	NNC	ENSMUSG00000007892.9	novel	499	3	NA	NA	20	-68	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACATGGGCTTCGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	61821804	61820633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_61820804_61821169_61821242_61821638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026293	chr9	-	705	3	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	12742	2119	12742	-2119	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGACAAGTCTTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	61832077	61828299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_61828529_61831186_61831499_61831913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026294	chr9	-	779	4	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	11868	5033	11868	-5033	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGTAGAAGAGGACCATTG	NA	NA	NA	NA	NA	NA	NA	NA	61832951	61831213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_61831499_61831913_61832094_61832251_61832426_61832811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026295	chr9	-	652	6	ISM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	770	8697	770	-8697	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGTCCTGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	61844049	61834877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026296	chr9	-	3321	1	ISM	ENSMUSG00000032252.15	ENSMUST00000034785.8	4626	3	10038	0	10038	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	61967850	61964529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_61964500_61967800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026297	chr9	-	3345	2	ISM	ENSMUSG00000032252.15	ENSMUST00000034785.8	4626	3	2132	533	2132	-533	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGGTTTGGTTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	61975756	61965062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_61968318_61975666
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026298	chr9	+	953	5	FSM	ENSMUSG00000032245.13	ENST00000637494.1	642	5	1	-312	1	312	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATCTTCTGGTGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	62746152	62758473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_62746237_62751851_62751967_62754866_62754923_62756390_62756514_62757898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026299	chr9	+	738	6	FSM	ENSMUSG00000032245.13	ENST00000566347.5	741	6	5	-2	5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGGCTTACTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	62746156	62758163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754866_62754923_62756390_62756514_62757898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026300	chr9	+	242	2	ISM	ENSMUSG00000032245.13	ENST00000564752.1	772	7	7083	3593	7083	-2089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTCAGAGAGAACCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	62753234	62754389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_62753335_62754247
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026301	chr9	+	157	2	ISM	ENSMUSG00000032245.13	ENST00000564752.1	772	7	8206	3059	8206	-1555	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGACCGGCTGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	62754357	62754923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_62754458_62754866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026302	chr9	+	592	1	ISM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	12630	0	12545	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCGTGGCTGTTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	62758696	62759288	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_62758700_62759300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026303	chr9	+	447	1	NIC	ENSMUSG00000032246.15	novel	864	5	NA	NA	17341	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAATTGGTGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	62782756	62783203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_62782800_62783200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026304	chr9	-	194	1	Genic_Genomic	ENSMUSG00000032405.11	novel	NA	NA	NA	NA	102062	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTTCTGTAAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	62785841	62785647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_62785600_62785800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026305	chr9	-	229	2	ISM	ENSMUSG00000032405.11	ENSMUST00000214830.2	2492	14	87623	9330	87361	-9330	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTCAGATGAAGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	62800542	62799491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_62799589_62800410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026306	chr9	-	228	2	ISM	ENSMUSG00000032405.11	ENSMUST00000214830.2	2492	14	60333	36471	60071	-36471	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAAGCTTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	62827832	62826632	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_62826768_62827739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026307	chr9	-	192	3	ISM	ENSMUSG00000032405.11	ENSMUST00000214830.2	2492	14	57261	37577	56999	-37577	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTCTAAAAGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	62830904	62827738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_62827831_62830562_62830611_62830852
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026308	chr9	-	246	2	ISM	ENSMUSG00000032405.11	ENSMUST00000214830.2	2492	14	28953	40705	28691	-40705	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCAGCTCCATGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62859212	62830866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_62830938_62859037
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026309	chr9	-	115	2	FSM	ENSMUSG00000022245.16	ENST00000558889.5	121	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTGAACCCAGAAACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	63047287	63046778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_63046846_63047239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026310	chr9	-	593	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTAGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	63306521	63301728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_63301958_63306157
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026311	chr9	-	1204	2	ISM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	99749	0	99749	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTTTTGTTTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	63332748	63328156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_63329252_63332639
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026312	chr9	-	1097	1	NIC	ENSMUSG00000037801.14	novel	2938	11	NA	NA	103244	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTTTTGTTTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	63329253	63328156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_63328200_63329300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026313	chr9	+	530	5	ISM	ENSMUSG00000037257.9	ENST00000542650.5	801	8	16	4258	15	-4258	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAATTTTCACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	63523982	63542669	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026314	chr9	+	424	5	ISM	ENSMUSG00000037257.9	ENST00000542650.5	801	8	2462	-1	2461	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACCCGCAGGTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	63526428	63546928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026315	chr9	+	354	4	ISM	ENSMUSG00000037257.9	ENST00000261880.10	896	9	19698	0	19698	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCAGTGCCAGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	63543665	63547587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_63543766_63546321_63546427_63546874_63546925_63547488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026316	chr9	+	1514	1	ISM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	40415	0	26389	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTGGAGACATGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	63550356	63551870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_63550400_63551900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026317	chr9	-	917	1	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	34819	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	64045342	64044425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_64044400_64045300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026318	chr9	-	932	2	ISM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	33128	70	32903	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGGTAATTCTAATACT	NA	NA	NA	NA	NA	NA	NA	NA	64047258	64044495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64045342_64047172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026319	chr9	+	871	7	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	18	1189	18	-1189	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTCCCTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	64080674	64084759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026320	chr9	+	893	7	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	1470	862	1470	-862	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAGTTTTAAAACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	64082126	64085086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026321	chr9	+	865	7	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	1817	649	1817	-649	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCAGTTTGGCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	64082473	64085299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026322	chr9	+	1155	7	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	2256	-2	2256	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTGTTCCACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	64082912	64085950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026323	chr9	+	803	4	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	3946	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTTTGTTCCACATGG	NA	NA	NA	NA	NA	NA	NA	NA	64084602	64085949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_64084760_64085002_64085087_64085182_64085300_64085504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026324	chr9	+	782	4	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	3961	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTTTGTTCCACATGG	NA	NA	NA	NA	NA	NA	NA	NA	64084617	64085949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_64084750_64085002_64085087_64085178_64085300_64085504
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026325	chr9	+	1233	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	0	-5	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGCAACCTCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	64086555	64090419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_64086703_64087780_64087871_64089423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026326	chr9	+	1222	3	NNC	ENSMUSG00000032398.8	novel	1228	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTGCCAGCAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	64086556	64090414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_64086703_64087780_64087866_64089423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026327	chr9	-	570	1	Genic_Genomic	ENSMUSG00000004936.9	novel	NA	NA	NA	NA	67293	1	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTGGCACACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	64093620	64093050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_64093000_64093600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026328	chr9	-	882	5	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	62015	484	62015	-484	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAAAGCATGCTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	64098898	64093535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026329	chr9	-	565	5	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	40940	5683	40940	-5683	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGGACTGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	64119973	64098734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026330	chr9	-	832	4	ISM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	7	19357	7	-19357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTAGCATTGCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	64160906	64112408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64112471_64119865_64120013_64121680_64121892_64160494
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026331	chr9	+	1673	6	ISM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	8105	-10	8101	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGGCTGGGCGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	64196989	64212716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026332	chr9	+	2370	2	ISM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	200518	188	200517	-188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCAAAACAAAAATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	64613824	64616293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64614796_64614894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026333	chr9	-	394	1	ISM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	22066	0	21931	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTGAGATTACATTCT	NA	NA	NA	NA	NA	NA	NA	NA	64622974	64622580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64622600_64623000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026334	chr9	-	602	3	FSM	ENSMUSG00000004771.13	ENSMUST00000167569.8	726	3	125	-1	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAGAAATAAGCTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	64644899	64623783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_64624271_64632783_64632865_64644865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026335	chr9	-	464	3	ISM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	10949	1493	10814	151	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTGTAATTCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	64634091	64624073	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64624271_64632783_64632865_64633905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026336	chr9	-	465	3	ISM	ENSMUSG00000004771.13	ENSMUST00000169058.8	462	5	9188	8571	9188	-8571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCTAACAGGTGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	64635717	64632795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64632865_64633905_64634100_64635515
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026337	chr9	-	409	3	ISM	ENSMUSG00000004771.13	ENSMUST00000169058.8	462	5	-93	9795	26	-9795	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAACTGAGAGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	64644998	64634019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64634100_64635515_64635712_64644865
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026338	chr9	+	661	3	ISM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	756	19942	756	-19359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAATGGGGTGGAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	64868974	64874048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64869281_64871607_64871886_64873971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026339	chr9	+	473	2	ISM	ENSMUSG00000034263.14	ENST00000442903.3	1468	10	19611	-151	19611	151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCCATGATAGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	64891270	64893558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64891326_64893140
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026340	chr9	+	475	1	Genic_Genomic	ENSMUSG00000034263.14	novel	NA	NA	NA	NA	22127	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGGATTTTGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	64893786	64894261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_64893800_64894300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026341	chr9	-	563	1	Genic_Genomic	ENSMUSG00000033629.7	novel	NA	NA	NA	NA	34153	5	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCTTAAACATCATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	64894822	64894259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_64894300_64894800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026342	chr9	-	811	4	ISM	ENSMUSG00000033629.7	ENST00000442729.6	1285	10	29377	-224	29376	224	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAGCACTTCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	64899599	64895300	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026343	chr9	+	671	4	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	4279	35228	4279	-35228	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGAGGATCACATACGTAC	NA	NA	NA	NA	NA	NA	NA	NA	64944282	64953044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64944524_64949545_64949659_64950967_64951142_64952901
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026344	chr9	+	829	3	ISM	ENSMUSG00000032393.16	ENSMUST00000167773.2	3142	21	45271	-344	45271	344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTATTAAGCTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	64985274	64988616	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_64985388_64985955_64986068_64988012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026345	chr9	+	679	1	Genic_Genomic	ENSMUSG00000032393.16	novel	NA	NA	NA	NA	49299	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTGGACTAGTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	64989302	64989981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_64989300_64990000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026346	chr9	+	1743	2	ISM	ENSMUSG00000041696.15	ENSMUST00000085453.6	2390	5	9915	243	9906	-243	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTAGGTCTGGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65315721	65319744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65315783_65318062
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026347	chr9	+	1729	1	Genic_Genomic	ENSMUSG00000041696.15	novel	NA	NA	NA	NA	12446	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCGTCTGATTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	65318261	65319990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_65318300_65320000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026348	chr9	+	507	1	Genic_Genomic	ENSMUSG00000059183.13	novel	NA	NA	NA	NA	16773	7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGCCCAGGGTATATGA	NA	NA	NA	NA	NA	NA	NA	NA	65359836	65360343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_65359800_65360300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026349	chr9	+	531	4	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	3	11128	3	-11128	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGTAAACCAGTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	65368237	65381002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026350	chr9	+	391	3	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	7820	8863	0	-8863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATGTGTATCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	65376054	65383267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65376219_65380919_65381001_65383121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026351	chr9	+	1013	6	FSM	ENSMUSG00000032388.8	ENST00000416889.6	1042	6	31	-2	31	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAAGCTTGGGATCATG	NA	NA	NA	NA	NA	NA	NA	NA	65376085	65394490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_65376219_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026352	chr9	+	358	4	ISM	ENSMUSG00000032388.8	ENSMUST00000213957.2	1302	8	12685	2966	4865	-2966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCTTCAAGGCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	65380919	65389164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65381001_65383121_65383268_65387660_65387770_65389142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026353	chr9	+	553	3	NNC	ENSMUSG00000032388.8	novel	1042	6	NA	NA	13153	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAAGCTTGGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	65389207	65394489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_65389251_65391723_65391859_65394114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026354	chr9	+	360	1	Genic_Genomic	ENSMUSG00000032388.8	novel	NA	NA	NA	NA	19341	3	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGGGTTTTATTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	65395395	65395755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_65395400_65395800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026355	chr9	-	990	1	ISM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	24667	0	24667	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGGCCCAAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	65462655	65461665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_65461700_65462700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026356	chr9	+	266	2	ISM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	6249	1448	6249	-1443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTCCCGAGTGCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	65500751	65501801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65500885_65501668
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026357	chr9	+	1309	3	ISM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	20996	0	20996	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	65558836	65567808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65558987_65566416_65566487_65566719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026358	chr9	+	1090	1	ISM	ENSMUSG00000032387.16	ENSMUST00000169003.8	1803	9	29790	1	28879	1	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTGATTTTTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	65566719	65567809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65566700_65567800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026359	chr9	+	1830	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	15	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGTCTTTTTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	65583844	65597583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026360	chr9	+	787	4	FSM	ENSMUSG00000040652.17	ENST00000559753.1	785	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTATGAACTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	65583874	65596728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_65584048_65595079_65595256_65596102_65596189_65596376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026361	chr9	+	159	2	NNC	ENSMUSG00000040652.17	novel	1690	4	NA	NA	60	-2294	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTCCAGGGCCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	65583934	65593526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_65584048_65593480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026362	chr9	+	220	2	ISM	ENSMUSG00000040652.17	ENST00000560258.6	1690	4	11273	1071	11266	-245	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAACTTGTCTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	65595140	65596481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65595256_65596376
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026363	chr9	+	1208	1	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	12500	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	65596374	65597582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_65596400_65597600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026364	chr9	+	1798	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	24	366	24	-366	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTTATATTTATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	65797542	65810182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026365	chr9	+	543	5	FSM	ENSMUSG00000040204.7	ENST00000558008.3	533	5	-1	-9	-1	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAATGGAGAATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	65797692	65809021	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65803734_65803791_65808839
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026366	chr9	+	1380	1	Genic_Genomic	ENSMUSG00000040204.7	novel	NA	NA	NA	NA	11486	11	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCATTTATCAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	65809179	65810559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_65809200_65810600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026367	chr9	+	345	3	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	7	3538	7	-3538	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCAGGCCCTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	65967546	65970365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65967683_65968748_65968867_65970274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026368	chr9	-	155	2	Antisense	novelGene_ENSMUSG00000032383.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGACGACGGAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	65968846	65967621	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_65967685_65968754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026369	chr9	+	397	3	ISM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	1234	950	1207	-948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAAAATGTGGAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	65968746	65972955	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65968863_65970270_65970365_65972768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026370	chr9	+	396	3	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	1207	949	1207	-949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTAAAATGTGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	65968746	65972954	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65968867_65970274_65970365_65972768
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026371	chr9	+	605	3	ISM	ENSMUSG00000032383.8	ENST00000681397.1	863	5	2733	-1	2733	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTGGGTGTGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	65970272	65973904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_65970365_65972768_65972954_65973576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026372	chr9	+	334	1	Genic_Genomic	ENSMUSG00000032383.8	novel	NA	NA	NA	NA	6036	4	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGGGCTGTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	65973575	65973909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_65973600_65973900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026373	chr9	-	942	5	ISM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	31520	0	31399	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACTGGGCATGGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	66000648	65995414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026374	chr9	+	857	4	ISM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	5915	24	5915	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATATGACACGATTC	NA	NA	NA	NA	NA	NA	NA	NA	66039807	66046213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_66039974_66040713_66040764_66043583_66043630_66045618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026375	chr9	+	611	1	Genic_Genomic	ENSMUSG00000032381.6	novel	NA	NA	NA	NA	11736	2	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCACCTTAGGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66045628	66046239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_66045600_66046200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026376	chr9	+	371	3	ISM	ENSMUSG00000032380.10	ENSMUST00000238682.2	1594	10	64	36567	64	-36567	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGGGTGCCGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	66065571	66128037	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_66065623_66072619_66072718_66127815
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026377	chr9	+	496	3	ISM	ENSMUSG00000032380.10	ENSMUST00000238682.2	1594	10	62303	10776	62303	-10776	internal_fragment	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGGGATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66127810	66153828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_66128038_66138994_66139134_66153698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026378	chr9	+	319	3	ISM	ENSMUSG00000032380.10	ENSMUST00000238682.2	1594	10	73487	6936	73487	-6936	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGGCCCGGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	66138994	66157668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_66139134_66153698_66153829_66157618
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026379	chr9	+	303	4	ISM	ENSMUSG00000032380.10	ENSMUST00000238682.2	1594	10	88248	2698	88248	-2698	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGGATACAGTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	66153755	66161906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_66153829_66157618_66157668_66158356_66158384_66161752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026380	chr9	+	321	4	ISM	ENSMUSG00000032380.10	ENSMUST00000034944.9	1772	12	96300	3292	96297	-3292	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACATGCAGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	66161804	66176232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_66161906_66162612_66162659_66175960_66176051_66176148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026381	chr9	+	467	3	ISM	ENSMUSG00000032380.10	ENSMUST00000034944.9	1772	12	110457	322	110454	-322	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCCAGAAAACTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	66175961	66179202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_66176051_66176148_66176233_66178908
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026382	chr9	+	311	1	Genic_Genomic	ENSMUSG00000032380.10	novel	NA	NA	NA	NA	113708	2	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGTTTTAGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	66179215	66179526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_66179200_66179500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026383	chr9	-	583	4	FSM	ENSMUSG00000100130.2	ENST00000559303.2	581	4	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGTGAAACAGGGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	66357954	66325582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_66325881_66355339_66355437_66355614_66355775_66357926
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026384	chr9	-	393	2	ISM	ENSMUSG00000100130.2	ENSMUST00000186450.2	554	3	340	-1	340	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAGTGAAACAGGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66355438	66325583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66325878_66355339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026385	chr9	-	301	1	FSM	ENSMUSG00000100130.2	ENSMUST00000187676.2	2896	1	2039	556	2039	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAGTGAAACAGGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66325884	66325583	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_66325600_66325900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026386	chr9	-	1829	1	Genic_Genomic	ENSMUSG00000050503.10	novel	NA	NA	NA	NA	4408	2	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGTGAGCATTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	66417483	66415654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_66415700_66417500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026387	chr9	-	2538	1	ISM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	75968	0	49731	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCCACCAGTCCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	66424456	66421918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66421900_66424500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026388	chr9	-	186	1	ISM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	74854	3466	48617	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCTATACTCACATGCT	NA	NA	NA	NA	NA	NA	NA	NA	66425570	66425384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66425400_66425600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026389	chr9	-	239	2	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	46739	307	46739	-307	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGACCATGAGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	66427448	66425691	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66425861_66427378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026390	chr9	-	181	2	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	46234	2170	46234	-2170	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAAGCCAGGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	66427953	66427554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66427669_66427886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026391	chr9	-	186	2	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	39905	2501	39905	-2501	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTGTTTCAGATAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	66434282	66427885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66428010_66434220
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026392	chr9	-	161	2	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	39684	8863	39684	-8863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGGCCAGTTTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66434503	66434247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66434302_66434396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026393	chr9	-	255	2	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	36513	9013	36513	-9013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGACATACTGACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	66437674	66434397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66434504_66437525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026394	chr9	-	244	2	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	26736	12152	26736	-12152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTGCATGTAAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	66447451	66437536	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66437673_66447343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026395	chr9	-	222	2	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	24277	21967	24277	-21967	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTAGGTGAGTATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	66449910	66447351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66447458_66449794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026396	chr9	-	198	2	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	22876	24410	22876	-24410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTACCAGAAATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	66451311	66449794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66449909_66451227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026397	chr9	-	235	3	ISM	ENSMUSG00000032376.13	ENSMUST00000174387.2	1901	14	26102	27662	1	-27634	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATTTATTCTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	66474186	66453018	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66453108_66455153_66455238_66474124
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026398	chr9	-	205	2	ISM	ENSMUSG00000032376.13	ENSMUST00000174387.2	1901	14	83	48764	83	-48736	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACATGTTTATTATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	66500205	66474120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66474186_66500065
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026399	chr9	-	1320	2	ISM	ENSMUSG00000032375.16	ENSMUST00000113730.3	682	5	10746	-1019	10746	1019	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTACTGTGAGACAA	NA	NA	NA	NA	NA	NA	NA	NA	66691912	66685455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66686663_66691799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026400	chr9	-	447	1	ISM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	19286	0	19208	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTGTGTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	66722722	66722275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66722300_66722700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026401	chr9	+	507	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	-2	-6	-2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCCTCTGCTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	66853365	66856800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026402	chr9	+	198	1	Genic_Genomic	ENSMUSG00000036781.14	novel	NA	NA	NA	NA	3229	3	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTCCCTCTGCTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	66856601	66856799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_66856600_66856800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026403	chr9	-	1385	7	ISM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	7674	-3	7581	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTCCTGTCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	66943410	66929870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026404	chr9	-	856	1	Genic_Genomic	ENSMUSG00000032366.16	novel	NA	NA	NA	NA	20265	1	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTCCTGTCGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	66930726	66929870	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_66929900_66930700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026405	chr9	-	918	2	NNC	ENSMUSG00000032366.16	novel	1714	8	NA	NA	12609	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66938382	66929871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_66930718_66938310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026406	chr9	+	918	2	Antisense	novelGene_ENSMUSG00000032366.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATTTAATTCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	66929871	66938382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_+_66930726_66938318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026407	chr9	-	679	4	ISM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	11365	383	11167	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCCTCTGGGGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66939824	66930254	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026408	chr9	-	141	1	Genic_Genomic	ENSMUSG00000032366.16	novel	NA	NA	NA	NA	15678	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTACTTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	66935313	66935172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_66935200_66935300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026409	chr9	-	199	2	ISM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	13985	6	13961	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACCTTAGGGCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	66937030	66935335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66935450_66936945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026410	chr9	-	144	2	ISM	ENSMUSG00000032366.16	ENST00000558910.3	942	8	12613	202	12609	-202	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCATGTAAATGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	66938382	66936952	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66937025_66938310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026411	chr9	-	972	7	ISM	ENSMUSG00000032366.16	ENSMUST00000030185.5	1797	9	-139	2603	5	-1982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	66956683	66938732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026412	chr9	-	502	3	ISM	ENSMUSG00000032366.16	ENST00000558910.3	942	8	-112	4405	16	-4405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTGGGTCCCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	66951107	66941155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_66941276_66943276_66943411_66950859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026413	chr9	+	1317	5	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	11806	10390	11806	-10390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGTTTTATGTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	69319574	69329056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_69319666_69322619_69322812_69322899_69323644_69324215_69324392_69328942
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026414	chr9	+	1323	5	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	14856	6422	14856	-6422	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGAAGTGCTTTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	69322624	69333024	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_69322812_69322899_69323644_69324215_69324392_69328942_69329073_69332938
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026415	chr9	+	1709	6	ISM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	11385	-6	5373	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGGTGTATACATATT	NA	NA	NA	NA	NA	NA	NA	NA	69908132	69915605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026416	chr9	+	830	3	ISM	ENSMUSG00000011958.18	ENSMUST00000165389.8	945	9	7900	-591	7900	303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTAATGTGGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	69910659	69914988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_69910748_69910850_69910950_69914345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026417	chr9	+	1261	1	Genic_Genomic	ENSMUSG00000011958.18	novel	NA	NA	NA	NA	11581	2	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTCTGGTGTATACA	NA	NA	NA	NA	NA	NA	NA	NA	69914340	69915601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_69914300_69915600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026418	chr9	+	420	4	ISM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	43	3351	22	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCTCACCTAACTAC	NA	NA	NA	NA	NA	NA	NA	NA	69919874	69926797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026419	chr9	+	739	4	ISM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	2740	44	0	-44	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCAATAAAATTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	69922571	69930104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_69922693_69924100_69924206_69926670_69926798_69929718
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026420	chr9	+	249	2	FSM	ENSMUSG00000033543.18	ENST00000484743.5	248	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCTCACCTAACTACT	NA	NA	NA	NA	NA	NA	NA	NA	69922571	69926798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_69922693_69926670
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026421	chr9	+	140	1	NIC	ENSMUSG00000033543.18	novel	893	5	NA	NA	4090	4	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCACCTAACTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	69926661	69926801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_69926700_69926800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026422	chr9	+	439	1	Genic_Genomic	ENSMUSG00000033543.18	novel	NA	NA	NA	NA	7147	9	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACCAGAAGCAGACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	69929718	69930157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_69929700_69930200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026423	chr9	+	637	1	ISM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	191762	0	191762	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	NA	NA	NA	NA	NA	NA	NA	70306411	70307048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_70306400_70307000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026424	chr9	-	933	5	ISM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	8601	-1	8494	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTATCCTGTGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	70320228	70314972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026425	chr9	-	864	6	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	8166	0	8166	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAGCCCCTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	70320556	70315215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_70315255_70316557_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026426	chr9	-	920	6	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	2531	1361	2531	-1361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCAAGTTCATCGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	70326191	70316576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026427	chr9	-	912	6	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	2333	2204	2333	-2204	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAAGGAAAATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	70326389	70317419	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026428	chr9	-	637	5	NNC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	2363	-2836	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACACCAGTTCCCAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	70326359	70318051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_70318168_70320123_70320283_70320383_70320555_70326075_70326190_70326282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026429	chr9	-	630	5	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	-76	4951	31	-4951	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTACATGTGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	70328798	70320166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026430	chr9	+	559	2	FSM	ENSMUSG00000054693.15	ENST00000561288.1	549	2	-5	-5	-5	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGAGGCTCGACCACC	NA	NA	NA	NA	NA	NA	NA	NA	70586342	70685763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_70586542_70685403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026431	chr9	+	541	2	NNC	ENSMUSG00000054693.15	novel	549	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGCTGGGAGGCTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	70586347	70685759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_70586542_70685412
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026432	chr9	+	1093	2	FSM	ENSMUSG00000054693.15	ENST00000461408.2	1304	2	5	206	5	-206	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGATGACAGCCACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	70586352	70587750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_70586542_70586846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026433	chr9	+	972	1	Genic_Genomic	ENSMUSG00000054693.15	novel	NA	NA	NA	NA	638	1	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTTAAATGTGATACAC	NA	NA	NA	NA	NA	NA	NA	NA	70586985	70587957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_70587000_70588000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026434	chr9	+	670	1	ISM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	100563	0	100494	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70686841	70687511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_70686800_70687500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026435	chr9	-	2203	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	1	-4	1	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTTCCGTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	71393216	71385714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026436	chr9	-	1940	3	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	1152	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGAGTTTCCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71391088	71385718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_71386814_71388623_71388829_71390448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026437	chr9	-	1945	3	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	1153	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGAGTTTCCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71391087	71385718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_71386820_71388623_71388829_71390448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026438	chr9	-	2146	4	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGAGTTTCCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71393165	71385718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_71386823_71388623_71388829_71390450_71391088_71392965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026439	chr9	-	725	1	ISM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	6741	33	5764	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCGAGCTCATGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	71386476	71385751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_71385800_71386500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026440	chr9	-	776	1	ISM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	268384	0	52588	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCTGAAGATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	71750745	71749969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_71750000_71750700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026441	chr9	-	2296	1	NIC	ENSMUSG00000032228.17	novel	6299	21	NA	NA	49488	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGAGTTTTTTACACTC	NA	NA	NA	NA	NA	NA	NA	NA	71753845	71751549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_71751500_71753800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026442	chr9	-	2944	5	ISM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	37102	-3	37102	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAACTAGTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	71766231	71751558	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026443	chr9	+	1063	2	FSM	ENSMUSG00000038535.18	ENSMUST00000183468.2	1834	2	82	689	82	47	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTGTTACTGTTAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	72267565	72270220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_72267624_72269215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026444	chr9	+	1083	1	ISM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	87816	0	2493	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72269976	72271059	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72270000_72271100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026445	chr9	+	318	2	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	1561	29908	1277	-1971	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGCCAGTCTGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	72601997	72625666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72602149_72625499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026446	chr9	+	2672	2	ISM	ENSMUSG00000032216.16	ENSMUST00000184333.2	4034	9	43488	-435	18729	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATTTGTGCCGTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	72619449	72628072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72619549_72625499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026447	chr9	+	275	2	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	28139	26646	27855	856	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTTACCAGCTCAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	72628575	72628928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72628701_72628778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026448	chr9	+	274	3	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	28340	21841	28056	5661	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAGATGACAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	72628776	72633733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72628944_72632298_72632365_72633692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026449	chr9	+	1958	4	ISM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	49516	-531	49232	531	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAAAGACACCCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	72649952	72656105	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72650043_72650821_72650919_72653688_72653762_72654407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026450	chr9	+	2631	1	ISM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	84876	0	53783	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	72654503	72657134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72654500_72657100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026451	chr9	+	2605	4	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	98252	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTCTGTGCAGACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	72814979	72822630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_72815146_72817918_72818024_72819185_72820088_72821198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026452	chr9	+	1432	1	ISM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	107042	1944	104470	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCTCTGTGCAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	72821197	72822629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72821200_72822600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026453	chr9	-	710	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	2	-1	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72892656	72887002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_72887479_72892422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026454	chr9	+	240	2	ISM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	14077	11511	13856	-11511	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGCAGCCAGTACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72906742	72909119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72906822_72908958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026455	chr9	+	1707	4	ISM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	16291	281	16070	-281	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTGATTCACTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	72908956	72920349	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72909158_72912922_72913175_72917578_72917695_72919211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026456	chr9	+	1159	1	NIC	ENSMUSG00000089865.3	novel	4383	16	NA	NA	53338	-2971	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATAATAGCTTCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	72919471	72920630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_72919500_72920600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026457	chr9	+	1035	2	ISM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	27200	156	27200	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCGCGCTAACATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72920086	72923126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72920609_72922613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026458	chr9	+	231	1	ISM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	28130	0	28103	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGCTTTCTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	72920989	72921220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_72921000_72921200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026459	chr9	+	360	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	1	135	1	-135	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGAAGAAAAGGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	72947000	72949926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_72947148_72949713
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026460	chr9	+	260	1	Genic_Genomic	ENSMUSG00000098332.3	novel	NA	NA	NA	NA	2804	2	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTATTTATAAAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	72949803	72950063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_72949800_72950100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026461	chr9	+	602	3	ISM	ENSMUSG00000032215.16	ENSMUST00000165177.2	597	6	3286	-333	3286	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTTTTTTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	73025163	73029997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_73025228_73028483_73028570_73029545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026462	chr9	+	487	1	Genic_Genomic	ENSMUSG00000032215.16	novel	NA	NA	NA	NA	8254	3	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATATCTCTTATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	73030131	73030618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_73030100_73030600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026463	chr9	+	3953	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	74944905	74967595	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026464	chr9	+	402	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	13	14	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCTCTACTGTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	74944971	74964106	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026465	chr9	+	464	1	ISM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	22217	0	7780	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTATTGATTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	74967112	74967576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_74967100_74967600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026466	chr9	+	538	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	10657	54179	10657	-54179	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCACAGTACAACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	75150085	75157172	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75150155_75152251_75152418_75153419_75153565_75157014
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026467	chr9	+	456	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	23683	41780	23683	-41780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGACTTTTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	75163111	75169571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75163220_75165240_75165507_75169489
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026468	chr9	+	467	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	40721	28433	40721	-28433	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGAGTGGACTTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	75180149	75182918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75180239_75180790_75181003_75182752
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026469	chr9	+	464	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	43332	26979	43332	-26979	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGGTCAGGAGAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	75182760	75184372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75182919_75183183_75183331_75184213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026470	chr9	+	408	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	43753	25751	43753	-25751	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCAGTGCTGGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	75183181	75185600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75183331_75184213_75184379_75185506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026471	chr9	+	500	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	44789	22053	44789	-22053	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCTGCCTTCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	75184217	75189298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75184379_75185506_75185601_75186617_75186682_75189117
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026472	chr9	+	435	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	46076	20083	46076	-20083	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCAGGGGCATGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	75185504	75191268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75185601_75186617_75186682_75189117_75189299_75191174
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026473	chr9	+	375	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	49734	19056	49734	-19056	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGACATTCCCTTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	75189162	75192295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75189299_75191174_75191269_75191428_75191493_75192214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026474	chr9	+	547	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	52783	14887	52783	-14887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTCTCCAACAAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	75192211	75196464	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75192296_75193692_75193874_75195330_75195489_75196340
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026475	chr9	+	415	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	55902	13133	55902	-13133	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGGGGGATAGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	75195330	75198218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75195489_75196340_75196510_75198130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026476	chr9	+	459	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	56965	9988	56965	-9988	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGGTAGCCTTGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	75196393	75201363	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75196510_75198130_75198219_75199435_75199535_75201207
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026477	chr9	+	522	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	63019	6381	63019	-6381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCACATGCCATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	75202447	75204970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75202534_75203291_75203443_75204685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026478	chr9	+	611	3	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	63861	3089	63861	-3089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCGGGCTGGCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	75203289	75208262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75203443_75204685_75204969_75208087
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026479	chr9	+	681	4	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	65255	0	65255	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGAGACTGTAGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75204683	75211351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75204969_75208087_75208263_75208685_75208767_75211211
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026480	chr9	+	1314	5	ISM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	23147	-2	23147	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAAGGGGTATCTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	75244564	75253155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026481	chr9	-	2393	1	Genic_Genomic	ENSMUSG00000042688.17	novel	NA	NA	NA	NA	20210	10	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCACCGGGTATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	75296431	75294038	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_75294000_75296400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026482	chr9	-	3975	5	ISM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	10699	-135	10699	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGGAAAGTTCCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	75305942	75294048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026483	chr9	-	899	2	ISM	ENSMUSG00000042688.17	ENST00000680777.1	4197	6	1	11216	-1	-11079	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTCACCGATCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	75317288	75305264	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_75306034_75317158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026484	chr9	+	568	3	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	4037	18089	4037	-18089	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCAGGGAGTGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	75352854	75355625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75353276_75354383_75354489_75355583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026485	chr9	+	455	4	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	7828	10656	7828	-10656	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCGCTCTTGGTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75356645	75363058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75356785_75357769_75357855_75361905_75362001_75362922
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026486	chr9	+	662	4	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	15519	1	15519	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCCTATGCTTAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75364336	75373713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_75364476_75365356_75365544_75368287_75368386_75373475
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026487	chr9	-	1929	1	Genic_Genomic	ENSMUSG00000058587.10	novel	NA	NA	NA	NA	59960	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTGTATGCCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	75406916	75404987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_75405000_75406900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026488	chr9	+	1189	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	2	-2	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCATTTCTCTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	75533024	75545055	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_75533320_75542667_75543000_75544493
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026489	chr9	-	140	1	NIC	ENSMUSG00000032355.17	novel	2921	11	NA	NA	74853	3	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTGCATAAGAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77072182	77072042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_77072000_77072200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026490	chr9	-	396	3	FSM	ENSMUSG00000032355.17	ENST00000509997.5	582	3	187	-1	187	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCATCTGCATAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	77146848	77072045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_77072176_77088587_77088679_77146673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026491	chr9	-	989	3	ISM	ENSMUSG00000032355.17	ENST00000514921.5	2602	9	13361	25940	9386	-25939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCCAGCGTGTTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	77137649	77097985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_77098020_77124258_77124331_77136766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026492	chr9	-	1398	3	ISM	ENSMUSG00000032355.17	ENST00000514921.5	2602	9	56	65366	56	-65365	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGATATAGAGAAAATACC	NA	NA	NA	NA	NA	NA	NA	NA	77150954	77137411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_77138312_77146669_77147067_77150853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026493	chr9	-	930	2	ISM	ENSMUSG00000032355.17	ENSMUST00000183955.8	3069	14	12108	128166	-14	-65711	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGAAGTCCCCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	77147049	77137757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_77138312_77146673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026494	chr9	+	3001	2	ISM	ENSMUSG00000044938.9	ENSMUST00000057781.8	6494	3	14652	2024	14652	-2024	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTCCCAAGGACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	77558433	77565385	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_77558458_77562408
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026495	chr9	+	1502	2	ISM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	37583	0	37583	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	77699399	77701767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_77699456_77700321
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026496	chr9	+	1313	3	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	62461	802	62461	-802	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACAGACACACACACACA	NA	NA	NA	NA	NA	NA	NA	NA	77887106	77890999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_77887232_77888755_77888891_77889946
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026497	chr9	+	1077	1	ISM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	66079	0	66079	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTCTGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	77890724	77891801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_77890700_77891800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026498	chr9	-	593	1	NIC	ENSMUSG00000001366.15	novel	2155	13	NA	NA	26513	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGATGGCCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	77989373	77988780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_77988800_77989400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026499	chr9	-	684	2	ISM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	23995	65	23943	-62	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTTCTGGATTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	77991943	77988845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_77989371_77991784
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026500	chr9	+	548	5	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	4	3296	4	-3296	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTTGTACACCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	78099232	78113335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026501	chr9	+	861	6	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	6321	0	6321	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	78105549	78116631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026502	chr9	+	434	2	ISM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	15845	0	15845	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	78115073	78116631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78115215_78116338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026503	chr9	+	364	3	ISM	ENSMUSG00000111709.2	ENSMUST00000217203.2	874	7	5275	1066	5275	-1066	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATGCCAGCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	78169685	78175382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78169817_78173249_78173392_78175291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026504	chr9	+	506	3	ISM	ENSMUSG00000111709.2	ENSMUST00000217203.2	874	7	8839	-1	8839	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	78173249	78176449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78173392_78175291_78175424_78176217
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026505	chr9	+	234	1	Genic_Genomic	ENSMUSG00000111709.2	novel	NA	NA	NA	NA	11805	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	78176215	78176449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_78176200_78176400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026506	chr9	-	804	6	ISM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	5216	0	5216	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	78249224	78238299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026507	chr9	+	224	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	64	24298	64	-24298	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGGACTGAGAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	78355715	78356847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78355793_78356700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026508	chr9	+	213	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	1100	24082	1100	-24082	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACCAGAGCCTGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	78356751	78357063	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78356901_78356999
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026509	chr9	+	273	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	1345	20948	1345	-20948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGGTAGGAAGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	78356996	78360197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78357118_78360045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026510	chr9	+	265	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	4532	16541	4532	-16541	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGACAGAAGCCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	78360183	78364604	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78360336_78364491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026511	chr9	+	182	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	8838	16381	8838	-16381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAAGGAATGGATTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	78364489	78364764	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78364605_78364697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026512	chr9	+	233	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	9103	15848	9103	-15848	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCACTGGCTATGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	78364754	78365297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78364889_78365198
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026513	chr9	+	252	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	9703	12911	9703	-12911	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCATACCGAATGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	78365354	78368234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78365487_78368114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026514	chr9	+	283	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	12541	12188	12541	-12188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTTCCTGTCAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	78368192	78368957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78368320_78368801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026515	chr9	+	224	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	13181	8897	13181	-8897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTAGAGAGCTCGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	78368832	78372248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78368974_78372165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026516	chr9	+	237	2	ISM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	22259	0	22259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGCAGAGCAGACAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	78377910	78381145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78378074_78381071
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026517	chr9	-	1061	4	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1895	-3	1895	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5510	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGCTGAAAGTTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	78387058	78385724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026518	chr9	-	410	1	FSM	ENSMUSG00000076138.3	ENSMUST00000102184.3	108	1	-223	-79	-223	79	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTCAATGCTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	78386140	78385730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_78385700_78386100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026519	chr9	-	596	2	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	2465	66	2465	-55	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGACCAAAAATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78386488	78385793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78386141_78386239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026520	chr9	-	955	4	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1517	503	1517	-492	internal_fragment	FALSE	canonical	NA	NA	NA	NA	1468	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTCTGCTACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	78387436	78386230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78386475_78386559_78386817_78386905_78387057_78387133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026521	chr9	-	494	2	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	2128	519	2128	-508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTGGTAAGCCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	78386825	78386246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78386475_78386559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026522	chr9	-	826	4	NNC	ENSMUSG00000037742.15	novel	1735	8	NA	NA	1520	-610	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGGAAGATGGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	78387433	78386348	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78386475_78386559_78386817_78386905_78387057_78387141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026523	chr9	-	751	4	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1246	971	1246	-960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGAGTGAAGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	78387707	78386698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78386817_78386905_78387057_78387133_78387431_78387522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026524	chr9	-	623	3	NNC	ENSMUSG00000037742.15	novel	1735	8	NA	NA	1249	-1166	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAGAATATTAAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	78387704	78386904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78387057_78387141_78387431_78387522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026525	chr9	-	579	3	NNC	ENSMUSG00000037742.15	novel	1735	8	NA	NA	1305	-1166	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAGAATATTAAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	78387648	78386904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78387057_78387133_78387431_78387518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026526	chr9	-	622	3	NNC	ENSMUSG00000037742.15	novel	1735	8	NA	NA	1260	-1166	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTAGAATATTAAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	78387693	78386904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78387057_78387133_78387431_78387520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026527	chr9	-	753	4	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	980	-1227	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTCGTCCAACTGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	78387973	78386965	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78387057_78387133_78387431_78387522_78387703_78387788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026528	chr9	-	710	4	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	26	-1395	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACTTTTAAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	78388980	78387133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78387431_78387522_78387694_78387788_78387971_78388920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026529	chr9	-	628	3	ISM	ENSMUSG00000037742.15	ENST00000610520.5	1735	8	1001	1406	1001	-1395	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACTTTTAAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	78387952	78387133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78387431_78387522_78387703_78387801
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026530	chr9	-	663	3	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	981	-1395	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACTTTTAAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	78387972	78387133	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78387431_78387520_78387703_78387788
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026531	chr9	-	676	4	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	-3	-1467	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTGACACAGTAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	78389009	78387205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78387431_78387522_78387703_78387788_78387971_78388920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026532	chr9	-	550	3	NNC	ENSMUSG00000037742.15	novel	1794	8	NA	NA	981	-1496	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCACCTACATTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	78387972	78387234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_78387431_78387522_78387703_78387798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026533	chr9	-	1548	1	Genic_Genomic	ENSMUSG00000049624.15	novel	NA	NA	NA	NA	49981	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78445316	78443768	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_78443800_78445300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026534	chr9	-	1595	2	ISM	ENSMUSG00000049624.15	ENSMUST00000117645.8	3114	11	47060	256	47060	-256	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTGCAAAGGGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	78448237	78444043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_78445582_78448180
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026535	chr9	+	325	1	ISM	ENSMUSG00000046186.9	ENSMUST00000093812.5	5860	33	100383	0	100383	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGATTTAATTTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	78623210	78623535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_78623200_78623500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026536	chr9	-	280	1	Genic_Genomic	ENSMUSG00000032332.18	novel	NA	NA	NA	NA	116481	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATGCGCCAGCCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	79509319	79509039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_79509000_79509300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026537	chr9	-	330	3	ISM	ENSMUSG00000032332.18	ENSMUST00000121227.8	9953	65	74767	38229	74565	-38229	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTGAGTCCTGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	79551235	79547269	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_79547366_79548730_79548878_79551148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026538	chr9	-	529	2	ISM	ENSMUSG00000032332.18	ENSMUST00000121227.8	9953	65	26284	82456	26082	-82456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGAGATGCCACAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	79599718	79591496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_79591749_79599441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026539	chr9	-	324	2	ISM	ENSMUSG00000032332.18	ENSMUST00000121227.8	9953	65	18229	98004	18027	-98004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGCCTTTTTAGAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	79607773	79607044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_79607134_79607538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026540	chr9	-	634	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667141	79662642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_79662882_79663558_79663644_79665771_79665862_79666921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026541	chr9	-	643	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667147	79662642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_79662888_79663558_79663641_79665771_79665862_79666921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026542	chr9	-	628	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667137	79662642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_79662888_79663558_79663644_79665771_79665850_79666917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026543	chr9	-	660	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667161	79662642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026544	chr9	-	656	4	NNC	ENSMUSG00000032330.8	novel	659	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667160	79662642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_79662888_79663561_79663644_79665771_79665862_79666921
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026545	chr9	-	1909	1	Genic_Genomic	ENSMUSG00000032328.13	novel	NA	NA	NA	NA	22581	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGCTGTTTATGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79678131	79676222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_79676200_79678100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026546	chr9	+	750	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	106	-81	106	81	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAGGATGATTAGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	81559770	81560520	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_81559800_81560500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026547	chr9	+	2054	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	104	0	104	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGATGTTGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	82711696	82729740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026548	chr9	+	1162	1	NIC	ENSMUSG00000032251.13	novel	2158	4	NA	NA	16720	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGATGTTGATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	82728578	82729740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_82728600_82729700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026549	chr9	-	1441	1	ISM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	107917	0	107917	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTACTTAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	82749652	82748211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_82748200_82749700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026550	chr9	-	703	1	Genic_Genomic	ENSMUSG00000066456.15	novel	NA	NA	NA	NA	35828	8	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTTTGTGTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	82992695	82991992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_82992000_82992700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026551	chr9	-	452	4	ISM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	31801	186	31666	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGTCCTGTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	82996857	82992186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026552	chr9	-	400	3	ISM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	34414	248	34199	-248	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCAATTTCACATCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	82994324	82992248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_82992483_82993045_82993160_82994272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026553	chr9	-	294	2	ISM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	12	10425	12	-10425	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAGCCTTTGACATC	NA	NA	NA	NA	NA	NA	NA	NA	83028726	83002425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_83002477_83028483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026554	chr9	-	2300	1	ISM	ENSMUSG00000032258.16	ENSMUST00000034791.15	4160	8	45309	0	45309	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	83277771	83275471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_83275500_83277800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026555	chr9	-	2298	2	ISM	ENSMUSG00000032258.16	ENSMUST00000034791.15	4160	8	42385	470	42385	-470	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTTCTTAAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	83280695	83275941	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_83278109_83280564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026556	chr9	+	553	1	FSM	ENSMUSG00000058838.10	ENSMUST00000078766.10	467	1	-38	-48	-38	48	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACATTATTACATTATT	NA	NA	NA	NA	NA	NA	NA	NA	83291674	83292227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_83291700_83292200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026557	chr9	-	1467	1	ISM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	26094	0	26094	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCCGTCGTTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	83662211	83660744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_83660700_83662200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026558	chr9	+	473	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	1	26056	1	-26056	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTCCAAGGGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	83721244	83725277	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83721467_83721778_83721886_83725133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026559	chr9	+	340	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	561	25538	561	-25538	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAAGTGCATTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	83721804	83725795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83721886_83725133_83725278_83725680
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026560	chr9	+	372	4	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	3937	25147	3937	-25147	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAAGGTATGTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	83725180	83726186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83725278_83725680_83725796_83725936_83726010_83726099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026561	chr9	+	254	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	4692	23283	4692	-23283	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGCGACTGTAAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	83725935	83728050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83726010_83726099_83726195_83727965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026562	chr9	+	299	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	4855	22028	4855	-22028	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTGTTCGCGTAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	83726098	83729305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83726195_83727965_83728051_83729187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026563	chr9	+	342	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	6720	18572	6720	-18572	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCTCTGTTCACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	83727963	83732761	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83728051_83729187_83729306_83732624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026564	chr9	+	391	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	7945	16105	7945	-16105	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTACCTTTTGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	83729188	83735228	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83729306_83732624_83732762_83735091
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026565	chr9	+	433	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	11369	14331	11369	-14331	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCGTAGTTAAGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	83732612	83737002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83732762_83735091_83735229_83736855
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026566	chr9	+	328	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	13886	11865	13886	-11865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAAATGAATAGATATCC	NA	NA	NA	NA	NA	NA	NA	NA	83735129	83739468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83735229_83736855_83736994_83739377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026567	chr9	+	346	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	15648	6961	15648	-6961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATTCATTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	83736891	83744372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83736994_83739377_83739464_83744214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026568	chr9	+	411	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	18134	6666	18134	-6666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATACACGTAAAGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	83739377	83744667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83739464_83744214_83744373_83744500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026569	chr9	+	373	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	23042	5702	23042	-5702	internal_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTCTTGGTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	83744285	83745631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83744373_83744500_83744653_83745497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026570	chr9	+	346	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	23274	4117	23274	-4117	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGAGCGCTCCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	83744517	83747216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83744653_83745497_83745623_83747130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026571	chr9	+	384	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	24253	1061	24253	-1061	internal_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACATAGCACTATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	83745496	83750272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83745623_83747130_83747212_83750095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026572	chr9	+	350	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	25885	615	25885	-615	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTCAAAGGTTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	83747128	83750718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83747212_83750095_83750273_83750628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026573	chr9	+	344	3	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	28868	0	28868	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCATGTACATTACT	NA	NA	NA	NA	NA	NA	NA	NA	83750111	83751333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83750273_83750628_83750714_83751235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026574	chr9	+	192	2	ISM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	29376	0	29376	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCATGTACATTACT	NA	NA	NA	NA	NA	NA	NA	NA	83750619	83751333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_83750714_83751235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026575	chr9	+	100	1	NIC	ENSMUSG00000038379.16	novel	2731	21	NA	NA	29990	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGCATGTACATTACT	NA	NA	NA	NA	NA	NA	NA	NA	83751233	83751333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_83751200_83751300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026576	chr9	+	898	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	-26	-74	-26	74	mono-exon	FALSE	NA	NA	NA	NA	NA	1636	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGTGGAGACATGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	84306010	84306908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_84306000_84306900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026577	chr9	-	928	4	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	51912	0	51912	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGAGATGTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85579310	85569983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026578	chr9	-	989	4	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	5109	44730	5109	-44730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGCCATGGAGATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	85626113	85614713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_85614795_85617027_85617153_85619520_85619618_85625427
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026579	chr9	-	786	3	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	9	49563	9	-49563	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATGTTGTATTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	85631213	85619546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_85619618_85625427_85626113_85631183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026580	chr9	+	3486	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	-3	-2	-3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCAGGTTATGAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	85724914	85729095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_85725009_85725703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026581	chr9	+	3425	2	NNC	ENSMUSG00000035274.14	novel	3481	2	NA	NA	48	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCAGGTTATGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	85724965	85729093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_85725001_85725703
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026582	chr9	+	3398	1	Genic_Genomic	ENSMUSG00000035274.14	novel	NA	NA	NA	NA	779	1	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCAGGTTATGAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	85725696	85729094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_85725700_85729100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026583	chr9	+	819	2	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	22093	42665	22093	-41486	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACATCAGAGTCACATT	NA	NA	NA	NA	NA	NA	NA	NA	86389552	86395194	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_86389791_86394613
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026584	chr9	+	831	2	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	27174	41750	27174	-40571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAACCTGAAGTATATAG	NA	NA	NA	NA	NA	NA	NA	NA	86394633	86396109	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_86395233_86395877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026585	chr9	+	1053	2	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	32745	35143	32745	-33964	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAGAAAAAAGCTGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	86400204	86402716	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_86400467_86401925
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026586	chr9	+	1021	3	ISM	ENSMUSG00000034973.17	ENSMUST00000034987.15	8933	37	35657	32740	35657	-31561	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCTTCAGAAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	86403116	86405119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_86403913_86404815_86404928_86405006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026587	chr9	-	1428	4	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	13329	0	13329	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGTGTGTTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86440551	86436429	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026588	chr9	-	1361	1	NIC	ENSMUSG00000032418.16	novel	2388	15	NA	NA	104546	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTAAATGTCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86464784	86463423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_86463400_86464800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026589	chr9	-	1594	3	ISM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	92657	184	92657	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCCTTGAAGGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	86476673	86463642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86464961_86469015_86469115_86476496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026590	chr9	-	1127	1	Genic_Genomic	ENSMUSG00000033419.17	novel	NA	NA	NA	NA	113366	1	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCTTTCTGTCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	86649101	86647974	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_86648000_86649100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026591	chr9	-	1329	4	ISM	ENSMUSG00000033419.17	ENSMUST00000074468.13	4336	30	106207	326	106172	-326	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTTGTCATACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	86656295	86648314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026592	chr9	-	421	4	ISM	ENSMUSG00000033419.17	ENSMUST00000074501.12	2577	20	96985	8904	96985	-8904	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAACTAGTCATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	86665482	86657634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86657745_86659086_86659118_86663622_86663773_86665352
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026593	chr9	-	425	3	ISM	ENSMUSG00000033419.17	ENSMUST00000036347.13	4237	29	87708	26018	87673	-25276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCTTCCCCTAGATC	NA	NA	NA	NA	NA	NA	NA	NA	86674794	86674006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86674079_86674216_86674295_86674519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026594	chr9	-	419	3	NNC	ENSMUSG00000033419.17	novel	4150	26	NA	NA	87673	-25279	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGAGTGCTTCCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	86674794	86674009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_86674079_86674216_86674295_86674522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026595	chr9	-	419	3	ISM	ENSMUSG00000033419.17	ENSMUST00000036347.13	4237	29	86983	26267	86948	-25525	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGACGCGGCTCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	86675519	86674255	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86674295_86674519_86674790_86675409
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026596	chr9	-	516	3	ISM	ENSMUSG00000033419.17	ENSMUST00000036347.13	4237	29	81783	26522	81748	-25780	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTACTCAATCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86680719	86674510	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86674790_86675409_86675518_86680590
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026597	chr9	-	418	4	ISM	ENSMUSG00000033419.17	ENSMUST00000074501.12	2577	20	40760	69948	40760	-69948	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTACCTCATGTGAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	86721707	86718678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86718775_86720083_86720187_86720844_86720921_86721564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026598	chr9	-	446	3	ISM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	39	73647	0	-72892	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTGGTATTTAAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	86762492	86721622	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_86721708_86761474_86761635_86762291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026599	chr9	+	827	2	ISM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	44633	287	44633	-287	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGGCTATGTATACC	NA	NA	NA	NA	NA	NA	NA	NA	86948699	86959540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_86948867_86958880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026600	chr9	+	710	1	Genic_Genomic	ENSMUSG00000032872.17	novel	NA	NA	NA	NA	55052	1	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGACTAGGTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	86959118	86959828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_86959100_86959800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026601	chr9	+	140	1	FSM	ENSMUSG00002076616.1	ENSMUST00020183641.1	134	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCTTTAGGAGTAAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	87082161	87082301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_87082200_87082300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026602	chr9	-	217	2	ISM	ENSMUSG00000032419.9	ENSMUST00000034991.8	4679	8	593	26782	593	-26782	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACGACCGGGGACCCCG	NA	NA	NA	NA	NA	NA	NA	NA	87612720	87611634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_87611719_87612587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026603	chr9	-	439	5	ISM	ENSMUSG00000032422.19	ENST00000682682.1	2799	28	56700	-2	40909	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAATAAAAAGTGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	88264163	88258831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88264130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026604	chr9	-	494	5	ISM	ENSMUSG00000032422.19	ENST00000682682.1	2799	28	54930	2726	39139	-2726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGAAGCAGGAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88265933	88261559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88261620_88262222_88262315_88263534_88263631_88264130_88264255_88265811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026605	chr9	-	414	4	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	41132	2728	41132	-2728	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGGAAGCAGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	88263940	88261561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88261620_88262222_88262315_88263534_88263631_88263772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026606	chr9	-	395	3	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	40816	4693	40816	-4693	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATAACTCAATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	88264256	88263526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88263631_88263772_88263938_88264130
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026607	chr9	-	411	3	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	39139	4939	39139	-4939	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATGACCATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88265933	88263772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88263938_88264130_88264255_88265811
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026608	chr9	-	462	5	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	35705	5336	35705	-5336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTGGACGGAGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	88269367	88264169	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026609	chr9	-	456	4	ISM	ENSMUSG00000032422.19	ENST00000681981.1	2880	28	44242	7189	28451	-7189	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATTATGAATTAATATA	NA	NA	NA	NA	NA	NA	NA	NA	88276621	88266022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88266064_88267772_88267885_88269263_88269365_88276419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026610	chr9	-	413	3	ISM	ENSMUSG00000032422.19	ENST00000681981.1	2880	28	40438	10454	24647	-10454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGTTCCAGGAGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	88280425	88269287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88269365_88276419_88276622_88280291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026611	chr9	+	488	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	54	-61	54	61	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATAAGCTACACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88272943	88273431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_88272900_88273400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026612	chr9	-	412	3	NNC	ENSMUSG00000032422.19	novel	2676	25	NA	NA	21039	-17589	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAGAGTTCTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	88284033	88276422	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_88276622_88280291_88280425_88283953
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026613	chr9	-	310	3	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	22267	17641	22267	-17641	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGAGAATTCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88282805	88276474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88276622_88280291_88280425_88282775
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026614	chr9	-	292	3	NNC	ENSMUSG00000032422.19	novel	2676	25	NA	NA	20795	-21458	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTGAAAACATTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	88284277	88280291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_88280425_88283953_88284032_88284196
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026615	chr9	-	368	4	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	19598	23942	19598	-23942	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCTGGGCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	88285474	88282775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88282803_88283972_88284032_88284196_88284322_88285317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026616	chr9	-	477	4	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	18428	25363	18428	-25363	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCAGGCTTCTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	88286644	88284196	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88284322_88285317_88285474_88286356_88286472_88286563
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026617	chr9	-	316	4	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	18276	26565	18276	-26565	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTATAAGACCTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	88286796	88285398	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88285474_88286356_88286472_88286563_88286645_88286751
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026618	chr9	-	364	4	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	15535	27727	15535	-27727	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTTCAGCATTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	88289537	88286560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88286645_88286751_88286797_88287292_88287369_88289378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026619	chr9	-	323	3	ISM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	12375	28456	12375	-28456	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTACATTTTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88292697	88287289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88287369_88289378_88289536_88292610
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026620	chr9	-	374	4	ISM	ENSMUSG00000092541.8	ENSMUST00000173131.8	889	9	40899	-104	40899	104	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTATAAACGCACTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88297770	88289380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88289536_88292610_88292696_88295533_88295622_88297724
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026621	chr9	-	297	4	ISM	ENSMUSG00000092541.8	ENSMUST00000173131.8	889	9	36286	3126	36286	-3126	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACAGTTTTCCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	88302383	88292610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88292696_88295533_88295622_88297724_88297769_88302303
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026622	chr9	-	282	3	ISM	ENSMUSG00000092541.8	ENSMUST00000173131.8	889	9	33595	12817	33595	-12817	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAATTTAATTAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	88305074	88302301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88302383_88302801_88302879_88304950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026623	chr9	-	319	3	ISM	ENSMUSG00000032422.19	ENST00000515216.6	2931	29	11	43979	11	-43979	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGCATAGGTAAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88320852	88302812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88302879_88304950_88305072_88320720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026624	chr9	-	369	1	ISM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	35182	0	33376	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAGGTATTTTCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	88329430	88329061	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88329100_88329400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026625	chr9	-	769	2	ISM	ENSMUSG00000092541.8	ENSMUST00000173131.8	889	9	181	46165	181	-46165	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAAATCTTTGTAGATA	NA	NA	NA	NA	NA	NA	NA	NA	88338488	88335649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88336346_88338415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026626	chr9	-	1171	5	ISM	ENSMUSG00000032423.13	ENST00000677059.1	2166	12	18323	-1	17591	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTAGATTTTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	88345215	88335986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88336349_88338453_88338783_88343722_88343845_88344288_88344439_88345007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026627	chr9	-	363	1	NIC	ENSMUSG00000092541.8	novel	889	9	NA	NA	2320	-46502	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTAGATTTTTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	88336349	88335986	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_88336000_88336300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026628	chr9	-	656	1	ISM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	26322	0	24520	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTACAATTCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88338286	88337630	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88337600_88338300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026629	chr9	-	767	2	ISM	ENSMUSG00000032423.13	ENSMUST00000174361.8	1767	10	18968	-59	18968	59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAAGGGTGCCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	88343838	88338131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88338783_88343722
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026630	chr9	-	438	2	ISM	ENSMUSG00000032423.13	ENST00000678816.1	2323	9	19048	918	17591	-362	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGCTGCTCCATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	88345215	88338552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88338783_88345007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026631	chr9	-	343	2	ISM	ENSMUSG00000032423.13	ENSMUST00000174361.8	1767	10	15968	6818	15968	-6818	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTTTACAATAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	88346838	88345008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88345214_88346700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026632	chr9	-	297	2	ISM	ENSMUSG00000032423.13	ENSMUST00000174361.8	1767	10	3804	8510	3804	-8510	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTGGATTTAATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	88359002	88346700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88346837_88358841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026633	chr9	-	334	3	ISM	ENSMUSG00000032423.13	ENSMUST00000174361.8	1767	10	1140	20651	1140	-20651	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGGTTTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	88361666	88358841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88359019_88359126_88359241_88361623
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026634	chr9	-	294	3	ISM	ENSMUSG00000032423.13	ENSMUST00000174361.8	1767	10	863	20961	863	-20961	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGCCTTCTGTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	88361943	88359151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88359241_88361623_88361732_88361846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026635	chr9	-	408	3	NNC	ENSMUSG00000032423.13	novel	2323	9	NA	NA	52	-23656	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTTAATTTCATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	88363486	88361846	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_88361966_88362658_88362819_88363357
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026636	chr9	-	279	2	ISM	ENSMUSG00000032423.13	ENST00000678816.1	2323	9	15	25045	1	-24489	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGAAATTTACGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	88364248	88362679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88362819_88364108
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026637	chr9	-	1213	3	ISM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	0	867	0	-851	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTGCTCTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	88405615	88403969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88404029_88404359_88404435_88404536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026638	chr9	+	750	1	Genic_Genomic	ENSMUSG00000032425.16	novel	NA	NA	NA	NA	22130	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTGAGTAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	88452365	88453115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_88452400_88453100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026639	chr9	-	406	1	Genic_Genomic	ENSMUSG00000079427.11	novel	NA	NA	NA	NA	30595	15	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGAATATTAATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	88571045	88570639	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_88570600_88571000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026640	chr9	-	785	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	22	-6	22	6	multi-exon	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAGAAATTATTAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	88601844	88570648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_88571039_88597540_88597803_88601711
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026641	chr9	+	620	1	FSM	ENSMUSG00000101698.2	ENSMUST00000190113.2	904	1	284	0	284	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTGTTGTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	88709858	88710478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_88709900_88710500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026642	chr9	-	370	2	ISM	ENSMUSG00000097177.9	ENSMUST00000181448.3	602	5	1037	2	968	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATTGGTTATGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	88739886	88739286	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_88739637_88739866
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026643	chr9	+	730	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	86	0	86	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGAATATTAATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	89093295	89122293	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_89093365_89097261_89097524_89121894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026644	chr9	-	607	1	Genic_Genomic	ENSMUSG00000032353.10	novel	NA	NA	NA	NA	5258	2	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGAGTGATGTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	89581863	89581256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_89581300_89581900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026645	chr9	-	850	2	ISM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	2038	183	2038	-183	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAAGGGACCCTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	89585083	89581441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_89582033_89584824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026646	chr9	-	878	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	0	468	0	-468	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGAAGAGGGAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	89587121	89581726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_89582033_89584824_89585074_89586798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026647	chr9	+	432	2	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	57	111162	57	-5561	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGAGCGCCGCGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	89791837	89792326	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89791875_89791931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026648	chr9	+	670	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	174	70488	-6	35100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACAAAGCCGGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	89791954	89833000	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89792327_89806113_89806224_89826778_89826927_89832960
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026649	chr9	+	349	2	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	41181	67325	41000	38263	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCGGAAGGGACGATGA	NA	NA	NA	NA	NA	NA	NA	NA	89832961	89836163	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89833057_89835909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026650	chr9	+	433	3	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	44204	50909	44023	-50909	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTACCCAATGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	89835984	89852579	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89836164_89849903_89849984_89852405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026651	chr9	+	415	4	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	65100	39701	64919	-39701	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGCAGCTTCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	89856880	89863787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89856937_89858736_89858898_89862799_89862864_89863653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026652	chr9	+	536	2	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	81841	26387	81660	-26387	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGGATACATGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	89873621	89877101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89873780_89876723
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026653	chr9	+	573	3	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	84952	20640	84771	-20640	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACTTCTGCCTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	89876732	89882848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89877101_89880719_89880843_89882766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026654	chr9	+	402	3	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	88939	19526	88758	-19526	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGGTGAGACTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	89880719	89883962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89880843_89882766_89882941_89883857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026655	chr9	+	793	5	ISM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	12759	0	12759	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGCGTAGGTCTCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	89949078	89958142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_89949162_89950457_89950527_89953871_89953979_89956920_89957047_89957734
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026656	chr9	-	1187	5	ISM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	18111	0	18111	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGCCGTGTTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	89978657	89973717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026657	chr9	+	715	4	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	59	22228	59	-22124	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGGTCACATAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	90053596	90059919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_90053883_90055674_90055841_90056524_90056704_90059835
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026658	chr9	+	672	4	ISM	ENSMUSG00000032363.16	ENST00000613213.4	4431	19	14647	8998	14647	-8894	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCTAGGGGCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	90070323	90073149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_90070492_90070711_90070846_90071671_90071793_90072900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026659	chr9	+	1026	3	ISM	ENSMUSG00000032363.16	ENST00000613213.4	4431	19	18209	6514	18209	-6410	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGACACCTGTTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	90073885	90075633	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_90074016_90074433_90074648_90074951
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026660	chr9	+	1019	3	ISM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	22093	4244	19954	-4140	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTTGGGCCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	90075630	90077903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_90076323_90077210_90077364_90077729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026661	chr9	+	829	4	ISM	ENSMUSG00000032363.16	ENST00000613213.4	4431	19	22089	0	22089	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGAGTGGTTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	90077765	90082147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_90077904_90077983_90078131_90079052_90079216_90081766
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026662	chr9	+	827	3	FSM	ENSMUSG00000036972.15	ENST00000491672.5	829	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGTGTGTTCGGGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	91250853	91266382	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_91251280_91254660_91254746_91266066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026663	chr9	+	335	2	ISM	ENSMUSG00000036972.15	ENSMUST00000173933.8	1764	5	1393	7926	1389	-5297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCGCACCCCATGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	91254658	91261085	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_91254746_91260837
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026664	chr9	+	1714	3	FSM	ENSMUSG00000036972.15	ENST00000473123.5	1242	3	1	-473	1	353	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGCTTTGGCACCCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	91260838	91269364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_91261456_91266066_91266387_91268587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026665	chr9	+	1127	3	NNC	ENSMUSG00000036972.15	novel	1242	3	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGCGAATGGGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	91260956	91268891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_91261460_91266066_91266387_91268587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026666	chr9	+	1109	3	FSM	ENSMUSG00000036972.15	ENSMUST00000066384.7	3891	3	272	2510	129	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGCGAATGGGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	91260966	91268891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_91261456_91266066_91266383_91268587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026667	chr9	+	808	1	ISM	ENSMUSG00000036972.15	ENSMUST00000066384.7	3891	3	9723	176	9580	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATTTGTCAGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	91270417	91271225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_91270400_91271200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026668	chr9	+	914	2	FSM	ENSMUSG00000100341.2	ENST00000659452.1	1822	2	1	907	1	-907	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCAGGGCGCTTCACG	NA	NA	NA	NA	NA	NA	NA	NA	91286576	91287607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_91286674_91286790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026669	chr9	+	868	1	Genic_Genomic	ENSMUSG00000100341.2	novel	NA	NA	NA	NA	1075	4	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGCGGACAACAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	91287650	91288518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_91287600_91288500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026670	chr9	+	909	3	ISM	ENSMUSG00000032369.14	ENSMUST00000186364.2	1471	9	16404	-172	16404	-131	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATACCAGTATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	92148798	92154200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_92148927_92151867_92152030_92153581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026671	chr9	+	587	1	Genic_Genomic	ENSMUSG00000032369.14	novel	NA	NA	NA	NA	21353	3	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGGCTCCTGTATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	92153747	92154334	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_92153700_92154300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026672	chr9	+	196	1	ISM	ENSMUSG00000032372.15	ENSMUST00000034932.14	1874	8	21934	0	7964	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGTGTACTTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	92179588	92179784	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_92179600_92179800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026673	chr9	+	742	2	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	32585	1108	32585	-1108	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATACCCTCAACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	92372010	92373401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_92372164_92372812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026674	chr9	+	732	1	ISM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	34352	0	34352	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGTGTTTTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92373777	92374509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_92373800_92374500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026675	chr9	+	1240	3	ISM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	64251	372	64251	-372	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTTTTTAAAGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	92488567	92490101	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_92488708_92488816_92488943_92489127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026676	chr9	+	1033	1	ISM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	65173	0	65132	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	92489448	92490481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_92489400_92490500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026677	chr9	-	851	1	ISM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	19367	0	18483	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTACTCTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	94400767	94399916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_94399900_94400800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026678	chr9	-	1658	3	FSM	ENSMUSG00000045414.8	ENST00000495414.5	1650	3	0	-8	0	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCACTGCATCCTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	94419250	94401634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_94402700_94406444_94406749_94418961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026679	chr9	-	1606	3	NNC	ENSMUSG00000045414.8	novel	1650	3	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAAAACGTCACTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	94419209	94401642	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_94402700_94406444_94406749_94418964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026680	chr9	+	1479	2	ISM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	557279	235	557279	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTCTCAGGCCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	95109240	95112263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_95109347_95110890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026681	chr9	+	1486	1	ISM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	559051	0	559051	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCATTGGCTATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	95111012	95112498	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_95111000_95112500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026682	chr9	-	321	1	Genic_Genomic	ENSMUSG00000032407.15	novel	NA	NA	NA	NA	54668	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTTGGTGTGCTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	95339270	95338949	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_95338900_95339300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026683	chr9	-	361	3	ISM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	39713	2957	39713	-2957	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGCATATGATAGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	95354225	95346414	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_95346535_95348598_95348710_95354095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026684	chr9	+	1992	6	FSM	ENSMUSG00000015354.9	ENST00000485766.1	927	6	4	-1069	4	679	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTGTCTCCATCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	95520706	95578217	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95576676_95576845_95577018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026685	chr9	+	875	6	NNC	ENSMUSG00000015354.9	novel	927	6	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGAGCTCTGTCACATAA	NA	NA	NA	NA	NA	NA	NA	NA	95520747	95577148	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_95520814_95552057_95552314_95560397_95560523_95563592_95563723_95576676_95576845_95577018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026686	chr9	+	1235	3	ISM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	55268	2140	54219	471	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGATGCTTAGGCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	95574921	95578009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_95574998_95576676_95576845_95577018
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026687	chr9	+	1228	1	Genic_Genomic	ENSMUSG00000015354.9	novel	NA	NA	NA	NA	58220	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACATAATACCAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95578922	95580150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_95578900_95580200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026688	chr9	-	335	1	Genic_Genomic	ENSMUSG00000032412.9	novel	NA	NA	NA	NA	12908	3	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACACATGATGGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96215039	96214704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_96214700_96215000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026689	chr9	-	777	2	FSM	ENSMUSG00000032412.9	ENST00000462082.1	765	2	-10	-2	-10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATCTGAAAGTAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	96227957	96215110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_96215748_96227817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026690	chr9	-	638	1	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	12198	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATCTGAAAGTAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	96215749	96215111	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_96215100_96215700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026691	chr9	-	601	4	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	24059	756	5511	-351	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTGACATCATAACATG	NA	NA	NA	NA	NA	NA	NA	NA	96222436	96215463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026692	chr9	-	388	4	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	21065	2766	2517	-2361	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGACTTAAAGTATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	96225430	96217473	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96217516_96220711_96220763_96222254_96222440_96225320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026693	chr9	-	417	3	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	18548	7553	0	-7148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGTACGTACTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	96227947	96222260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96222440_96225320_96225429_96227817
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026694	chr9	-	526	3	ISM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	108	10613	108	-10208	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTGCAGGCCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	96246387	96225320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96225429_96227817_96227947_96246098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026695	chr9	-	774	1	Genic_Genomic	ENSMUSG00000051234.7	novel	NA	NA	NA	NA	6902	2	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTATTTGGCGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	96353761	96352987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_96353000_96353800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026696	chr9	-	1057	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	0	175	0	-175	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGTATTGTATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	96360728	96353164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_96353906_96356010_96356059_96360460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026697	chr9	+	695	1	FSM	ENSMUSG00000101615.2	ENSMUST00000188740.2	694	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCTGGGCTAGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	96419213	96419908	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_96419200_96419900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026698	chr9	-	1323	1	Genic_Genomic	ENSMUSG00000040433.17	novel	NA	NA	NA	NA	47584	1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAAGTGTCTTTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	96566144	96564821	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_96564800_96566100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026699	chr9	-	1968	1	ISM	ENSMUSG00000043587.16	ENSMUST00000112951.9	3118	7	64103	7	64103	1	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTACAGCTTACGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96707363	96705395	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96705400_96707400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026700	chr9	-	2015	2	ISM	ENSMUSG00000043587.16	ENSMUST00000119141.8	2768	7	60370	156	60350	-156	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGGAGGCCAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	96711116	96705794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96707676_96710982
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026701	chr9	+	714	1	FSM	ENSMUSG00000062933.8	ENSMUST00000075723.7	490	1	8	-232	8	232	mono-exon	FALSE	NA	NA	NA	NA	NA	4080	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACAAACACCACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	96777718	96778432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_96777700_96778400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026702	chr9	-	1257	2	ISM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	219	52114	219	-52114	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACATCAACGGCCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	96900677	96877648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96878475_96900246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026703	chr9	-	1841	1	ISM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	34356	0	7669	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	96958854	96957013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96957000_96958900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026704	chr9	-	1889	2	ISM	ENSMUSG00000032449.14	ENSMUST00000035024.8	4043	3	3985	2079	3985	-2079	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGGCAGAAGCAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	96962538	96959696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_96961293_96962245
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026705	chr9	+	333	2	ISM	ENSMUSG00000032456.14	ENST00000512391.5	393	3	1	10496	1	-10496	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGAGTCGTGTGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	98236069	98281693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98236218_98281508
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026706	chr9	+	741	2	ISM	ENSMUSG00000032456.14	ENST00000413939.6	1246	3	3	751	3	245	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCATGGTTGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	98236071	98292724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98236218_98292129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026707	chr9	+	1347	4	NNC	ENSMUSG00000032456.14	novel	1363	4	NA	NA	1	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATCAAAAATACTAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	98281507	98293465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_98281693_98285586_98285667_98292129_98292985_98293238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026708	chr9	+	1364	4	FSM	ENSMUSG00000032456.14	ENST00000339837.9	1363	4	1	-2	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGAAAAGTTTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	98281507	98293477	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_98281693_98285586_98285667_98292129_98292985_98293233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026709	chr9	+	279	2	FSM	ENSMUSG00000032456.14	ENST00000511444.5	536	2	7	250	7	40	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGGCTTGGTGTGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	98281513	98292229	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_98281693_98292129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026710	chr9	-	111	2	Antisense	novelGene_ENSMUSG00000032456.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCAGGGCCAGCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	98292171	98281620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_98281688_98292127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026711	chr9	+	137	1	ISM	ENSMUSG00000032456.14	ENSMUST00000112935.8	2166	5	113707	1008	10836	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGACTGGCTAGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	98292342	98292479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98292300_98292500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026712	chr9	+	595	2	NNC	ENSMUSG00000032456.14	novel	1246	3	NA	NA	11120	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTAATGAAAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	98292626	98293472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_98292985_98293235
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026713	chr9	-	320	1	FSM	ENSMUSG00000051074.5	ENSMUST00000058992.3	652	1	337	-5	318	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAATACATTGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	98445327	98445007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_98445000_98445300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026714	chr9	+	398	3	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	7762	14216	7762	-14216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTAGAGGCTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	98453545	98456219	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98453696_98455487_98455635_98456118
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026715	chr9	+	574	4	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	9722	10853	9722	-10853	internal_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGTCAGTGACATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	98455505	98459582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98455635_98456118_98456219_98459010_98459154_98459380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026716	chr9	+	415	3	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	17423	5534	17423	-5534	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCCCAAAGAACAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	98463206	98464901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98463332_98464324_98464456_98464742
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026717	chr9	+	414	3	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	18577	3289	18577	-3289	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTTTAATCCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	98464360	98467146	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98464456_98464742_98464951_98467035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026718	chr9	+	504	3	ISM	ENSMUSG00000032458.7	ENST00000507777.6	3055	22	23880	-2	23849	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATCTCACTCGGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	98469632	98470491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98469674_98469813_98469883_98470097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026719	chr9	+	397	1	Genic_Genomic	ENSMUSG00000032458.7	novel	NA	NA	NA	NA	24311	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATCTCACTCGGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	98470094	98470491	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_98470100_98470500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026720	chr9	+	475	3	ISM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	27	9280	26	-9008	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCAGGGCTGTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	98868452	98874794	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98868566_98874153_98874287_98874565
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026721	chr9	+	408	3	ISM	ENSMUSG00000032463.11	ENSMUST00000112911.9	803	6	5724	2740	5724	-2740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCGGTAAGTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	98874150	98881062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98874287_98874565_98874795_98881019
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026722	chr9	+	652	3	ISM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	6166	68	6165	-68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCCACAACAGTAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	98874591	98884006	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98874795_98881019_98881070_98883607
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026723	chr9	+	426	1	ISM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	15223	0	15222	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGTTTGGTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	98883648	98884074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_98883600_98884100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026724	chr9	-	1759	4	ISM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	19417	-1	19417	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTGTTTGGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	98926844	98920470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026725	chr9	+	129	1	ISM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	56834	0	56813	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	99182328	99182457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_99182300_99182500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026726	chr9	-	638	4	FSM	ENSMUSG00000032470.18	ENST00000423968.7	634	4	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGCCTGCATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	99318821	99274994	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_99275099_99276521_99276676_99293445_99293656_99318651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026727	chr9	-	605	4	FSM	ENSMUSG00000032470.18	ENST00000289104.8	606	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGGCTGTGCCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	99319077	99274998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_99275099_99276521_99276676_99293445_99293656_99318936
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026728	chr9	-	630	4	NNC	ENSMUSG00000032470.18	novel	634	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGGCTGTGCCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	99318820	99274998	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_99275099_99276521_99276676_99293445_99293656_99318654
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026729	chr9	+	241	2	ISM	ENSMUSG00000046242.9	ENST00000317876.8	716	6	1	10267	1	-10267	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGGAGCCACCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	99341742	99342718	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_99341847_99342581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026730	chr9	+	315	3	ISM	ENSMUSG00000046242.9	ENST00000317876.8	716	6	839	2212	839	-2212	internal_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCATCTGCTTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	99342580	99350773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_99342719_99350228_99350312_99350679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026731	chr9	+	255	2	ISM	ENSMUSG00000046242.9	ENST00000317876.8	716	6	8931	1177	8931	-1177	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACATCAGCTGTAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	99350672	99351808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_99350773_99351653
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026732	chr9	+	297	2	ISM	ENSMUSG00000046242.9	ENST00000317876.8	716	6	9913	0	9913	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAATGGCTTTATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	99351654	99352985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_99351809_99352842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026733	chr9	+	147	1	NIC	ENSMUSG00000046242.9	novel	1196	12	NA	NA	11099	2	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGGCTTTATGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	99352840	99352987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_99352800_99353000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026734	chr9	-	1108	1	ISM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	89420	0	89170	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTCCAAGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	99361532	99360424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99360400_99361500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026735	chr9	-	1373	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	80710	-1040	80687	1040	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGCAGGTTGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	99370015	99361723	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026736	chr9	-	264	3	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	72429	3253	72406	-3253	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATTGGTGAGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	99378296	99366016	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99366092_99369916_99370013_99378203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026737	chr9	-	344	3	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	71279	7152	71256	-7152	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTCAGTCCCTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	99379446	99369915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99370013_99378203_99378300_99379295
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026738	chr9	-	341	3	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	69285	15440	69262	-15440	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTGTGGGGGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	99381440	99378203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99378300_99379295_99379446_99381345
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026739	chr9	-	339	3	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	66065	16532	66042	-16532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACATATGATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	99384660	99379295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99379446_99381345_99381439_99384564
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026740	chr9	-	347	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	62938	18582	62915	-18582	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTCACTGTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	99387787	99381345	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99381439_99384564_99384652_99387317_99387400_99387702
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026741	chr9	-	328	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	48089	21822	48066	16271	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTCTCCAAGTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	99402636	99384585	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99384652_99387317_99387400_99387702_99387786_99402539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026742	chr9	-	436	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	45333	24580	45310	13513	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGGTGTGGAAACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	99405392	99387343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99387400_99387702_99387786_99402539_99402636_99405191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026743	chr9	-	443	1	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	49403	0	49403	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTATGTGTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	99401299	99400856	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99400900_99401300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026744	chr9	-	349	3	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	43235	1693	43235	-1693	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAGAAGGTGAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	99407467	99402549	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99402636_99405191_99405393_99407405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026745	chr9	-	318	3	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	41667	4371	41667	-4371	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTCAGTGAGCGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	99409035	99405227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99405393_99407405_99407467_99408943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026746	chr9	-	266	4	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	39281	6549	39281	-6549	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCCAATTAATTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	99411421	99407405	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99407467_99408943_99409035_99409131_99409208_99411383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026747	chr9	-	399	4	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	32363	46371	32340	-8278	internal_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTAGGCTGGAACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	99418362	99409134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99409208_99411383_99411465_99417847_99417946_99418215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026748	chr9	-	280	3	ISM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	30888	17026	30888	-17026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCCTGTCACTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	99419814	99417882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_99417946_99418215_99418359_99419740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026749	chr9	-	673	1	Genic_Genomic	ENSMUSG00000032475.16	novel	NA	NA	NA	NA	13896	5	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGCCATATTGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100375013	100374340	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_100374300_100375000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026750	chr9	-	1092	2	ISM	ENSMUSG00000032475.16	ENSMUST00000112874.4	1513	3	9107	69	9107	-69	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATTCTTGTAAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	100379802	100377124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_100377725_100379310
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026751	chr9	-	750	2	ISM	ENSMUSG00000032475.16	ENSMUST00000112874.4	1513	3	5	2344	5	-2344	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCAAAGTCACCAGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	100388904	100379399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_100380024_100388778
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026752	chr9	-	530	5	ISM	ENSMUSG00000032527.14	ENST00000466072.5	1699	15	48973	0	48973	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGATGGAAGGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	100867941	100864739	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026753	chr9	+	1050	1	FSM	ENSMUSG00000104392.2	ENSMUST00000195535.2	2034	1	986	-2	986	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTTGGTTATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100991989	100993039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_100992000_100993000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026754	chr9	-	2430	1	Genic_Genomic	ENSMUSG00000032534.19	novel	NA	NA	NA	NA	32752	3	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTTGTCTAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	102464213	102461783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_102461800_102464200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026755	chr9	+	481	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	5	103	5	72	multi-exon	TRUE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTTCCCAGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	102503499	102511521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_102503546_102506961_102507088_102511212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026756	chr9	+	310	3	FSM	ENSMUSG00000035048.14	ENSMUST00000188398.7	727	3	281	136	-58	-128	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGTCCCACCCGCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	102503803	102511313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_102503887_102506961_102507088_102511212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026757	chr9	+	397	3	NNC	ENSMUSG00000035048.14	novel	595	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	102503864	102511441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_102503907_102506961_102507088_102511212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026758	chr9	+	535	3	FSM	ENSMUSG00000035048.14	ENSMUST00000186693.2	595	3	60	0	60	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	102503937	102511441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_102504118_102506961_102507088_102511212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026759	chr9	+	388	3	ISM	ENSMUSG00000035048.14	ENSMUST00000038673.14	411	4	2882	0	2866	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	102506743	102511441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_102506777_102506961_102507088_102511212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026760	chr9	+	419	1	Genic_Genomic	ENSMUSG00000035048.14	novel	NA	NA	NA	NA	7329	1	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCTTCTGTCAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	102511206	102511625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_102511200_102511600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026761	chr9	+	1081	1	ISM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	14670	0	14670	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	102609536	102610617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_102609500_102610600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026762	chr9	-	1041	1	ISM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	13065	0	13065	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTTTTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	103066271	103065230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103065200_103066300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026763	chr9	-	1191	3	ISM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	9786	1393	9786	-1393	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCACAAGGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	103069550	103066623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103067621_103068267_103068323_103069411
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026764	chr9	-	1121	1	ISM	ENSMUSG00000032803.16	ENSMUST00000035484.11	3387	5	11616	10	10673	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	103231423	103230302	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103230300_103231400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026765	chr9	-	950	2	ISM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	8524	2070	8524	776	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAGCTAAGGAATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	103233572	103232372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103233229_103233478
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026766	chr9	-	634	1	ISM	ENSMUSG00000042757.17	ENSMUST00000049452.15	3574	5	209220	7	126211	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAGGACCAAGTCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	103360786	103360152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103360200_103360800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026767	chr9	-	674	2	ISM	ENSMUSG00000042757.17	ENST00000508711.5	2073	3	120543	1223	120543	259	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGGTGCCAGCCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	103366454	103361375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103361983_103366387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026768	chr9	-	267	1	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	16269	0	16269	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTTTGAGATTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	103924064	103923797	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103923800_103924100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026769	chr9	-	434	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	13529	844	13529	-844	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAATCAGTACCACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	103926804	103924641	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103924886_103926432_103926540_103926721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026770	chr9	-	322	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	13164	2635	13164	-2635	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGTGAAATCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	103927169	103926432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103926540_103926721_103926801_103927033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026771	chr9	-	302	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	8943	2966	8943	-2966	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGAGGAGGCAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	103931390	103926763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103926801_103927033_103927170_103931261
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026772	chr9	-	342	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	8671	3268	8671	-3268	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGTAGAAAGCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	103931662	103927065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103927170_103931261_103931390_103931552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026773	chr9	-	267	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	7913	7462	7913	-7462	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGGGCTGGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103932420	103931259	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103931390_103931552_103931658_103932388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026774	chr9	-	258	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	7264	7755	7264	-7755	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGCATTGTCCTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	103933069	103931552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103931658_103932388_103932474_103933001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026775	chr9	-	251	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	6149	8624	6149	-8624	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACTTTGAAGCTCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	103934184	103932421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103932474_103933001_103933089_103934072
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026776	chr9	-	287	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	2825	9206	2825	-9206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAAAACGTATGAATATT	NA	NA	NA	NA	NA	NA	NA	NA	103937508	103933003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103933089_103934072_103934183_103937416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026777	chr9	-	230	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	2693	10293	2693	-10293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAACACACCCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	103937640	103934090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103934183_103937416_103937507_103937592
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026778	chr9	-	378	3	ISM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	92	13628	92	-13628	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGTAAGGTAAAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	103940241	103937425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_103937507_103937592_103937639_103939990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026779	chr9	+	1018	2	ISM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	60374	194	60327	68	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGAAAACTTAACTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104001258	104004730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_104001327_104003780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026780	chr9	+	813	2	ISM	ENSMUSG00000032564.17	ENST00000512055.5	4303	17	67	464526	67	-303051	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGATTTTGCATCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	104444040	104447218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_104444100_104446464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026781	chr9	+	1091	3	ISM	ENSMUSG00000032564.17	ENSMUST00000057742.15	3959	16	-111	161686	-111	-212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGACAGAAGATGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104446570	104750057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_104447301_104563623_104563805_104749877
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026782	chr9	+	968	3	ISM	ENSMUSG00000032564.17	ENSMUST00000077190.7	3409	13	452605	1099	452605	-1099	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGAAGCGGGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	104899590	104910644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_104899621_104903901_104904139_104909943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026783	chr9	+	739	1	ISM	ENSMUSG00000032564.17	ENST00000617767.4	3584	16	467149	0	464020	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTAGGAGTTGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	104911005	104911744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_104911000_104911700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026784	chr9	+	1898	4	ISM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	18137	1263	18137	-1263	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATTGCAATGGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	104948574	104955824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_104948684_104950973_104951052_104952360_104952439_104954191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026785	chr9	+	1773	1	Genic_Genomic	ENSMUSG00000032563.17	novel	NA	NA	NA	NA	24878	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCATCAAAGATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	104955315	104957088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_104955300_104957100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026786	chr9	-	355	2	ISM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	365	991	365	-991	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGGACCCCTGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	105008658	105007521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_105007710_105008491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026787	chr9	-	712	3	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	52004	892	52004	-892	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTTTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	105295343	105289913	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_105290389_105291832_105291975_105295248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026788	chr9	-	502	4	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	49851	2811	49851	-2811	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGAAAATGCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	105297496	105291832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_105291975_105295248_105295345_105295742_105295891_105297380
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026789	chr9	-	516	4	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	30701	19689	30701	-8744	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGATAGTGCCAAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	105316646	105308710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_105308792_105309852_105310024_105312250_105312408_105316539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026790	chr9	-	118	2	ISM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	10408	41827	10408	-30882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGACAGCTCCGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105336939	105330848	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_105330886_105336858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026791	chr9	+	4305	2	FSM	ENSMUSG00000086296.3	ENSMUST00000150953.2	4325	2	23	-3	23	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTGGACGACTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	106032173	106036953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_106033717_106034191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026792	chr9	-	525	1	ISM	ENSMUSG00000020258.17	ENSMUST00000036382.13	4209	4	2233	2504	2020	1	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATAACGACTCATACAC	NA	NA	NA	NA	NA	NA	NA	NA	106033084	106032559	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106032600_106033100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026793	chr9	-	832	3	FSM	ENSMUSG00000020258.17	ENST00000305690.12	1315	3	201	282	201	-282	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGAAGCGGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	106034903	106032842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_106033307_106034343_106034496_106034687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026794	chr9	+	900	4	ISM	ENSMUSG00000023277.14	ENSMUST00000188650.2	1508	8	6201	-2	6201	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	106090197	106092588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106090263_106091299_106091451_106091554_106091677_106092026
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026795	chr9	-	280	1	ISM	ENSMUSG00000032786.17	ENSMUST00000112524.9	3089	11	13993	3	13993	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCTTGTCTTGTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	106110936	106110656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106110700_106110900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026796	chr9	-	559	3	ISM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	11239	53	11113	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCTTTATATGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	106113816	106111178	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106111397_106112586_106112750_106113638
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026797	chr9	-	353	2	ISM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	9633	2578	9507	-2578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATGCTAATGGACGCT	NA	NA	NA	NA	NA	NA	NA	NA	106115422	106113703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106113908_106115273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026798	chr9	-	278	2	ISM	ENSMUSG00000032786.17	ENSMUST00000112524.9	3089	11	8905	4690	8905	-4218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGAGGTGGAGGGATCGG	NA	NA	NA	NA	NA	NA	NA	NA	106116024	106115343	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106115439_106115841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026799	chr9	-	328	2	ISM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	8140	4753	8014	-4753	internal_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAGTAGCATTTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	106116915	106115878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106116022_106116730
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026800	chr9	-	390	2	ISM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	6518	5623	6392	-5623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTAAGATGATGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	106118537	106116748	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106116916_106118314
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026801	chr9	-	376	2	ISM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	6069	7188	5943	-7188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGCTCTCAGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	106118986	106118313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106118538_106118834
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026802	chr9	-	363	2	ISM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	928	9276	802	-9276	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGGAGGACGTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	106124127	106120401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106120595_106123957
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026803	chr9	-	297	2	ISM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	-155	12982	-155	-12982	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCTGCAGAAGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	106125210	106124107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106124178_106124983
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026804	chr9	+	668	5	ISM	ENSMUSG00000023345.18	ENSMUST00000217213.2	1398	11	3270	54645	3270	-54628	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGGAGGGCCGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	106162078	106172430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026805	chr9	+	595	5	ISM	ENSMUSG00000023345.18	ENSMUST00000191434.2	1242	10	6610	29	6380	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCCCACCTGAGAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	106165188	106227062	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106226880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026806	chr9	+	1662	1	ISM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	5431	0	5431	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCCTGGTGTTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	106251261	106252923	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106251300_106252900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026807	chr9	+	729	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	106306656	106308767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026808	chr9	+	296	4	NNC	ENSMUSG00000048758.15	novel	733	4	NA	NA	27	-348	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCGCGCGCAGAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	106306679	106308359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_106306776_106307168_106307212_106307506_106307572_106308267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026809	chr9	+	658	4	FSM	ENSMUSG00000048758.15	ENSMUST00000059802.7	710	4	14	38	14	21	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTGTTCTTACAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	106306751	106308728	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_106306839_106307168_106307214_106307506_106307572_106308267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026810	chr9	+	501	1	NIC	ENSMUSG00000048758.15	novel	733	4	NA	NA	1529	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	106308266	106308767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_106308300_106308800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026811	chr9	-	173	1	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	4490	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCAACTCTTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	106310446	106310273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_106310300_106310400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026812	chr9	-	309	3	ISM	ENSMUSG00000023262.14	ENSMUST00000215395.2	1051	12	4093	-1	4093	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTTCCAACTCTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	106310843	106310274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106310445_106310560_106310622_106310765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026813	chr9	-	360	4	ISM	ENSMUSG00000023262.14	ENSMUST00000216400.2	1030	12	2906	282	2906	-282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACTCACTTGCAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	106312030	106310557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106310622_106310765_106310846_106311728_106311798_106311883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026814	chr9	-	269	3	ISM	ENSMUSG00000023262.14	ENSMUST00000216400.2	1030	12	2569	1607	2569	-1607	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCCACTCAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106312367	106311882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106312029_106312163_106312214_106312294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026815	chr9	-	273	4	ISM	ENSMUSG00000023262.14	ENST00000476351.5	1238	14	2542	1887	2032	-1887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCAGCGGAGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	106312904	106312162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106312214_106312294_106312369_106312666_106312724_106312813
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026816	chr9	-	322	4	ISM	ENSMUSG00000023262.14	ENSMUST00000215395.2	1051	12	1515	2390	1515	-2390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATGGGTTTGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	106313421	106312665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106312724_106312813_106312904_106312982_106313060_106313324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026817	chr9	-	238	3	ISM	ENSMUSG00000023262.14	ENSMUST00000215395.2	1051	12	976	2707	976	-2707	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAGTGGCATCTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	106313960	106312982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106313060_106313324_106313420_106313894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026818	chr9	-	267	3	ISM	ENSMUSG00000023262.14	ENST00000476351.5	1238	14	514	3047	4	-3047	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATCCCCCATTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	106314932	106313322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106313420_106313894_106313960_106314827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026819	chr9	-	552	2	FSM	ENSMUSG00000042210.18	ENST00000491470.1	546	2	-1	-5	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTTGTGTTTCCTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	106321484	106317247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_106317604_106321288
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026820	chr9	-	361	1	NIC	ENSMUSG00000042210.18	novel	1256	7	NA	NA	3871	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGACGTTGTGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	106317612	106317251	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_106317300_106317600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026821	chr9	+	678	3	ISM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	127	1289	127	-635	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106325700	106328833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106325909_106327202_106327431_106328591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026822	chr9	+	1628	3	FSM	ENSMUSG00000042073.16	ENSMUST00000213179.2	1627	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGCTTTTGCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	106326981	106330119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_106327431_106328591_106328834_106329182
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026823	chr9	+	417	1	ISM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	4132	0	2723	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTTTTGCTGTCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	106329705	106330122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106329700_106330100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026824	chr9	+	385	5	ISM	ENSMUSG00000023495.14	ENST00000428823.6	1717	11	250	2083	250	-2045	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAGCATCCAGGGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	106337473	106339125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106339047
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026825	chr9	+	370	4	ISM	ENSMUSG00000023495.14	ENST00000428823.6	1717	11	626	1895	626	-1857	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGCCCATAGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	106337849	106339313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106337967_106338191_106338324_106339047_106339123_106339267
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026826	chr9	+	419	6	ISM	ENSMUSG00000023495.14	ENST00000428823.6	1717	11	994	1426	994	-1388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGGAACCAAGCGGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	106338217	106339782	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106338324_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026827	chr9	+	1035	4	ISM	ENSMUSG00000023495.14	ENST00000428823.6	1717	11	2159	136	2159	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGGGAGGGCAACCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	106339382	106341072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106339452_106339560_106339614_106339706_106339877_106340329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026828	chr9	+	409	2	NNC	ENSMUSG00000023495.14	novel	1717	11	NA	NA	2483	-597	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGAGCAAGAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	106339706	106340573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_106339877_106340334
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026829	chr9	+	779	1	Genic_Genomic	ENSMUSG00000023495.14	novel	NA	NA	NA	NA	3210	1	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCAGTAATACTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106340433	106341212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_106340400_106341200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026830	chr9	-	664	1	Genic_Genomic	ENSMUSG00000023249.16	novel	NA	NA	NA	NA	5393	2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTGGTTTCATTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	106348182	106347518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_106347500_106348200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026831	chr9	-	675	2	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	4489	229	4489	133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGCCTTAAAAATATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	106349086	106348054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106348602_106348958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026832	chr9	-	669	4	ISM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	1224	3432	1224	-3070	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGGGCTGGCCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	106352351	106351257	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_106351484_106351595_106351720_106351878_106352068_106352221
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026833	chr9	+	671	6	ISM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	6478	0	6478	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106360945	106362623	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026834	chr9	-	1777	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	119	0	-22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106562903	106535944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026835	chr9	-	1030	3	FSM	ENSMUSG00000040813.17	ENST00000614067.4	1028	3	-1	-1	-1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106559365	106535944	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_106536507_106539558_106539728_106559066
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026836	chr9	-	561	1	NIC	ENSMUSG00000040813.17	novel	1364	6	NA	NA	22853	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106536511	106535950	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_106536000_106536500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026837	chr9	+	835	3	ISM	ENSMUSG00000040325.17	ENSMUST00000055009.15	4967	23	22963	21981	22963	-21578	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGACGAGAGAGGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	106729230	106735656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106729307_106731368_106731494_106735022
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026838	chr9	+	831	2	ISM	ENSMUSG00000040325.17	ENSMUST00000055009.15	4967	23	29334	20712	29334	-20309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGCTATAACTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	106735601	106736925	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_106736287_106736779
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026839	chr9	-	1243	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	-1221	6489	-1221	-6489	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCGGACCCGGAGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	106765848	106764605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_106764600_106765800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026840	chr9	-	1639	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	5	603	5	-603	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTGCTTATGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	106769173	106765216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026841	chr9	-	799	1	Genic_Genomic	ENSMUSG00000032579.15	novel	NA	NA	NA	NA	10451	1	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTGCCTCTTTTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	107205080	107204281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_107204300_107205100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026842	chr9	-	989	3	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	9817	213	9799	-213	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTAAGGGCAACGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	107205732	107204495	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107205272_107205374_107205489_107205633
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026843	chr9	+	462	4	FSM	ENSMUSG00000037977.7	ENST00000441239.5	526	4	64	0	64	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACCAGAGCCACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	107219611	107225314	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107219729_107223344_107223371_107224016_107224165_107225143
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026844	chr9	+	2195	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTGCAGCCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	107411143	107415873	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107412529_107415063
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026845	chr9	-	1782	3	FSM	ENSMUSG00000037190.13	ENSMUST00000041459.9	1786	3	6	-2	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGCCTTCAGCGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	107419058	107416203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_107417585_107418201_107418240_107418695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026846	chr9	-	551	1	ISM	ENSMUSG00000037190.13	ENSMUST00000041459.9	1786	3	1740	568	1740	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGGAGGAGCAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	107417324	107416773	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107416800_107417300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026847	chr9	-	568	2	NNC	ENSMUSG00000037190.13	novel	1786	3	NA	NA	212	-427	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCACTGTCACTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	107418852	107417200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_107417612_107418695
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026848	chr9	+	867	5	ISM	ENSMUSG00000010044.13	ENST00000360165.7	1470	11	2329	6	2329	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGCGAATACGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	107426984	107428390	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026849	chr9	+	1712	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	107431796	107439462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026850	chr9	+	274	1	ISM	ENSMUSG00000010067.14	ENSMUST00000093786.9	1787	6	10439	0	7411	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGACTCTATAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	107439192	107439466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107439200_107439500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026851	chr9	+	1633	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGTGGCGTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	107440485	107443311	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107440732_107441774_107441896_107442045
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026852	chr9	+	1271	1	Genic_Genomic	ENSMUSG00000010054.5	novel	NA	NA	NA	NA	1474	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGTGGCGTCCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	107442042	107443313	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_107442000_107443300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026853	chr9	+	1895	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	1	-3	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTCTTTTTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	107446316	107449978	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026854	chr9	+	830	2	FSM	ENSMUSG00000079334.9	ENSMUST00000093785.6	2053	2	524	699	524	-638	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCCATGCCCGCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	107457839	107460550	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107458135_107460015
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026855	chr9	+	1384	2	FSM	ENSMUSG00000079334.9	ENST00000443842.1	1378	2	-4	-2	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAGCTCTGGCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	107459726	107461190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107460169_107460248
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026856	chr9	+	1371	2	NNC	ENSMUSG00000079334.9	novel	1378	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGAGCTCTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	107459732	107461188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_107460169_107460253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026857	chr9	-	1368	2	Antisense	novelGene_ENSMUSG00000036091.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCAACCCCTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	107461188	107459737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_107460188_107460270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026858	chr9	-	1365	2	Antisense	novelGene_ENSMUSG00000036091.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCATCCCAACCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	107461188	107459740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_107460176_107460258
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026859	chr9	-	1330	2	Antisense	novelGene_ENSMUSG00000036091.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCACCTGCAGTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107461188	107459763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_107460176_107460270
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026860	chr9	+	535	1	ISM	ENSMUSG00000079334.9	ENSMUST00000093785.6	2053	2	3399	0	984	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACAGTTTATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	107460714	107461249	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107460700_107461200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026861	chr9	+	1243	2	FSM	ENSMUSG00000036091.9	ENST00000359051.7	1235	2	0	-8	0	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTTATGCTTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	107461945	107464097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_107462865_107463773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026862	chr9	+	318	1	NIC	ENSMUSG00000036091.9	novel	1830	4	NA	NA	1052	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAATTCCCCTTTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	107463772	107464090	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_107463800_107464100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026863	chr9	-	863	1	NIC	ENSMUSG00000032562.14	novel	1777	9	NA	NA	20325	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	107492186	107491323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_107491300_107492200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026864	chr9	-	1193	3	ISM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	19057	151	19002	-151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCCGCTGCCTGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	107493509	107491474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107492298_107492810_107493025_107493353
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026865	chr9	-	468	2	ISM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	19488	336	19488	-336	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTTGAGTGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	107493023	107491659	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107491915_107492810
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026866	chr9	-	309	3	ISM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	18354	2029	18354	-2029	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTTGAAGACTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	107494157	107493352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107493508_107493612_107493743_107494133
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026867	chr9	-	319	1	Genic_Genomic	ENSMUSG00000032580.13	novel	NA	NA	NA	NA	30300	2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTTATGTAGCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	107617886	107617567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_107617600_107617900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026868	chr9	-	315	3	ISM	ENSMUSG00000032580.13	ENST00000347869.8	3095	25	20906	5566	20894	-5544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAAGAGCAAAACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	107627292	107623242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107623380_107626906_107626999_107627206
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026869	chr9	-	321	2	ISM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	3277	24998	3277	-24998	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGTAAGAGAAGCAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	107644909	107642696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107642850_107644741
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026870	chr9	-	469	3	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	94802	-4	94802	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107655218	107650757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107651007_107651790_107651921_107655128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026871	chr9	-	459	3	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	80807	16108	80807	-16108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCACCATTTAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	107669213	107666869	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107666905_107668203_107668365_107668950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026872	chr9	-	422	2	ISM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	20301	77416	20301	-77416	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAGGAGAAACCTAACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107729719	107728177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_107728204_107729323
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026873	chr9	+	1333	4	ISM	ENSMUSG00000032583.8	ENST00000455683.6	1595	5	10549	-18	10489	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGTCATTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	107775869	107780338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107776011_107778393_107779160_107779814_107779963_107780060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026874	chr9	+	924	2	ISM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	11904	1451	11904	-1433	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTCAGTGCGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	107777284	107778887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107777715_107778393
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026875	chr9	+	962	1	ISM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	20353	0	20347	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTGGCAGAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	107848507	107849469	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107848500_107849500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026876	chr9	-	990	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	35	0	35	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTCCCATACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	107863043	107861421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_107862264_107862895
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026877	chr9	-	844	1	NIC	ENSMUSG00000042106.6	novel	1025	2	NA	NA	813	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTCCCATACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	107862265	107861421	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_107861400_107862300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026878	chr9	+	335	2	ISM	ENSMUSG00000032594.12	ENST00000468463.5	1787	6	29362	5153	29351	-5153	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCCACAAGCAGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	107909195	107918225	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107909409_107918103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026879	chr9	+	533	2	ISM	ENSMUSG00000032594.12	ENST00000395238.5	4073	5	42092	2957	42081	-358	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGATGTTCGCATGATTG	NA	NA	NA	NA	NA	NA	NA	NA	107921925	107923020	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107922100_107922661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026880	chr9	+	280	1	ISM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	43399	2603	43254	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCTGTGGCTGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	107923098	107923378	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107923100_107923400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026881	chr9	+	416	1	ISM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	45862	4	45717	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTGTCCAAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	107925561	107925977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_107925600_107926000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026882	chr9	+	1419	2	NNC	ENSMUSG00000092218.2	novel	203	2	NA	NA	-556	-5960	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAACATTTTCTCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	107928317	107929831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_107928430_107928524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026883	chr9	+	1311	1	NIC	ENSMUSG00000070284.11	novel	2702	9	NA	NA	1978	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAACATTTTCTCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	107928520	107929831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_107928500_107929800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026884	chr9	-	4639	1	ISM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	54686	0	54464	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAGTCTAGTGGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	108086471	108081832	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108081800_108086500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026885	chr9	-	3927	3	FSM	ENSMUSG00000039952.16	ENST00000539901.5	5636	3	193	1516	7	-424	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCTCCAACCTAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	108140928	108083580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_108086861_108095211_108095610_108140679
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026886	chr9	+	2138	6	NNC	ENSMUSG00000032606.8	novel	2133	6	NA	NA	-1	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	108167626	108173697	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_108167862_108170534_108170712_108171129_108171248_108171644_108171717_108172087_108172193_108172266
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026887	chr9	+	638	6	NNC	ENSMUSG00000032606.8	novel	640	7	NA	NA	5	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGTGTCAGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108167733	108173696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_108167862_108170534_108170712_108171129_108171248_108171644_108171717_108172087_108172197_108173662
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026888	chr9	+	1029	7	FSM	ENSMUSG00000032607.13	ENST00000458307.6	1029	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCTAGAGGGCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	108174322	108178732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108174495_108174910_108174992_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026889	chr9	+	464	3	ISM	ENSMUSG00000032607.13	ENST00000636199.1	723	4	5	345	5	-345	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACACAGTCCTATTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	108174327	108178387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108174495_108177732_108177914_108178271
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026890	chr9	+	224	1	NIC	ENSMUSG00000032607.13	novel	2082	9	NA	NA	4187	1	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGAGGGCATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	108178509	108178733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_108178500_108178700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026891	chr9	-	443	1	ISM	ENSMUSG00000039461.13	ENSMUST00000044725.9	1668	3	2590	0	2548	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTGTGGTTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	108180599	108180156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108180200_108180600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026892	chr9	-	518	2	ISM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	729	188	517	48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGTTCTGAGATTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108182630	108181040	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108181453_108182524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026893	chr9	+	707	4	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	72	6943	72	-6943	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCCCTACAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	108183399	108208190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026894	chr9	+	465	4	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	9200	2752	9200	-2752	internal_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGGGGCAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108192527	108212381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108192582_108204782_108204941_108208069_108208191_108212249
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026895	chr9	+	700	4	ISM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	21530	922	21530	-922	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTGCTCTAACAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	108204857	108214211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108204941_108208069_108208191_108212249_108212381_108213846
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026896	chr9	+	419	1	Genic_Genomic	ENSMUSG00000007815.14	novel	NA	NA	NA	NA	31388	1	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTATTCTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	108214715	108215134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_108214700_108215100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026897	chr9	+	1078	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	-4	-2	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCCTGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	108216248	108217544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108216758_108216975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026898	chr9	+	1064	2	FSM	ENSMUSG00000063856.9	ENSMUST00000191997.2	787	2	-184	-93	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTCCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108216257	108217542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108216758_108216978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026899	chr9	+	604	2	FSM	ENSMUSG00000063856.9	ENST00000643797.1	601	2	-1	-2	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCCCGATGCCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	108216510	108217470	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108216620_108216975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026900	chr9	+	495	1	NIC	ENSMUSG00000063856.9	novel	1072	2	NA	NA	462	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCATTCCCGATGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108216973	108217468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_108217000_108217500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026901	chr9	-	2348	2	ISM	ENSMUSG00000047220.6	ENSMUST00000076592.4	2890	7	21770	0	21770	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTATTTGTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	108283913	108280809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108283054_108283809
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026902	chr9	+	595	4	FSM	ENSMUSG00000050641.8	ENST00000432035.2	666	4	27	44	27	-44	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTTTAAACTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	108313730	108323237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108313779_108315622_108315737_108322398_108322456_108322861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026903	chr9	+	422	1	NIC	ENSMUSG00000050641.8	novel	690	4	NA	NA	9160	0	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCTGTTTGTACTCACA	NA	NA	NA	NA	NA	NA	NA	NA	108322863	108323285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_108322900_108323300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026904	chr9	-	489	1	ISM	ENSMUSG00000032609.13	ENSMUST00000193286.6	2956	11	13457	0	4253	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGGGGTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108325323	108324834	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108324800_108325300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026905	chr9	+	557	1	Genic_Genomic	ENSMUSG00000049305.7	novel	NA	NA	NA	NA	3963	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAGAGATGGCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	108342581	108343138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_108342600_108343100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026906	chr9	+	892	5	ISM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	2144	8073	1985	-7531	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGCCTGAGCAAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	108370039	108371365	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108370200_108370289_108370464_108370548_108370653_108370759_108371063_108371214
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026907	chr9	+	885	5	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	7424	2203	7265	-2203	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAGGAGGCCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	108375319	108376693	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026908	chr9	+	887	5	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	7775	1969	7616	-1969	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTTCCTGTTCGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	108375670	108376927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026909	chr9	+	879	5	ISM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	8061	1686	7902	-1686	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCACACACAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	108375956	108377210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026910	chr9	+	924	5	ISM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	8457	245	8457	-167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGATTTGAGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	108376511	108379271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026911	chr9	+	656	3	ISM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	98	6953	98	-6953	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTCTCCTCCAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	108385002	108386187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108385399_108385581_108385730_108386075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026912	chr9	+	439	4	ISM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	5612	1580	5612	-1580	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTCTTCATTGAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108390870	108391560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108391006_108391091_108391180_108391263_108391408_108391488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026913	chr9	+	460	4	NNC	ENSMUSG00000032604.17	novel	2374	23	NA	NA	6004	-1076	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCTGTGAGTGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	108391262	108392064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_108391408_108391488_108391594_108391744_108391835_108391944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026914	chr9	+	1488	3	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	1606	25326	1546	-10470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAAGACTTAATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	108395900	108411818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108396026_108405787_108406118_108410785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026915	chr9	+	1395	3	ISM	ENSMUSG00000006673.15	ENSMUST00000193258.6	2291	6	11589	3497	11536	-3266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAGAAAAGGATGCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	108405890	108419022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108406118_108410785_108411818_108418886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026916	chr9	+	1343	3	ISM	ENSMUSG00000006673.15	ENSMUST00000193258.6	2291	6	16486	2754	16433	-2523	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTGTGTATACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	108410787	108419765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108411818_108418886_108419065_108419630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026917	chr9	+	1019	4	ISM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	38899	0	38839	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTTCTTTATGACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	108433193	108437144	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108433270_108433606_108433759_108434156_108434248_108436444
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026918	chr9	-	898	4	ISM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	689	-1	689	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGGATCTGTTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	108443944	108442734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026919	chr9	-	763	2	ISM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	20	1016	20	-1016	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCTCCCCTACATTGA	NA	NA	NA	NA	NA	NA	NA	NA	108444613	108443751	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108443951_108444049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026920	chr9	-	741	2	NNC	ENSMUSG00000070283.5	novel	1487	5	NA	NA	-2	-1057	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGTGCTGCTCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	108444635	108443792	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_108443951_108444052
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026921	chr9	-	1103	1	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	5326	0	5326	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	108450612	108449509	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108449500_108450600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026922	chr9	-	1165	2	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	5174	15	5174	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTGAAATGTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	108450764	108449524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108450613_108450687
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026923	chr9	-	1151	2	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	3521	1657	3521	-1657	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATAGGCCTGGCCTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	108452417	108451166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108451200_108451299
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026924	chr9	-	1318	2	ISM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	4	3196	4	-3196	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCTGCTAGAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	108455934	108452705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108453782_108455692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026925	chr9	-	589	1	ISM	ENSMUSG00000006675.11	ENSMUST00000193621.2	1297	3	14001	0	14001	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGTGTCCTGTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	108460778	108460189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108460200_108460800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026926	chr9	-	503	1	ISM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	45936	0	45936	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	108480643	108480140	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108480100_108480600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026927	chr9	+	990	3	ISM	ENSMUSG00000032602.7	ENST00000430379.5	1534	7	20221	53	20221	-53	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCCATGAGAGCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	108559543	108561783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108559656_108560247_108560373_108561030
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026928	chr9	+	770	1	Genic_Genomic	ENSMUSG00000032602.7	novel	NA	NA	NA	NA	21749	1	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGTGTGATATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	108561071	108561841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_108561100_108561800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026929	chr9	+	1971	1	Genic_Genomic	ENSMUSG00000032601.14	novel	NA	NA	NA	NA	56010	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGGTGTGTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	108625665	108627636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_108625700_108627600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026930	chr9	+	922	3	FSM	ENSMUSG00000032599.13	ENST00000450045.5	710	3	-1	-211	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTGGCTCACCCACCAT	NA	NA	NA	NA	NA	NA	NA	NA	108662706	108674891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108662810_108673262_108673596_108674405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026931	chr9	+	752	2	ISM	ENSMUSG00000032599.13	ENSMUST00000194875.6	748	3	12191	-2	62	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCTCACCCACCATGC	NA	NA	NA	NA	NA	NA	NA	NA	108673254	108674893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108673596_108674482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026932	chr9	+	586	2	NNC	ENSMUSG00000032599.13	novel	1191	3	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTCGTCGGCACCGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	108673274	108674678	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_108673588_108674405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026933	chr9	+	479	2	ISM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	7055	921	7050	-921	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGGGAACTGTATTGGG	NA	NA	NA	NA	NA	NA	NA	NA	108692621	108695122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108692719_108694740
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026934	chr9	+	415	3	ISM	ENSMUSG00000023473.14	ENSMUST00000024238.11	11547	35	8250	17603	8250	-17603	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACACAGCGTGCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	108711768	108712565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108711912_108712199_108712326_108712419
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026935	chr9	+	628	2	ISM	ENSMUSG00000023473.14	ENSMUST00000024238.11	11547	35	22809	1388	22809	-1388	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCAGGGGTCTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	108726327	108728780	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108726675_108728499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026936	chr9	+	452	4	ISM	ENSMUSG00000025648.19	ENST00000383734.6	1409	13	15380	19734	15380	-19734	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108836361	108839724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108836427_108836759_108836817_108837416_108837539_108839516
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026937	chr9	+	451	3	ISM	ENSMUSG00000025648.19	ENST00000383734.6	1409	13	16461	19086	16461	-19086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTACGGTCCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	108837442	108840372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108837539_108839516_108839725_108840225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026938	chr9	+	487	3	ISM	ENSMUSG00000025648.19	ENST00000383734.6	1409	13	18533	2741	18533	-2741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGGCCTTGTCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	108839514	108856717	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108839725_108840225_108840373_108856587
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026939	chr9	+	1388	2	ISM	ENSMUSG00000025648.19	ENSMUST00000051873.15	3316	14	36992	577	36980	-577	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTGTCTGTGCGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	108857961	108860719	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108858027_108859396
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026940	chr9	+	1385	1	Genic_Genomic	ENSMUSG00000025648.19	novel	NA	NA	NA	NA	38932	2	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATATGAGGTGGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	108859913	108861298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_108859900_108861300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026941	chr9	+	1605	5	ISM	ENSMUSG00000025647.17	ENSMUST00000197099.5	742	6	504	-982	504	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTTCTTCAGCGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	108869987	108886793	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026942	chr9	+	788	1	ISM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	18425	0	2127	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTACTTCTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	108886057	108886845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_108886100_108886800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026943	chr9	-	994	1	NIC	ENSMUSG00000049734.10	novel	1084	2	NA	NA	322	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTTGCCGCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108887997	108887003	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_108887000_108888000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026944	chr9	-	391	2	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	13561	-38	13561	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGAGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	108889559	108888814	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108888977_108889330
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026945	chr9	-	457	2	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	8602	1750	8602	-1750	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTAAAGCAGGGCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	108894518	108890602	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108890737_108894195
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026946	chr9	-	437	2	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	8013	5652	8013	-5652	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCATCACTCAGCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	108895107	108894504	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108894868_108895033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026947	chr9	-	646	3	ISM	ENSMUSG00000025646.10	ENSMUST00000161521.8	2381	12	-46	11933	26	-11933	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCAGAGCATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108903166	108900785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_108900957_108901674_108901806_108902822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026948	chr9	-	944	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	1	-1	1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGGGTTGCCATGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	108911654	108906953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026949	chr9	+	1174	3	FSM	ENSMUSG00000025645.9	ENST00000442740.1	1173	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACCTTCTTCAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	108918574	108921339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_108918716_108919797_108920074_108920582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026950	chr9	-	1030	2	Antisense	novelGene_ENSMUSG00000025645.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAGAGGCAGAAACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	108921338	108919795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_108920068_108920580
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026951	chr9	+	755	5	NNC	ENSMUSG00000032478.15	novel	766	6	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCTAACAAAACCTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	109662276	109671677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_109662494_109664390_109664483_109668675_109668803_109670994_109671156_109671519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026952	chr9	+	158	2	ISM	ENSMUSG00000032478.15	ENSMUST00000200468.2	865	6	177	7263	10	-7202	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGATCCTGGAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	109662286	109664466	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_109662364_109664385
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026953	chr9	+	506	4	FSM	ENSMUSG00000032478.15	ENST00000435684.5	506	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCACAAACAACCTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	109664389	109671668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_109664483_109668675_109668779_109670994_109671156_109671519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026954	chr9	+	554	5	ISM	ENSMUSG00000032478.15	ENST00000452211.5	766	6	2114	-5	1	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCTAACAAAACCTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	109664390	109671677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026955	chr9	+	356	3	FSM	ENSMUSG00000032478.15	ENST00000415644.5	349	3	2	-9	2	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAAAACCTAGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	109664391	109671681	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_109664483_109668675_109668779_109671519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026956	chr9	+	176	1	NIC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	7125	18	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGGAGACCCAGCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	109671514	109671690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_109671500_109671700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026957	chr9	+	112	1	ISM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	10105	0	7541	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	109671930	109672042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_109671900_109672000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026958	chr9	+	452	1	ISM	ENSMUSG00000032477.15	ENST00000302506.8	3510	15	17761	0	17154	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATACTCAACTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	109722527	109722979	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_109722500_109723000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026959	chr9	+	2221	1	ISM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	150275	0	19144	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTCTGTCCTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	109910802	109913023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_109910800_109913000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026960	chr9	-	895	2	ISM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	12839	2800	12839	-2797	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGCTTCCTCCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	109917316	109916187	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_109916264_109916497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026961	chr9	-	895	4	ISM	ENSMUSG00000032480.18	ENSMUST00000200066.5	4623	23	1750	14408	-508	-14408	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGTATTGATGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	109944653	109927798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_109927928_109938093_109938190_109942038_109942159_109944103
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026962	chr9	+	2663	3	ISM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	90021	30	89964	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAATGAAATACCATTT	NA	NA	NA	NA	NA	NA	NA	NA	110051068	110069216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_110051225_110063944_110064122_110066886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026963	chr9	+	823	2	ISM	ENSMUSG00000032482.10	ENST00000610462.1	2053	4	6	15704	6	-15704	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGGTGCAGACATGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	110074504	110075927	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_110074763_110075362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026964	chr9	+	1330	3	ISM	ENSMUSG00000032482.10	ENST00000610462.1	2053	4	1329	-6	695	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCACTTCCTTAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	110075827	110091637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_110076459_110080026_110080216_110091127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026965	chr9	+	514	1	NIC	ENSMUSG00000032482.10	novel	3870	5	NA	NA	15991	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCACTTCCTTAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	110091123	110091637	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_110091100_110091600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026966	chr9	+	867	3	ISM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	10570	-1	10539	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGAGGTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	110144810	110150392	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_110145021_110148637_110148785_110149882
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026967	chr9	-	1218	2	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	20430	1233	20430	-1233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTTTACTGTTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	110216831	110215521	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_110215707_110215798
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026968	chr9	-	1116	3	ISM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	19542	2153	19542	-2153	internal_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGGTGCCTTCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	110217719	110216441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_110216825_110216920_110217047_110217112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026969	chr9	-	1217	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	110453514	110450202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026970	chr9	-	945	3	ISM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	2182	0	2182	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	110451338	110450202	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_110450806_110450907_110451051_110451139
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026971	chr9	+	470	3	ISM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	53623	-1	53623	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGTTGCTCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	110539193	110540675	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_110539230_110540153_110540231_110540318
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026972	chr9	+	359	1	Genic_Genomic	ENSMUSG00000019659.9	novel	NA	NA	NA	NA	54747	2	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTTGCTCTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	110540317	110540676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_110540300_110540700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026973	chr9	-	532	3	FSM	ENSMUSG00000049555.11	ENST00000644830.1	528	3	-1	-3	-1	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGGGACAAGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	110699819	110695772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_110696026_110696507_110696666_110699698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026974	chr9	-	527	3	NNC	ENSMUSG00000049555.11	novel	528	3	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGGGACAAGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	110699818	110695772	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_110696026_110696511_110696666_110699698
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026975	chr9	+	1778	2	ISM	ENSMUSG00000032497.20	ENSMUST00000217117.2	1363	12	40945	-1406	40945	-40	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTTCATTAAGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	111052339	111054696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_111052439_111053017
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026976	chr9	+	1721	1	NIC	ENSMUSG00000032497.20	novel	3260	15	NA	NA	41621	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCATCCTGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	111053015	111054736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_111053000_111054700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026977	chr9	-	521	4	NNC	ENSMUSG00000032498.10	novel	2165	18	NA	NA	37269	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCATAGCCACCGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	111060107	111057523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026978	chr9	-	535	5	NNC	ENSMUSG00000032498.10	novel	2165	18	NA	NA	28488	659	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGCAGCAGATGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	111068888	111059308	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_111059404_111059964_111060134_111062390_111062455_111064974_111065084_111068790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026979	chr9	-	395	3	ISM	ENSMUSG00000032498.10	ENST00000441265.6	1730	14	28467	0	28466	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGTGTAGCCATCTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	111068910	111059967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_111060134_111064974_111065084_111068790
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026980	chr9	-	575	3	ISM	ENSMUSG00000032498.10	ENST00000441265.6	1730	14	26699	5076	26698	-5076	internal_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATCCTCAGTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	111070678	111065043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_111065084_111068790_111068940_111070292
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026981	chr9	-	644	3	ISM	ENSMUSG00000032498.10	ENST00000441265.6	1730	14	20902	8869	20901	-8869	internal_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTCTTGAGTCTCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	111076475	111068836	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_111068940_111070292_111070676_111076317
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026982	chr9	-	593	4	ISM	ENSMUSG00000032498.10	ENST00000441265.6	1730	14	15360	10449	15359	-10449	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTCCCAGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	111082017	111070416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_111070676_111076317_111076472_111078287_111078382_111081931
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026983	chr9	-	1120	4	ISM	ENSMUSG00000032503.19	ENSMUST00000162065.8	2996	18	60875	100	60875	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGAGTTTTCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	111953962	111894401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_111895091_111896228_111896378_111948250_111948378_111953807
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026984	chr9	-	699	1	NIC	ENSMUSG00000032503.19	novel	3181	19	NA	NA	119737	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATAGAGTTTTCTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	111895100	111894401	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_111894400_111895100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026985	chr9	-	745	4	NNC	ENSMUSG00000032503.19	novel	2996	18	NA	NA	49118	-8520	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTGATCTTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	111965719	111953807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_111954069_111955502_111955608_111956346_111956524_111965517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026986	chr9	-	704	4	NNC	ENSMUSG00000032503.19	novel	3071	19	NA	NA	38286	-11059	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGAGCTGGCCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	111976551	111956346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_-_111956524_111965517_111965750_111972376_111972607_111976486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026987	chr9	-	1625	1	ISM	ENSMUSG00000032503.19	ENSMUST00000178410.2	3419	5	5322	948	3165	3	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGCACTTTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	112011672	112010047	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_112010000_112011700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026988	chr9	-	2068	5	FSM	ENSMUSG00000032503.19	ENSMUST00000178410.2	3419	5	160	1191	0	-240	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATGTTACTTGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	112016834	112010290	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_112011889_112012562_112012653_112013336_112013379_112014676_112014838_112016657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026989	chr9	-	1147	1	Genic_Genomic	ENSMUSG00000032504.16	novel	NA	NA	NA	NA	55355	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGGAGTATGAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	113481957	113480810	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_113480800_113482000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026990	chr9	-	1133	2	ISM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	52048	-317	52048	317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGCAAATTCTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	113485264	113483222	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_113484176_113485084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026991	chr9	-	1721	1	ISM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	48334	0	48334	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCCATTGAAGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	113807495	113805774	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_113805800_113807500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026992	chr9	-	1891	2	ISM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	47086	561	47086	-561	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTTGAGTCCATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	113808743	113806335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_113808009_113808525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026993	chr9	-	1668	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCTCCGTCCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	114219737	114204201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026994	chr9	+	476	3	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	0	53913	0	-53913	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTGGGCCCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	114230143	114249532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114230338_114246028_114246199_114249420
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026995	chr9	+	465	3	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	55395	10078	55395	-10078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATCTTCATGAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	114285538	114293367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114285616_114288661_114288794_114293111
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026996	chr9	+	778	3	ISM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	58517	150	58517	-150	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACCTCCCACCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	114288660	114303295	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114288794_114293111_114293367_114302905
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026997	chr9	+	429	1	Genic_Genomic	ENSMUSG00000045594.11	novel	NA	NA	NA	NA	72874	1	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTCCTGTCATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	114303017	114303446	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_114303000_114303400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026998	chr9	+	353	3	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	76	19132	76	-4134	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTGGCCTCCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	114517933	114534238	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114518096_114518276_114518351_114534121
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000026999	chr9	+	237	2	FSM	ENSMUSG00000032435.10	ENST00000502347.1	235	2	-1	-1	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGAAGGTTAGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	114518274	114538373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_114518351_114538212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027000	chr9	+	227	2	NNC	ENSMUSG00000032435.10	novel	235	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACGAAGGTTAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	114518276	114538372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_114518351_114538219
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027001	chr9	+	236	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	16263	18178	15845	-3180	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAAGCCTTGGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	114534120	114535192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114534239_114535074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027002	chr9	+	329	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	17284	14993	16866	5	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGTTAGTTTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	114535141	114538377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114535306_114538212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027003	chr9	+	168	1	NIC	ENSMUSG00000032435.10	novel	2601	13	NA	NA	19932	3	mono-exon	FALSE	NA	NA	NA	NA	NA	492	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGAAGGTTAGTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	114538207	114538375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_114538200_114538400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027004	chr9	-	217	2	Antisense	novelGene_ENSMUSG00000032435.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGGGGTCAAAGGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	114538862	114538211	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chr9_-_114538373_114538806
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027005	chr9	+	390	3	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	20355	9083	19937	5915	internal_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTATGTGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	114538212	114544287	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114538383_114542577_114542672_114544161
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027006	chr9	+	248	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	26304	8591	25886	6407	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTTAAAATGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	114544161	114544779	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114544298_114544667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027007	chr9	+	173	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	26809	6380	26391	-6380	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAGCTACATTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	114544666	114546990	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114544780_114546930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027008	chr9	+	190	3	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	29071	3671	28653	-3671	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGCTGGATCCAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	114546928	114549699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114546991_114548925_114548971_114549616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027009	chr9	+	276	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	31758	2444	31340	-2444	internal_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCTGTCTGAGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	114549615	114550926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114549738_114550772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027010	chr9	+	291	2	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	32913	914	32495	-914	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCTTCTGGGTAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	114550770	114552456	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114550926_114552320
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027011	chr9	+	188	1	Genic_Genomic	ENSMUSG00000032435.10	novel	NA	NA	NA	NA	34908	1	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGGTCAAATAACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	114553183	114553371	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_114553200_114553400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027012	chr9	+	1139	2	ISM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	8885	1867	8885	-1867	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCGCCAGATTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	114569125	114576545	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114569226_114575506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027013	chr9	+	1026	1	ISM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	17146	0	17146	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	114577386	114578412	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_114577400_114578400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027014	chr9	-	989	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	4	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCCTTATTGCATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	114610913	114585903	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027015	chr9	-	376	1	ISM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	24635	3	24618	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTCCTTATTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	114586282	114585906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_114585900_114586300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027016	chr9	-	370	3	ISM	ENSMUSG00000032436.18	ENSMUST00000084867.9	874	4	18512	267	18512	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACTGCTCTGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	114592388	114586173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_114586360_114587872_114587955_114592286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027017	chr9	-	815	1	ISM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	33832	0	8921	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGATTGTTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	114729223	114728408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_114728400_114729200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027018	chr9	-	382	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	0	-8	0	8	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGCCAGGCAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	114811807	114811425	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_114811400_114811800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027019	chr9	-	1249	1	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	66592	0	66592	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	115072897	115071648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_115071600_115072900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027020	chr9	-	1513	3	ISM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	61802	280	61802	-280	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTATACAGACTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	115077687	115071928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_115073114_115075112_115075326_115077572
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027021	chr9	-	492	1	FSM	ENSMUSG00000074034.2	ENSMUST00000075898.4	882	1	390	0	390	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTTTTTATATGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	115267259	115266767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_115266800_115267300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027022	chr9	-	3620	1	ISM	ENSMUSG00000032440.14	ENSMUST00000061101.12	8092	8	87353	0	87353	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTACTGGACTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	115916980	115913360	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_115913400_115917000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027023	chr9	-	3716	4	ISM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	65613	-1573	65518	1573	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCGCCCTTCTGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	115938815	115916423	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027024	chr9	+	501	2	ISM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	42	12909	42	-12909	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATTCAGAGAAAGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	117869688	117876643	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_117870027_117876480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027025	chr9	+	426	3	ISM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	6855	10488	6855	-10488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGCCGCTTCCTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	117876501	117879064	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_117876702_117878377_117878504_117878964
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027026	chr9	+	377	2	ISM	ENSMUSG00000039285.13	ENSMUST00000133580.8	2156	8	18497	771	18475	-771	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTCTCTGGAAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	117888121	117891036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_117888244_117890781
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027027	chr9	+	378	1	ISM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	22963	0	22883	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTATTTTGTGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	117892529	117892907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_117892500_117892900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027028	chr9	-	328	1	Genic_Genomic	ENSMUSG00000039163.11	novel	NA	NA	NA	NA	85317	3	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGCAAGATTTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	117893914	117893586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_117893600_117893900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027029	chr9	-	595	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	31	543	17	30	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGGGGAAAAAAAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	117979214	117894132	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027030	chr9	+	697	3	ISM	ENSMUSG00000038708.11	ENST00000444882.5	1388	4	3	55215	3	-55212	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTACTCCGAGGTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	118335316	118356375	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_118335626_118343247_118343338_118356077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027031	chr9	+	406	2	NNC	ENSMUSG00000038708.11	novel	1388	4	NA	NA	7911	-55200	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGGAGCGCGGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	118343245	118356387	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_118343342_118356077
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027032	chr9	+	598	2	ISM	ENSMUSG00000038708.11	ENST00000444882.5	1388	4	20762	390	20741	-387	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCTTTTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	118356075	118411200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_118356390_118410916
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027033	chr9	+	345	1	ISM	ENSMUSG00000038708.11	ENST00000444882.5	1388	4	75932	0	75911	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTCATTGTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	118411245	118411590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_118411200_118411600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027034	chr9	-	183	2	ISM	ENSMUSG00000010651.5	ENSMUST00000010795.5	1689	12	7698	937	7698	-937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTGGGTGTTATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	118978463	118978027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_118978086_118978338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027035	chr9	-	215	2	ISM	ENSMUSG00000010651.5	ENSMUST00000010795.5	1689	12	7397	1310	7397	-1310	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGACGTCATGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	118978764	118978400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_118978519_118978667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027036	chr9	-	126	2	ISM	ENSMUSG00000010651.5	ENSMUST00000010795.5	1689	12	3086	5646	3086	-5646	internal_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGATCGCCTTCCTGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	118983075	118982736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_118982781_118982993
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027037	chr9	-	418	1	ISM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	3690	0	3615	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTGACGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	119165417	119164999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_119165000_119165400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027038	chr9	-	481	2	ISM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	2571	621	2496	-621	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGGAGAATCAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	119166536	119165620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_119165966_119166400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027039	chr9	-	781	4	FSM	ENSMUSG00000032508.9	ENST00000651800.2	720	4	-60	-1	15	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGGGAGCCCTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	119169092	119166417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_119166577_119166819_119166912_119167641_119167777_119168697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027040	chr9	-	808	4	FSM	ENSMUSG00000032508.9	ENST00000417037.8	874	4	67	-1	34	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGGGAGCCCTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	119169073	119166417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_119166577_119166819_119166912_119167071_119167253_119168697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027041	chr9	-	584	3	FSM	ENSMUSG00000032508.9	ENST00000650112.2	585	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGGAGCCCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119169031	119166418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_119166577_119166819_119166912_119168697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027042	chr9	-	160	1	NIC	ENSMUSG00000032508.9	novel	1960	6	NA	NA	2454	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGGAGCCCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	119166578	119166418	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_-_119166400_119166600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027043	chr9	-	442	4	ISM	ENSMUSG00000032508.9	ENST00000652213.1	882	5	1351	10	1351	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGAAGATGACCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	119167681	119166428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_119166577_119166819_119166912_119167090_119167253_119167641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027044	chr9	-	579	4	ISM	ENSMUSG00000032508.9	ENST00000421516.3	926	5	1255	13	1255	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCCCTGAAGATGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	119167777	119166431	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_119166577_119166819_119166912_119167046_119167253_119167641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027045	chr9	-	719	4	ISM	ENSMUSG00000032508.9	ENST00000652213.1	882	5	7	399	7	-399	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTAGGCCTGCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	119169025	119166817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_119166912_119167090_119167253_119167641_119167777_119168697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027046	chr9	-	581	3	ISM	ENSMUSG00000032508.9	ENST00000421516.3	926	5	61	662	61	-662	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAAAGGTTGGTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	119168971	119167080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_119167253_119167641_119167777_119168697
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027047	chr9	+	225	2	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	41	8114	41	-8114	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCCCCTGCGGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119170621	119170985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119170752_119170890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027048	chr9	+	236	3	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	308	5779	308	-5779	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGACTGCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119170888	119173320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119170985_119171788_119171847_119173238
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027049	chr9	+	226	3	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	2656	3463	2656	-3463	internal_fragment	TRUE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTCACAGGCGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119173236	119175636	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119173319_119173531_119173575_119175535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027050	chr9	+	312	3	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	4954	1322	4954	-1322	internal_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCAGGGCCTGGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	119175534	119177777	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119175635_119176795_119176877_119177646
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027051	chr9	+	263	2	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	7116	991	7116	-991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCATGGGCATCGG	NA	NA	NA	NA	NA	NA	NA	NA	119177696	119178108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119177838_119177986
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027052	chr9	+	293	3	ISM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	7697	681	7476	-415	internal_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCGTCGTGGCAGACGG	NA	NA	NA	NA	NA	NA	NA	NA	119178056	119178684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119178167_119178419_119178476_119178557
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027053	chr9	+	272	2	ISM	ENSMUSG00000036138.17	ENSMUST00000175743.8	1219	11	7992	-65	7992	65	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTCTGCGTGGGACACT	NA	NA	NA	NA	NA	NA	NA	NA	119178572	119179164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119178704_119179023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027054	chr9	+	155	1	Genic_Genomic	ENSMUSG00000036138.17	novel	NA	NA	NA	NA	8631	1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCATTTCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	119179211	119179366	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_119179200_119179400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027055	chr9	+	1339	2	ISM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	7354	1849	7354	-1849	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAAGCAATACGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	119281362	119292734	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119281409_119291441
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027056	chr9	+	1298	1	Genic_Genomic	ENSMUSG00000042787.16	novel	NA	NA	NA	NA	19278	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGATTGGCCACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	119293286	119294584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_119293300_119294600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027057	chr9	-	536	3	ISM	ENSMUSG00000032511.18	ENST00000450102.6	6290	26	33590	35945	33590	-35945	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCGCTGGCACATGAT	NA	NA	NA	NA	NA	NA	NA	NA	119358144	119350241	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_119350437_119351543_119351718_119357977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027058	chr9	-	1616	2	ISM	ENSMUSG00000034533.11	ENST00000449082.3	6034	27	80568	-2	80533	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGATATCCTTGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	119442858	119437863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_119439208_119442586
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027059	chr9	+	661	1	ISM	ENSMUSG00000032512.8	ENSMUST00000215307.2	3776	19	31021	0	31021	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCTGGACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	119754992	119755653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_119755000_119755700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027060	chr9	+	732	5	FSM	ENSMUSG00000032519.12	ENST00000643672.1	731	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCCTGCCATGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	119946522	119952841	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_119946604_119949322_119949503_119949738_119949914_119951164_119951327_119952707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027061	chr9	+	1934	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	6	-2	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATACTCACCAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	119956760	119961437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027062	chr9	+	1873	7	NNC	ENSMUSG00000032518.7	novel	1938	7	NA	NA	61	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATACTCACCAGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	119956815	119961437	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_119956897_119957522_119957683_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027063	chr9	+	1583	6	FSM	ENSMUSG00000032518.7	ENSMUST00000217317.2	1599	6	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	119956925	119960625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027064	chr9	+	1166	4	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	91877	11587	91877	-11587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACGCCGAACTCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	120256572	120290618	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120256728_120261418_120262045_120270407_120270648_120290473
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027065	chr9	+	1100	4	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	96758	8339	96758	-8339	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGCCTTTCACGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	120261453	120293866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120262045_120270407_120270648_120290473_120290636_120293759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027066	chr9	+	983	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	52	0	52	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAATGCACTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120321608	120324396	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027067	chr9	+	1008	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	8	-7	8	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCGAGTATAATTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	120400517	120403727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027068	chr9	+	787	6	FSM	ENSMUSG00000025794.10	ENST00000396203.7	815	6	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGTAAATCTCATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120400610	120403492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_120400715_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027069	chr9	+	854	5	NNC	ENSMUSG00000025794.10	novel	682	5	NA	NA	54	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAGTCGAGTATAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	120401214	120403724	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027070	chr9	+	687	2	NNC	ENSMUSG00000025794.10	novel	1009	6	NA	NA	1479	-12	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATTTTGATGAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	120402639	120403708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_120402779_120403160
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027071	chr9	+	577	1	Genic_Genomic	ENSMUSG00000025794.10	novel	NA	NA	NA	NA	1990	7	mono-exon	FALSE	NA	NA	NA	NA	NA	1579	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCGAGTATAATTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	120403150	120403727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_120403200_120403700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027072	chr9	+	774	4	ISM	ENSMUSG00000006932.18	ENST00000643992.1	2827	16	-56	8866	10	-8631	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGTGATGTAACTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120762475	120780215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027073	chr9	+	598	3	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	327	8493	327	-8381	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCGTTGTACTGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120779604	120780465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120779816_120779959_120780214_120780332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027074	chr9	+	528	3	NNC	ENSMUSG00000006932.18	novel	2566	14	NA	NA	499	-8272	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATGGCCAGGGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	120779776	120780574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chr9_+_120779809_120779959_120780214_120780332
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027075	chr9	+	577	3	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	800	8105	800	-7993	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGTGATGAAAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120780077	120780853	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120780214_120780332_120780572_120780651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027076	chr9	+	689	4	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	1061	4636	1061	-4524	internal_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACACAAGTTGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	120780338	120784322	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120780572_120780651_120780854_120781924_120782070_120784213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027077	chr9	+	781	4	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	1393	4215	1393	-4103	internal_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGAGCTCTGTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120780670	120784743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120780854_120781924_120782070_120784213_120784318_120784394
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027078	chr9	+	570	3	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	4974	3914	4974	-3802	internal_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTTTATGAAACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	120784251	120785044	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120784318_120784394_120784734_120784879
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027079	chr9	+	366	2	ISM	ENSMUSG00000006932.18	ENST00000647264.1	2566	14	21870	3896	5114	-3877	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTGTACGAGCACATCA	NA	NA	NA	NA	NA	NA	NA	NA	120784391	120784969	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120784734_120784945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027080	chr9	+	501	3	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	5234	2666	5234	-2554	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTCGGCTTCAGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	120784511	120786292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120784734_120784879_120785039_120786172
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027081	chr9	+	561	4	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	5593	2012	5593	-1900	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCCAGCATTGCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	120784870	120786946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120785039_120786172_120786293_120786582_120786734_120786824
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027082	chr9	+	515	4	ISM	ENSMUSG00000006932.18	ENST00000441708.2	2475	15	7408	300	7408	-188	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGTAGGGTGGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	120786685	120788658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120786734_120786824_120786947_120787657_120787719_120788374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027083	chr9	+	789	4	ISM	ENSMUSG00000006932.18	ENST00000646725.1	2625	15	7555	-135	7555	98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAACACTAATTCATAATC	NA	NA	NA	NA	NA	NA	NA	NA	120786832	120789243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120786947_120787657_120787719_120788374_120788596_120788850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027084	chr9	+	329	1	ISM	ENSMUSG00000006932.18	ENST00000646381.1	3195	17	30207	216	9259	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATTGTGATTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	120788536	120788865	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120788500_120788900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027085	chr9	+	449	1	ISM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	26659	0	9847	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120789124	120789573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_120789100_120789600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027086	chr9	-	760	3	ISM	ENSMUSG00000032532.8	ENSMUST00000216138.2	799	4	1105	-1	306	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTGTCCAGTGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	121323600	121318888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_121319268_121322434_121322598_121323382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027087	chr9	-	187	1	ISM	ENSMUSG00000032532.8	ENSMUST00000216138.2	799	4	5629	0	4830	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTGTCCAGTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121319076	121318889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_121318900_121319100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027088	chr9	-	307	2	FSM	ENSMUSG00000032532.8	ENSMUST00000215228.2	783	2	374	102	374	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGAGGTGGAATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	121323532	121319110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_121319268_121323382
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027089	chr9	-	260	2	ISM	ENSMUSG00000032532.8	ENSMUST00000035120.6	691	3	3	4543	3	-4424	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCGCCTGGGCGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	121324757	121323432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_121323599_121324663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027090	chr9	+	578	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	121539393	121541987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_121539538_121539704_121539782_121541630
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027091	chr9	+	497	1	ISM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	37171	0	37171	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGGTCTTTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	121585412	121585909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_121585400_121585900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027092	chr9	-	2179	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	56	-3	56	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	121687372	121677625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027093	chr9	+	993	5	ISM	ENSMUSG00000032540.17	ENST00000458276.7	1185	6	13488	0	13435	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTCTGATGTACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	122194231	122208875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122208577
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027094	chr9	+	1194	3	ISM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	27173	134	27173	-134	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAAATCTATTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	122207969	122209710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_122208074_122208577_122208964_122209006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027095	chr9	+	767	1	ISM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	28405	745	28281	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCTGTCTAGAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	122209077	122209844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_122209100_122209800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027096	chr9	+	381	1	ISM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	29536	0	29412	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	122210208	122210589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_122210200_122210600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027097	chr9	-	1040	1	ISM	ENSMUSG00000047036.9	ENSMUST00000216063.2	6189	7	13170	2887	9292	1	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGTGTGGAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	122681901	122680861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122680900_122681900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027098	chr9	-	1137	2	ISM	ENSMUSG00000047036.9	ENSMUST00000056467.8	2961	6	7302	1058	7302	-1058	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAGAATTGTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	122683891	122682036	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122683054_122683771
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027099	chr9	-	1205	4	ISM	ENSMUSG00000047036.9	ENST00000396077.8	3128	6	4981	1320	4966	-1204	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAAAACCTTTCGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	122686227	122682182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027100	chr9	-	828	4	FSM	ENSMUSG00000047036.9	ENST00000617032.1	832	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTATCCCCAGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	122691204	122685757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_122685891_122686131_122686227_122686534_122686704_122690773
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027101	chr9	+	857	2	FSM	ENSMUSG00000057895.12	ENST00000399560.2	435	2	1	-423	1	423	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTTACAGCTCGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	122754103	122759263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_122754362_122758664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027102	chr9	+	185	1	NIC	ENSMUSG00000057895.12	novel	2010	4	NA	NA	4555	2	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTGGGAGAAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	122758657	122758842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chr9_+_122758700_122758800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027103	chr9	+	639	1	Genic_Genomic	ENSMUSG00000057895.12	novel	NA	NA	NA	NA	5404	8	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGTTTTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122759506	122760145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_+_122759500_122760100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027104	chr9	-	2509	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	116	736	69	-736	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAGCAGAGTAATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	122779949	122774889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_-_122777174_122777989_122778135_122779869
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027105	chr9	+	652	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	95	294	46	-294	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCCTTCAGTGTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	122850485	122852258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chr9_+_122850636_122851230_122851378_122851903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027106	chr9	+	366	1	ISM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	1796	0	1747	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTGGATATGGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	122852186	122852552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_122852200_122852600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027107	chr9	-	254	1	ISM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	40642	0	28005	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATACAAATCATTTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	122901628	122901374	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122901400_122901600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027108	chr9	-	243	2	ISM	ENSMUSG00000025786.18	ENST00000506315.1	960	6	20141	-6	20141	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCAGCATTGCCACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	122909492	122907220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122907387_122909415
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027109	chr9	-	249	3	ISM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	28891	8106	16254	-2254	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCTCATTTTCACATCA	NA	NA	NA	NA	NA	NA	NA	NA	122913379	122909480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122909547_122912609_122912692_122913278
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027110	chr9	-	222	2	ISM	ENSMUSG00000025786.18	ENST00000506315.1	960	6	11412	6052	11412	-6052	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCAGCATCAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	122918221	122913278	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122913376_122918096
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027111	chr9	-	259	2	ISM	ENSMUSG00000025786.18	ENST00000506315.1	960	6	172	10870	172	-10870	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCGTGGACTTTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	122929461	122918096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122918222_122929327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027112	chr9	-	260	2	ISM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	132	28101	74	-22249	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCCTCTATGCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	122942138	122929475	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_122929658_122942060
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027113	chr9	+	1075	1	ISM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	41772	0	41772	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAAGACTGTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	123349542	123350617	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_123349500_123350600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027114	chr9	+	1527	1	ISM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	61315	0	61192	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGTTGGTACTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	123420138	123421665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_123420100_123421700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027115	chr9	-	607	2	ISM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	16650	2591	16650	-2591	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCCACTCTAGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	123530040	123528667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_123529169_123529934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027116	chr9	-	1189	2	ISM	ENSMUSG00000025241.17	ENST00000535325.5	4279	15	9726	34488	9726	-34488	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTGGCAGGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	123658336	123656149	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_123656243_123657240
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027117	chr9	-	241	2	ISM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	10987	-6	10987	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTATGAGTACTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	124033782	124032981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_124033196_124033755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027118	chr9	-	216	1	Genic_Genomic	ENSMUSG00000110834.2	novel	NA	NA	NA	NA	11572	6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTATGAGTACTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	124033197	124032981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chr9_-_124033000_124033200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027119	chr9	-	1505	1	ISM	ENSMUSG00000074829.11	ENSMUST00000177714.8	2623	4	19388	0	19388	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTATTATCATGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	124055938	124054433	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_-_124054400_124055900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027120	chr9	+	442	2	ISM	ENSMUSG00000093803.6	ENSMUST00000239563.2	4016	11	5991	2297	5991	-2297	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAATAAAAAGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124201817	124202462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_124201908_124202110
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027121	chr9	+	446	1	ISM	ENSMUSG00000093803.6	ENSMUST00000239563.2	4016	11	8487	0	8487	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCTCTGTCCTACGA	NA	NA	NA	NA	NA	NA	NA	NA	124204313	124204759	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chr9_+_124204300_124204800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027122	chrM	+	837	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	746	-1	746	1	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGTGGCAGAGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	1839	2676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_1800_2700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027123	chrM	+	471	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	489	-3	489	3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTCTGATAAAAGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	3239	3710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_3200_3700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027124	chrM	+	575	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	975	-5	975	5	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAATCGAACCCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	6302	6877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_6300_6900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027125	chrM	+	430	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	254	0	254	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACTATGAAGCTAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	7266	7696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_7300_7700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027126	chrM	+	432	1	FSM	ENSMUSG00000064357.1	ENSMUST00000082408.1	681	1	249	0	249	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCCACCAAACTCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	8175	8607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_8200_8600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027127	chrM	+	779	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	6	-1	6	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCTTAGTATAATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	8612	9391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_8600_9400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027128	chrM	+	345	1	FSM	ENSMUSG00000064360.1	ENSMUST00000082411.1	348	1	4	-1	4	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGTAATTAGTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	9462	9807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_9500_9800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027129	chrM	+	1374	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAATATAGTTTACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10170	11544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_10200_11500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027130	chrM	+	880	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	944	0	944	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCGATAATAATAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	12685	13565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_12700_13600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027131	chrM	-	283	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	236	0	236	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGTATAAGATAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	13834	13551	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_-_13600_13800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027132	chrM	+	1146	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	-1	-1	-1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGATAGTATAAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	14143	15289	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrM_+_14100_15300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027133	chrUn_GL456382v1	-	512	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTACTATTGTTGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	14687	14175	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrUn_GL456382v1_-_14200_14700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027134	chrX	-	4765	3	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	24684	-3487	24684	-1864	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTCCTTCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	7028238	7021912	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7026059_7027474_7027692_7027836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027135	chrX	-	660	1	NIC	ENSMUSG00000004317.15	novel	8390	12	NA	NA	26863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTACCTTCTCATCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	7026059	7025399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_7025400_7026100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027136	chrX	-	1333	4	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	20559	2090	20559	-2090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTACACACAACGGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	7032363	7027489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7027692_7027836_7028236_7029568_7029756_7031818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027137	chrX	-	704	3	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	20245	4278	20245	-4278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTATTACCACCACGA	NA	NA	NA	NA	NA	NA	NA	NA	7032677	7029677	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7029756_7031818_7032362_7032594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027138	chrX	-	828	3	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	16151	6439	16151	-6439	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACCTTTGGCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	7036771	7031838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7032362_7032594_7032676_7036547
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027139	chrX	-	662	5	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	8337	6757	8337	-6757	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCACAAACATTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7044585	7032156	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027140	chrX	-	670	5	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	349	11247	349	-11247	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAGGAGGGCCCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	7052573	7036646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027141	chrX	-	666	5	ISM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	98	12029	98	-12029	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGGCATTTGCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	7052824	7037428	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7052675
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027142	chrX	-	334	1	Genic_Genomic	ENSMUSG00000063018.7	novel	NA	NA	NA	NA	8939	4	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATGTGTTCATTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	7278385	7278051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_7278100_7278400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027143	chrX	-	587	2	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	20857	-3	-3201	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTGTGGCTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	7290525	7278341	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7278772_7290368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027144	chrX	-	676	4	ISM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	1635	230	1635	-230	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTTTGTCTTCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	7535994	7534409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027145	chrX	-	529	4	ISM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	-5	1053	-5	-1053	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGCTACGATGCATA	NA	NA	NA	NA	NA	NA	NA	NA	7537634	7535232	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7535257_7535653_7535750_7535841_7535998_7537381
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027146	chrX	-	2025	5	FSM	ENSMUSG00000031147.9	ENST00000616266.4	2048	5	25	-2	25	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATAAGGAGGAGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7546225	7540057	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_7541446_7542071_7542249_7542338_7542608_7543337_7543442_7546138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027147	chrX	+	599	1	ISM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	12533	0	12533	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCGCATTTGTGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	7575902	7576501	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7575900_7576500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027148	chrX	+	1343	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	-3	-1	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTCCTGTGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	7594674	7597304	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_7595002_7595954_7596173_7596506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027149	chrX	+	1335	3	NNC	ENSMUSG00000031149.8	novel	1339	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	7594674	7597303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_7595002_7595954_7596166_7596506
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027150	chrX	+	416	2	ISM	ENSMUSG00000000134.18	ENSMUST00000115678.3	2658	8	2591	7523	2591	-7521	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGGTAAGAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	7632916	7633915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7633095_7633677
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027151	chrX	+	926	2	ISM	ENSMUSG00000000134.18	ENSMUST00000115678.3	2658	8	8376	914	8376	-912	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTCTGGGAATTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	7638701	7640524	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7638836_7639732
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027152	chrX	+	875	1	ISM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	11670	0	10241	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	7640566	7641441	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7640600_7641400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027153	chrX	+	780	1	ISM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	32680	1336	32395	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	7740749	7741529	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7740700_7741500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027154	chrX	+	1508	5	FSM	ENSMUSG00000031156.19	ENSMUST00000115663.10	1527	5	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGTTGGAAAGCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	7750501	7760703	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378_7759107_7760429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027155	chrX	+	838	5	FSM	ENSMUSG00000031156.19	ENST00000376529.8	837	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTGAAGTTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	7750570	7760692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758968_7759107_7760429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027156	chrX	+	504	3	FSM	ENSMUSG00000031156.19	ENST00000635015.1	500	3	0	-4	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTAGCAGGGGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	7750571	7756032	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_7750711_7751987_7752171_7755850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027157	chrX	+	837	5	NNC	ENSMUSG00000031156.19	novel	837	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTGAAGTTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	7750575	7760692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_7750673_7751987_7752171_7755850_7756003_7758968_7759111_7760429
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027158	chrX	+	263	2	ISM	ENSMUSG00000031156.19	ENST00000452555.7	1535	4	15	7313	15	-3959	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGCCTGGGGACCGCT	NA	NA	NA	NA	NA	NA	NA	NA	7750586	7752069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7750673_7751892
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027159	chrX	+	749	4	FSM	ENSMUSG00000031156.19	ENST00000616181.5	1498	4	76	673	76	266	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAAGGCTTCTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	7750647	7758729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_7750711_7751987_7752171_7755850_7756003_7758378
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027160	chrX	+	233	2	ISM	ENSMUSG00000031156.19	ENST00000635015.1	500	3	1391	153	1391	-153	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCATGAGGCTGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7751962	7755875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7752171_7755850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027161	chrX	+	759	1	ISM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	8377	1329	8072	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCATGACCCTGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7758643	7759402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7758600_7759400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027162	chrX	+	563	1	ISM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	9902	0	9597	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGCACTCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	7760168	7760731	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7760200_7760700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027163	chrX	-	213	1	Genic_Genomic	ENSMUSG00000031157.11	novel	NA	NA	NA	NA	4249	1	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGGCTTGAGTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	7760969	7760756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_7760800_7761000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027164	chrX	-	438	3	ISM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	3190	97	3190	31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGTTTCTGTGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	7762028	7760918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7761107_7761403_7761468_7761842
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027165	chrX	-	912	5	ISM	ENSMUSG00000031157.11	ENST00000651767.1	1219	7	50	929	50	-929	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGAACTGGCTCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	7765685	7761878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765327
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027166	chrX	-	239	3	ISM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	45	1797	-25	-1605	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGACCCTTCTTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	7765463	7762554	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7762652_7764789_7764876_7765407
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027167	chrX	+	2269	5	ISM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	1603	0	1603	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGCTGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	7767198	7774590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027168	chrX	+	1865	1	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	7130	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGCTGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	7772725	7774590	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_7772700_7774600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027169	chrX	-	312	1	ISM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	17436	22	16551	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTGCTACAAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	7796692	7796380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7796400_7796700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027170	chrX	-	404	2	ISM	ENSMUSG00000031161.16	ENST00000643934.1	3617	27	15238	1090	15238	-1090	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCAGGGAGCTAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	7798005	7797517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7797621_7797704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027171	chrX	-	383	2	ISM	ENSMUSG00000031161.16	ENST00000643934.1	3617	27	14846	1484	14846	-1484	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGACCTGTGGGCCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	7798397	7797911	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7798199_7798301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027172	chrX	-	520	3	ISM	ENSMUSG00000031161.16	ENST00000643934.1	3617	27	10740	1874	10740	-1874	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGACCTGAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	7802503	7798301	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7798477_7800410_7800561_7802308
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027173	chrX	-	483	4	ISM	ENSMUSG00000031161.16	ENST00000643934.1	3617	27	9023	6841	9023	-6841	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAATGCTGCCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	7804220	7803268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7803315_7803542_7803712_7803865_7803995_7804081
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027174	chrX	-	2433	4	ISM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	3134	-70	3134	70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTCTAGAATGCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	7937363	7927603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027175	chrX	-	876	4	ISM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	1774	-2	1730	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	8010188	8008597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027176	chrX	-	1078	6	ISM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	721	-9	627	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	8011291	8008597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027177	chrX	-	600	1	NIC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	2721	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	8009197	8008597	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_8008600_8009200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027178	chrX	-	1018	6	ISM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	855	30	654	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAGATGAAACCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	8011264	8008627	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027179	chrX	-	686	3	NNC	ENSMUSG00000031167.17	novel	1338	7	NA	NA	1926	-73	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGTATTCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	8009992	8008679	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_8009195_8009489_8009565_8009896
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027180	chrX	-	1194	1	ISM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	20516	0	20226	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATTTCTCTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	8021904	8020710	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_8020700_8021900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027181	chrX	-	1232	2	ISM	ENSMUSG00000039201.11	ENSMUST00000143984.2	2184	5	19446	474	19446	-474	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTTCCCCCACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	8022684	8021203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_8022306_8022554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027182	chrX	-	1723	4	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAGATATTTAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	8059751	8051567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_8052073_8052882_8053014_8056300_8056676_8059039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027183	chrX	-	1743	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAGATATTTAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	8059751	8051567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027184	chrX	-	1730	4	NNC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAGATATTTAATTACT	NA	NA	NA	NA	NA	NA	NA	NA	8059753	8051567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_8052073_8052882_8053014_8056295_8056676_8059039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027185	chrX	-	203	1	ISM	ENSMUSG00000031169.14	ENSMUST00000082320.12	1883	14	12473	2	12449	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGTTTTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8060291	8060088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_8060100_8060300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027186	chrX	-	231	2	ISM	ENSMUSG00000031169.14	ENSMUST00000089403.10	1854	14	8453	271	8453	-271	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGGATGAGAAAAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	8064287	8060359	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_8060517_8064213
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027187	chrX	-	642	3	ISM	ENSMUSG00000031171.12	ENSMUST00000115594.8	1529	13	6838	0	3587	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	8111711	8106658	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_8107070_8111298_8111341_8111522
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027188	chrX	+	2580	1	FSM	ENSMUSG00000052364.5	ENSMUST00000064196.5	2583	1	3	0	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTTGTCTCATAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	8758623	8761203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_8758600_8761200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027189	chrX	-	606	1	Genic_Genomic	ENSMUSG00000031176.9	novel	NA	NA	NA	NA	6153	2	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTCTGGTTGATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	9521109	9520503	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_9520500_9521100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027190	chrX	-	884	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	70	1222	70	890	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATACACCCGCCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	9529172	9521727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027191	chrX	+	764	3	ISM	ENSMUSG00000054453.12	ENSMUST00000067529.9	2301	17	-279	80524	-279	-80524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTAATGGAATCACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	9751581	9780258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_9752019_9771756_9771967_9780141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027192	chrX	-	456	1	ISM	ENSMUSG00000090084.8	ENSMUST00000044789.10	2477	10	78662	588	78585	1	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACTAAAACTCACCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	9905259	9904803	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_9904800_9905300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027193	chrX	-	1093	5	ISM	ENSMUSG00000090084.8	ENST00000432886.6	1694	9	61865	0	61805	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACTAAAACTCACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	9922039	9904804	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_9905340_9913913_9914036_9915854_9915989_9921090_9921271_9921917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027194	chrX	-	708	3	ISM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	62632	143	62572	-143	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTTAGTCCATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	9921272	9904947	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_9905340_9915854_9915989_9921090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027195	chrX	-	501	4	ISM	ENSMUSG00000090084.8	ENSMUST00000115543.3	1218	8	58524	10773	58524	-10773	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTGTATCTACACCCA	NA	NA	NA	NA	NA	NA	NA	NA	9925320	9915918	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_9915989_9921090_9921271_9921917_9922040_9925191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027196	chrX	-	526	4	ISM	ENSMUSG00000090084.8	ENSMUST00000115543.3	1218	8	50004	16025	50004	-16025	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTATGAGCTTCAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	9933840	9921170	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_9921271_9921917_9922040_9925191_9925319_9933663
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027197	chrX	-	338	3	NNC	ENSMUSG00000090084.8	novel	1218	8	NA	NA	50088	-16772	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACTGCTGCTTCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	9933756	9921917	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_9922040_9925191_9925319_9933667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027198	chrX	-	498	3	ISM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	48099	20387	48039	-20046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTTAAACATGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	9935805	9925191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_9925319_9933663_9933841_9935611
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027199	chrX	-	616	4	ISM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	8	28886	8	-28545	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGCCGACCAGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	9983896	9933690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_9933841_9935611_9935804_9940007_9940068_9983682
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027200	chrX	+	553	1	Genic_Genomic	ENSMUSG00000058254.13	novel	NA	NA	NA	NA	110896	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTTTTCTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	10462292	10462845	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_10462300_10462800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027201	chrX	+	792	1	FSM	ENSMUSG00000068200.7	ENSMUST00000121308.2	477	1	197	-512	197	512	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	10526957	10527749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_10527000_10527700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027202	chrX	+	274	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	161	1587	-62	-1579	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCCGTCACACCGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	10583789	10584342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_10583944_10584222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027203	chrX	+	298	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	165	1556	-58	-1548	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCATCAGCCTCTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	10583793	10584373	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_10583944_10584225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027204	chrX	+	1205	2	FSM	ENSMUSG00000008035.13	ENST00000378474.3	1792	2	4	583	4	-583	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAAGGGCCATGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	10583855	10585338	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_10583948_10584225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027205	chrX	+	1201	1	Genic_Genomic	ENSMUSG00000008035.13	novel	NA	NA	NA	NA	885	8	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACAAGTGTGTGTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10584736	10585937	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_10584700_10585900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027206	chrX	-	795	1	Genic_Genomic	ENSMUSG00000040363.16	novel	NA	NA	NA	NA	24076	3	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTACTTTGCATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	11903770	11902975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_11903000_11903800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027207	chrX	-	1565	3	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	3948	18220	3948	-17335	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCAGCTGGGCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	11923898	11921199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_11921395_11921877_11921932_11922582
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027208	chrX	-	1443	3	ISM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	32	21140	32	-20255	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTTCTATCTATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	11927814	11924119	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_11925430_11926368_11926448_11927760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027209	chrX	-	1333	2	NNC	ENSMUSG00000040363.16	novel	6887	14	NA	NA	1446	-20261	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAATGGATGTTCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	11926400	11924125	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_11925430_11926371
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027210	chrX	-	418	1	Genic_Genomic	ENSMUSG00000087591.8	novel	NA	NA	NA	NA	14798	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTCTTTTTGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	12206437	12206019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_12206000_12206400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027211	chrX	+	322	3	ISM	ENSMUSG00000031007.3	ENST00000636970.1	1087	7	0	10867	0	-10794	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTCATTTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	12454124	12471496	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_12454175_12462394_12462527_12471356
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027212	chrX	+	553	5	ISM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	6874	9716	6874	-9716	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTAGGCTGCTTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	12460998	12472574	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027213	chrX	+	446	4	ISM	ENSMUSG00000031007.3	ENST00000636970.1	1087	7	8298	9044	8298	-8971	internal_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATAGCAATGCTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	12462422	12473319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_12462527_12471356_12471495_12472519_12472574_12473169
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027214	chrX	+	538	5	ISM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	16981	7097	16981	-7097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAACTTTTTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	12471105	12475193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027215	chrX	+	1836	5	ISM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	17314	-3	17229	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTACAGTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	12471353	12483291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027216	chrX	+	816	5	ISM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	17230	-2	17230	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAATTGTGATATAGATT	NA	NA	NA	NA	NA	NA	NA	NA	12471354	12482292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_12471495_12472519_12472574_12473169_12473320_12475093_12475194_12481920
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027217	chrX	+	279	2	ISM	ENSMUSG00000031007.3	ENST00000423649.2	1007	7	19036	7097	19036	-7097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAACTTTTTGGATCC	NA	NA	NA	NA	NA	NA	NA	NA	12473160	12475193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_12473320_12475073
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027218	chrX	+	456	1	NIC	ENSMUSG00000031007.3	novel	2324	9	NA	NA	27792	1	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGAAATACGCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	12481916	12482372	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_12481900_12482400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027219	chrX	-	1306	1	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	17484	0	17361	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	12522423	12521117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_12521100_12522400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027220	chrX	-	1607	3	ISM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	10866	317	10743	-317	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAAGGGTGGACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	12529041	12521434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_12522726_12524100_12524264_12528888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027221	chrX	-	1006	4	FSM	ENSMUSG00000044148.7	ENST00000378426.5	1013	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGGGATGAAGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	12539777	12528888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_12529069_12530738_12530889_12535765_12535929_12539264
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027222	chrX	+	1065	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	193	-1	193	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAGACTGTGGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	12803303	12804368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_12803300_12804400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027223	chrX	+	632	1	Genic_Genomic	ENSMUSG00000087424.2	novel	NA	NA	NA	NA	2616	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCATTTCTGGCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	12910905	12911537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_12910900_12911500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027224	chrX	+	1308	1	FSM	ENSMUSG00000084349.4	ENSMUST00000120557.2	1210	1	0	-98	0	98	mono-exon	FALSE	NA	NA	NA	NA	NA	4806	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCTTGAGACACCCA	NA	NA	NA	NA	NA	NA	NA	NA	13068809	13070117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_13068800_13070100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027225	chrX	+	224	3	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	3898	6378	3898	-6378	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGTGGCTTTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	13151160	13153513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_13151202_13152272_13152406_13153463
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027226	chrX	+	1005	3	ISM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	9914	1492	9914	-1492	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCCATTCCAGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	13157176	13158399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_13157294_13157401_13157542_13157651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027227	chrX	+	2002	2	ISM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	10160	381	10160	-360	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATGTAATATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	13157422	13159531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_13157545_13157651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027228	chrX	+	2157	1	ISM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	10817	109	10763	1	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATATTCTGGTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	13158025	13160182	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_13158000_13160200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027229	chrX	-	484	1	ISM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	325066	3912	5293	2	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCCTTTGGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13387714	13387230	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_13387200_13387700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027230	chrX	+	1456	2	FSM	ENSMUSG00000040229.12	ENST00000378138.5	1702	2	-1	247	-1	-247	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTCATGGATTTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	13499742	13506847	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_13499797_13505445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027231	chrX	+	1451	1	Genic_Genomic	ENSMUSG00000040229.12	novel	NA	NA	NA	NA	5904	1	mono-exon	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCGCACTATTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	13505647	13507098	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_13505600_13507100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027232	chrX	+	1298	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	15347901	15349199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrX_+_15347900_15349200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027233	chrX	+	416	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	27	48623	27	-48623	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGGTAAGTCTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	16485963	16505434	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16486153_16500420_16500516_16505302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027234	chrX	+	292	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	19409	28282	19409	-28282	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATCTGACTACTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	16505345	16525775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16505441_16524806_16524912_16525683
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027235	chrX	+	237	2	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	39745	25359	39745	-25359	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACATTGTCTGTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	16525681	16528698	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16525776_16528555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027236	chrX	+	256	2	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	42655	23018	42655	-23018	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATCTATTATAGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	16528591	16531039	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16528698_16530889
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027237	chrX	+	307	2	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	44951	22012	44951	-22012	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGTAGGTTGCTCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	16530887	16532045	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16531040_16531890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027238	chrX	+	290	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	45952	10233	45952	-10233	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAAACTACATAAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	16531888	16543824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16532051_16539085_16539183_16543793
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027239	chrX	+	180	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	57857	5550	57857	-5550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGTATCATGACTC	NA	NA	NA	NA	NA	NA	NA	NA	16543793	16548507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16543848_16547052_16547111_16548439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027240	chrX	+	212	2	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	62503	3741	62503	-3741	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGAAACTAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	16548439	16550316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16548538_16550202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027241	chrX	+	295	3	ISM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	64327	2406	64327	-2406	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAATGAGCATGTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	16550263	16551651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_16550315_16551220_16551284_16551470
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027242	chrX	+	204	1	Genic_Genomic	ENSMUSG00000025037.7	novel	NA	NA	NA	NA	67918	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGCTTCTCTGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16553854	16554058	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_16553900_16554100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027243	chrX	-	1958	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	25	0	25	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	NA	NA	NA	NA	NA	NA	NA	17438539	17422802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027244	chrX	+	101	2	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	79128	33843	79128	-33843	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGGCAATCTATTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	18108009	18112247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_18108068_18112204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027245	chrX	+	1349	4	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	87107	21947	87107	-21947	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCACCATACCCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	18115988	18124143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_18116094_18116945_18117342_18120242_18121022_18124074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027246	chrX	+	104	2	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	109343	6847	109343	-6847	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAATAGTACCCATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	18138224	18139243	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_18138272_18139186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027247	chrX	+	104	2	ISM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	110434	4726	110434	-4726	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGAACCAGCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	18139315	18141364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_18139329_18141273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027248	chrX	+	1711	3	ISM	ENSMUSG00000037369.18	ENST00000611820.5	6103	30	112387	0	112387	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAATTTTGAAATATCATG	NA	NA	NA	NA	NA	NA	NA	NA	18141268	18146272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_18141401_18143614_18143786_18144864
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027249	chrX	+	1232	1	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	115978	1	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGCCAAATGTAGTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	18144859	18146091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_18144900_18146100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027250	chrX	+	834	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	1311	61	1311	-61	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAACAATTTTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	19927109	19963699	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_19927448_19963203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027251	chrX	+	484	1	ISM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	37478	0	37478	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTATCTAGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	19963276	19963760	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_19963300_19963800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027252	chrX	+	2284	1	ISM	ENSMUSG00000037315.16	ENST00000611250.4	4578	11	92298	0	57125	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCTCTGTCAGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	20383890	20386174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20383900_20386200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027253	chrX	+	838	5	FSM	ENSMUSG00000023070.7	ENST00000457380.5	837	5	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGATGGCCTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	20415923	20426370	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_20416113_20416601_20416781_20418558_20418742_20425593_20425726_20426215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027254	chrX	-	349	1	FSM	ENSMUSG00000084830.3	ENSMUST00000117527.2	174	1	-58	-117	-58	117	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGATAAACAATTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	20447611	20447262	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_20447300_20447600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027255	chrX	-	908	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	20483858	20481564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_20481782_20481952_20482084_20483298
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027256	chrX	+	528	4	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	8457	10831	8457	-10831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGAATGGGCTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	20537593	20538587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20537693_20537928_20538076_20538209_20538387_20538482
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027257	chrX	+	601	5	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	15691	2021	15691	-2021	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGGCCGAAAACTATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	20544827	20547397	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027258	chrX	+	884	4	ISM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	18471	267	18471	-267	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAACTGGGTTCAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	20547607	20549151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20547754_20548141_20548244_20548347_20548449_20548616
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027259	chrX	+	614	1	Genic_Genomic	ENSMUSG00000001924.16	novel	NA	NA	NA	NA	19670	2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTAAGTTCGCATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20548806	20549420	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_20548800_20549400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027260	chrX	+	466	2	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	127	6353	127	-6348	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGGGTCTACTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	20554783	20559766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20555046_20559562
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027261	chrX	+	322	2	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	4905	5730	4905	-5725	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGCAAGATCTCCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	20559561	20560389	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20559771_20560276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027262	chrX	+	213	2	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	6212	4275	6212	-4270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTGGATAGCAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	20560868	20561844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20560986_20561748
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027263	chrX	+	312	3	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	7280	3410	7280	-3405	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGGTGGAAGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	20561936	20562709	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20562001_20562256_20562381_20562585
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027264	chrX	+	290	3	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	7964	3044	7964	-3039	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTGGTGGGTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	20562620	20563075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20562707_20562786_20562885_20562969
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027265	chrX	+	296	3	ISM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	8754	1093	8754	-1088	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCCCCTGCCACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	20563410	20565026	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20563450_20564689_20564768_20564847
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027266	chrX	+	287	1	Genic_Genomic	ENSMUSG00000031065.15	novel	NA	NA	NA	NA	11178	2	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGTTATAAATCATCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20565834	20566121	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_20565800_20566100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027267	chrX	+	696	3	ISM	ENSMUSG00000031066.11	ENST00000377107.7	2953	20	7573	-1	7573	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATGTTCAACAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	20585559	20586517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_20585654_20585831_20585921_20586004
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027268	chrX	+	515	1	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	8016	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATGTTCAACAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	20586002	20586517	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_20586000_20586500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027269	chrX	+	1480	5	FSM	ENSMUSG00000001127.13	ENSMUST00000122312.8	2854	5	1359	15	1347	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTTCTCCAACTATCT	NA	NA	NA	NA	NA	NA	NA	NA	20716163	20719128	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027270	chrX	+	874	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	13	-4	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTGTATAGTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	20736417	20740976	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027271	chrX	-	1798	1	Genic_Genomic	ENSMUSG00000009406.14	novel	NA	NA	NA	NA	2345	7	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGGAAATGAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	20801424	20799626	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_20799600_20801400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027272	chrX	-	2520	4	ISM	ENSMUSG00000009406.14	ENST00000392510.3	1010	5	146	-1621	146	-436	intron_retention	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACTTGCTGGCCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	20803623	20800069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027273	chrX	-	462	4	ISM	ENSMUSG00000009406.14	ENST00000343894.8	729	6	8794	0	-38	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGGAGTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	20808041	20801674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_20801788_20801869_20801910_20803742_20803803_20807792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027274	chrX	-	317	3	NNC	ENSMUSG00000009406.14	novel	729	6	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGGAGTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	20807894	20801674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_20801788_20803700_20803803_20807792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027275	chrX	-	384	3	NNC	ENSMUSG00000009406.14	novel	729	6	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGGAGTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	20807956	20801674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_20801827_20803734_20803803_20807792
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027276	chrX	-	101	1	NIC	ENSMUSG00000009406.14	novel	3548	6	NA	NA	1978	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACCACCACCACCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	20801791	20801690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_20801700_20801800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027277	chrX	-	480	3	ISM	ENSMUSG00000009406.14	ENST00000392510.3	1010	5	-17	1128	-17	-1122	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAAAGTGGAGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	20803786	20802818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_20802903_20803355_20803411_20803445
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027278	chrX	-	669	3	ISM	ENSMUSG00000009406.14	ENST00000343894.8	729	6	507	1826	507	-1804	internal_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCCATTCCTCCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	20816328	20803500	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_20803803_20807792_20808037_20816205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027279	chrX	-	475	3	ISM	ENSMUSG00000009406.14	ENST00000343894.8	729	6	7	6152	7	-6130	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTAGCCGGGCCTTGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	20816828	20807826	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_20808037_20816205_20816321_20816678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027280	chrX	-	478	1	ISM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	145320	14	44261	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	NA	NA	NA	NA	NA	NA	NA	23086001	23085523	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_23085500_23086000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027281	chrX	-	1810	4	ISM	ENSMUSG00000036782.14	ENST00000371876.5	3738	8	16569	761	16569	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGTTGAAGGTGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	23113693	23086285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027282	chrX	+	712	1	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAACCATAATAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	32945944	32946656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrX_+_32945900_32946700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027283	chrX	+	708	2	ISM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	43430	1826	43430	-1826	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCATTTTCCTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	35419192	35433086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_35419281_35432466
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027284	chrX	+	692	1	Genic_Genomic	ENSMUSG00000017057.10	novel	NA	NA	NA	NA	58461	3	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTTTTTTGGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	35434223	35434915	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_35434200_35434900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027285	chrX	+	344	2	ISM	ENSMUSG00000016239.12	ENST00000422289.3	2804	12	9294	20688	9294	-20532	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGCCAAATCGAAACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	35603171	35605462	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_35603329_35605275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027286	chrX	+	370	1	Genic_Genomic	ENSMUSG00000016239.12	novel	NA	NA	NA	NA	31904	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCAATGTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35625781	35626151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_35625800_35626200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027287	chrX	+	1713	2	FSM	ENSMUSG00000006373.11	ENST00000535419.2	1711	2	-1	-1	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGAGGCTTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	35861846	35869732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_35862268_35868440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027288	chrX	+	870	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	63	924	63	-923	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTACAATTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	35861921	35868808	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_35862268_35865773_35865930_35868440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027289	chrX	+	1304	1	NIC	ENSMUSG00000006373.11	novel	1857	3	NA	NA	6570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGAGGCTTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	35868428	35869732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_35868400_35869700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027290	chrX	+	823	3	ISM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	-1	928	-1	-928	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCGGCTTGATCGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	36059302	36061532	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_36059495_36060495_36060983_36061388
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027291	chrX	+	666	2	NNC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	1	-1483	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGTAAGTTTGCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	36059304	36060977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_36059495_36060501
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027292	chrX	+	1053	3	ISM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	1189	-1	1189	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1322	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCGTTGTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	36060492	36062461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_36060983_36061388_36061530_36062039
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027293	chrX	+	423	1	NIC	ENSMUSG00000016319.4	novel	1240	4	NA	NA	2734	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTCGTTGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36062037	36062460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_36062000_36062500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027294	chrX	-	1378	1	ISM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	14326	0	14212	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGTTTTGATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36113573	36112195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_36112200_36113600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027295	chrX	-	1427	2	ISM	ENSMUSG00000006423.16	ENST00000536133.2	673	6	11401	-1225	11401	1225	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCCACTTAGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	36116384	36113481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_36114816_36116291
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027296	chrX	+	1423	4	ISM	ENSMUSG00000016308.13	ENST00000630695.2	1665	6	806	-1	511	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACACTTTTATTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	36138816	36147879	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_36138846_36145309_36145400_36146251_36146341_36146664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027297	chrX	+	584	3	ISM	ENSMUSG00000016308.13	ENSMUST00000202991.4	715	6	7324	-173	7002	37	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTACTTTTTATACTAA	NA	NA	NA	NA	NA	NA	NA	NA	36145307	36147076	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_36145400_36146260_36146341_36146664
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027298	chrX	+	1219	1	Genic_Genomic	ENSMUSG00000016308.13	novel	NA	NA	NA	NA	8356	2	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACACTTTTATTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	36146661	36147880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_36146700_36147900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027299	chrX	-	1247	3	ISM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	66638	0	66624	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGCTCCATGATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36186685	36175898	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_36176908_36184021_36184067_36186492
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027300	chrX	-	728	1	Genic_Genomic	ENSMUSG00000050379.16	novel	NA	NA	NA	NA	75486	3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	36177823	36177095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_36177100_36177800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027301	chrX	-	751	2	ISM	ENSMUSG00000050379.16	ENSMUST00000053456.11	4673	11	69243	2394	69243	-809	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACCAGCCTAGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	36184066	36179492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_36180199_36184021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027302	chrX	-	241	1	Genic_Genomic	ENSMUSG00000079641.4	novel	NA	NA	NA	NA	2650	8	mono-exon	FALSE	NA	NA	NA	NA	NA	1211	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATAAGGCTTCTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36346405	36346164	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_36346200_36346400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027303	chrX	-	555	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	44	13	44	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTGCCCTTATAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	36349011	36346185	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_36346403_36347637_36347742_36348777
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027304	chrX	-	420	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTATTTTTATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	36454816	36451239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_36451395_36453526_36453617_36454641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027305	chrX	-	164	1	NIC	ENSMUSG00000016427.8	novel	419	3	NA	NA	3412	0	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTTATTTTTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	36451404	36451240	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_36451200_36451400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027306	chrX	+	1035	1	FSM	ENSMUSG00000036537.7	ENSMUST00000046433.7	1223	1	188	0	188	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	36455085	36456120	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_36455100_36456100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027307	chrX	+	391	2	ISM	ENSMUSG00000095180.11	ENSMUST00000239523.1	868	6	949	3473	949	-3470	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGAACTGGAGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	36893271	36893838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_36893357_36893532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027308	chrX	-	1375	1	ISM	ENSMUSG00000036502.15	ENSMUST00000089054.11	3311	9	53753	6	53743	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCACTTACAGGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	37287563	37286188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_37286200_37287600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027309	chrX	-	1511	2	ISM	ENSMUSG00000036502.15	ENSMUST00000089054.11	3311	9	44284	986	44274	-980	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCACTCCAGCATGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	37297032	37287168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_37288534_37296886
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027310	chrX	-	2334	1	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	34614	0	34614	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTGCTCACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37510717	37508383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_37508400_37510700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027311	chrX	-	2543	4	ISM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	25509	59	25509	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTCTGTTTGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	37519822	37508442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027312	chrX	+	2444	2	Antisense	novelGene_ENSMUSG00000016534.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAAAAAAAAAGGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	37508453	37513312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_+_37510735_37513149
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027313	chrX	-	500	2	ISM	ENSMUSG00000031095.16	ENSMUST00000016681.15	3354	20	480	28334	480	-28034	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATTAGTATGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	37652922	37650484	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_37650602_37652539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027314	chrX	+	1179	6	FSM	ENSMUSG00000000355.14	ENST00000371315.3	1127	6	24	-76	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTTTCAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	37689754	37702303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027315	chrX	-	585	1	ISM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	3718	0	3718	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTATTACTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37720246	37719661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_37719700_37720200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027316	chrX	-	610	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	32	807	32	-807	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATGTGAGTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	37723932	37720468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_37721001_37723854
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027317	chrX	-	387	2	Genic_Genomic	ENSMUSG00000085611.4	novel	579	1	NA	NA	1	13	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACTCCCAGGTAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	37775046	37774455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_37774774_37774977
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027318	chrX	-	319	1	FSM	ENSMUSG00000085611.4	ENSMUST00000117113.2	579	1	273	-13	273	13	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACTCCCAGGTAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	37774774	37774455	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_37774500_37774800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027319	chrX	+	393	1	FSM	ENSMUSG00000080896.6	ENSMUST00000117155.2	174	1	28	-247	28	247	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTACATATATACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	38058721	38059114	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_38058700_38059100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027320	chrX	+	524	4	FSM	ENSMUSG00000001986.17	ENST00000616590.4	514	4	1	-11	1	11	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCAAAGCTGTATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	40490068	40512891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_40490135_40490405_40490533_40491677_40491946_40512828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027321	chrX	+	650	3	FSM	ENSMUSG00000001986.17	ENST00000611689.4	640	3	0	-10	0	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAAGCTGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	40490212	40512890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_40490533_40491677_40491946_40512828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027322	chrX	+	618	3	NNC	ENSMUSG00000001986.17	novel	640	3	NA	NA	23	8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATCTCAAAGCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	40490235	40512888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_40490533_40491677_40491939_40512828
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027323	chrX	-	842	1	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	116069	0	116069	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTATATTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	40884709	40883867	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_40883900_40884700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027324	chrX	-	315	2	ISM	ENSMUSG00000031099.17	ENSMUST00000088973.11	4798	23	68739	13754	68619	-13754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAGTCGAGAACTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	46912690	46912263	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_46912455_46912566
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027325	chrX	-	315	2	ISM	ENSMUSG00000031099.17	ENSMUST00000088973.11	4798	23	31164	50810	31044	13887	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGCGAGAATTAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	46950265	46949319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_46949525_46950155
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027326	chrX	-	320	2	ISM	ENSMUSG00000031099.17	ENSMUST00000141084.3	1965	8	12810	2068	12810	-2068	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAATCTAAGGTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	46968499	46965274	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_46965418_46968322
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027327	chrX	+	512	3	ISM	ENSMUSG00000001173.16	ENST00000357121.5	4916	22	34733	5303	-12579	3473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTAAGTGAGGGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	47036586	47049442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_47036750_47037001_47037238_47049329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027328	chrX	+	539	1	ISM	ENSMUSG00000001173.16	ENSMUST00000001202.15	5253	24	52943	0	5041	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	47054206	47054745	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_47054200_47054700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027329	chrX	-	605	1	ISM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	9103	0	9103	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	47114627	47114022	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_47114000_47114600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027330	chrX	-	602	4	ISM	ENSMUSG00000036932.15	ENST00000346424.6	1116	8	33188	-44	33188	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTGTTTTATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	47569035	47563819	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027331	chrX	-	603	4	ISM	ENSMUSG00000036932.15	ENST00000675240.1	2076	16	33242	0	33079	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTATAAATGCACATCAC	NA	NA	NA	NA	NA	NA	NA	NA	47569144	47563863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_47564066_47564439_47564573_47566576_47566702_47569001
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027332	chrX	-	529	4	ISM	ENSMUSG00000036932.15	ENST00000675240.1	2076	16	31402	591	31239	-591	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTGCAAGGAAGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	47570984	47564454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_47564573_47566576_47566702_47569001_47569145_47570841
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027333	chrX	-	806	5	ISM	ENSMUSG00000036932.15	ENST00000675240.1	2076	16	-33	22093	17	-22093	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTTTCCTTGGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	47602419	47585956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027334	chrX	+	1021	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	138	-1	138	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACGTGGCTTTGTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	47608299	47619110	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_47608736_47618525
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027335	chrX	+	577	3	ISM	ENSMUSG00000031105.17	ENSMUST00000177710.2	1516	10	29425	30	29425	-30	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTCTCATTAAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	47742263	47751139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_47742380_47749565_47749647_47750759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027336	chrX	+	415	1	ISM	ENSMUSG00000031105.17	ENST00000543953.5	1362	10	38140	0	37921	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTTGTCTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	47750759	47751174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_47750800_47751200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027337	chrX	+	637	3	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	11301	825	11301	-825	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGAGGAGCTCGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	47795181	47798775	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_47795312_47797766_47797951_47798452
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027338	chrX	+	447	1	ISM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	15273	0	15273	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	47799153	47799600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_47799200_47799600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027339	chrX	-	1475	1	ISM	ENSMUSG00000031109.17	ENSMUST00000167659.8	3632	13	69549	22	69546	1	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGGCAACAGCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	48100080	48098605	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48098600_48100100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027340	chrX	-	1613	3	ISM	ENSMUSG00000031109.17	ENST00000370935.5	3555	12	61856	489	61856	239	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAATGAATATAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	48107770	48099095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48100512_48102373_48102460_48107659
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027341	chrX	+	732	1	FSM	ENSMUSG00000082192.3	ENSMUST00000121891.3	340	1	-129	-263	-129	263	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATCTGCAAATTCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	48749707	48750439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_48749700_48750400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027342	chrX	-	270	1	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	5433	5	5433	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACCATGGTAGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	48871687	48871417	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48871400_48871700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027343	chrX	-	265	2	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	5074	222	5074	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCACTTGTTTACCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	48872046	48871634	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48871830_48871976
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027344	chrX	-	292	2	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	4427	601	4427	-563	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGAGTGGAAGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	48872693	48872013	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48872101_48872488
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027345	chrX	-	276	2	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	4124	1177	4124	-1139	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAGGCATTGGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	48872996	48872589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48872768_48872898
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027346	chrX	-	312	2	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	3122	2096	3122	1715	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCATTCCCTATCATC	NA	NA	NA	NA	NA	NA	NA	NA	48873998	48873508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48873671_48873848
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027347	chrX	-	848	3	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	1112	2437	1112	1374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGAACAGACGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	48876008	48873849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48874137_48874864_48875153_48875735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027348	chrX	-	276	2	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	735	4477	735	-666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAACTTGGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	48876385	48875889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48876015_48876234
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027349	chrX	-	274	2	ISM	ENSMUSG00000031111.17	ENSMUST00000114893.8	2671	11	177	4873	177	-1062	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGATGGCTGTGTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	48876943	48876285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48876526_48876909
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027350	chrX	-	358	2	ISM	ENSMUSG00000031111.17	ENSMUST00000072037.13	2515	13	4611	3737	-2510	2882	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTGCTCAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	48879630	48878960	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48879080_48879391
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027351	chrX	-	454	2	NNC	ENSMUSG00000031111.17	novel	4384	19	NA	NA	-3274	2391	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACACCCTAACACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	48880394	48879451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_48879671_48880159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027352	chrX	-	822	3	ISM	ENSMUSG00000031111.17	ENSMUST00000072037.13	2515	13	1186	4972	1186	1647	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACAACACTGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	48883055	48880195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48880458_48880691_48880977_48882780
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027353	chrX	-	281	2	ISM	ENSMUSG00000031111.17	ENSMUST00000114891.2	1761	5	3157	1046	772	-1046	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTGGCACCCGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	48883469	48882888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_48883069_48883368
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027354	chrX	-	252	2	NNC	ENSMUSG00000031111.17	novel	4441	19	NA	NA	-43	-1710	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGTTCCTGCTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	48884284	48883552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_48883648_48884127
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027355	chrX	+	1817	4	ISM	ENSMUSG00000031112.11	ENST00000394335.6	3010	11	47577	269	47235	-269	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCCATGCTGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	49977897	49981704	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_49977987_49978565_49978629_49978709_49978847_49980176
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027356	chrX	+	1568	1	Genic_Genomic	ENSMUSG00000031112.11	novel	NA	NA	NA	NA	49745	1	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTCGATGTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49980407	49981975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_49980400_49982000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027357	chrX	-	3406	3	FSM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	139	0	139	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACCAGTTATCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	50106756	50092788	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_50095628_50103847_50104161_50106502
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027358	chrX	-	193	1	ISM	ENSMUSG00000036109.18	ENSMUST00000114875.8	4649	7	85560	2811	26143	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGAGTAGCCATTACATT	NA	NA	NA	NA	NA	NA	NA	NA	50209149	50208956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_50209000_50209100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027359	chrX	-	157	1	FSM	ENSMUSG00000083621.2	ENSMUST00000119571.2	408	1	311	-60	311	60	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTGCTGCAAAGAGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	51861315	51861158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_51861200_51861300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027360	chrX	+	964	1	FSM	ENSMUSG00000081684.5	ENSMUST00000117295.2	882	1	-13	-69	-13	69	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGGACCACAACTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	51987451	51988415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_51987500_51988400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027361	chrX	+	415	3	ISM	ENSMUSG00000025626.17	ENST00000370800.4	897	7	7	10974	7	-10974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGCTCATTTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	52005435	52020584	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_52005614_52006042_52006145_52020449
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027362	chrX	+	314	4	ISM	ENSMUSG00000025626.17	ENST00000370800.4	897	7	644	2396	644	-2396	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGTCGCAAAGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	52006072	52029162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_52006145_52020449_52020584_52020857_52020902_52029098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027363	chrX	+	436	3	ISM	ENSMUSG00000025626.17	ENST00000370800.4	897	7	23668	-2	23668	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATTTATATGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	52029096	52031560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_52029269_52029413_52029558_52031440
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027364	chrX	-	696	3	ISM	ENSMUSG00000087365.8	ENSMUST00000129764.8	868	4	403	-3	403	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATACAGGAAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	52145634	52144080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_52144368_52144732_52145042_52145534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027365	chrX	-	351	1	ISM	ENSMUSG00000061082.12	ENSMUST00000074861.9	1041	3	169766	0	44185	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGTTGGATGGTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	52159222	52158871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_52158900_52159200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027366	chrX	-	151	2	NNC	ENSMUSG00000061082.12	novel	155	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGTTTTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52237346	52187298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_52187358_52237254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027367	chrX	-	156	2	NNC	ENSMUSG00000061082.12	novel	155	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGTTTTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52237343	52187298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_52187358_52237246
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027368	chrX	-	163	2	NNC	ENSMUSG00000061082.12	novel	155	2	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTAGTTTTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52237348	52187298	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_52187368_52237254
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027369	chrX	-	1363	3	ISM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	14629	-1	14629	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCTAAGCACAACGACTT	NA	NA	NA	NA	NA	NA	NA	NA	52444750	52433883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_52434867_52436580_52436743_52444532
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027370	chrX	+	306	1	FSM	ENSMUSG00000051851.6	ENSMUST00000063384.4	401	1	95	0	95	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCCACCCCCCATCGCG	NA	NA	NA	NA	NA	NA	NA	NA	52610093	52610399	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_52610100_52610400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027371	chrX	-	1195	1	FSM	ENSMUSG00000067925.5	ENSMUST00000088779.5	1195	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTCTTACTTAGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	52645649	52644454	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_52644500_52645600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027372	chrX	-	718	1	FSM	ENSMUSG00000067924.5	ENSMUST00000088778.5	1232	1	514	0	514	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGGAAATGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	52671861	52671143	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_52671100_52671900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027373	chrX	-	285	1	Genic_Genomic	ENSMUSG00000054626.12	novel	NA	NA	NA	NA	13665	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	52785998	52785713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_52785700_52786000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027374	chrX	-	388	3	ISM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	10521	222	10521	-222	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCTCCTATGAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	52789142	52785936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_52786140_52786458_52786558_52789056
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027375	chrX	-	354	4	ISM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	2193	743	2193	-743	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGCTCATGGTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	52797470	52786457	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_52786558_52789056_52789157_52789849_52789968_52797434
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027376	chrX	-	297	4	ISM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	1474	4135	1474	-4135	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGTTGTTAGTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	52798189	52789849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_52789968_52797434_52797470_52797739_52797804_52798109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027377	chrX	-	268	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTGGCAAATAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	52818075	52817807	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrX_-_52817800_52818100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027378	chrX	-	368	2	ISM	ENSMUSG00000081937.2	ENSMUST00000120469.2	474	4	3339	-128	3339	128	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGTTAACCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	52818654	52817967	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_52818234_52818552
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027379	chrX	+	326	1	Genic_Genomic	ENSMUSG00000085114.2	novel	NA	NA	NA	NA	1534	1	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATATATGGACCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	55364559	55364885	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_55364600_55364900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027380	chrX	+	1427	3	ISM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	49839	0	49834	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAACTACATTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	55550078	55553191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_55550460_55551732_55551827_55552239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027381	chrX	-	433	1	ISM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	8769	3356	8769	2	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGGATTTTTGTGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	55634660	55634227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_55634200_55634700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027382	chrX	-	785	3	FSM	ENSMUSG00000061273.4	ENST00000680510.1	825	3	1	39	-1	-39	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAAAGTCACTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	55643430	55634268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_55634664_55636437_55636542_55643144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027383	chrX	+	258	1	ISM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	53902	296	53716	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGGTGTTGTAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	55709036	55709294	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_55709000_55709300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027384	chrX	+	607	4	ISM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	8264	2799	8257	-1694	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGCTGGGCAGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55833346	55835901	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_55833531_55834503_55834679_55835236_55835407_55835823
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027385	chrX	+	1817	4	ISM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	9412	221	9405	-219	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCCCCTTCTCTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55834494	55838479	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_55834679_55835236_55835407_55835823_55836011_55837203
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027386	chrX	+	1327	1	Genic_Genomic	ENSMUSG00000023092.17	novel	NA	NA	NA	NA	12291	1	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCTTTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	55837380	55838707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_55837400_55838700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027387	chrX	+	262	2	ISM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	134	3040	102	-3040	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACCTTGATAAGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56099076	56099526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_56099126_56099313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027388	chrX	+	300	2	ISM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	395	1630	363	-1630	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGACGCCAACACTAAG	NA	NA	NA	NA	NA	NA	NA	NA	56099337	56100936	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_56099559_56100857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027389	chrX	+	234	1	Genic_Genomic	ENSMUSG00000067873.12	novel	NA	NA	NA	NA	3360	2	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTGGCTCACTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	56102334	56102568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_56102300_56102600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027390	chrX	+	1675	3	ISM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	10495	98	10495	-98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTAAATGCATGCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	56109469	56112445	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_56109567_56110365_56110504_56111005
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027391	chrX	+	1435	1	Genic_Genomic	ENSMUSG00000067873.12	novel	NA	NA	NA	NA	12135	1	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTTGAGTTAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	56111109	56112544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_56111100_56112500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027392	chrX	+	580	3	ISM	ENSMUSG00000031132.2	ENST00000370628.2	1698	4	1830	942	1820	-441	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTGCAGCAGGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	56259322	56268961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_56259457_56263083_56263139_56268570
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027393	chrX	+	455	1	Genic_Genomic	ENSMUSG00000031132.2	novel	NA	NA	NA	NA	11947	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTGTATAGCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	56269449	56269904	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_56269400_56269900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027394	chrX	-	233	2	ISM	ENSMUSG00000031134.17	ENST00000456392.1	910	6	2857	95	2857	-95	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTCCTACAGCAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	56434178	56432537	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_56432741_56434148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027395	chrX	-	233	2	ISM	ENSMUSG00000031134.17	ENST00000456392.1	910	6	1532	2336	1532	-2336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGTGGCATTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	56435503	56434778	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_56434932_56435423
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027396	chrX	-	230	2	ISM	ENSMUSG00000031134.17	ENST00000456392.1	910	6	295	3032	295	-3032	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAAGTGGAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	56436740	56435474	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_56435596_56436631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027397	chrX	+	1683	3	FSM	ENSMUSG00000046180.12	ENSMUST00000118305.8	1684	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCAGCAGTGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	57954720	57965664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_57954780_57956768_57956922_57964193
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027398	chrX	-	1130	4	ISM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	2483	812	2483	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGTTGAATCTGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	58177313	58108316	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027399	chrX	-	295	1	NIC	ENSMUSG00000031137.18	novel	2499	5	NA	NA	70758	2	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTATCACCCATATTA	NA	NA	NA	NA	NA	NA	NA	NA	58109038	58108743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_58108700_58109000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027400	chrX	-	497	4	ISM	ENSMUSG00000031137.18	ENST00000436198.5	867	5	3	4098	2	-4098	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAAAGAAGGAGAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	58296324	58112843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_58112960_58171253_58171358_58177199_58177311_58296158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027401	chrX	+	517	4	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	4370	10308	4370	-10308	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAAAACGCAAAACCGG	NA	NA	NA	NA	NA	NA	NA	NA	59049193	59064493	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_59049361_59049767_59049793_59061521_59061651_59064297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027402	chrX	+	646	4	NNC	ENSMUSG00000031138.5	novel	1302	7	NA	NA	4370	-894	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTAAGTAAACAAAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	59049193	59073907	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_59049365_59061521_59061651_59064297_59064531_59073794
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027403	chrX	+	978	4	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	16697	48	16697	-48	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCCGGTACGTCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	59061520	59074753	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_59061651_59064297_59064531_59073794_59073910_59074253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027404	chrX	+	541	1	ISM	ENSMUSG00000031138.5	ENSMUST00000033477.5	2734	8	29445	1310	29445	8	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTTCCAAAGACAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	59074268	59074809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_59074300_59074800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027405	chrX	+	269	2	FSM	ENSMUSG00000000838.18	ENST00000621447.1	267	2	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGAGCGGTTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	67722366	67723107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_67722474_67722945
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027406	chrX	+	257	2	NNC	ENSMUSG00000000838.18	novel	267	2	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGAGCGGTTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	67722373	67723107	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_67722474_67722950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027407	chrX	-	213	2	Antisense	novelGene_ENSMUSG00000000838.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGCCCGCCTCCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	67723092	67722402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_-_67722467_67722943
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027408	chrX	+	170	1	Genic_Genomic	ENSMUSG00000000838.18	novel	NA	NA	NA	NA	516	1	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGAGCGGTTTCAAACG	NA	NA	NA	NA	NA	NA	NA	NA	67722938	67723108	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_67722900_67723100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027409	chrX	+	1411	3	ISM	ENSMUSG00000000838.18	ENSMUST00000114654.8	4061	16	33449	1285	33434	1017	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTTTGGGGAGATATG	NA	NA	NA	NA	NA	NA	NA	NA	67755856	67760284	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_67756020_67756846_67756930_67759119
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027410	chrX	+	1179	1	Genic_Genomic	ENSMUSG00000000838.18	novel	NA	NA	NA	NA	37970	2	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTGACAGATGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	67760392	67761571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_67760400_67761600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027411	chrX	-	369	1	Antisense	novelGene_ENSMUSG00000071748.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCATCAGGTAACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	67868736	67868367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_-_67868400_67868700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027412	chrX	+	1450	8	FSM	ENSMUSG00000031189.13	ENST00000370458.5	1450	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTTTTAAAGACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	68404334	68828812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_68404445_68567041_68567163_68588014_68588876_68737549_68737595_68768647_68768685_68769018_68769053_68810787_68810885_68828667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027413	chrX	+	657	2	ISM	ENSMUSG00000031189.13	ENST00000286437.7	7430	17	169984	4282	169984	144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAACAAGGGACCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	68907531	68911787	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_68907717_68911315
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027414	chrX	+	619	1	ISM	ENSMUSG00000031189.13	ENST00000286437.7	7430	17	177903	0	177903	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCTTCCACTGAAGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	68915450	68916069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_68915400_68916100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027415	chrX	+	1102	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	0	-8	0	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTAGCTCCCTTTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	69429482	69433031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_69429758_69431499_69431773_69432477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027416	chrX	+	1071	3	NNC	ENSMUSG00000045237.6	novel	1094	3	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	69429499	69433023	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_69429758_69431505_69431773_69432477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027417	chrX	+	1059	3	NNC	ENSMUSG00000045237.6	novel	1094	3	NA	NA	27	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTAGCTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	69429509	69433025	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_69429758_69431499_69431763_69432477
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027418	chrX	-	975	1	Genic_Genomic	ENSMUSG00000073139.10	novel	NA	NA	NA	NA	16457	4	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTTTATTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	69504329	69503354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_69503400_69504300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027419	chrX	-	1302	4	ISM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	9942	624	9942	582	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAGATGGATGGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	69510844	69503982	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027420	chrX	-	2034	1	ISM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	70552	0	70533	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGATGTGATCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	70465699	70463665	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_70463700_70465700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027421	chrX	-	181	2	ISM	ENSMUSG00000035776.15	ENSMUST00000114587.3	973	9	68773	-2	68550	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAAGTTTCTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	70467682	70466227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_70466356_70467629
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027422	chrX	-	441	6	ISM	ENSMUSG00000035776.15	ENST00000355149.8	544	7	41951	0	41951	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACTTCTCAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	70494281	70467629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484212_70494212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027423	chrX	+	1743	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70599533	70604282	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027424	chrX	+	949	1	Genic_Genomic	ENSMUSG00000015217.12	novel	NA	NA	NA	NA	3739	1	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTCACCAGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70603334	70604283	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_70603300_70604300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027425	chrX	+	719	3	ISM	ENSMUSG00000073131.13	ENSMUST00000114577.8	4652	4	33	4527	33	-4527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTTACGTACTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	70859562	70863785	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_70859941_70860076_70860306_70863673
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027426	chrX	+	1833	2	ISM	ENSMUSG00000073131.13	ENSMUST00000114575.4	4290	3	3275	2182	3275	-2182	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTATTGTTATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	70863670	70866130	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_70863784_70864410
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027427	chrX	+	1759	1	ISM	ENSMUSG00000073131.13	ENSMUST00000114577.8	4652	4	7024	0	6158	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTGTGTCCTCATTCG	NA	NA	NA	NA	NA	NA	NA	NA	70866553	70868312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_70866600_70868300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027428	chrX	+	1122	5	NNC	ENSMUSG00000033361.14	novel	1114	5	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGAATGAGCACAAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	71006562	71011553	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_71006654_71009420_71009459_71010116_71010273_71010662_71011369_71011422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027429	chrX	+	1121	5	NNC	ENSMUSG00000033361.14	novel	1114	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAATGAGCACAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	71006564	71011552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_71006654_71009420_71009459_71010116_71010273_71010662_71011371_71011422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027430	chrX	+	1117	5	NNC	ENSMUSG00000033361.14	novel	1114	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCGAATGAGCACAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	71006564	71011552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_71006654_71009420_71009459_71010116_71010273_71010662_71011367_71011422
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027431	chrX	-	1199	4	FSM	ENSMUSG00000031347.13	ENSMUST00000033713.11	1026	4	0	-173	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGTGGATTTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	71960462	71957136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027432	chrX	-	1254	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	7	25	7	-25	multi-exon	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATAAATAGTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	71962010	71957162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027433	chrX	+	1234	4	ISM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	34284	376	34284	-376	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTGTGGTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	71996446	72001744	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_71996578_71998677_71998821_71999942_72000046_72000887
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027434	chrX	+	905	1	Genic_Genomic	ENSMUSG00000031349.5	novel	NA	NA	NA	NA	39057	4	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTGCTGGCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	72001219	72002124	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_72001200_72002100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027435	chrX	+	2301	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	207	-3	207	3	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTTATTGCTAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	72272103	72274404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_72272100_72274400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027436	chrX	+	738	4	ISM	ENSMUSG00000031375.18	ENSMUST00000033741.15	2419	8	2	3772	2	-3768	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGACTAGTCTGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	72527209	72535767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_72527369_72534384_72534637_72534923_72535037_72535553
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027437	chrX	+	935	6	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	7134	2589	7134	-2589	internal_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCTGGTTCTCCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	72534374	72536946	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_72534637_72534923_72535037_72535553_72535768_72536328_72536440_72536568_72536663_72536805
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027438	chrX	+	1178	5	ISM	ENSMUSG00000031375.18	ENSMUST00000169489.2	1574	9	8312	712	8312	-712	internal_fragment	TRUE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTCAATCCCAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	72535552	72538823	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_72535768_72536328_72536440_72536568_72536663_72536805_72536945_72538204
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027439	chrX	+	663	1	Genic_Genomic	ENSMUSG00000031375.18	novel	NA	NA	NA	NA	11637	1	mono-exon	FALSE	NA	NA	NA	NA	NA	626	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTGTGCCAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72538877	72539540	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_72538900_72539500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027440	chrX	-	310	1	ISM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	3371	50	2897	1	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCCTTTAGTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	72699959	72699649	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72699600_72700000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027441	chrX	-	504	3	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	2250	72	2250	-72	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACCTTGCACGAACACAT	NA	NA	NA	NA	NA	NA	NA	NA	72700606	72699722	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72699993_72700275_72700421_72700517
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027442	chrX	-	322	2	NNC	ENSMUSG00000002012.14	novel	1556	12	NA	NA	2502	-97	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGACTTGGGAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	72700354	72699747	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_72699989_72700273
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027443	chrX	-	287	2	ISM	ENSMUSG00000002012.14	ENST00000370150.5	1556	12	3130	155	2477	-155	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCTCCCTTTCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	72700379	72699805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72699989_72700275
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027444	chrX	-	323	3	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	2092	623	2092	-623	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGACCCTGCACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72700764	72700273	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72700421_72700517_72700606_72700676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027445	chrX	-	354	4	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	1907	696	1907	-696	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCAGTGTATGACCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	72700949	72700346	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72700421_72700517_72700606_72700676_72700756_72700836
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027446	chrX	-	380	4	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	1648	932	1648	-932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGGACATCCTGGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72701208	72700582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72700606_72700676_72700756_72700836_72700950_72701043
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027447	chrX	-	367	3	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	1403	1216	1403	-1216	internal_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCTTTTGGGATGACATC	NA	NA	NA	NA	NA	NA	NA	NA	72701453	72700866	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72700950_72701043_72701204_72701329
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027448	chrX	-	428	3	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	1093	1384	1093	-1384	internal_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGACGGCTCAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	72701763	72701034	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72701204_72701329_72701450_72701624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027449	chrX	-	292	3	NNC	ENSMUSG00000002012.14	novel	1464	11	NA	NA	1092	-1516	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGTGCAGACATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72701764	72701166	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_72701195_72701325_72701450_72701624
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027450	chrX	-	325	3	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	918	1692	918	-1692	internal_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCAGGATATGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	72701938	72701342	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72701450_72701624_72701764_72701859
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027451	chrX	-	421	4	ISM	ENSMUSG00000002012.14	ENST00000370142.5	1464	11	-4	1974	-4	-1974	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTGGCTGTGCCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	72702860	72701624	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72701764_72701859_72701935_72702293_72702426_72702785
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027452	chrX	-	1027	6	ISM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	3628	0	3628	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTGTGTCTAACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	72756153	72729783	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027453	chrX	-	103	1	NIC	ENSMUSG00000002015.6	novel	1219	8	NA	NA	1743	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTCCCTTTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	72731543	72731440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_72731400_72731500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027454	chrX	-	367	3	FSM	ENSMUSG00000002015.6	ENST00000563143.2	361	3	-5	-1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTCCCTTTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	72733291	72731440	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_72731544_72732265_72732387_72733148
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027455	chrX	+	352	4	ISM	ENSMUSG00000002007.6	ENST00000370101.8	1884	14	53	3373	53	-3373	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATGGAGTCCGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	72818239	72819157	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_72818321_72818498_72818608_72818709_72818798_72819083
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027456	chrX	+	357	4	ISM	ENSMUSG00000002007.6	ENST00000370101.8	1884	14	310	2835	310	-2835	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGTGCCCTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	72818496	72819695	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_72818608_72818709_72818798_72819083_72819172_72819625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027457	chrX	+	414	4	ISM	ENSMUSG00000002007.6	ENST00000370101.8	1884	14	559	2560	559	-2560	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAAGAGCATGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	72818745	72819970	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_72818798_72819083_72819172_72819625_72819733_72819803
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027458	chrX	+	487	3	ISM	ENSMUSG00000002007.6	ENST00000370101.8	1884	14	3541	80	3541	-80	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCTACTTGTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	72821727	72822450	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_72821781_72821859_72821953_72822109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027459	chrX	+	357	2	NNC	ENSMUSG00000002007.6	novel	1884	14	NA	NA	3674	-150	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTTCCATCCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72821860	72822380	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_72821947_72822109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027460	chrX	+	365	1	ISM	ENSMUSG00000002007.6	ENSMUST00000002081.6	1981	15	4156	0	3980	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTGTCTTGGAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	72822166	72822531	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_72822200_72822500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027461	chrX	-	751	6	ISM	ENSMUSG00000002010.18	ENSMUST00000052761.9	1331	13	6188	0	6159	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	72824315	72822568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027462	chrX	-	931	7	ISM	ENSMUSG00000002010.18	ENST00000370093.5	1161	9	5088	0	5088	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTTGTCCCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72825386	72823065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027463	chrX	+	802	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	0	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72830633	72834432	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027464	chrX	+	490	2	FSM	ENSMUSG00000031390.9	ENST00000370049.1	1157	2	668	-1	668	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGATACACCCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	72936899	72937460	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_72937204_72937274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027465	chrX	-	416	1	NIC	ENSMUSG00000031388.15	novel	962	8	NA	NA	4540	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGGTATGCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72960894	72960478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_72960500_72960900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027466	chrX	-	678	5	ISM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	1916	26	1820	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCTTGGGAAATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	72963614	72960506	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027467	chrX	-	405	2	ISM	ENSMUSG00000031388.15	ENSMUST00000114387.8	979	8	3968	69	3908	-36	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCACCTGGTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	72961526	72960561	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_72960889_72961448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027468	chrX	-	1730	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	13	-4	-8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGAGTTTCGTGGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	73129283	73078889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_73080101_73080587_73080939_73129115
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027469	chrX	+	673	2	ISM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	2045	144	2045	-144	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATTTCCTTGCAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	73300480	73305010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73300531_73304387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027470	chrX	+	670	1	FSM	ENSMUSG00000081375.2	ENSMUST00000119926.2	343	1	-119	-208	-119	208	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCCTGGCAGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	73304518	73305188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_73304500_73305200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027471	chrX	+	799	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73314417	73316741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027472	chrX	+	759	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	96	0	96	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73314561	73316741	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027473	chrX	-	727	2	ISM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	7707	0	7569	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTATGCTTAATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	73317635	73316822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73317298_73317383
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027474	chrX	+	496	4	ISM	ENSMUSG00000009995.18	ENST00000369776.8	850	7	957	226	940	27	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCTCCCAGGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	73327553	73332791	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73327624_73331624_73331706_73332056_73332321_73332710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027475	chrX	+	995	3	ISM	ENSMUSG00000009995.18	ENST00000369776.8	850	7	5458	-538	5441	-199	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCCAGGATTCAAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	73332054	73333555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73332321_73332710_73332789_73332904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027476	chrX	+	686	1	ISM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	6767	2	6456	1	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCTGTCTTCTGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	73333069	73333755	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73333100_73333800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027477	chrX	+	602	4	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	-47	3918	19	-3918	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGCCTAGGTGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	73340721	73344377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027478	chrX	+	325	3	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	3413	2666	3413	-2666	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACTCTTCTAGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	73344181	73345629	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73344378_73344929_73344971_73345541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027479	chrX	+	369	3	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	4159	2088	4159	-2088	internal_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGGTTATAGGAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	73344927	73346207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73344971_73345541_73345628_73345967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027480	chrX	+	376	3	ISM	ENSMUSG00000019087.14	ENSMUST00000114171.10	2157	10	4772	1418	4772	-1418	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGTTGGCTGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	73345540	73346877	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73345628_73345967_73346207_73346827
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027481	chrX	+	815	4	ISM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	5306	585	5240	-553	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTTCCTCTTTAACC	NA	NA	NA	NA	NA	NA	NA	NA	73346008	73347742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73346207_73346827_73346876_73346963_73347193_73347402
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027482	chrX	+	406	1	ISM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	7219	0	7153	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTAGATTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73347921	73348327	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73347900_73348300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027483	chrX	+	1277	3	ISM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	5391	0	5391	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	73353994	73355468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73354141_73354243_73354299_73354392
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027484	chrX	+	1079	1	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	5786	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	73354389	73355468	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_73354400_73355500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027485	chrX	-	269	1	ISM	ENSMUSG00000015289.5	ENSMUST00000114153.2	1997	2	1165	885	1146	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTCTAAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73396035	73395766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73395800_73396000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027486	chrX	-	744	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	3	-1	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTCTAAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73397178	73395766	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_73396105_73396450_73396609_73396930
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027487	chrX	-	383	2	ISM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	616	84	573	-83	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTAGGAGCCATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	73396608	73395850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73396105_73396479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027488	chrX	-	392	1	Genic_Genomic	ENSMUSG00000015290.16	novel	NA	NA	NA	NA	2567	3	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATCCTGTGTAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	73409712	73409320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_73409300_73409700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027489	chrX	-	518	2	ISM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	765	1559	765	188	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTAGCAATGGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	73411514	73410882	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73411193_73411306
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027490	chrX	-	556	3	ISM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	18	1982	18	-235	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAAGAGTAATGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	73412261	73411305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73411516_73411758_73411865_73412021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027491	chrX	-	1753	1	NIC	ENSMUSG00000015290.16	novel	1038	7	NA	NA	2253	-1748	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGGGTCCCTTCCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	73414571	73412818	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_73412800_73414600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027492	chrX	-	1890	3	FSM	ENSMUSG00000032806.14	ENSMUST00000114146.8	1902	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	73416840	73412822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_73414618_73416219_73416289_73416814
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027493	chrX	-	1917	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	0	106	0	-106	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCTTTTCGCCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	73416955	73412928	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_73414618_73416219_73416289_73416796
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027494	chrX	-	578	1	ISM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	7976	0	7438	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGAGTCAAGGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	73428902	73428324	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73428300_73428900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027495	chrX	-	998	6	ISM	ENSMUSG00000031399.16	ENST00000322269.10	811	8	4916	-386	4916	-190	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACTGCACTGGTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	73431424	73428556	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027496	chrX	-	583	6	ISM	ENSMUSG00000031399.16	ENST00000322269.10	811	8	3	1294	3	-1294	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGACTGCCAAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	73436337	73430236	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73430323_73430639_73430691_73431043_73431103_73431233_73431444_73434590_73434711_73436280
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027497	chrX	-	1091	4	ISM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	18332	0	18332	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTTGTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73454468	73453088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027498	chrX	+	617	4	ISM	ENSMUSG00000004221.17	ENST00000611176.4	997	7	11	8405	11	-8405	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTTCCCTGGGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	73476428	73483582	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73476613_73477408_73477621_73480769_73480889_73483480
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027499	chrX	+	501	4	ISM	ENSMUSG00000004221.17	ENST00000611176.4	997	7	989	4543	989	-4543	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTGCAGGAGCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	73477406	73487444	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73477621_73480769_73480889_73483480_73483582_73487377
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027500	chrX	+	473	4	ISM	ENSMUSG00000004221.17	ENST00000611176.4	997	7	7061	0	7061	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTACTATGTCCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	73483478	73491987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_73483582_73487377_73487521_73491464_73491527_73491822
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027501	chrX	+	429	3	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	0	12408	0	-11583	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTCTGTGTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	74139459	74140975	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74139734_74140439_74140508_74140888
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027502	chrX	+	376	3	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	1922	8403	1922	-8403	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATTAGGTGAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	74142359	74144155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74142554_74143635_74143701_74144038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027503	chrX	+	377	3	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	3600	6413	3600	-6413	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTCTGGTTATGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	74144037	74146145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74144166_74144595_74144727_74146027
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027504	chrX	+	505	4	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	4157	3191	4157	-3191	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTCCAAAGGTCAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74144594	74149367	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74144727_74146027_74146172_74147945_74148067_74149259
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027505	chrX	+	344	3	ISM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	7508	2571	7508	-2571	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGATGGAGTTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	74147945	74149987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74148067_74149259_74149379_74149883
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027506	chrX	+	578	3	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	11300	727	10322	98	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATGAGCATTTTCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	74150759	74152656	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74150857_74151784_74151911_74152301
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027507	chrX	+	356	1	ISM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	13568	0	12590	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	74153027	74153383	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74153000_74153400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027508	chrX	+	2214	4	ISM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	4804	194	4804	-194	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGGAGTGGTCATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	74430808	74439871	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74430859_74434389_74434466_74435245_74435378_74437915
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027509	chrX	+	1999	1	ISM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	12062	0	12062	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCAGACTCCACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	74438066	74440065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74438100_74440100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027510	chrX	-	992	3	FSM	ENSMUSG00000090110.9	ENSMUST00000033543.14	992	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	74460171	74448451	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_74448825_74453151_74453220_74459620
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027511	chrX	-	340	1	ISM	ENSMUSG00000090110.9	ENSMUST00000033543.14	992	3	11370	10	4717	1	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTAAATTTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	74448801	74448461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_74448500_74448800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027512	chrX	-	576	3	FSM	ENSMUSG00000090110.9	ENST00000369479.1	876	3	159	141	159	28	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGGTAGCAGCAAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	74454550	74448603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_74448825_74453151_74453220_74454263
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027513	chrX	+	1055	1	ISM	ENSMUSG00000031201.18	ENSMUST00000033544.14	4310	11	36319	0	36237	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTATGACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	74496552	74497607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74496600_74497600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027514	chrX	+	1436	5	ISM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	2819	0	2819	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGACAATTTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	74560723	74578548	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027515	chrX	-	624	1	Genic_Genomic	ENSMUSG00000016382.16	novel	NA	NA	NA	NA	40683	7	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTAATGATTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74829876	74829252	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_74829300_74829900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027516	chrX	-	847	3	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	35543	641	35543	-636	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCCGCTGAAGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	74835016	74829909	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_74830506_74834567_74834693_74834890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027517	chrX	-	609	2	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	35857	763	35857	-758	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGTAGATAGGAATATT	NA	NA	NA	NA	NA	NA	NA	NA	74834702	74830031	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_74830506_74834567
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027518	chrX	-	582	5	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	30424	5688	30424	-5683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAAACTGGGTCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	74840135	74834956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027519	chrX	-	593	4	ISM	ENSMUSG00000016382.16	ENSMUST00000114057.8	3160	16	41331	10665	25221	-10665	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCAAAGGTCCTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	74845338	74839938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_74840136_74843000_74843097_74844107_74844251_74845181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027520	chrX	-	623	5	ISM	ENSMUSG00000016382.16	ENSMUST00000114058.8	3032	16	10734	15937	10734	-15932	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGAATTAAGCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	74859825	74845205	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027521	chrX	+	758	1	ISM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	151213	0	151213	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	76705831	76706589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_76705800_76706600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027522	chrX	+	523	1	FSM	ENSMUSG00000081049.2	ENSMUST00000118723.2	402	1	-30	-91	-30	91	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGAAATCTCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	78238622	78239145	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_78238600_78239100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027523	chrX	-	740	6	ISM	ENSMUSG00000073077.8	ENST00000313548.5	974	7	1223	74	1223	-74	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAAAGCGCCCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	78472365	78445320	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78445351_78445626_78445722_78454044_78454235_78459090_78459210_78460414_78460497_78472141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027524	chrX	-	721	5	ISM	ENSMUSG00000073077.8	ENST00000313548.5	974	7	50	8802	50	-8802	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGGTATGATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78473538	78454048	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78454235_78459090_78459210_78460414_78460497_78472141_78472364_78473426
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027525	chrX	-	689	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	24981	0	24981	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCAATGTGATTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78534625	78526199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78526341_78532111_78532354_78532640_78532858_78534536
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027526	chrX	-	590	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	24687	6069	24687	-6069	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGAGATTGTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	78534919	78532268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78532354_78532640_78532858_78534536_78534626_78534720
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027527	chrX	-	659	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	19214	8336	19214	-8336	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATTATGCATAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	78540392	78534535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78534626_78534720_78534918_78537283_78537437_78540173
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027528	chrX	-	667	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	17919	8613	17919	-8613	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTAAAAGCTTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	78541687	78534812	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78534918_78537283_78537437_78540173_78540391_78541495
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027529	chrX	-	631	3	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	10653	13974	10653	-13974	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACCATGTGATTTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	78548953	78540173	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78540391_78541495_78541686_78548729
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027530	chrX	-	557	3	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	7951	15293	7951	-15293	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTACATTAGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	78551655	78541492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78541686_78548729_78548966_78551527
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027531	chrX	-	756	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	5481	22530	5481	-22530	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTAGCTCATTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	78554125	78548729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78548966_78551527_78551656_78553481_78553643_78553894
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027532	chrX	-	655	4	ISM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	1297	27281	1297	-27281	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGCAAAAGTAAATTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	78558309	78553480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_78553643_78553894_78554124_78556249_78556389_78558184
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027533	chrX	+	1768	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	0	-700	0	700	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATTAAGATTACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	79500347	79502115	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_79500300_79502100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027534	chrX	+	2163	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	36	1808	36	333	multi-exon	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGATCTTTACTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	80114357	80139670	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_80114767_80127896_80128038_80138057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027535	chrX	+	1727	1	ISM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	25430	0	25430	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTACTTTGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	80139751	80141478	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_80139800_80141500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027536	chrX	+	698	5	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	195303	777200	195303	-645827	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTGTATAAGGAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	83315555	83469376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83315734_83353404_83353547_83356082_83356233_83416988_83417154_83469313
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027537	chrX	+	612	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	296734	728603	296734	-597230	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGGATAAAACAATAATAT	NA	NA	NA	NA	NA	NA	NA	NA	83416986	83517973	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83417154_83469313_83469416_83475489_83475599_83517739
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027538	chrX	+	675	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	355234	627199	355234	-495826	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTGTCAAGCATATCTT	NA	NA	NA	NA	NA	NA	NA	NA	83475486	83619377	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83475599_83517739_83517973_83575479_83575598_83619165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027539	chrX	+	680	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	397530	603715	397530	-472342	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACTTTATTTCTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83517782	83642861	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83517973_83575479_83575598_83619165_83619378_83642701
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027540	chrX	+	653	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	455250	555743	455250	-424370	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGAGTGTTTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	83575502	83690833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83575598_83619165_83619378_83642701_83642857_83690642
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027541	chrX	+	677	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	498913	429269	-472743	-297896	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACATGAATTTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	83619165	83817307	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83619378_83642701_83642857_83690642_83690833_83817187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027542	chrX	+	615	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	522480	420924	-449176	-289551	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTCAGAAGCAGAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	83642732	83825652	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83642857_83690642_83690833_83817187_83817361_83825524
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027543	chrX	+	627	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	570388	385568	-401268	-254195	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGGAGCCCAGAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	83690640	83861008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83690833_83817187_83817361_83825524_83825682_83860903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027544	chrX	+	725	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	696935	384670	-274721	-253297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTTTGTTTTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	83817187	83861906	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83817361_83825524_83825682_83860903_83861025_83861632
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027545	chrX	+	697	4	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	705271	354174	-266385	-222801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATGCTATGAGCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	83825523	83892402	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_83825682_83860903_83861025_83861632_83861902_83892253
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027546	chrX	+	824	3	FSM	ENSMUSG00000045103.20	ENST00000681870.1	815	3	-2	-7	-2	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTGTCCTTTGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	84091922	84115210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_84092066_84097576_84097639_84114591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027547	chrX	+	769	3	NNC	ENSMUSG00000045103.20	novel	815	3	NA	NA	43	4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCATCTGTCCTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84091967	84115207	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_84092066_84097583_84097639_84114591
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027548	chrX	+	623	1	Genic_Genomic	ENSMUSG00000045103.20	novel	NA	NA	NA	NA	22567	5	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATCTGTCCTTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84114585	84115208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_84114600_84115200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027549	chrX	+	613	5	ISM	ENSMUSG00000045103.20	ENSMUST00000113992.3	1858	17	59163	58384	59163	25241	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGCTACCTGCCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	84151181	84187720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027550	chrX	+	754	3	ISM	ENSMUSG00000045103.20	ENST00000681334.1	1246	7	59280	-7	59170	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGGGAAGCCTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	84151188	84162486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84151272_84153548_84153707_84161973
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027551	chrX	+	598	4	ISM	ENSMUSG00000045103.20	ENSMUST00000113992.3	1858	17	101797	23674	101797	-23674	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTAGCTCCTTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	84193815	84222430	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84193885_84196632_84196792_84221309_84221554_84222304
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027552	chrX	+	621	4	ISM	ENSMUSG00000045103.20	ENSMUST00000113992.3	1858	17	104614	11795	104614	-11795	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGACCTGTATCTACAGG	NA	NA	NA	NA	NA	NA	NA	NA	84196632	84234309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84196792_84221309_84221554_84222304_84222429_84234215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027553	chrX	+	968	4	ISM	ENSMUSG00000045103.20	ENSMUST00000239019.2	4179	13	129383	2073	129289	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACACATACATGCACGAAC	NA	NA	NA	NA	NA	NA	NA	NA	84221307	84246581	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84221554_84222304_84222429_84234215_84234309_84246076
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027554	chrX	+	508	1	NIC	ENSMUSG00000045103.20	novel	14910	79	NA	NA	154054	4	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCACACATACATGCACGAA	NA	NA	NA	NA	NA	NA	NA	NA	84246072	84246580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_84246100_84246600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027555	chrX	+	744	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	11338	17014	11338	-17014	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGGATCTCCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	84653011	84658141	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84653191_84657576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027556	chrX	+	691	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	16773	15074	16773	-15074	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGACCTGATGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	84658446	84660081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84659036_84659979
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027557	chrX	+	737	2	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	30090	511	30090	-511	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTTGTGCAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	84671763	84674644	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84671868_84674011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027558	chrX	+	629	1	ISM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	56906	2913	32860	7	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGAGCTATTTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	84674533	84675162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_84674500_84675200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027559	chrX	+	1545	2	FSM	ENSMUSG00000073069.3	ENSMUST00000201779.2	1551	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATTAGAAAGTAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	90375301	90376966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_90375345_90375464
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027560	chrX	+	1507	1	FSM	ENSMUSG00000073069.3	ENSMUST00000101397.2	1143	1	99	-463	99	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATTAGAAAGTAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	90375459	90376966	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_90375500_90377000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027561	chrX	-	702	1	ISM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	23301	0	23243	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	93233014	93232312	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_93232300_93233000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027562	chrX	-	603	2	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	5889	-4	2255	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTTCTCATCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	93579860	93579075	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_93579284_93579465
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027563	chrX	-	769	4	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	4786	0	1152	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	93580963	93579079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027564	chrX	-	687	5	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	4388	386	754	125	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAGTCACTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	93581361	93579465	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027565	chrX	-	775	7	ISM	ENSMUSG00000025151.17	ENST00000485287.5	835	8	243	-2	243	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGCTCCAGGTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	93581872	93579588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_93579852_93580479_93580627_93580895_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027566	chrX	-	875	4	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	2874	2524	-760	-2013	internal_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGGCTGGCATACTGG	NA	NA	NA	NA	NA	NA	NA	NA	93582875	93581603	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_93581672_93581789_93581870_93582050_93582115_93582212
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027567	chrX	-	1296	2	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	1632	3169	1632	-2658	internal_fragment	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCCCCGAGATGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	93584117	93582248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_93582888_93583460
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027568	chrX	-	961	3	ISM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	5	4434	5	-3923	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAGAACGTGGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	93585744	93583513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_93584154_93584856_93584931_93585497
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027569	chrX	-	964	1	ISM	ENSMUSG00000035062.14	ENSMUST00000120620.8	2156	5	18252	0	18227	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGAGTGCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	94683762	94682798	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_94682800_94683800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027570	chrX	-	985	3	ISM	ENSMUSG00000035062.14	ENSMUST00000119640.8	2075	5	14993	717	14993	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTCAGAATCGCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	94686996	94683518	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_94684258_94685769_94685933_94686913
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027571	chrX	+	5838	3	ISM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	26256	0	26256	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGATGGCTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	94968894	94976095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_94968977_94970155_94972177_94972360
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027572	chrX	-	1117	3	ISM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	15965	-1	15965	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCATGGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94984554	94978939	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_94979256_94980977_94981129_94983904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027573	chrX	+	373	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	11	17835	11	-17835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACTTACTACTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	95139658	95194323	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95139850_95185470_95185555_95194225
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027574	chrX	+	456	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	45822	15754	45822	-15754	internal_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTAGAGCCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	95185469	95196404	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95185555_95194225_95194322_95196129
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027575	chrX	+	419	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	54615	14173	54615	-14173	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCTCCCCTGATAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	95194262	95197985	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95194322_95196129_95196405_95197900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027576	chrX	+	488	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	56482	12960	56482	-12960	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGAGCAGAATGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	95196129	95199198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95196405_95197900_95197985_95199069
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027577	chrX	+	494	4	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	58251	8301	58251	-8301	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGCTATATAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	95197898	95203857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95197985_95199069_95199217_95201452_95201550_95203693
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027578	chrX	+	396	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	61801	5055	61801	-5055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCTTGTGTTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	95201448	95207103	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95201550_95203693_95203858_95206972
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027579	chrX	+	443	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	64051	4650	64051	-4650	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCTGGTAAAGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	95203698	95207508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95203858_95206972_95207104_95207355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027580	chrX	+	387	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	67324	3084	67324	-3084	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATACAGAATCCAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	95206971	95209074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95207104_95207355_95207517_95208980
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027581	chrX	+	482	3	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	67706	2402	67706	-2402	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAGGCAGGGCCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	95207353	95209756	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95207517_95208980_95209074_95209530
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027582	chrX	+	567	2	ISM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	69881	1743	69881	-1743	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGGCCCACTGTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	95209528	95210415	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95209756_95210075
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027583	chrX	+	370	1	ISM	ENSMUSG00000031207.17	ENST00000360270.7	3086	14	72142	0	72142	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGACTCAGTCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	95211789	95212159	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_95211800_95212200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027584	chrX	+	654	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	-1	-32	-1	32	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAAAAATATCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	95528463	95529117	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_95528500_95529100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027585	chrX	-	126	1	Genic_Genomic	ENSMUSG00000034457.11	novel	NA	NA	NA	NA	43188	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTTTATTCCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	96377568	96377442	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_96377400_96377600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027586	chrX	-	756	2	ISM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	330607	70	330607	-70	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGCAGTAACTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	97603235	97601299	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_97602012_97603191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027587	chrX	-	323	1	ISM	ENSMUSG00000034403.17	ENSMUST00000113792.2	3038	3	5217	0	4616	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGCGCTTACACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	98509662	98509339	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_98509300_98509700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027588	chrX	-	489	1	ISM	ENSMUSG00000034403.17	ENSMUST00000113792.2	3038	3	4640	411	4039	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTAAAGTTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	98510239	98509750	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_98509800_98510200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027589	chrX	-	1571	2	ISM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	2371	468	2356	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAATTACTTTTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	98511922	98509811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_98511189_98511728
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027590	chrX	-	1234	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	10	1422	10	-1044	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGTTATCCTGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	98514331	98510795	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_98511921_98514222
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027591	chrX	+	1142	3	ISM	ENSMUSG00000059327.10	ENST00000374553.6	4366	7	82338	2880	82338	709	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAGCTATGTTCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	99435934	99441471	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99435991_99438624_99438750_99440510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027592	chrX	+	1038	1	ISM	ENSMUSG00000059327.10	ENSMUST00000113781.8	4915	7	424103	13	89718	1	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCCCTCACCATCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	99443314	99444352	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99443300_99444400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027593	chrX	+	158	2	ISM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	184	21145	184	-21145	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGAAACAAGTCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	99538080	99538586	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99538163_99538510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027594	chrX	+	170	2	ISM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	843	13026	843	-13026	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGGAGGTGGATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	99538739	99546705	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99538805_99546600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027595	chrX	+	112	2	ISM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	8861	10863	8861	-10863	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAAGTAGGTAGTACTA	NA	NA	NA	NA	NA	NA	NA	NA	99546757	99548868	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99546797_99548795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027596	chrX	+	144	2	ISM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	10897	10124	10897	-10124	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAAATACGGAGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	99548793	99549607	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99548876_99549545
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027597	chrX	+	189	2	ISM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	11655	487	11655	-487	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGAGAGTGGGACGACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	99549551	99559244	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99549659_99559162
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027598	chrX	+	113	1	Genic_Genomic	ENSMUSG00000031221.8	novel	NA	NA	NA	NA	21724	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGGACTTTGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	99559620	99559733	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_99559600_99559700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027599	chrX	-	410	1	Genic_Genomic	ENSMUSG00000015668.14	novel	NA	NA	NA	NA	2643	3	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	99666898	99666488	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_99666500_99666900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027600	chrX	-	542	4	ISM	ENSMUSG00000015668.14	ENST00000374454.1	771	7	1352	-85	1341	85	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGATTGGTCACTTATA	NA	NA	NA	NA	NA	NA	NA	NA	99668200	99666713	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027601	chrX	-	335	2	NNC	ENSMUSG00000015668.14	novel	1626	7	NA	NA	2042	17	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATGTCTAGATGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	99667499	99666781	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_99667085_99667467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027602	chrX	-	459	5	ISM	ENSMUSG00000015668.14	ENST00000374454.1	771	7	501	390	490	-390	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCACTTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	99669051	99667188	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027603	chrX	-	521	3	ISM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	343	1912	-279	-1605	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAAACTTATAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	99669831	99668403	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_99668485_99668893_99668994_99669491
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027604	chrX	+	599	2	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	99694	318	99694	-260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGAATTGTCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	99769753	99770560	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99769857_99770064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027605	chrX	+	564	1	ISM	ENSMUSG00000034311.4	ENST00000374403.4	4323	30	100255	0	100255	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTGGGAAGTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99770314	99770878	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99770300_99770900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027606	chrX	+	648	5	ISM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	3762	1840	3711	-1840	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCGCCCCCAGAATGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	99777502	99780335	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_99777654_99777775_99777859_99777969_99778121_99779856_99780079_99780294
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027607	chrX	-	778	1	ISM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	9813	0	9813	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	100256342	100255564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100255600_100256300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027608	chrX	-	205	2	ISM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	8699	274	8685	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTCTAGCTGCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	100257470	100255838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100255953_100257379
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027609	chrX	-	154	2	ISM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	6972	2508	6972	-2508	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGGATCTTTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	100259183	100258072	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100258132_100259088
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027610	chrX	-	133	2	ISM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	251	3524	251	-3524	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGCTCATCTCCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	100265904	100259088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100259185_100265867
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027611	chrX	+	903	3	FSM	ENSMUSG00000042903.9	ENST00000341558.3	1345	3	11	431	11	-431	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCAAGTTCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	100298437	100302408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_100298598_100298762_100298880_100301782
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027612	chrX	+	657	1	ISM	ENSMUSG00000042903.9	ENSMUST00000062000.6	3162	3	4049	1640	3756	0	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAGCACCCCTGATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	100302182	100302839	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_100302200_100302800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027613	chrX	-	474	1	ISM	ENSMUSG00000031304.19	ENSMUST00000033664.14	1670	8	3404	0	3404	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTACAGGGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	100308457	100307983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100308000_100308500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027614	chrX	-	1381	7	FSM	ENSMUSG00000031304.19	ENST00000374188.7	1144	7	7	-244	7	-185	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGCCTCCAACTCACAGG	NA	NA	NA	NA	NA	NA	NA	NA	100311854	100308168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_100308644_100308981_100309049_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027615	chrX	+	1786	4	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	2618	2621	2571	-2621	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	100345386	100362333	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_100346038_100352362_100352513_100358737_100358924_100361534
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027616	chrX	+	1875	3	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	16018	982	15971	-982	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGACCCATCTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	100358786	100363972	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_100358924_100361534_100362325_100363024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027617	chrX	+	988	2	ISM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	18757	1741	18710	-1741	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAACCTGCATGACATGT	NA	NA	NA	NA	NA	NA	NA	NA	100361525	100363213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_100362325_100363024
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027618	chrX	+	1009	1	ISM	ENSMUSG00000031302.17	ENSMUST00000118111.8	8004	7	21175	4612	21133	3	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCCGTTGCACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	100363948	100364957	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_100363900_100365000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027619	chrX	-	947	3	ISM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	3348	3	3337	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCAGCCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	100460067	100458538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100459013_100459366_100459545_100459772
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027620	chrX	-	478	1	NIC	ENSMUSG00000031310.17	novel	5178	24	NA	NA	4388	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCAGCCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	100459016	100458538	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_100458500_100459000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027621	chrX	-	543	3	ISM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	2833	829	2822	-801	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGTACTCACCACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	100460582	100459364	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100459545_100459772_100460068_100460514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027622	chrX	-	988	4	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1401	1231	947	-1206	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCAGATCTTAGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	100462457	100459769	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100460068_100460514_100460582_100460892_100460937_100461878
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027623	chrX	-	641	2	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1	3472	1	-3447	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAAGGGCAGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	100463857	100462010	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_100462559_100463764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027624	chrX	+	606	4	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	6	1821	6	-1821	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACTAGACCAGGAACCG	NA	NA	NA	NA	NA	NA	NA	NA	100492781	100495260	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_100493117_100493210_100493268_100493346_100493493_100495192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027625	chrX	+	639	4	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	2941	-14	2941	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAATGTGCCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	100495716	100497095	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_100495821_100496079_100496194_100496433_100496497_100496737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027626	chrX	+	420	2	ISM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	3646	-1	3646	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAACAAAATGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	100496421	100497082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_100496497_100496737
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027627	chrX	+	346	1	NIC	ENSMUSG00000031312.6	novel	1314	11	NA	NA	3961	1	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAACAAAATGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	100496736	100497082	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_100496700_100497100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027628	chrX	+	447	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	42	0	42	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	101163094	101171275	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027629	chrX	-	2695	1	ISM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	11277	1404	11235	2	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTTCCCTTGAATATT	NA	NA	NA	NA	NA	NA	NA	NA	101189420	101186725	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101186700_101189400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027630	chrX	-	2698	3	FSM	ENSMUSG00000051220.3	ENST00000373657.2	3962	3	69	1195	69	-1195	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTCATTATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	101200586	101187922	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_101190440_101198626_101198735_101200513
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027631	chrX	-	967	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101232988	101228546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230956_101231059_101231427_101231609_101231899_101231978_101232903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027632	chrX	-	936	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	33	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101232967	101228546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230168_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027633	chrX	-	975	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101233000	101228546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027634	chrX	-	965	7	NNC	ENSMUSG00000031320.10	novel	975	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101233000	101228546	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231049_101231427_101231609_101231899_101231978_101232903
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027635	chrX	-	387	1	Genic_Genomic	ENSMUSG00000051159.17	novel	NA	NA	NA	NA	2855	2	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGGTGTGTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	101291371	101290984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_101291000_101291400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027636	chrX	-	565	3	FSM	ENSMUSG00000051159.17	ENST00000431381.5	852	3	2	285	2	-263	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTCTGGTAGTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	101294224	101291272	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_101291615_101292168_101292294_101294126
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027637	chrX	-	530	1	NIC	ENSMUSG00000067567.13	novel	1936	11	NA	NA	147429	1	mono-exon	FALSE	NA	NA	NA	NA	NA	346	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTCGTCCCACCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	101328776	101328246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_101328200_101328800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027638	chrX	-	904	4	ISM	ENSMUSG00000067567.13	ENST00000373583.6	1676	10	99468	0	26887	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTCGTCCCACCGCTC	NA	NA	NA	NA	NA	NA	NA	NA	101449318	101328247	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027639	chrX	-	696	3	ISM	ENSMUSG00000067567.13	ENST00000647594.1	1714	11	102487	6	29918	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTACCACTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101446287	101328310	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101328775_101351215_101351351_101446190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027640	chrX	-	381	3	ISM	ENSMUSG00000067567.13	ENST00000647886.1	1758	12	197416	276	124853	-276	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCACCCCGGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	101351352	101328580	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101328775_101329402_101329482_101351244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027641	chrX	-	241	2	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	197394	344	124846	-344	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAGAAATTACTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	101351359	101328648	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101328775_101351244
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027642	chrX	-	260	3	ISM	ENSMUSG00000067567.13	ENST00000647886.1	1758	12	102481	1120	29918	-1120	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAACTGACCAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	101446287	101329424	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101329482_101351244_101351351_101446190
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027643	chrX	-	637	5	ISM	ENSMUSG00000067567.13	ENST00000373583.6	1676	10	6903	117943	6814	12102	internal_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAGGCTCTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	101541883	101446190	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101446286_101449142_101449316_101471720_101471830_101476090_101476204_101541736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027644	chrX	-	267	3	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	76335	120902	3787	9086	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCGGCAAGTGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	101472418	101449206	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101449316_101471720_101471830_101472369
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027645	chrX	-	258	3	NNC	ENSMUSG00000067567.13	novel	1936	11	NA	NA	3758	9050	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATCCAATGTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	101472447	101449242	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_101449316_101471720_101471824_101472365
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027646	chrX	-	1570	6	FSM	ENSMUSG00000067567.13	ENST00000648962.1	1484	6	-86	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTAAAAGTAATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	101548783	101458292	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_101459200_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027647	chrX	-	725	5	FSM	ENSMUSG00000067567.13	ENST00000373560.7	779	5	55	-1	55	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCATTCACTTACTCGT	NA	NA	NA	NA	NA	NA	NA	NA	101548642	101458883	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_101459200_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027648	chrX	-	317	1	NIC	ENSMUSG00000067567.13	novel	1484	6	NA	NA	17004	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCATTCACTTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	101459201	101458884	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_101458900_101459200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027649	chrX	-	418	3	FSM	ENSMUSG00000067567.13	ENST00000373559.8	413	3	-4	-1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCCCTCCCTTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	101476209	101459009	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_101459200_101471720_101471830_101476090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027650	chrX	-	409	4	ISM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	6902	143416	6846	-12710	internal_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGCAGGAACACCGAGC	NA	NA	NA	NA	NA	NA	NA	NA	101541851	101471720	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101471830_101472369_101472442_101476090_101476204_101541736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027651	chrX	-	280	3	NNC	ENSMUSG00000067567.13	novel	1936	11	NA	NA	2	-12728	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCACATCTGTGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	101476203	101471738	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_101471824_101472365_101472448_101476090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027652	chrX	-	221	3	ISM	ENSMUSG00000067567.13	ENST00000647886.1	1758	12	72624	143436	61	-12730	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATCACATCTGTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	101476144	101471740	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101471830_101472369_101472448_101476090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027653	chrX	-	270	3	NNC	ENSMUSG00000067567.13	novel	1658	11	NA	NA	2	-12732	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTATCACATCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	101476203	101471742	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_101471824_101472365_101472442_101476090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027654	chrX	-	222	3	ISM	ENSMUSG00000067567.13	ENST00000647886.1	1758	12	7002	144064	6931	-13358	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTCAACTGCATGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	101541766	101472368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101472448_101476090_101476204_101541736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027655	chrX	-	248	2	ISM	ENSMUSG00000067567.13	ENST00000648962.1	1484	6	6847	17777	6847	-17059	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCACTCCTAGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	101541850	101476069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_101476204_101541736
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027656	chrX	-	784	1	Genic_Genomic	ENSMUSG00000048949.9	novel	NA	NA	NA	NA	1514	1	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTCCTGAAGTCAAACT	NA	NA	NA	NA	NA	NA	NA	NA	102207498	102206714	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_102206700_102207500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027657	chrX	-	1524	2	FSM	ENSMUSG00000048949.9	ENST00000579008.1	2198	2	75	599	75	-599	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTGATGATGCAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	102208937	102207318	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_102208069_102208163
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027658	chrX	+	673	1	ISM	ENSMUSG00000085715.3	ENSMUST00000152916.2	4306	4	52768	0	36563	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTACACTTAACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	102527890	102528563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_102527900_102528600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027659	chrX	-	625	1	Genic_Genomic	ENSMUSG00000056537.12	novel	NA	NA	NA	NA	23498	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTTTCATCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	103001392	103000767	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_103000800_103001400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027660	chrX	-	1300	1	ISM	ENSMUSG00000087174.8	ENSMUST00000127533.8	3164	6	31600	0	31539	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTCCTAGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104082102	104080802	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_104080800_104082100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027661	chrX	-	155	2	ISM	ENSMUSG00000087174.8	ENSMUST00000127409.8	631	7	22023	60	22023	-60	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGCACCATCTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	104091618	104087666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_104087718_104091514
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027662	chrX	+	798	2	ISM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	2934	1489	2929	-1489	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAATTCCAATACCTG	NA	NA	NA	NA	NA	NA	NA	NA	104126295	104127303	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_104126412_104126621
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027663	chrX	+	497	2	ISM	ENSMUSG00000031226.14	ENSMUST00000119477.2	1239	6	2948	377	2948	-377	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTGCACTATATATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	104126314	104160319	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_104126412_104159919
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027664	chrX	+	743	1	Genic_Genomic	ENSMUSG00000031226.14	novel	NA	NA	NA	NA	4692	9	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTCCAGGTTGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	104128058	104128801	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_104128100_104128800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027665	chrX	+	397	1	ISM	ENSMUSG00000031226.14	ENSMUST00000119477.2	1239	6	36933	0	36933	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGCCAGAGTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104160299	104160696	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_104160300_104160700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027666	chrX	+	3557	1	FSM	ENSMUSG00000031227.9	ENSMUST00000033578.7	3550	1	-5	-2	-5	2	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTCAATAAATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	104163978	104167535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_104164000_104167500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027667	chrX	-	1858	1	ISM	ENSMUSG00000031229.17	ENST00000675732.1	5310	18	46543	0	46543	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTCTTTATTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	104843074	104841216	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_104841200_104843100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027668	chrX	-	551	1	FSM	ENSMUSG00000079965.3	ENSMUST00000116081.3	549	1	-1	-1	-1	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACACTAAGTTTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	104888620	104888069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_104888100_104888600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027669	chrX	-	3549	3	ISM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	32433	-1	32314	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGTTTTTTTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	105023072	105011688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_105015086_105017790_105017882_105023011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027670	chrX	+	555	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	0	446	0	-446	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCTCATTTATTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	105059305	105065610	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_105059477_105063184_105063310_105065351
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027671	chrX	+	258	2	NNC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	3871	-576	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGCCAAGTCAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	105063176	105065480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_105063310_105065355
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027672	chrX	+	285	1	ISM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	6466	0	6466	0	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGGGTTTAAAGTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	105065771	105066056	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_105065800_105066100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027673	chrX	+	409	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	13	9189	13	-9189	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGTACAGACAGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	105230718	105238116	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_105230922_105235612_105235664_105237961
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027674	chrX	+	416	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	7250	6748	7250	-6748	internal_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACCTTGTCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	105237955	105240557	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_105238118_105238237_105238383_105240448
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027675	chrX	+	310	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	7592	5737	7592	-5737	internal_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAGAACACTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	105238297	105241568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_105238383_105240448_105240553_105241447
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027676	chrX	+	305	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	9778	3937	9778	-3937	internal_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGAGCCAATGGCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	105240483	105243368	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_105240553_105241447_105241568_105243252
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027677	chrX	+	361	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	10785	3374	10785	-3374	internal_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGGATGGTGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	105241490	105243931	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_105241568_105243252_105243368_105243762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027678	chrX	+	359	2	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	13054	1085	13054	-1085	internal_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAAGGGCTCCTGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	105243759	105246220	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_105243943_105246044
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027679	chrX	+	507	3	ISM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	15335	235	15335	-235	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAATTCCTTAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	105246040	105247070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_105246223_105246442_105246542_105246844
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027680	chrX	+	192	2	NNC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	15806	-293	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCATCTCAGCTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	105246511	105247012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_105246542_105246850
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027681	chrX	-	700	1	Genic_Genomic	ENSMUSG00000047242.15	novel	NA	NA	NA	NA	12321	2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAACCTTTCATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	105251186	105250486	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_105250500_105251200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027682	chrX	+	1600	3	FSM	ENSMUSG00000073008.12	ENST00000645147.2	3093	3	137	1356	137	-1356	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTCTCAACATCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	106299801	106336838	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_106300106_106312487_106312574_106335628
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027683	chrX	+	1257	1	ISM	ENSMUSG00000073008.12	ENSMUST00000101294.9	4614	5	37457	1581	8989	3	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAAGTCTTAAAAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	106336940	106338197	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_106336900_106338200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027684	chrX	+	722	1	Genic_Genomic	ENSMUSG00000086629.9	novel	NA	NA	NA	NA	-29124	9	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTCAATACTTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	107917867	107918589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_107917900_107918600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027685	chrX	+	1659	3	FSM	ENSMUSG00000086629.9	ENSMUST00000124329.2	1660	3	3	-2	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGAGTAGTTATTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	107946994	108018514	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_107947960_108015726_108015777_108017870
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027686	chrX	-	1541	1	Genic_Genomic	ENSMUSG00000031245.9	novel	NA	NA	NA	NA	7331	1	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTTTGCAATATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	108049679	108048138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_108048100_108049700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027687	chrX	+	1633	2	Antisense	novelGene_ENSMUSG00000031245.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGTTTTCTTCCACG	NA	NA	NA	NA	NA	NA	NA	NA	108048139	108051862	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_+_108049674_108051763
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027688	chrX	-	1727	3	ISM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	2797	0	2797	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTTTGCAATATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108054213	108048139	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_108049678_108051767_108051903_108054159
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027689	chrX	+	1740	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	26	1116	26	-1116	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTATCATCATACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108138996	108204961	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027690	chrX	+	1263	1	ISM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	65844	0	65844	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATTACTTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	108204814	108206077	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_108204800_108206100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027691	chrX	+	222	2	ISM	ENSMUSG00000025525.13	ENST00000511152.1	578	6	3	17908	3	-17908	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTCTATTTTGATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	111243500	111256054	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_111243603_111255934
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027692	chrX	+	279	3	ISM	ENSMUSG00000025525.13	ENSMUST00000113415.2	783	7	34869	21030	12434	-12865	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTTTAAGATATAATCT	NA	NA	NA	NA	NA	NA	NA	NA	111255931	111261097	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_111256055_111259497_111259553_111260996
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027693	chrX	+	236	3	ISM	ENSMUSG00000025525.13	ENST00000511152.1	578	6	16014	10009	16014	-10009	internal_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGTTTACATGAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	111259511	111263953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_111259553_111260996_111261096_111263857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027694	chrX	+	224	3	ISM	ENSMUSG00000025525.13	ENST00000511152.1	578	6	17575	0	17575	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGGTAGAGTTTAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	111261072	111273962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_111261096_111263857_111263950_111273853
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027695	chrX	+	826	4	ISM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	42878	0	20411	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGCTTTGTTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	111263908	111282452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_111263950_111273853_111273968_111274158_111274268_111281890
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027696	chrX	+	111	1	NIC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	30354	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGGTAGAGTTTAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	111273851	111273962	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_111273900_111274000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027697	chrX	+	564	1	NIC	ENSMUSG00000025525.13	novel	1359	9	NA	NA	38391	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGCTTTGTTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	111281888	111282452	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_111281900_111282500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027698	chrX	+	761	3	ISM	ENSMUSG00000025592.18	ENST00000373125.9	2430	12	10	279587	10	-275603	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGCCCCATGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	112207967	112466001	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_112208633_112362154_112362194_112465944
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027699	chrX	+	408	3	ISM	ENSMUSG00000025592.18	ENST00000510272.5	1718	10	0	131022	0	-127038	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGTATACTATGCCAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	112465942	112614566	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_112466058_112549590_112549723_112614405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027700	chrX	+	713	5	ISM	ENSMUSG00000025592.18	ENST00000510272.5	1718	10	83651	20933	83651	-16949	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGGAGACTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	112549593	112724655	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027701	chrX	+	1120	6	ISM	ENSMUSG00000025592.18	ENST00000510272.5	1718	10	194044	0	194044	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCATTTCTCTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	112659986	112745588	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112745095
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027702	chrX	+	1145	5	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	18	28521	18	-28521	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTGCTTTCTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	113384057	113439887	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_113384549_113431324_113431477_113431995_113432133_113435328_113435526_113439719
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027703	chrX	+	916	5	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	47975	9158	47975	-9158	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCACACATAGGCACGGG	NA	NA	NA	NA	NA	NA	NA	NA	113432014	113459250	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_113432133_113435328_113435526_113439719_113439933_113452698_113452886_113459049
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027704	chrX	+	939	5	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	51316	7099	51316	-7099	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGCATTAAACAATAGG	NA	NA	NA	NA	NA	NA	NA	NA	113435355	113461309	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_113435526_113439719_113439933_113452698_113452886_113459049_113459275_113461165
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027705	chrX	+	912	5	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	55732	4544	55732	-4544	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATCATTGCTCCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	113439771	113463864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_113439933_113452698_113452886_113459049_113459275_113461165_113461329_113463688
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027706	chrX	+	932	5	ISM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	68687	0	68687	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTTGTAAAATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	113452726	113468408	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_113452886_113459049_113459275_113461165_113461329_113463688_113463902_113468236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027707	chrX	+	1250	2	FSM	ENSMUSG00000034732.5	ENST00000373105.1	1243	2	0	-7	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATCTTTATTTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	118836690	118839087	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_118836998_118838144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027708	chrX	+	1253	2	NNC	ENSMUSG00000034732.5	novel	1243	2	NA	NA	0	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATCTTTATTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	118836690	118839086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_118837002_118838144
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027709	chrX	-	449	1	Genic_Genomic	ENSMUSG00000067377.13	novel	NA	NA	NA	NA	6918	5	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAATTTTTAGAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	132792260	132791811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_132791800_132792300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027710	chrX	-	730	4	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	3366	451	3366	-451	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGCTGGTAGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	132795812	132792267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027711	chrX	-	501	4	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	1116	3858	1116	-3858	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTCCTTTTAGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	132798062	132795674	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132795812_132796183_132796283_132797431_132797507_132797872
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027712	chrX	-	467	3	ISM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	1	5633	1	-5633	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTCAGACATGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	132799177	132797449	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132797507_132797872_132798062_132798956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027713	chrX	+	736	5	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	154	7996	132	-7996	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAGGCGTAAGTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	132809328	132824567	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_132809528_132809701_132809754_132811265_132811481_132816056_132816144_132824384
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027714	chrX	+	401	2	ISM	ENSMUSG00000031253.16	ENSMUST00000113304.2	2848	11	146	21714	146	-21082	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCTGGGAACTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	132809342	132811481	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_132809528_132811265
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027715	chrX	+	426	3	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	6912	5831	6890	-5831	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGCTGGTAGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	132816086	132826732	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_132816144_132824384_132824577_132826555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027716	chrX	+	317	3	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	15373	5467	15351	-5467	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTACCATCACCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	132824547	132827096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_132824577_132826555_132826733_132826985
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027717	chrX	+	269	2	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	18644	3100	18622	-3100	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACAGTGGTCAGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	132827818	132829463	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_132827944_132829319
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027718	chrX	+	936	4	ISM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	20175	-1	20153	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTAAATGGTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	132829349	132832564	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_132829500_132829804_132829939_132830925_132831048_132832034
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027719	chrX	+	533	1	NIC	ENSMUSG00000031253.16	novel	2290	12	NA	NA	22834	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGTTGTAAATGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	132832030	132832563	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_132832000_132832600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027720	chrX	+	270	1	Genic_Genomic	ENSMUSG00000031253.16	novel	NA	NA	NA	NA	23755	26	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGACTGACCTATGATC	NA	NA	NA	NA	NA	NA	NA	NA	132832951	132833221	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_132833000_132833200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027721	chrX	-	430	1	ISM	ENSMUSG00000031255.15	ENSMUST00000113297.9	3306	14	44951	18	25403	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGAGTGTTTACATTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	132837581	132837151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132837200_132837600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027722	chrX	-	693	3	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	20909	1249	20909	-1249	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGAGTACATAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	132842075	132838400	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132838800_132841071_132841281_132841990
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027723	chrX	-	496	4	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	14422	3919	14422	-3919	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTCTCCTCCATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	132848562	132841070	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132841281_132841990_132842091_132844308_132844418_132848485
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027724	chrX	-	376	3	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	13442	7155	13442	2890	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTCTTTGGGGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	132849542	132844306	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132844418_132848485_132848648_132849439
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027725	chrX	-	2520	2	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	11867	0	11867	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTGTAAATCAGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	132851117	132848331	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132848965_132849230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027726	chrX	-	416	3	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	13038	11334	13038	-154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTCTGCTTTAAAGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	132849946	132848485	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132848648_132849439_132849543_132849795
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027727	chrX	-	379	3	ISM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	11867	12288	11867	-1108	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACATTTGAACCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	132851117	132849439	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132849543_132849795_132849975_132851020
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027728	chrX	-	389	4	ISM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	483	4683	483	-4683	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTTTCCCTGTTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	132862501	132853014	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_132853118_132861415_132861522_132861757_132861868_132862431
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027729	chrX	+	1182	1	ISM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	26441	0	26423	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	132986386	132987568	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_132986400_132987600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027730	chrX	-	564	1	ISM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	53324	0	43855	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTATCTCTAGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	133124407	133123843	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133123800_133124400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027731	chrX	-	566	2	ISM	ENSMUSG00000067369.13	ENST00000372935.5	1718	13	38713	-303	29271	303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGACTGGGACCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	133138991	133124988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133125455_133138891
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027732	chrX	-	159	1	Genic_Genomic	ENSMUSG00000067369.13	novel	NA	NA	NA	NA	4868	1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTGTCTCCGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	133163394	133163235	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_133163200_133163400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027733	chrX	+	613	3	ISM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	43088	404	39254	16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATAGACATGAAGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	133251991	133262981	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_133252213_133261963_133262006_133262631
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027734	chrX	+	760	1	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	49891	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTCCGAATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133262628	133263388	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_133262600_133263400
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027735	chrX	+	687	2	ISM	ENSMUSG00000000223.14	ENSMUST00000113226.2	3499	24	47356	-124	47356	124	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCTGGCTCAACTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	133352906	133353880	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_133353038_133353324
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027736	chrX	-	1006	1	ISM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	3604	0	3604	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGACGAAGAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	133439010	133438004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133438000_133439000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027737	chrX	-	1408	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGCAAGATCAATGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	133442614	133438017	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_133439017_133442205
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027738	chrX	+	484	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	0	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTTTTTCTCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	133486402	133488806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027739	chrX	+	486	5	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	2	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTTTTTCTCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	133486404	133488806	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_133486469_133486826_133486933_133487259_133487332_133488199_133488323_133488685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027740	chrX	+	407	4	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	423	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	133486825	133488805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_133486922_133487259_133487328_133488199_133488323_133488685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027741	chrX	+	387	4	NNC	ENSMUSG00000079435.10	novel	483	5	NA	NA	449	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	133486851	133488805	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_133486933_133487264_133487328_133488199_133488323_133488685
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027742	chrX	-	896	5	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	5543	-6	5543	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTATATAGGCAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	133496110	133490614	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027743	chrX	-	257	1	NIC	ENSMUSG00000031266.8	novel	3172	7	NA	NA	10776	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAACTACTATATAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	133490877	133490620	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_133490600_133490900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027744	chrX	-	679	5	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	4453	1202	4453	-1202	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTCCCCTACTCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	133497200	133491822	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027745	chrX	-	635	5	ISM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	74	3771	74	-3771	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATAAGGTGAGCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	133501579	133494391	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133494475_133495928_133496107_133497023_133497199_133498865_133498972_133501486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027746	chrX	-	370	3	ISM	ENSMUSG00000031266.8	ENST00000675592.1	1030	6	101	5357	101	-5357	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTTGATGGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	133501552	133495977	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133496107_133497023_133497199_133501486
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027747	chrX	+	2315	2	FSM	ENSMUSG00000045427.14	ENSMUST00000113203.2	2315	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	133501973	133507809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_133502083_133505603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027748	chrX	+	2318	2	NNC	ENSMUSG00000045427.14	novel	2315	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATAGTTTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	133501974	133507809	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_133502087_133505603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027749	chrX	+	1123	2	ISM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	1511	1150	1404	-480	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTGCTACTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	133503438	133506653	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_133503512_133505603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027750	chrX	+	1774	3	ISM	ENSMUSG00000045427.14	ENSMUST00000050331.13	1701	4	1441	-148	1426	148	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTTTGAACACTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	133503460	133507281	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_133503512_133503666_133503712_133505603
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027751	chrX	+	1723	1	Genic_Genomic	ENSMUSG00000045427.14	novel	NA	NA	NA	NA	4054	2	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATAGTTTGATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	133506088	133507811	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_133506100_133507800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027752	chrX	+	1501	1	ISM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	2447	0	2397	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	133621165	133622666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_133621200_133622700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027753	chrX	-	1810	3	FSM	ENSMUSG00000050394.15	ENST00000538627.5	1798	3	0	-12	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGCACTGGCCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	133652194	133649208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_133649587_133649658_133650975_133652078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027754	chrX	-	2031	4	NNC	ENSMUSG00000050394.15	novel	2024	4	NA	NA	0	1	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGCACTGGCCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	133652166	133649208	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133650975_133651299_133651380_133651689_133651783_133652074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027755	chrX	-	1747	3	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	27	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACAGGGGCACTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	133652139	133649213	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133649587_133649661_133650975_133652078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027756	chrX	-	1677	2	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	1104	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTAAACAGGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	133650976	133649218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133649581_133649661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027757	chrX	-	1723	3	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	-43	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTAAACAGGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	133652123	133649218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133649581_133649658_133650975_133652078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027758	chrX	-	1678	2	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	1113	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTAAACAGGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	133650967	133649218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133649581_133649651
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027759	chrX	-	1779	3	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	-13	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTAAACAGGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	133652179	133649218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133649587_133649658_133650975_133652084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027760	chrX	-	1800	3	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	4	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTAAACAGGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	133652190	133649218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133649587_133649658_133650975_133652074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027761	chrX	-	1694	2	NNC	ENSMUSG00000050394.15	novel	1798	3	NA	NA	1101	2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTAAACAGGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	133650979	133649218	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133649595_133649661
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027762	chrX	+	2073	2	ISM	ENSMUSG00000049047.12	ENSMUST00000086880.11	2024	5	1468	-340	1428	340	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAGCACTAAATAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	133658823	133661195	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_133658896_133659194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027763	chrX	+	2066	1	ISM	ENSMUSG00000049047.12	ENSMUST00000086884.5	3488	5	2725	18	2725	12	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTAACATTTATTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	133660120	133662186	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_133660100_133662200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027764	chrX	-	2311	2	FSM	ENSMUSG00000033436.14	ENST00000328766.9	2303	2	-3	-5	-3	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTGCTTTAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	133707686	133704888	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_133706620_133707106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027765	chrX	-	2300	2	NNC	ENSMUSG00000033436.14	novel	2303	2	NA	NA	0	3	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCTGGTGCTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	133707683	133704890	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133706614_133707106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027766	chrX	-	2246	2	NNC	ENSMUSG00000033436.14	novel	2303	2	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	133707642	133704893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_133706604_133707106
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027767	chrX	+	2285	2	Antisense	novelGene_ENSMUSG00000033436.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTGGCTTGCTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	133704893	133707664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_+_133706629_133707114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027768	chrX	-	1858	2	ISM	ENSMUSG00000033436.14	ENSMUST00000119010.8	3007	3	234	1041	234	-1039	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAATTATTCATGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	133708040	133705934	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133707763_133708010
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027769	chrX	-	353	2	ISM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	47	4256	47	-4256	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTGGGAGAGATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	133709923	133709151	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_133709249_133709667
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027770	chrX	+	2775	2	FSM	ENSMUSG00000072969.3	ENST00000604957.1	2776	2	6	-5	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	134645148	134648071	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_134646391_134646538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027771	chrX	+	2460	2	NNC	ENSMUSG00000072969.3	novel	2776	2	NA	NA	13	-303	intron_retention	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCCTTGAACATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	134645155	134647763	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_134646395_134646542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027772	chrX	+	1272	2	NNC	ENSMUSG00000072969.3	novel	2776	2	NA	NA	-97	-1082	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTTAGAGCCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	134645568	134646984	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_134646395_134646538
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027773	chrX	+	1276	2	NNC	ENSMUSG00000072969.3	novel	2776	2	NA	NA	507	-466	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTACTAAGGAAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	134646172	134647600	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_134646391_134646542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027774	chrX	+	1293	1	FSM	ENSMUSG00000106264.3	ENSMUST00000196502.3	54	1	-678	-561	-678	561	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCCAGTTCTTTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	134646786	134648079	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_134646800_134648100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027775	chrX	+	663	2	ISM	ENSMUSG00000043384.16	ENSMUST00000166554.2	4993	5	796	4146	796	-4146	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCCCAAGTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	134699132	134700069	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_134699223_134699496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027776	chrX	+	597	1	Genic_Genomic	ENSMUSG00000043384.16	novel	NA	NA	NA	NA	5397	1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAGGTTGGAACAGACT	NA	NA	NA	NA	NA	NA	NA	NA	134703733	134704330	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_134703700_134704300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027777	chrX	+	2817	5	NNC	ENSMUSG00000072964.15	novel	2812	5	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGTTTGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	134786599	134791828	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_134786841_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027778	chrX	+	1081	1	FSM	ENSMUSG00000048040.9	ENSMUST00000058119.9	1532	1	451	0	451	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTAGGTCCATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	134895023	134896104	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_134895000_134896100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027779	chrX	-	728	1	ISM	ENSMUSG00000051579.11	ENSMUST00000163584.8	2358	4	1445	1095	1445	2	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTAAGACTTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	135071555	135070827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_135070800_135071600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027780	chrX	-	929	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	8	313	8	-313	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGATAGGAAAATTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	135073083	135071142	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_135071799_135072384_135072455_135072880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027781	chrX	-	860	3	NNC	ENSMUSG00000051579.11	novel	1250	3	NA	NA	19	-375	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAAATATACAATTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	135073072	135071204	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_135071799_135072380_135072455_135072880
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027782	chrX	+	499	1	ISM	ENSMUSG00000079428.9	ENSMUST00000113116.3	971	3	1561	0	1561	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGACTTGATCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	135126350	135126849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_135126400_135126800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027783	chrX	+	611	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	7	401	7	-401	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTTTCCTGATAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	135145834	135147487	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_135145977_135146449_135146516_135147084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027784	chrX	+	469	3	NNC	ENSMUSG00000042712.11	novel	1019	3	NA	NA	42	-512	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGACGCGTTGGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	135145869	135147376	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_135145981_135146449_135146516_135147084
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027785	chrX	+	455	1	Genic_Genomic	ENSMUSG00000042712.11	novel	NA	NA	NA	NA	1007	5	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCATCAATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135147438	135147893	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_135147400_135147900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027786	chrX	+	686	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	9	235	9	-177	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACCCGTTTGTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	135171018	135172492	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_135171151_135171558_135171632_135172011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027787	chrX	+	828	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCCACAAGAACTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	135171053	135172715	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_135171151_135171558_135171632_135172057
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027788	chrX	+	871	3	FSM	ENSMUSG00000046432.13	ENSMUST00000178632.8	933	3	62	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAATTCAACAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	135171063	135172727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_135171151_135171558_135171632_135172016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027789	chrX	+	485	3	NNC	ENSMUSG00000046432.13	novel	933	3	NA	NA	24	-318	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTATGGGGGAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	135171077	135172351	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_135171151_135171558_135171636_135172016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027790	chrX	+	715	1	Genic_Genomic	ENSMUSG00000046432.13	novel	NA	NA	NA	NA	491	2	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAATTCAACAGTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	135172014	135172729	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_135172000_135172700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027791	chrX	+	2475	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	57	271	57	-271	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACACATACACACACATG	NA	NA	NA	NA	NA	NA	NA	NA	135608787	135611956	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_135608838_135609531
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027792	chrX	+	2446	1	ISM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	1051	0	1051	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACTATAACAAGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	135609781	135612227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_135609800_135612200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027793	chrX	-	1874	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	-3	-12	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGTTCTTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	135642104	135633689	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027794	chrX	-	1858	4	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	135642092	135633690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_135635251_135636294_135636372_135640553_135640633_135641950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027795	chrX	-	1870	4	NNC	ENSMUSG00000031422.17	novel	1859	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	135642103	135633690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_135635251_135636296_135636372_135640553_135640644_135641958
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027796	chrX	-	1854	4	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	135642090	135633690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_135635251_135636296_135636372_135640553_135640633_135641950
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027797	chrX	-	1858	4	NNC	ENSMUSG00000031422.17	novel	1996	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	135642096	135633690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_135635251_135636294_135636372_135640553_135640644_135641965
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027798	chrX	-	623	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	1551	-1	1551	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATAAAGTACTAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	135675160	135658489	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_135658736_135663467_135663618_135673471_135673613_135675074
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027799	chrX	-	405	2	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	13084	0	13084	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTATAAAGTACTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	135663627	135658490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_135658736_135663467
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027800	chrX	-	250	1	NIC	ENSMUSG00000018595.7	novel	1831	9	NA	NA	17971	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTATAAAGTACTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	135658740	135658490	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_135658500_135658700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027801	chrX	-	560	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	1188	5017	1188	-5017	internal_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGAGACTTCGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135675523	135663507	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_135663618_135673471_135673613_135675074_135675158_135675297
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027802	chrX	-	505	4	ISM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	0	16584	0	-16584	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTTTCTAATGAATC	NA	NA	NA	NA	NA	NA	NA	NA	135676711	135675074	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_135675158_135675297_135675522_135676234_135676303_135676581
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027803	chrX	-	278	2	FSM	ENSMUSG00000043463.7	ENST00000674274.1	204	2	1	-75	1	75	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCAGGTCTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	135769314	135767533	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_135767639_135769141
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027804	chrX	-	495	1	ISM	ENSMUSG00000072955.15	ENSMUST00000127404.8	816	4	21387	0	21387	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTGAGCAGATTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	135856231	135855736	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_135855700_135856200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027805	chrX	+	134	1	Genic_Genomic	ENSMUSG00000084205.2	novel	NA	NA	NA	NA	743	87	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGCCTATAAGACCACA	NA	NA	NA	NA	NA	NA	NA	NA	138259959	138260093	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_138260000_138260100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027806	chrX	+	1461	3	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	53891	193	53891	-186	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCCAGTGCAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	138565259	138573701	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_138565334_138566120_138566290_138572483
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027807	chrX	+	1218	1	ISM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	61308	0	61308	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTTCGATTTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	138572676	138573894	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_138572700_138573900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027808	chrX	+	987	2	FSM	ENSMUSG00000047230.7	ENST00000540876.1	2957	2	17	1953	17	-1953	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTAGTGGCTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	138699210	138710177	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_138699295_138709274
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027809	chrX	+	931	1	ISM	ENSMUSG00000047230.7	ENSMUST00000054889.4	3044	2	9624	4	9624	1	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTGTTGTATTGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	138711200	138712131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_138711200_138712100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027810	chrX	+	1103	7	FSM	ENSMUSG00000031432.4	ENST00000643795.2	1318	7	111	104	88	-104	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTCTGAGGTGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	139357449	139376737	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374628_139376479
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027811	chrX	+	290	2	ISM	ENSMUSG00000031432.4	ENST00000372418.4	1385	6	8647	6690	8637	-6690	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGTTATAATTACTATT	NA	NA	NA	NA	NA	NA	NA	NA	139365998	139369708	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_139366164_139369583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027812	chrX	+	1308	3	ISM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	15382	0	15382	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	139372743	139376889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_139372920_139374527_139374688_139375917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027813	chrX	+	974	1	NIC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	18554	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	139375915	139376889	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_139375900_139376900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027814	chrX	-	689	1	ISM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	2971	0	2971	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	NA	NA	NA	NA	NA	NA	NA	139440965	139440276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_139440300_139441000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027815	chrX	-	847	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	191	936	191	-113	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATGAAGAAGCCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	139443745	139441212	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_139441857_139442853_139442906_139443594
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027816	chrX	+	1223	2	ISM	ENSMUSG00000000266.12	ENSMUST00000112988.8	2525	10	-347	85331	17	-85331	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCATCAGGTCGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	139565473	139579413	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_139566028_139578744
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027817	chrX	+	1404	3	ISM	ENSMUSG00000000266.12	ENSMUST00000112993.2	5916	9	83154	3206	83154	-414	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACAGCCGTTCTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	139661930	139665258	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_139662096_139663663_139663872_139664227
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027818	chrX	+	1094	1	ISM	ENSMUSG00000000266.12	ENSMUST00000112990.8	6271	10	98878	2788	85806	4	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTTTCCTCGATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	139664582	139665676	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_139664600_139665700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027819	chrX	+	939	6	FSM	ENSMUSG00000031430.9	ENST00000415430.7	943	6	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGACCATATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	139808286	139833875	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_139808476_139816933_139817101_139820262_139820371_139827071_139827271_139833213_139833370_139833755
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027820	chrX	-	503	1	Genic_Genomic	ENSMUSG00000031429.15	novel	NA	NA	NA	NA	4965	3	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAATTTCTCATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	139849677	139849174	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_139849200_139849700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027821	chrX	-	642	4	FSM	ENSMUSG00000031429.15	ENST00000436861.1	547	4	0	-95	0	95	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTAACTTGATAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	139854642	139849824	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_139850059_139852895_139853063_139853153_139853297_139854544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027822	chrX	-	540	4	NNC	ENSMUSG00000031429.15	novel	547	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCAGAAAGTGAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	139854643	139849919	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_139850051_139852895_139853063_139853153_139853297_139854544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027823	chrX	-	311	3	ISM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	2789	3822	-7	-3080	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGCACCGGGCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	139854649	139852999	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_139853063_139853153_139853301_139854548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027824	chrX	-	380	3	ISM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	2	3976	2	-3234	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGGTCTCTCCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	139857436	139853153	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_139853301_139854548_139854648_139857302
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027825	chrX	+	387	2	ISM	ENSMUSG00000079418.6	ENSMUST00000239541.1	2091	12	87806	714	87806	-714	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTACATGGCGACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	139945500	139946552	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_139945572_139946236
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027826	chrX	+	338	1	Genic_Genomic	ENSMUSG00000079418.6	novel	NA	NA	NA	NA	89239	5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCAGGACTAAAAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	139946933	139947271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_139946900_139947300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027827	chrX	+	291	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	116324	88872	116324	-88872	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGTGCTTTTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	140374939	140382849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140375056_140382674
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027828	chrX	+	256	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	124063	88465	124063	-88465	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCCCAAACATCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	140382678	140383256	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140382849_140383170
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027829	chrX	+	249	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	135570	76112	135570	-76112	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGGATTAATATACTT	NA	NA	NA	NA	NA	NA	NA	NA	140394185	140395609	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140394242_140395416
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027830	chrX	+	280	3	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	140927	61864	140927	-61864	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGGGCCTCCAGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	140399542	140409857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140399641_140401113_140401265_140409826
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027831	chrX	+	283	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	151205	58587	151205	-58587	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGTAATGTTTAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	140409820	140413134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140409941_140412971
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027832	chrX	+	252	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	155644	56027	155644	-56027	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTGGATATATTCACA	NA	NA	NA	NA	NA	NA	NA	NA	140414259	140415694	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140414359_140415541
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027833	chrX	+	285	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	198032	12830	198032	-12830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAGAGCCCATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	140456647	140458891	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140456749_140458707
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027834	chrX	+	284	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	200092	5113	200092	-5113	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGCTTCAAGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	140458707	140466608	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140458921_140466537
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027835	chrX	+	294	2	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	207921	2507	207921	-2507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAAACACCCATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	140466536	140469214	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140466716_140469099
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027836	chrX	+	337	3	ISM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	210483	635	210483	-635	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCGATGTCAAGTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	140469098	140471086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140469215_140469561_140469735_140471038
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027837	chrX	+	263	1	ISM	ENSMUSG00000031274.17	ENSMUST00000112931.8	6536	53	213078	509	212843	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATACATGTGAGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	140471458	140471721	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_140471500_140471700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027838	chrX	+	2150	2	ISM	ENSMUSG00000042271.14	ENSMUST00000112913.2	2538	4	8103	20	8103	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCTGCATTTTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	141019801	141022668	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_141019925_141020641
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027839	chrX	+	2048	1	NIC	ENSMUSG00000042271.14	novel	2532	5	NA	NA	8942	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	141020640	141022688	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_141020600_141022700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027840	chrX	+	213	1	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAACAAAATACCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	141082035	141082248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Intergenic_chrX_+_141082000_141082200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027841	chrX	-	1322	1	ISM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	71030	0	71030	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	141102310	141100988	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_141101000_141102300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027842	chrX	-	1556	3	ISM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	61561	1333	61374	-1333	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAGTTAAAGGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	141111966	141102555	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_141103831_141110971_141111130_141111843
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027843	chrX	-	592	2	ISM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	38652	32820	38465	-32820	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAGAACACCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	141134875	141134042	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_141134134_141134374
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027844	chrX	+	1769	1	ISM	ENSMUSG00000047045.18	ENSMUST00000101198.9	4443	5	155055	0	10729	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTAGCATTTTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	141619465	141621234	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_141619500_141621200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027845	chrX	+	774	2	ISM	ENSMUSG00000031284.17	ENSMUST00000172330.3	8135	14	96022	5928	96022	50	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAACAAGTGCCGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	142572303	142574864	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_142572444_142574230
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027846	chrX	-	1586	1	ISM	ENSMUSG00000067276.6	ENSMUST00000087316.6	3561	13	23598	0	23598	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTGACTAGTTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	142586812	142585226	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_142585200_142586800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027847	chrX	+	1801	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	143100800	143108193	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027848	chrX	+	565	1	FSM	ENSMUSG00000081738.2	ENSMUST00000117548.2	636	1	71	0	71	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCTAGCGCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	144959008	144959573	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_144959000_144959600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027849	chrX	+	1169	4	ISM	ENSMUSG00000041380.14	ENST00000371950.3	4652	6	109922	2809	109413	-1252	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCGGCATACCAATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	145855431	145977458	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_145855484_145858726_145859044_145952565_145952672_145976764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027850	chrX	+	3619	4	ISM	ENSMUSG00000041380.14	ENST00000276198.6	4747	6	109940	436	109431	-436	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTCTTATGTCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	145855449	145979831	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_145855484_145858726_145859044_145952565_145952767_145976764
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027851	chrX	+	3131	1	ISM	ENSMUSG00000041380.14	ENSMUST00000036303.9	4747	6	231628	3	231118	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGACCTAGCTTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	145977136	145980267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_145977100_145980300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027852	chrX	-	1262	3	FSM	ENSMUSG00000041353.13	ENSMUST00000163233.2	1256	3	2	-8	2	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTTGAGAGGTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	149223899	149191571	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_149192597_149203337_149203438_149223762
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027853	chrX	-	460	1	ISM	ENSMUSG00000025269.17	ENSMUST00000112720.8	4742	7	20523	0	18760	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGATCAGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	149352317	149351857	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149351900_149352300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027854	chrX	+	541	4	ISM	ENSMUSG00000025271.14	ENST00000374992.6	1099	9	44975	-1	44975	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCCTGCCTGTAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	149422577	149426842	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_149422707_149424910_149424974_149426164_149426230_149426558
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027855	chrX	-	1568	1	Genic_Genomic	ENSMUSG00000025266.12	novel	NA	NA	NA	NA	18937	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGAGACTGTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	149767703	149766135	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_149766100_149767700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027856	chrX	-	491	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	9857	-1	9857	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGTACTTGACCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	149776783	149770833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149771058_149774131_149774260_149776644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027857	chrX	-	226	1	NIC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	15581	1	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGTACTTGACCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	149771059	149770833	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_149770800_149771100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027858	chrX	-	261	2	NNC	ENSMUSG00000025266.12	novel	1477	11	NA	NA	9857	-3297	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCTGCACATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	149776783	149774131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_149774254_149776644
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027859	chrX	-	410	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	9489	3297	9489	-3297	internal_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCTGCACATCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	149777151	149774131	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149774260_149776644_149776782_149777006
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027860	chrX	-	435	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	9222	5830	9222	-5830	internal_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGAAGACACCATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	149777418	149776664	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149776782_149777006_149777150_149777243
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027861	chrX	-	561	4	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	6313	6163	6313	-6163	internal_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGAGCAGGAGGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	149780327	149776997	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149777150_149777243_149777419_149778006_149778095_149780181
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027862	chrX	-	274	3	NNC	ENSMUSG00000025266.12	novel	1477	11	NA	NA	6362	-6491	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTAATTGCATCCATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	149780278	149777325	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_149777419_149778006_149778095_149780185
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027863	chrX	-	377	4	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	3838	6550	3838	-6550	internal_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCTGGATGCACCAGG	NA	NA	NA	NA	NA	NA	NA	NA	149782802	149777384	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149777419_149778006_149778095_149780181_149780327_149782692
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027864	chrX	-	391	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	2904	9346	2904	-9346	internal_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACTGGGTAAATTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	149783736	149780180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149780327_149782692_149782800_149783598
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027865	chrX	-	314	3	ISM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	2521	11873	2521	-11873	internal_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTCAAAAACTTGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	149784119	149782707	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149782800_149783598_149783735_149784033
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027866	chrX	-	447	4	ISM	ENSMUSG00000025266.12	ENST00000674311.1	1849	15	13575	12764	1	-12764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTTGAGAAGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	149786639	149783598	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149783735_149784033_149784118_149785169_149785287_149786529
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027867	chrX	-	361	4	ISM	ENSMUSG00000025266.12	ENST00000674311.1	1849	15	3125	14334	3125	-14334	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAAGCAGTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	149797089	149785168	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149785287_149786529_149786638_149787219_149787282_149797016
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027868	chrX	-	326	4	ISM	ENSMUSG00000025266.12	ENST00000674498.1	1815	15	0	15701	0	-15701	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGGTGAGCCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	149800293	149786535	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_149786638_149787219_149787282_149797016_149797086_149800200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027869	chrX	-	463	1	FSM	ENSMUSG00000083596.5	ENSMUST00000121545.2	483	1	20	0	20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACACAAAGAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	149998625	149998162	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_149998200_149998600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027870	chrX	+	1343	4	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	82077	14897	82077	-14897	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTTTAAAGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	150700320	150703181	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150700404_150700546_150700650_150701376_150701924_150702571
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027871	chrX	+	860	6	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	93513	2447	93513	-2447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGAGCTGCTCATATCA	NA	NA	NA	NA	NA	NA	NA	NA	150711756	150715631	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027872	chrX	+	977	3	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	97440	59	97440	-59	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTCCTTCAGTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	150715683	150718019	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150715727_150715935_150716127_150717276
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027873	chrX	+	806	1	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	99031	2	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTATTTAAAATGGG	NA	NA	NA	NA	NA	NA	NA	NA	150717274	150718080	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_150717300_150718100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027874	chrX	+	961	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	150784841	150787438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027875	chrX	+	680	4	FSM	ENSMUSG00000025260.11	ENST00000375298.4	682	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATTTGAAGGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	150785273	150787355	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_150785439_150786356_150786522_150786648_150786778_150787134
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027876	chrX	+	949	6	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	11374	28535	11374	-28535	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCACCCTCCCCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	150810797	150817155	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027877	chrX	+	1107	3	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	44562	29	44562	-29	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTATCTAATAAATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	150843985	150845661	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150844042_150844288_150844400_150844721
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027878	chrX	+	969	1	ISM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	45298	0	45298	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAGCTTCAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	150844721	150845690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150844700_150845700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027879	chrX	+	1450	3	ISM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	42	21018	8	9616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTTATGGAGGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	150927275	150987215	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150928176_150985903_150986166_150986927
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027880	chrX	+	838	2	FSM	ENSMUSG00000041115.17	ENST00000639161.2	837	2	-1	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTCTGATGTATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	150963988	150977599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_150964089_150976861
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027881	chrX	+	742	1	NIC	ENSMUSG00000041115.17	novel	837	2	NA	NA	12868	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTCTGATGTATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	150976857	150977599	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_150976900_150977600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027882	chrX	+	1553	3	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	23944	15578	21914	15055	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATAAGTATGTGCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	150985903	150992654	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150986166_150986927_150987330_150991765
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027883	chrX	+	1537	5	ISM	ENSMUSG00000041115.17	ENSMUST00000096275.5	5252	14	25111	11853	23081	-11852	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTACAGCCCCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	150987070	150996379	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027884	chrX	+	1705	4	ISM	ENSMUSG00000041115.17	ENSMUST00000112605.8	6017	15	75461	995	38739	-994	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGCAAGCTGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	151002728	151007237	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151002890_151004642_151004817_151005278_151005329_151005917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027885	chrX	+	1358	1	ISM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	79642	0	42886	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTCTGCCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	151006875	151008233	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151006900_151008200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027886	chrX	+	583	3	ISM	ENSMUSG00000025332.15	ENST00000452825.7	5409	24	414	31872	-119	-30103	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTTCTTTTCTTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	151016429	151025167	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151016707_151023021_151023193_151025032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027887	chrX	+	323	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	31	32527	31	-32527	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGTAAGAACAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	151016579	151022743	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151016707_151020628_151020707_151022625
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027888	chrX	+	373	3	ISM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	4079	32078	4079	-32078	internal_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATGCCAGGCAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	151020627	151023192	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151020707_151022625_151022749_151023021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027889	chrX	+	329	3	ISM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	6104	30176	6104	-30176	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTTCGACAGTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	151022652	151025094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151022749_151023021_151023193_151025032
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027890	chrX	+	399	3	ISM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	6504	27278	6504	-27278	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGTCTAAGATACTAGA	NA	NA	NA	NA	NA	NA	NA	NA	151023052	151027992	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151023193_151025032_151025168_151027868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027891	chrX	+	439	3	ISM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	8747	28506	8483	-26994	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGGACCCAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	151025031	151028276	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151025168_151027868_151027993_151028097
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027892	chrX	+	394	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	8514	26991	8514	-26991	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACCCAGCCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	151025062	151028279	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151025168_151027868_151027993_151028114
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027893	chrX	+	315	2	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	11577	25859	11577	-25859	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTTCCCAGTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	151028125	151029411	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151028280_151029250
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027894	chrX	+	438	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	12702	23454	12702	-23454	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGTGATTCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	151029250	151031816	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151029410_151031423_151031544_151031657
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027895	chrX	+	450	3	ISM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	14955	18681	14955	-18681	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTCCACTGGTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	151031503	151036589	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151031544_151031657_151031817_151036338
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027896	chrX	+	548	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	19788	10218	19788	-10218	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTGGAGTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	151036336	151045052	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151036602_151036694_151036858_151044932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027897	chrX	+	356	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	20269	9916	20269	-9916	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTGGTGCTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	151036817	151045354	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151036858_151044932_151045053_151045158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027898	chrX	+	504	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	28609	5332	28609	-5332	internal_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGACTGGGGCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	151045157	151049938	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151045354_151049552_151049735_151049812
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027899	chrX	+	381	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	33079	5043	33079	-5043	internal_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTGATGTGAGGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	151049627	151050227	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151049735_151049812_151049938_151050078
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027900	chrX	+	289	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	33278	4341	33278	-4341	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACGGGATTTTCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	151049826	151050929	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151049938_151050078_151050227_151050899
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027901	chrX	+	597	3	ISM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	33813	4660	33549	-3148	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCAACCCTTCCCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	151050097	151052122	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151050227_151050890_151050997_151051760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027902	chrX	+	288	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	33576	3421	33576	-3421	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAGAGAGGACAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	151050124	151051849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151050227_151050899_151050997_151051760
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027903	chrX	+	683	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	35210	1740	35210	-1740	internal_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCGAGCACTTTTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	151051758	151053530	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151052120_151052710_151052850_151053347
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027904	chrX	+	368	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	36251	1443	36251	-1443	internal_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGCTTAGCTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	151052799	151053827	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151052850_151053347_151053528_151053689
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027905	chrX	+	902	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	36799	679	36799	-679	internal_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCTTAGCCTAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	151053347	151054591	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151053528_151053689_151053828_151054007
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027906	chrX	+	853	3	ISM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	37728	1515	37464	-3	internal_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAAGGAGAGGAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	151054012	151055267	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151054590_151054855_151054935_151055070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027907	chrX	+	413	3	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	37898	0	37898	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAGAGGAGGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	151054446	151055270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151054590_151054855_151054926_151055070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027908	chrX	+	280	2	ISM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	38297	0	38297	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAGAGGAGGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	151054845	151055270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151054926_151055070
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027909	chrX	+	449	3	ISM	ENSMUSG00000025332.15	ENST00000452825.7	5409	24	38862	578	38329	-303	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTTCACACTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	151054877	151056461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151054926_151055070_151055213_151056202
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027910	chrX	+	204	1	NIC	ENSMUSG00000025332.15	novel	5409	24	NA	NA	38518	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGAGAGGAGGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	151055066	151055270	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_151055100_151055300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027911	chrX	+	835	2	ISM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	38784	445	38520	-427	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCTACTGGGGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	151055068	151056337	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151055271_151055704
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027912	chrX	-	433	2	Antisense	novelGene_ENSMUSG00000025332.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGGTAATATTGAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	151056529	151055102	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_-_151055217_151056210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027913	chrX	-	462	2	Antisense	novelGene_ENSMUSG00000025332.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGGGCTCGGGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	151056595	151055150	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_-_151055210_151056192
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027914	chrX	+	904	1	ISM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	39915	488	39591	4	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATCCTTCCTGGTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	151056139	151057043	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_151056100_151057000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027915	chrX	-	681	1	Genic_Genomic	ENSMUSG00000041096.14	novel	NA	NA	NA	NA	4891	1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGGAGTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	151120530	151119849	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_151119800_151120500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027916	chrX	+	786	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	3	-1	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGTCCAAATAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	152506588	152524261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027917	chrX	+	775	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGACCCCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	152506622	152512184	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_152506934_152508700_152508838_152511857
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027918	chrX	+	556	2	ISM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	2113	444	-110	212	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGAAGTGAGGGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	152508718	152524472	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_152508838_152524035
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027919	chrX	+	592	1	ISM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	17719	0	15496	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCATTCCAGAGTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	152524324	152524916	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_152524300_152524900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027920	chrX	+	604	2	FSM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	67	638	67	-492	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGCTCTAAGGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	152615355	152616601	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_152615545_152616186
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027921	chrX	+	539	2	FSM	ENSMUSG00000046550.9	ENST00000614076.1	537	2	-1	-1	-1	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGGAAACTACCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	152616252	152617094	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_152616408_152616710
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027922	chrX	+	559	1	ISM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	1392	0	427	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCATCTAAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	152616680	152617239	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_152616700_152617200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027923	chrX	+	697	2	FSM	ENSMUSG00000046550.9	ENST00000374908.1	1244	2	548	-1	548	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGTGCAAGTTTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	152616801	152617544	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_152617409_152617454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027924	chrX	+	578	2	NNC	ENSMUSG00000046550.9	novel	1244	2	NA	NA	668	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAGTGCAAGTTTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	152616921	152617543	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_152617411_152617454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027925	chrX	-	888	1	ISM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	9188	0	9188	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCTTTAGTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	153769658	153768770	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_153768800_153769700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027926	chrX	-	541	1	Genic_Genomic	ENSMUSG00000025283.16	novel	NA	NA	NA	NA	2629	1	mono-exon	FALSE	NA	NA	NA	NA	NA	616	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCATTTTTACTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	153996667	153996126	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_153996100_153996700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027927	chrX	-	915	5	FSM	ENSMUSG00000025283.16	ENST00000379254.5	815	5	14	-114	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	153999282	153996127	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998780_153998833_153999098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027928	chrX	-	1021	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	0	141	0	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATGATCTTACTATATA	NA	NA	NA	NA	NA	NA	NA	NA	153999445	153996268	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027929	chrX	+	544	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	0	24512	0	-20863	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGTATTATATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	154045438	154056138	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027930	chrX	+	342	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	7215	24234	-3312	-20585	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGGAGGTACTAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	154052653	154056416	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154052750_154054947_154054994_154055967_154056139_154056387
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027931	chrX	+	341	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	9507	15960	-1020	-12311	internal_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAGATCAGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	154054945	154064690	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154054994_154055967_154056139_154056387_154056426_154064606
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027932	chrX	+	343	4	ISM	ENSMUSG00000025287.16	ENST00000492081.1	496	5	58	11849	58	-11849	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTACCCGAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	154056023	154065152	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154056139_154056387_154056426_154064606_154064691_154065046
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027933	chrX	+	294	3	ISM	ENSMUSG00000025287.16	ENST00000492081.1	496	5	8639	-7	8639	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTAATTTTACTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	154064604	154077008	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154064691_154065046_154065151_154076904
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027934	chrX	+	363	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	19607	2379	9080	1270	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTAAGATTGTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	154065045	154078271	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154065151_154069284_154069362_154076904_154076973_154078158
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027935	chrX	+	320	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	23874	2142	13347	1507	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTAGAACTTTGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	154069312	154078508	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154069362_154076904_154076973_154078158_154078271_154078417
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027936	chrX	+	105	1	NIC	ENSMUSG00000025287.16	novel	1752	15	NA	NA	20937	6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATACTAATTTTACTATAG	NA	NA	NA	NA	NA	NA	NA	NA	154076902	154077007	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_+_154076900_154077000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027937	chrX	+	359	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	31465	1885	20938	1764	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTCGAGTTATGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	154076903	154078765	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154076973_154078158_154078271_154078417_154078509_154078678
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027938	chrX	+	528	5	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	32720	923	22193	-923	internal_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGTGATGATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	154078158	154079727	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027939	chrX	+	588	4	ISM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	33287	-1	22760	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTCCCATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154078725	154080651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_154078765_154079320_154079409_154079576_154079728_154080341
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027940	chrX	+	313	1	Genic_Genomic	ENSMUSG00000025287.16	novel	NA	NA	NA	NA	24373	1	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTCCCATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154080338	154080651	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_154080300_154080700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027941	chrX	-	278	1	ISM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	48155	0	48155	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCGTCTCCATTATGC	NA	NA	NA	NA	NA	NA	NA	NA	156227128	156226850	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_156226800_156227100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027942	chrX	-	291	2	ISM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	44831	2133	44831	-2133	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTTGATGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	156230452	156228983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_156229173_156230350
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027943	chrX	-	286	2	ISM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	30164	17353	30164	-17353	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAAACCAAAGATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	156245119	156244203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_156244327_156244956
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027944	chrX	-	374	2	ISM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	130	26133	130	-26133	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTGATCTCATGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	156275153	156252983	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_156253105_156274900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027945	chrX	+	796	5	FSM	ENSMUSG00000041476.13	ENST00000379494.4	845	5	49	0	49	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGAATCTTTATCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	156482210	156535587	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_156482310_156485951_156486009_156497582_156497670_156503926_156504080_156535187
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027946	chrX	-	1385	1	ISM	ENSMUSG00000025658.17	ENSMUST00000026750.15	5738	22	220340	134	173730	5	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAGTTATAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	156605950	156604565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_156604600_156606000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027947	chrX	-	2017	3	ISM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	189390	941	143091	-941	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAGTCATTCAGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	156636589	156605511	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_156606833_156609352_156609550_156636090
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027948	chrX	-	789	1	Genic_Genomic	ENSMUSG00000025658.17	novel	NA	NA	NA	NA	165630	9	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGACGCCAATTAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	156614050	156613261	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_156613300_156614000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027949	chrX	-	1841	3	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	140022	2602	140022	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGATCTTTTTAGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	156639658	156615872	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_156617070_156636090_156636632_156639555
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027950	chrX	-	600	1	ISM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	163127	2683	163127	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCAGTGTGTGGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	156616553	156615953	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_156616000_156616600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027951	chrX	+	363	3	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	17	12412	17	-12412	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTAAAGAGACTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	158155190	158160512	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_158155412_158159376_158159461_158160454
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027952	chrX	+	522	3	ISM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	7550	4175	7550	-4175	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATTCCAGTTGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	158162723	158168749	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_158162808_158165683_158165776_158168403
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027953	chrX	+	354	1	Genic_Genomic	ENSMUSG00000067194.7	novel	NA	NA	NA	NA	17399	2	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAGTTGTGGCCAACGT	NA	NA	NA	NA	NA	NA	NA	NA	158172572	158172926	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_158172600_158172900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027954	chrX	+	2587	4	ISM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	121357	355	121344	-355	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCGAGACACACAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	158744820	158758305	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_158744890_158749209_158749479_158754857_158754922_158756120
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027955	chrX	+	2193	1	ISM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	346206	2399	132997	6	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTCAAAGTTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	158756473	158758666	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_158756500_158758700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027956	chrX	+	2119	1	ISM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	348679	0	135470	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTAAGTCATTTATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	158758946	158761065	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_158758900_158761100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027957	chrX	-	301	1	Genic_Genomic	ENSMUSG00000031299.11	novel	NA	NA	NA	NA	15905	1	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTTGAGTTCCCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	158905504	158905203	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_158905200_158905500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027958	chrX	-	421	3	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	12154	-1488	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGGCTTGAAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	158909255	158906692	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_158906944_158907514_158907624_158909194
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027959	chrX	-	267	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	12150	1651	12150	-1651	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACATCTACAGCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	158909259	158906855	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_158906944_158907514_158907624_158909189
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027960	chrX	-	243	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	11058	2309	11058	-2309	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTGCTCTTGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	158910351	158907513	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_158907624_158909189_158909258_158910286
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027961	chrX	-	300	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	10681	3985	10681	-3985	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTCGTGAGCAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	158910728	158909189	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_158909258_158910286_158910359_158910568
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027962	chrX	-	331	3	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	9851	-5081	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGACTGGAAATCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	158911558	158910285	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_158910359_158910568_158910725_158911456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027963	chrX	-	199	2	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	9907	-5361	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCCTAGCTGCTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	158911502	158910565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_158910719_158911456
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027964	chrX	-	350	3	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	8910	-5361	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCCTAGCTGCTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	158912499	158910565	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_158910725_158911456_158911554_158912405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027965	chrX	-	316	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	8175	6255	8175	-6255	internal_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGCATCTCTGAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	158913234	158911459	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_158911554_158912405_158912498_158913104
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027966	chrX	-	391	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	6169	7205	6169	-7205	internal_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTAACTGAGGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	158915240	158912409	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_158912498_158913104_158913232_158915064
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027967	chrX	-	286	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	5180	7976	5180	-7976	internal_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGCCTATCGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	158916229	158913180	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_158913232_158915064_158915239_158916168
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027968	chrX	-	351	3	ISM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	24	9877	24	-9877	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTGATGGTCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	158921385	158915081	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_158915239_158916168_158916229_158921251
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027969	chrX	-	564	1	NIC	ENSMUSG00000062168.13	novel	2292	15	NA	NA	69902	1	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTGAATACTAAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	159406701	159406137	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_159406100_159406700
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027970	chrX	-	677	3	ISM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	67885	9	67885	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGGGATGAGGTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	159408718	159406147	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_159406700_159407559_159407639_159408672
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027971	chrX	-	1977	1	ISM	ENSMUSG00000059493.14	ENSMUST00000087085.10	8805	9	324458	0	91305	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAAGCTTTTCTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	160618268	160616291	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_160616300_160618300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027972	chrX	-	3397	3	ISM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	84454	2772	84454	744	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAACAGAAACAAGCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	160625119	160619066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_160620418_160622794_160622922_160623200
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027973	chrX	+	523	1	FSM	ENSMUSG00000059461.8	ENSMUST00000118642.2	387	1	-46	-90	-46	90	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTTAAAAGTAGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	161349806	161350329	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_161349800_161350300
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027974	chrX	+	819	5	ISM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	-56	4791	4	-4791	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTATGGTCTTTCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	161543401	161554100	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027975	chrX	+	758	6	ISM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	1221	2576	787	-2576	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTCATAGCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	161544678	161556315	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027976	chrX	+	731	6	ISM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	9304	1266	8870	-1266	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTAGGATCTGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	161552761	161557625	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027977	chrX	+	1114	6	ISM	ENSMUSG00000031353.14	ENST00000380084.8	2039	12	12385	-303	12385	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATCTGCATCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	161556276	161562091	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027978	chrX	+	756	1	Genic_Genomic	ENSMUSG00000031353.14	novel	NA	NA	NA	NA	17449	8	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATCATTTTTTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	161561340	161562096	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_161561300_161562100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027979	chrX	-	1162	3	ISM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	28514	-1	28514	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATAGAATGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	161642929	161640051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_161641005_161642294_161642443_161642868
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027980	chrX	-	956	1	Genic_Genomic	ENSMUSG00000031357.4	novel	NA	NA	NA	NA	30436	1	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTATAGAATGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	161641007	161640051	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_161640100_161641000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027981	chrX	+	762	2	ISM	ENSMUSG00000031360.15	ENSMUST00000112300.2	741	7	60660	-442	60660	442	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATATAGAATCATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	161812760	161814757	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_161812875_161814109
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027982	chrX	+	719	1	Genic_Genomic	ENSMUSG00000031360.15	novel	NA	NA	NA	NA	62686	1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCAGACTTGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	161814786	161815505	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_+_161814800_161815500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027983	chrX	+	1784	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	3	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGGTGTGCTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	162692140	162716357	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027984	chrX	+	1173	2	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	6371	388	6371	-388	internal_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCATGGTAGTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	162700695	162712050	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_162700840_162711021
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027985	chrX	+	1283	2	ISM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	16695	0	16695	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGTGAGGGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	162711019	162712438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_162712044_162712179
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027986	chrX	+	1507	1	ISM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	18895	0	16711	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	162711035	162712542	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_162711000_162712500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027987	chrX	-	321	1	ISM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	22826	0	18721	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTATTTCTTAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	162718759	162718438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_162718400_162718800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027988	chrX	-	236	1	ISM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	7977	0	3863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTTAAAAACTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	162733617	162733381	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_162733400_162733600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027989	chrX	-	2330	1	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	48846	0	48846	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGAAAAGAAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	162762147	162759817	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_162759800_162762100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027990	chrX	-	2477	2	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	40740	232	40740	-232	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACATTATAAATGCACA	NA	NA	NA	NA	NA	NA	NA	NA	162770253	162760049	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_162762367_162770093
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027991	chrX	-	1214	1	ISM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	4203	0	4203	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	162854914	162853700	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_162853700_162854900
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027992	chrX	-	812	2	ISM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	2782	761	2782	-761	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATTGTACAACTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	162856335	162854461	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_162855224_162856285
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027993	chrX	+	1121	4	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	7	7625	7	-7625	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGCATTTCCTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	163156344	163177576	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_163156916_163168814_163169026_163174597_163174789_163177428
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027994	chrX	+	298	2	ISM	ENSMUSG00000031380.11	ENSMUST00000033751.8	2049	7	447	16644	447	-16199	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGACACTGAAACACTAA	NA	NA	NA	NA	NA	NA	NA	NA	163156820	163169002	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_163156916_163168799
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027995	chrX	+	287	3	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	18372	6214	18336	-6214	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTTTTGCAAGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	163174709	163178987	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_163174789_163177428_163177578_163178928
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027996	chrX	+	297	2	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	22591	1347	22555	-1347	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAATGGTCTTTTCGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	163178928	163183854	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_163179030_163183658
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027997	chrX	+	297	2	ISM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	27416	3	27380	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCCACTACCCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	163183753	163185198	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_163183855_163185002
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027998	chrX	+	238	1	ISM	ENSMUSG00000031380.11	ENSMUST00000033751.8	2049	7	29035	0	29035	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCGTTATTTACTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	163185408	163185646	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_163185400_163185600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000027999	chrX	+	1124	7	FSM	ENSMUSG00000031382.15	ENST00000380470.7	1189	7	65	0	65	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCATTTCCTGGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	163220097	163242004	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_163220222_163228724_163228805_163233501_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028000	chrX	-	1549	1	NIC	ENSMUSG00000018589.9	novel	3150	9	NA	NA	196592	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCCAGAGTCTTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	163913561	163912012	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_163912000_163913600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028001	chrX	-	1723	3	ISM	ENSMUSG00000018589.9	ENSMUST00000058787.9	3150	9	74958	189	74722	-184	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTACCAGAGCTACGTG	NA	NA	NA	NA	NA	NA	NA	NA	164035431	163912201	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_163913559_163966568_163966719_164035215
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028002	chrX	-	424	3	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	72799	53447	72799	-53447	internal_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCAGCAGTGAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	164037354	163966647	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_163966719_164035215_164035431_164037216
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028003	chrX	-	666	4	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	45110	122010	45110	-122010	internal_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACTCACTTGGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	164065043	164035210	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_164035431_164037216_164037355_164040101_164040185_164064818
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028004	chrX	-	438	4	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	37644	124097	37644	-124097	internal_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGAAGGACTCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	164072509	164037297	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_164037355_164040101_164040185_164064818_164065043_164072435
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028005	chrX	-	458	4	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	2517	126958	2517	-126958	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCTGAAGAACTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	164107636	164040158	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_164040185_164064818_164065043_164072435_164072504_164107496
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028006	chrX	-	551	3	ISM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	4	159238	4	-159238	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGAGTGGGACTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	164110149	164072438	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_164072504_164107496_164107631_164109797
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028007	chrX	+	348	2	ISM	ENSMUSG00000040621.15	ENSMUST00000096252.10	1039	4	10257	290	10254	-274	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTTCCTAGCCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	164963744	164972526	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_164963806_164972239
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028008	chrX	+	371	1	ISM	ENSMUSG00000040621.15	ENSMUST00000130880.9	1389	5	18980	0	18939	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTAAGCCACGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	164972429	164972800	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_164972400_164972800
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028009	chrX	+	954	6	ISM	ENSMUSG00000031342.18	ENSMUST00000112223.8	4764	8	27946	3300	27946	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTATTTACTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	165155633	165168684	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_165155821_165158628_165158786_165162983_165163156_165165444_165165519_165166930_165166997_165168386
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028010	chrX	+	1296	4	FSM	ENSMUSG00000079317.11	ENSMUST00000112192.8	1294	4	0	-2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	165223771	165236136	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_165223836_165229786_165229899_165232783_165232900_165235132
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028011	chrX	-	1449	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	0	-2	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGCAATGCTTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	165262863	165240246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_165241340_165245310_165245339_165262535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028012	chrX	-	1421	2	NIC	ENSMUSG00000079316.11	novel	1447	3	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGCAATGCTTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	165262863	165240246	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NIC_chrX_-_165241340_165262535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028013	chrX	+	1437	2	Antisense	novelGene_ENSMUSG00000079316.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTAGGTCGGGGTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	165240248	165262863	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_+_165241342_165262519
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028014	chrX	+	1434	2	Antisense	novelGene_ENSMUSG00000079316.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGTAGGTCGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	165240248	165262859	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_+_165241366_165262542
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028015	chrX	-	1465	2	NNC	ENSMUSG00000079316.11	novel	1447	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGCAATGCTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	165262862	165240248	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_165241387_165262535
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028016	chrX	-	786	1	Antisense	novelGene_ENSMUSG00000067147.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGCTTGATGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	165637977	165637191	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Antisense_chrX_-_165637200_165638000
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028017	chrX	+	807	1	FSM	ENSMUSG00000067147.8	ENSMUST00000118791.2	801	1	53	-59	53	59	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAATATTTATCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	165637259	165638066	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_+_165637300_165638100
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028018	chrX	-	703	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112176.8	698	3	-1	-4	-1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTCTGCTTGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	165992146	165990086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_165990532_165990932_165991048_165992003
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028019	chrX	-	459	1	Genic_Genomic	ENSMUSG00000049775.17	novel	NA	NA	NA	NA	1278	2	mono-exon	FALSE	NA	NA	NA	NA	NA	1344	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTCTGCTTGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	165990545	165990086	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	Genic_Genomic_chrX_-_165990100_165990500
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028020	chrX	-	466	2	NNC	ENSMUSG00000049775.17	novel	768	3	NA	NA	856	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	165990967	165990088	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_-_165990520_165990932
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028021	chrX	-	722	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	0	46	0	-44	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATGCACAATTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	165992311	165990134	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrX_-_165990532_165990932_165991048_165992101
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028022	chrX	-	299	2	ISM	ENSMUSG00000025742.6	ENST00000380668.10	2294	8	34208	516	34208	-516	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGAATTTGAGAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	166131383	166129844	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_166129971_166131210
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028023	chrX	-	300	2	ISM	ENSMUSG00000025742.6	ENST00000398491.6	1217	7	31976	145	31976	-145	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGCAAAAGCATCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	166133615	166131799	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_166131995_166133510
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028024	chrX	-	1116	1	ISM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	7635	0	7635	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	168095641	168094525	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_168094500_168095600
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028025	chrX	-	1172	2	ISM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	6606	408	6606	-408	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGTGCTGAGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	168096670	168094933	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_-_168096019_168096583
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028026	chrX	+	799	2	ISM	ENSMUSG00000035299.17	ENST00000317552.9	2356	10	36	61719	20	-61719	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTCTGATTGAGCCAATC	NA	NA	NA	NA	NA	NA	NA	NA	168662637	168710480	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_168662906_168709949
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028027	chrX	+	817	3	ISM	ENSMUSG00000035299.17	ENST00000380780.5	2053	9	106	12172	106	-12172	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTTTCCTTGATAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	168710054	168760027	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_168710666_168749058_168749155_168759917
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028028	chrX	+	679	5	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	2510	3068	2510	-1473	internal_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTACTGGGAAGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	168764956	168770726	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_168765030_168766951_168767080_168767994_168768139_168768931_168769094_168770554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028029	chrX	+	860	4	ISM	ENSMUSG00000035299.17	ENSMUST00000079443.6	2815	7	5544	1594	5544	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGAGGGACCCGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	168767990	168772200	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrX_+_168768139_168768931_168769094_168770554_168770763_168771858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028030	chrX	+	582	3	NNC	ENSMUSG00000035299.17	novel	3194	10	NA	NA	7188	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGAGGGACCCGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	168769634	168772199	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrX_+_168769668_168770554_168770763_168771858
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028031	chrY	-	714	3	ISM	ENSMUSG00000069045.12	ENST00000360160.8	2218	15	18999	-2	18993	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTAATTGAATTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	1263949	1262942	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrY_-_1263368_1263569_1263701_1263791
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028032	chrY	+	552	2	ISM	ENSMUSG00000095134.3	ENSMUST00000167967.4	1248	7	9019	8	9019	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGAGGGACCCGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	90773344	90774746	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	ISM_chrY_+_90773556_90774405
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028033	chrY	+	1275	3	NNC	ENSMUSG00000096768.9	novel	1272	3	NA	NA	0	5933	intron_retention	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGCAGATGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	90796179	90833667	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrY_+_90797249_90804593_90804687_90833554
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028034	chrY	+	1275	3	FSM	ENSMUSG00000096768.9	ENSMUST00000238758.2	1272	3	0	-3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATATGCAGATGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	90796179	90827730	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	FSM_chrY_+_90797249_90804593_90804687_90827617
ONT_directRNA_Mouse_MpreCap_0+_Simul_Total_None.NAM_TM_000000028035	chrY	+	587	3	NNC	ENSMUSG00000096768.9	novel	696	4	NA	NA	46	5937	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGATGTGTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	90796900	90833671	mouse_simulation_dRNA_ONT	iso_detect_ref_crg_dRNA_ONT	NNC_chrY_+_90797249_90804564_90804687_90833554
